BLASTX nr result
ID: Rehmannia22_contig00010195
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00010195
(5158 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal doma... 1139 0.0
ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal doma... 1122 0.0
gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly... 1085 0.0
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma... 1081 0.0
emb|CBI35661.3| unnamed protein product [Vitis vinifera] 1063 0.0
gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-l... 1018 0.0
ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr... 1005 0.0
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu... 1001 0.0
ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus tric... 964 0.0
ref|XP_004492028.1| PREDICTED: RNA polymerase II C-terminal doma... 944 0.0
ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative ... 944 0.0
ref|XP_004492029.1| PREDICTED: RNA polymerase II C-terminal doma... 942 0.0
ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citr... 941 0.0
gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-l... 938 0.0
ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal doma... 936 0.0
ref|XP_003530482.2| PREDICTED: RNA polymerase II C-terminal doma... 935 0.0
ref|XP_006603006.1| PREDICTED: RNA polymerase II C-terminal doma... 932 0.0
ref|XP_002304714.2| hypothetical protein POPTR_0003s16280g [Popu... 919 0.0
gb|ESW11309.1| hypothetical protein PHAVU_008G019000g [Phaseolus... 917 0.0
ref|NP_180912.2| RNA polymerase II C-terminal domain phosphatase... 883 0.0
>ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Solanum tuberosum]
Length = 1218
Score = 1139 bits (2945), Expect = 0.0
Identities = 655/1279 (51%), Positives = 815/1279 (63%), Gaps = 63/1279 (4%)
Frame = +1
Query: 574 VHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXXA 753
V DVEEGEISDSASVEEI+E+AF+ +
Sbjct: 7 VEDVEEGEISDSASVEEISEDAFNRQDPPTTTKIKIASNENQNQNSTTT----------T 56
Query: 754 RVWTMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXX 933
RVWTMRD YKY I S+ GLYNLAWAQAV NKPL ++FVM D++
Sbjct: 57 RVWTMRDAYKYPI-SRDYARGLYNLAWAQAVQNKPLDELFVMTSDNSNQCA--------- 106
Query: 934 XXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGGDVN---- 1101
N ++NVE K + DV+
Sbjct: 107 ---------------------------------------NANANVESKVIIDVDVDDDAK 127
Query: 1102 ---ELDERERS-----------KRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQK 1239
EL+E E K N ++E+L+S+ + + KS+ +CS L+T+ ++L +
Sbjct: 128 EEGELEEGEIDLDAADLVLNFGKEANFVREQLQSVTLDETHKSFSMVCSKLQTSLLALGE 187
