BLASTX nr result
ID: Rehmannia22_contig00010277
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00010277
(749 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006850268.1| hypothetical protein AMTR_s00020p00100020 [A... 121 2e-28
emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera] 125 1e-26
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ... 118 2e-24
ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago ... 112 5e-23
ref|XP_003588412.1| Ribosomal protein S10 [Medicago truncatula] ... 87 2e-22
emb|CBI40707.3| unnamed protein product [Vitis vinifera] 109 1e-21
emb|CBI31112.3| unnamed protein product [Vitis vinifera] 89 1e-15
ref|XP_006826457.1| hypothetical protein AMTR_s00004p00209040 [A... 42 1e-09
>ref|XP_006850268.1| hypothetical protein AMTR_s00020p00100020 [Amborella trichopoda]
gi|548853889|gb|ERN11849.1| hypothetical protein
AMTR_s00020p00100020 [Amborella trichopoda]
Length = 85
Score = 121 bits (304), Expect(2) = 2e-28
Identities = 57/67 (85%), Positives = 58/67 (86%)
Frame = +3
Query: 342 PVFWFPLGLPCSQVDPMAARKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGKPTHLSAP 521
PVFWFPLGLPCSQVDP A RKGDLVLYS DL PTEA KLPSCP+SHSVNRKGKPTH SAP
Sbjct: 5 PVFWFPLGLPCSQVDPNAVRKGDLVLYSDDLLPTEACKLPSCPKSHSVNRKGKPTHPSAP 64
Query: 522 LVDRCGF 542
LVD F
Sbjct: 65 LVDAVWF 71
Score = 31.6 bits (70), Expect(2) = 2e-28
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 539 FYEASKHSSLTLINQ 583
FYEASKHSSL LINQ
Sbjct: 71 FYEASKHSSLALINQ 85
>emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]
Length = 267
Score = 125 bits (315), Expect = 1e-26
Identities = 89/175 (50%), Positives = 94/175 (53%), Gaps = 3/175 (1%)
Frame = +2
Query: 92 RFAVAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASY--LLPISXXXXXXXX 265
RF AKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASY LL
Sbjct: 35 RFRRAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASYRKLLATRFYARAAAY 94
Query: 266 XXXXXXXXXXXXXFAFWIVFCPMRYPR-FLVPIGFTLFTGRPHGSKKRRSCAILR*SLSY 442
F + PM + LV LF P ++K SC
Sbjct: 95 PIGLEASYLSPISRPFNFLVDPMAARKGDLVLYSGDLF---PTEARKLPSC--------- 142
Query: 443 RGTQTPIVSQITFRESKGEAYXXXXXXXXXXXFYEASKHSSLTLINQEVCRHSLR 607
+QITFRESKGEAY FYEASKHSSL LINQE CRHSLR
Sbjct: 143 --------TQITFRESKGEAYSSISSSRRSVRFYEASKHSSLALINQEFCRHSLR 189
>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
gi|355477385|gb|AES58588.1| Ribosomal protein S10
[Medicago truncatula]
Length = 1152
Score = 118 bits (295), Expect = 2e-24
Identities = 72/127 (56%), Positives = 78/127 (61%), Gaps = 1/127 (0%)
Frame = -2
Query: 724 QKDCRLDAPTPPCLALYLKKKEEV*SVGKNARSV*YNR*P*GVAANLLIDQRE*TVLRRF 545
QKDCR +APTPPCLALYL + G AA I + T
Sbjct: 910 QKDCRQNAPTPPCLALYLTLRIR------------------GYAAWERIKEVSDTTGN-- 949
Query: 544 VKPHRSTRGADR*VGFPFRFTECDLGHDGSLRASVGKRSPEYSTRSP-FLAAMGSTCEQG 368
+K R + FPFRFTECDLGHDG LRASVGKRSPEYSTRSP FLAAMGSTC+QG
Sbjct: 950 LKEWRQS--------FPFRFTECDLGHDGGLRASVGKRSPEYSTRSPFFLAAMGSTCKQG 1001
Query: 367 KPNGNQK 347
KPNGNQK
Sbjct: 1002 KPNGNQK 1008
Score = 103 bits (258), Expect = 5e-20
Identities = 81/212 (38%), Positives = 96/212 (45%), Gaps = 14/212 (6%)
Frame = -3
Query: 666 RKRRYEAWERMQEVYDTTGNLKEWRQTS*LINVSELCLDAS*NRTDLREELIDE*ASPFD 487
R R Y AWER++EV DTTGNLKEWRQ + PF
Sbjct: 930 RIRGYAAWERIKEVSDTTGNLKEWRQ-----------------------------SFPFR 960
Query: 486 SRNV-IWDTMGVCVPR*ERDHRSIAQDRLFLLPWGRPVNKVNPMGTKKRG---YRIGQKT 319
+ G+ +R + FL G + P G +KR +G++
Sbjct: 961 FTECDLGHDGGLRASVGKRSPEYSTRSPFFLAAMGSTCKQGKPNGNQKREGTTLTLGRRR 1020
Query: 318 IQKAKAHPAKGRSFGSLPYYXXXXXXXXXKR*LASKPARPRGIKRSLPVLTWISGDGIRR 139
+K + K LASKPARPRGIKRSLPVLTWISGDG RR
Sbjct: 1021 SKKRRLTLLK----------------------LASKPARPRGIKRSLPVLTWISGDGKRR 1058
Query: 138 PEATSSRGR----------SLATAKRLPSAKE 73
PE TSSRGR SLATAKRLPSAK+
Sbjct: 1059 PEVTSSRGRSLALGDRLAVSLATAKRLPSAKD 1090
>ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago truncatula]