Query: 1240 MVLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSS 1419
+ L S + D L+QL +TA++T+ S+F SM+ ++QN IL RL+ + P L SS
Sbjct: 188 LAL--SQDKNDILIQLFMTALRTINSVFYSMNQDQKQQNTDILSRLLFHAKTQLPALLSS 245
Query: 1420 LQLEEVEAIRSSLQSPA---DSLSNDNSNGRKQVGTTDL---HVLLENTNNDSACLTKCG 1581
QL+EV+A+ S+ A ++ ND NG K V D H EN N D + K
Sbjct: 246 EQLKEVDAVILSINQSAVFSNTQDNDKVNGIKVVELLDKKVSHKSSENANQDFTAVNKYD 305
Query: 1582 IESGSAGSLDQTQRNFSLQYSKSGLVNSKQKGVALPLLDLHKDHDADSLPSPTRDLSTPL 1761
+ + S S +++ S + K GL NSK KG+++PLLDLHKDHD D+LPSPTR++
Sbjct: 306 LGAVSIKSSGLKEQSVSFESVKPGLANSKAKGLSIPLLDLHKDHDEDTLPSPTREIGPQF 365
Query: 1762 PFE-----HGLLKPEWPIPRRTLDRENPVMHPYETDAVKAVSSYQQKFGRSSFFMSDNLP 1926
P HG++K + PI +L++ N ++HPYETDA+KAVSSYQQKFGRSS F+S+NLP
Sbjct: 366 PVAKATQAHGMVKLDLPIFAGSLEKGNSLLHPYETDALKAVSSYQQKFGRSSLFVSENLP 425
Query: 1927 SPTPSEEGDTTGDXXXXXXXXXXXXHTG--VNTLISGQPMVSSTSPMEALAGPEISDSRI 2100
SPTPSEEGD+ H +N GQP++SS L G + +R
Sbjct: 426 SPTPSEEGDSGKGDIGGEVTSLDVVHNASHLNESSMGQPILSSVPQTNILDGQGLGTART 485
Query: 2101 AVPVSSFGNPVLKSSSAKSRDPRLRLANLDAGARSQSPSF--VGSVESKLEY-FGMMSTR 2271
A P+S NP L+SS+AKSRDPRLRLA DA A++ + + + ++ KLE M+ ++
Sbjct: 486 ADPLSFLPNPSLRSSTAKSRDPRLRLATSDAVAQNTNKNILPIPDIDLKLEASLEMIGSK 545
Query: 2272 KPKTAEERVSDGPALKRQRNELSD--------PKTT------------MPIISATSAPQV 2391
K KT + V P KRQR+E +D P T +PI S+ A
Sbjct: 546 KQKTVDLPVFGAPLPKRQRSEQTDSIIVSDVRPSTGNGGWLEDRGTAGLPITSSNCATDS 605
Query: 2392 T------IPTTTLSVSSPMTSPLTSKIEKLPEKKSNTTSSLHSLLRDIAVNPSIWMNILK 2553
+ + T ++++ + S + + E P +T+++LHSLL+DIA+NPSIWMNI+K
Sbjct: 606 SDNDIRKLEQVTATIAT-IPSVIVNAAENFPVTGISTSTTLHSLLKDIAINPSIWMNIIK 664
Query: 2554 MEHVKSSDDIKSMT-QMPNSYSLLGAVPSTIAVPPSSSMLGQMSAGIVQSPSQAVSTEEP 2730
ME KS+D ++ T Q +S S+LGAVPST A+ P SS +GQ S GI+Q+P+ S +E
Sbjct: 665 MEQQKSADASRTTTAQASSSKSILGAVPSTDAIAPRSSAIGQRSVGILQTPTHTASADEV 724
Query: 2731 GKVRMKPRDPRRILHNCAPQKGVTTASDQPKINASFSSAMMCSLSTARHEDQLEXXXXXX 2910
VRMKPRDPRR+LHN A KG SDQ K + + A + +L EDQL+
Sbjct: 725 AIVRMKPRDPRRVLHNTAVLKGGNVGSDQCKTGVAGTHATISNLGFQSQEDQLDRKSAVT 784
Query: 2911 XXXXPPDITMQFTSNLRNIADIMSVSQECMPSSVLPQIPSLQP--VQVHQAGMETKGVVA 3084
PPDI QFT NL+NIAD++SVS PS+ L Q +Q HQ+ E K V+
Sbjct: 785 LSTTPPDIARQFTKNLKNIADMISVS----PSTSLSAASQTQTQCLQSHQSRSEGKEAVS 840
Query: 3085 DSGNPINGCDLTSEAAIAGPPRPLNANAWSDVEHLFEGFDDKQKAAIQRERARRLEEQKK 3264
+ +N L SE G +P +W DVEHLFEG+ D+Q+A IQRERARRLEEQKK
Sbjct: 841 EPSERVNDAGLASEKGSPGSLQP--QISWGDVEHLFEGYSDQQRADIQRERARRLEEQKK 898
Query: 3265 MFAVRKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFPHMGMWTK 3444
MF+VRK NSAKFVE+DP+H+E+LRKKEEQDREKP RHLFRFPHMGMWTK
Sbjct: 899 MFSVRKLCLVLDLDHTLLNSAKFVEIDPVHEEILRKKEEQDREKPCRHLFRFPHMGMWTK 958
Query: 3445 LRPGIWNFLEKASKLFELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDGD 3624
LRPGIWNFLEKAS LFELHLYTMGNK YATEMAKLLDPKG+LF+GRVISRGDDG+PFDGD
Sbjct: 959 LRPGIWNFLEKASNLFELHLYTMGNKLYATEMAKLLDPKGDLFAGRVISRGDDGDPFDGD 1018
Query: 3625 DRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLL 3804
+RVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLL
Sbjct: 1019 ERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLL 1078
Query: 3805 EIDHDERPEDGTLASSLAVIERIHQNFFAHQSLDEADVRNILASEQRKILAGCRIVFSRV 3984
EIDHDERPEDGTLAS L VI+RIHQNFFAH+S+DEADVRNILA+EQ+KILAGCRIVFSRV
Sbjct: 1079 EIDHDERPEDGTLASCLGVIQRIHQNFFAHRSIDEADVRNILATEQKKILAGCRIVFSRV 1138
Query: 3985 FPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTHVVANSLGTDKVNWALSRGKFVVHPGW 4164
FPVGEA PH+HPLWQTAEQFGAVC +QID+ VTHVVANSLGTDKVNWALS G+FVVHPGW
Sbjct: 1139 FPVGEANPHLHPLWQTAEQFGAVCTSQIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGW 1198
Query: 4165 VEASALLYRRANELDFAIK 4221
VEASALLYRRANE DFAIK
Sbjct: 1199 VEASALLYRRANEHDFAIK 1217
>ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Solanum lycopersicum]
Length = 1211
Score = 1122 bits (2903), Expect = 0.0
Identities = 644/1270 (50%), Positives = 802/1270 (63%), Gaps = 54/1270 (4%)
Frame = +1
Query: 574 VHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXXA 753
V D EEGEISDSASVEEI+E+AF+ + +
Sbjct: 7 VEDAEEGEISDSASVEEISEDAFNRQDPPTT-------STTSKIKIASNENQNQNSTTAT 59
Query: 754 RVWTMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXX 933
RVWTMRD+YKY I S+ GLYNLAWAQAV NKPL ++FVM D++
Sbjct: 60 RVWTMRDVYKYPI-SRDYARGLYNLAWAQAVQNKPLDELFVMTSDNSNQCA--------- 109
Query: 934 XXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGGDVNELDE 1113
N +S V + +V D E E
Sbjct: 110 ---------------------------------------NGESKVIIDVDVDDDAKEEGE 130
Query: 1114 RERS--------------KRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKMVLE 1251
E K N I+E+L+S+ + + KS+ +CS L+T+ ++L ++ L
Sbjct: 131 LEEGEIDLDSADLVVNFGKEANFIREQLQSVTLDETHKSFSMVCSKLQTSLLALGELAL- 189
Query: 1252 GSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLE 1431
S + D L+QL +TA++T+ S+F SM+ ++QN IL RL+ + P L SS QL+
Sbjct: 190 -SQDKNDILIQLFMTALRTINSVFYSMNDHQKQQNTDILSRLLFNAKTQLPALLSSEQLK 248
Query: 1432 EVEAIRSSLQSP---ADSLSNDNSNGRKQVGTTDL---HVLLENTNNDSACLTKCGIESG 1593
E++A+ S+ +++ ND NG V D+ H EN N D + K +
Sbjct: 249 ELDALILSINHSLVSSNTQDNDTVNGINVVQLLDMKDSHKSSENANQDFTSVNKYDLGDV 308
Query: 1594 SAGSLDQTQRNFSLQYSKSGLVNSKQKGVALPLLDLHKDHDADSLPSPTRDLSTPLPFE- 1770
S S +++ S + K GL NSK KG++ PLLDLHKDHD D+LPSPTR + P