gi|355477358|gb|AES58561.1| hypothetical protein
MTR_1g005810 [Medicago truncatula]
Length = 146
Score = 112 bits (279), Expect(2) = 5e-23
Identities = 53/58 (91%), Positives = 54/58 (93%)
Frame = +3
Query: 399 RKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGKPTHLSAPLVDRCGFTKRLSTVHSR 572
+KGDLVLYSG FPTEARK PSCPRSHSVNRKGKPTH SAPLVDRCGFTKRLSTVHSR
Sbjct: 89 KKGDLVLYSGIFFPTEARKPPSCPRSHSVNRKGKPTHPSAPLVDRCGFTKRLSTVHSR 146
Score = 22.7 bits (47), Expect(2) = 5e-23
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 382 STPWQQEK 405
STPWQQEK
Sbjct: 82 STPWQQEK 89
Score = 89.0 bits (219), Expect = 2e-15
Identities = 49/61 (80%), Positives = 49/61 (80%), Gaps = 10/61 (16%)
Frame = +2
Query: 77 FALGKRFAVAKL----------RPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASY 226
FALGKRFAVAKL RPRLLV SGRL PSPEIQVSTGKDLLIPRGRAGLEASY
Sbjct: 20 FALGKRFAVAKLTASLSPRAKLRPRLLVTSGRLFPSPEIQVSTGKDLLIPRGRAGLEASY 79
Query: 227 L 229
L
Sbjct: 80 L 80
>ref|XP_003588412.1| Ribosomal protein S10 [Medicago truncatula]
gi|355477460|gb|AES58663.1| Ribosomal protein S10
[Medicago truncatula]
Length = 159
Score = 87.0 bits (214), Expect(3) = 2e-22
Identities = 47/60 (78%), Positives = 48/60 (80%), Gaps = 10/60 (16%)
Frame = -3
Query: 222 LASKPARPRGIKRSLPVLTWISGDGIRRPEATSSRGR----------SLATAKRLPSAKE 73
LASKPARPRGIKRSLPVLTWISGDG RRPE TSSRGR SLATAKRLPSAK+
Sbjct: 38 LASKPARPRGIKRSLPVLTWISGDGKRRPEVTSSRGRSLALGDRLAVSLATAKRLPSAKD 97
Score = 35.8 bits (81), Expect(3) = 2e-22
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -2
Query: 391 MGSTCEQGKPNGNQK 347
MGSTC+QGKPNGNQK
Sbjct: 1 MGSTCKQGKPNGNQK 15
Score = 30.0 bits (66), Expect(3) = 2e-22
Identities = 17/23 (73%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Frame = -1
Query: 350 KNGGTAL--GRRRSKKRRLTQLK 288
K GT L GRRRSKKRRLT LK
Sbjct: 15 KREGTTLTLGRRRSKKRRLTLLK 37
>emb|CBI40707.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 109 bits (272), Expect = 1e-21
Identities = 52/58 (89%), Positives = 52/58 (89%)
Frame = -2
Query: 505 VGFPFRFTECDLGHDGSLRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGVPH 332
VGF FRF ECDLGHDGSLRASVGKRS EYSTRSPFLA MGSTCEQGKPNGNQKTG H
Sbjct: 515 VGFLFRFIECDLGHDGSLRASVGKRSSEYSTRSPFLATMGSTCEQGKPNGNQKTGGYH 572
>emb|CBI31112.3| unnamed protein product [Vitis vinifera]
Length = 2099
Score = 89.4 bits (220), Expect = 1e-15
Identities = 67/165 (40%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Frame = -3
Query: 633 QEVYDTTGNLKEWRQTS*LINVSELCLDAS*NRTDLREELIDE*ASPFDSRNVIWDTMGV 454
++VYDTTGNLKEWR L AS + + + + +R+
Sbjct: 1761 RQVYDTTGNLKEWR------------LRAS----------VGKRSPEYSTRSP------- 1791
Query: 453 CVPR*ERDHRSIAQDRLFLLPWGRPVNKVNPMGTKKRG-YRIGQKTIQKAKAHPAKGRSF 277
FL G + P G +K G YRIGQKTIQKAKAHPA+GRSF
Sbjct: 1792 -----------------FLAAMGSTCEQGKPNGNQKMGGYRIGQKTIQKAKAHPAEGRSF 1834
Query: 276 GSLPYYXXXXXXXXXK-----R*LASKPARPRGIKRSLPVLTWIS 157
P R LASKPARPRGIKRSLPVLTWIS
Sbjct: 1835 DLTPLLLFKGERVVVDQADYRRQLASKPARPRGIKRSLPVLTWIS 1879
>ref|XP_006826457.1| hypothetical protein AMTR_s00004p00209040 [Amborella trichopoda]
gi|548830771|gb|ERM93694.1| hypothetical protein
AMTR_s00004p00209040 [Amborella trichopoda]
Length = 172
Score = 41.6 bits (96), Expect(3) = 1e-09
Identities = 28/53 (52%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Frame = -1
Query: 362 QWEPKNGGTALGRRRSKKRRLTQLKE-GALEAYLI--IKRGKGVR*ARGSLLP 213
+WE GTALGRRRSKKRRLT L E G E Y + G G+ +R LLP
Sbjct: 5 KWE----GTALGRRRSKKRRLTHLGEIGNREPYFFQADRLGPGIEVSRQKLLP 53
Score = 36.6 bits (83), Expect(3) = 1e-09
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -3
Query: 180 LPVLTWISGDGIRRPEA 130
+PVLTWISGDGIRRP A
Sbjct: 70 VPVLTWISGDGIRRPSA 86
Score = 30.8 bits (68), Expect(3) = 1e-09
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -2
Query: 229 EVACFQAGPAARNQ 188
+VACFQAGPAARN+
Sbjct: 54 QVACFQAGPAARNE 67