Sbjct: 309 SIKSSGLKEQSVSSESVKPGLDNSKAKGLSFPLLDLHKDHDEDTLPSPTRQIGPQFPATQ 368
Query: 1771 -HGLLKPEWPIPRRTLDRENPVMHPYETDAVKAVSSYQQKFGRSSFFMSDNLPSPTPSEE 1947
HG++K + PI +LD+ N ++HPYETDA+KAVSSYQQKFGRSS F+S+NLPSPTPSEE
Sbjct: 369 THGMVKLDLPIFPASLDKGNSLLHPYETDALKAVSSYQQKFGRSSLFVSENLPSPTPSEE 428
Query: 1948 GDTTGDXXXXXXXXXXXXHTG--VNTLISGQPMVSSTSPMEALAGPEISDSRIAVPVSSF 2121
D+ H +N GQP++SS L G + +R A P+S
Sbjct: 429 DDSGKGDTGGEVTSFDVVHNASHLNESSMGQPILSSVPQTNILDGQGLGTTRTADPLSFL 488
Query: 2122 GNPVLKSSSAKSRDPRLRLANLDAGARSQS---PSFVGSVESKLEYFGMMSTRKPKTAEE 2292
NP L+SS+AKSRDPRLRLA D A++ P +E+ LE M+ ++K KT +
Sbjct: 489 PNPSLRSSTAKSRDPRLRLATSDTVAQNTILPIPDIDLKLEASLE---MIVSKKQKTVDL 545
Query: 2293 RVSDGPALKRQRNELSDP--------------------KTTMPIISATSAPQVT------ 2394
D P KRQR+E +D +PI S+ A +
Sbjct: 546 SAFDAPLPKRQRSEQTDSIIVSDVRPSIGNGGWLEDRGTAELPITSSNCATYNSDNDIRK 605
Query: 2395 IPTTTLSVSSPMTSPLTSKIEKLPEKKSNTTSSLHSLLRDIAVNPSIWMNILKMEHVKSS 2574
+ T ++++ + S + + E P +T+++LHSLL+DIA+NPSIWMNI+K E KS+
Sbjct: 606 LEQVTATIAT-IPSVIVNAAENFPVTGISTSTTLHSLLKDIAINPSIWMNIIKTEQQKSA 664
Query: 2575 DDIKSMT-QMPNSYSLLGAVPSTIAVPPSSSMLGQMSAGIVQSPSQAVSTEEPGKVRMKP 2751
D ++ T Q +S S+LGAVPST+AV P SS +GQ S GI+Q+P+ S +E VRMKP
Sbjct: 665 DASRTNTAQASSSKSILGAVPSTVAVAPRSSAIGQRSVGILQTPTHTASADEVAIVRMKP 724
Query: 2752 RDPRRILHNCAPQKGVTTASDQPKINASFSSAMMCSLSTARHEDQLEXXXXXXXXXXPPD 2931
RDPRR+LH+ A KG + DQ K + + A + +LS EDQL+ PPD
Sbjct: 725 RDPRRVLHSTAVLKGGSVGLDQCKTGVAGTHATISNLSFQSQEDQLDRKSAVTLSTTPPD 784
Query: 2932 ITMQFTSNLRNIADIMSVSQECMPSSVLPQIPSLQPVQVHQAGMETKGVVADSGNPINGC 3111
I QFT NL+NIAD++SVS PS V Q +L +Q +Q+ E KG V++ +N
Sbjct: 785 IACQFTKNLKNIADMISVSPSTSPS-VASQTQTLC-IQAYQSRSEVKGAVSEPSEWVNDA 842
Query: 3112 DLTSEAAIAGPPRPLNANAWSDVEHLFEGFDDKQKAAIQRERARRLEEQKKMFAVRKXXX 3291
L SE G +P +W DVEHLFEG+ D+Q+A IQRER RRLEEQKKMF+VRK
Sbjct: 843 GLASEKGSPGSLQP--QISWGDVEHLFEGYSDQQRADIQRERTRRLEEQKKMFSVRKLCL 900
Query: 3292 XXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFPHMGMWTKLRPGIWNFL 3471
NSAKFVE+DP+H+E+LRKKEEQDREKP RHLFRFPHMGMWTKLRPGIWNFL
Sbjct: 901 VLDLDHTLLNSAKFVEIDPVHEEILRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFL 960
Query: 3472 EKASKLFELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDGDDRVPKSKDL 3651
EKAS LFELHLYTMGNK YATEMAKLLDPKG+LF+GRVISRGDDG+PFDGD+RVPKSKDL
Sbjct: 961 EKASNLFELHLYTMGNKLYATEMAKLLDPKGDLFAGRVISRGDDGDPFDGDERVPKSKDL 1020
Query: 3652 EGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPE 3831
EGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPE
Sbjct: 1021 EGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPE 1080
Query: 3832 DGTLASSLAVIERIHQNFFAHQSLDEADVRNILASEQRKILAGCRIVFSRVFPVGEAKPH 4011
DGTLAS L VI+RIHQNFF H+S+DEADVRNILA+EQ+KILAGCRIVFSRVFPVGEA PH
Sbjct: 1081 DGTLASCLGVIQRIHQNFFTHRSIDEADVRNILATEQKKILAGCRIVFSRVFPVGEASPH 1140
Query: 4012 MHPLWQTAEQFGAVCINQIDEHVTHVVANSLGTDKVNWALSRGKFVVHPGWVEASALLYR 4191
+HPLWQTAEQFGAVC +QID+ VTHVVANSLGTDKVNWALS G+ VVHPGWVEASALLYR
Sbjct: 1141 LHPLWQTAEQFGAVCTSQIDDQVTHVVANSLGTDKVNWALSTGRSVVHPGWVEASALLYR 1200
Query: 4192 RANELDFAIK 4221
RANE DFAIK
Sbjct: 1201 RANEHDFAIK 1210
>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
Length = 1227
Score = 1085 bits (2806), Expect = 0.0
Identities = 637/1305 (48%), Positives = 795/1305 (60%), Gaps = 89/1305 (6%)
Frame = +1
Query: 574 VHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXXA 753
V D EEGEISDSASVEEI+E+AF+ + +
Sbjct: 7 VEDAEEGEISDSASVEEISEDAFNRQDPPTT-------STTSKIKIASNENQNQNSTTAT 59
Query: 754 RVWTMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXX 933
RVWTMRD+YKY I S+ GLYNLAWAQAV NKPL ++FVM D++
Sbjct: 60 RVWTMRDVYKYPI-SRDYARGLYNLAWAQAVQNKPLDELFVMTSDNSNQCA--------- 109
Query: 934 XXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGGDVNELDE 1113
N +S V + +V D E E
Sbjct: 110 ---------------------------------------NGESKVIIDVDVDDDAKEEGE 130
Query: 1114 RERS--------------KRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKMVLE 1251
E K N I+E+L+S+ + + KS+ +CS L+T+ ++L ++ L
Sbjct: 131 LEEGEIDLDSADLVVNFGKEANFIREQLQSVTLDETHKSFSMVCSKLQTSLLALGELAL- 189
Query: 1252 GSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLE 1431
S + D L+QL +TA++T+ S+F SM+ ++QN IL RL+ + P L SS QL+
Sbjct: 190 -SQDKNDILIQLFMTALRTINSVFYSMNDHQKQQNTDILSRLLFNAKTQLPALLSSEQLK 248
Query: 1432 EVEAIRSSLQSP---ADSLSNDNSNGRKQVGTTDL---HVLLENTNNDSACLTKCGIESG 1593
E++A+ S+ +++ ND NG V D+ H EN N D + K +
Sbjct: 249 ELDALILSINHSLVSSNTQDNDTVNGINVVQLLDMKDSHKSSENANQDFTSVNKYDLGDV 308
Query: 1594 SAGSLDQTQRNFSLQYSKSGLVNSKQKGVALPLLDLHKDHDADSLPSPTRDLSTPLPFE- 1770
S S +++ S + K GL NSK KG++ PLLDLHKDHD D+LPSPTR + P
Sbjct: 309 SIKSSGLKEQSVSSESVKPGLDNSKAKGLSFPLLDLHKDHDEDTLPSPTRQIGPQFPATQ 368
Query: 1771 -HGLLKPEWPIPRRTLDRENPVMHPYETDAVKAVSSYQQKFGRSSFFMSDNLPSPTPSEE 1947
HG++K + PI +LD+ N ++HPYETDA+KAVSSYQQKFGRSS F+S+NLPSPTPSEE
Sbjct: 369 THGMVKLDLPIFPASLDKGNSLLHPYETDALKAVSSYQQKFGRSSLFVSENLPSPTPSEE 428
Query: 1948 GDTTGDXXXXXXXXXXXXHTG--VNTLISGQPMVSSTSPMEALAGPEISDSRIAVPVSSF 2121
D+ H +N GQP++SS L G + +R A P+S
Sbjct: 429 DDSGKGDTGGEVTSFDVVHNASHLNESSMGQPILSSVPQTNILDGQGLGTTRTADPLSFL 488
Query: 2122 GNPVLKSSSAKSRDPRLRLANLDAGARSQS---PSFVGSVESKLEYFGMMSTRKPKTAEE 2292
NP L+SS+AKSRDPRLRLA D A++ P +E+ LE M+ ++K KT +
Sbjct: 489 PNPSLRSSTAKSRDPRLRLATSDTVAQNTILPIPDIDLKLEASLE---MIVSKKQKTVDL 545
Query: 2293 RVSDGPALKRQRNELSDP--------------------KTTMPIISATSAPQVT------ 2394
D P KRQR+E +D +PI S+ A +
Sbjct: 546 SAFDAPLPKRQRSEQTDSIIVSDVRPSIGNGGWLEDRGTAELPITSSNCATYNSDNDIRK 605
Query: 2395 IPTTTLSVSSPMTSPLTSKIEKLPEKKSNTTSSLHSLLRDIAVNPSIWMNILKMEHVKSS 2574
+ T ++++ + S + + E P +T+++LHSLL+DIA+NPSIWMNI+K E KS+
Sbjct: 606 LEQVTATIAT-IPSVIVNAAENFPVTGISTSTTLHSLLKDIAINPSIWMNIIKTEQQKSA 664
Query: 2575 DDIKSMT-QMPNSYSLLGAVPSTIAVPPSSSMLGQMSAGIVQSPSQAVST---------- 2721
D ++ T Q +S S+LGAVPST+AV P SS +GQ S GI+Q+P+ S
Sbjct: 665 DASRTNTAQASSSKSILGAVPSTVAVAPRSSAIGQRSVGILQTPTHTASAASSIYNLLMN 724
Query: 2722 -------------------------EEPGKVRMKPRDPRRILHNCAPQKGVTTASDQPKI 2826
+E VRMKPRDPRR+LH+ A KG + DQ K
Sbjct: 725 DFIYSVIFTASIAQFPFYFFLTFSRDEVAIVRMKPRDPRRVLHSTAVLKGGSVGLDQCKT 784
Query: 2827 NASFSSAMMCSLSTARHEDQLEXXXXXXXXXXPPDITMQFTSNLRNIADIMSVSQECMPS 3006
+ + A + +LS EDQL+ PPDI QFT NL+NIAD++SVS PS
Sbjct: 785 GVAGTHATISNLSFQSQEDQLDRKSAVTLSTTPPDIACQFTKNLKNIADMISVSPSTSPS 844
Query: 3007 SVLPQIPSLQPVQVHQAGMETKGVVADSGNPINGCDLTSEAAIAGPPRPLNANAWSDVEH 3186
V Q +L +Q +Q+ E KG V++ +N L SE G +P +W DVEH
Sbjct: 845 -VASQTQTLC-IQAYQSRSEVKGAVSEPSEWVNDAGLASEKGSPGSLQP--QISWGDVEH 900
Query: 3187 LFEGFDDKQKAAIQRERARRLEEQKKMFAVRKXXXXXXXXXXXXNSAKFVEVDPLHDEML 3366
LFEG+ D+Q+A IQRER RRLEEQKKMF+ FVE+DP+H+E+L
Sbjct: 901 LFEGYSDQQRADIQRERTRRLEEQKKMFS-------------------FVEIDPVHEEIL 941
Query: 3367 RKKEEQDREKPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLFELHLYTMGNKYYATEMAK 3546
RKKEEQDREKP RHLFRFPHMGMWTKLRPGIWNFLEKAS LFELHLYTMGNK YATEMAK
Sbjct: 942 RKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASNLFELHLYTMGNKLYATEMAK 1001
Query: 3547 LLDPKGELFSGRVISRGDDGEPFDGDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKL 3726
LLDPKG+LF+GRVISRGDDG+PFDGD+RVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKL
Sbjct: 1002 LLDPKGDLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKL 1061
Query: 3727 NLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFAHQSLD 3906
NLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLAS L VI+RIHQNFF H+S+D
Sbjct: 1062 NLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASCLGVIQRIHQNFFTHRSID 1121
Query: 3907 EADVRNILASEQRKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTH 4086
EADVRNILA+EQ+KILAGCRIVFSRVFPVGEA PH+HPLWQTAEQFGAVC +QID+ VTH
Sbjct: 1122 EADVRNILATEQKKILAGCRIVFSRVFPVGEASPHLHPLWQTAEQFGAVCTSQIDDQVTH 1181
Query: 4087 VVANSLGTDKVNWALSRGKFVVHPGWVEASALLYRRANELDFAIK 4221
VVANSLGTDKVNWALS G+ VVHPGWVEASALLYRRANE DFAIK
Sbjct: 1182 VVANSLGTDKVNWALSTGRSVVHPGWVEASALLYRRANEHDFAIK 1226
>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Vitis vinifera]
Length = 1238
Score = 1081 bits (2795), Expect = 0.0
Identities = 654/1283 (50%), Positives = 789/1283 (61%), Gaps = 58/1283 (4%)
Frame = +1
Query: 547 KEQQLVKVEVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXX 726
+++ + + + DVEEGEISDSASVEEI+EE F+ ++ +
Sbjct: 3 EKENNIMMGIEDVEEGEISDSASVEEISEEDFNKQEVRVLREAKPKADT----------- 51
Query: 727 XXXXXXXXARVWTMRDL---YKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTX 897
RVWTMRDL YKY A LYNLAWAQAV NKPL D+FVM ++++
Sbjct: 52 ---------RVWTMRDLQDLYKYHQACSGYTPRLYNLAWAQAVQNKPLNDIFVMDDEESK 102
Query: 898 XXXXXXXXXXXXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVK 1077
+I + DS +VK
Sbjct: 103 RSSSSSNTSRDDSSSAKEVAKVIIDDSGDEMDVKMDDVSEKEEGELEEGEIDLDSEPDVK 162
Query: 1078 NEVGG-DVNE----LDERERSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKM 1242
+E G DVNE L ERE +RV I+E+LES+ V +A+KS+ +CS L+ T SLQK+
Sbjct: 163 DEGGVLDVNEPEIDLKERELVERVKSIQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKV 222
Query: 1243 -----VLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPP 1407
V E S KD L Q L+ AI+ L +F SM+ +E NK + RL++ V P
Sbjct: 223 FGEKVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSP 282
Query: 1408 LFSSLQLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTD------LHVLLENTNNDSACL 1569
+FS ++EVE + S L +PA S + S+ V TD L +E++ A
Sbjct: 283 IFSIQHIKEVEVMMSFLDTPAAQSSAEASDKVNDVQVTDGMNRNILDSSVESSGRAFASA 342
Query: 1570 TKCGIESGSAGSLDQTQRNFSLQYSKSGLVNSKQKGVALPLLDLHKDHDADSLPSPTRDL 1749
K ++S S S +Q + K GL +S+ + + PLLDLHKDHD DSLPSPT
Sbjct: 343 KKLSLDSISVESYNQNNPDAL----KPGLSSSRGRFIFGPLLDLHKDHDEDSLPSPTGKA 398
Query: 1750 STPLPFEHGLLKPEWPIPRRTLDRENPVMHPYETDAVKAVSSYQQKFGRSSFFMSDNLPS 1929
P K E + + ++ +MHPYETDA+KAVS+YQQKFG +SF D LPS
Sbjct: 399 PQCFPVN----KSELVTAKVAHETQDSIMHPYETDALKAVSTYQQKFGLTSFLPIDKLPS 454
Query: 1930 PTPSEE-GDTTGDXXXXXXXXXXXXHT-GVNTLISGQPMVSSTSPMEA--LAGPEISDSR 2097
PTPSEE GDT GD N G P+VSS M++ + GP + +
Sbjct: 455 PTPSEESGDTYGDISGEVSSSSTISAPITANAPALGHPIVSSAPQMDSSIVQGPTVGRNT 514
Query: 2098 IAVPVSSFGNPVLKSS---SAKSRDPRLRLANLDAGAR--SQSPSFVGSVESKLEYFG-M 2259
V P L SS SAKSRDPRLRLA+ DAG+ ++ P S K++ G +
Sbjct: 515 SLVS----SGPHLDSSVVASAKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEI 570
Query: 2260 MSTRKPKTAEERVSDGPALKRQRNELSDPKTTMPII-----------SATSAPQVTIPTT 2406
+S+RK K+AEE + DGP KRQRN L+ P T S T PQ+
Sbjct: 571 VSSRKQKSAEEPLLDGPVTKRQRNGLTSPATVRDAQTVVASGGWLEDSNTVIPQMMNRNQ 630
Query: 2407 TLSVSSPMTSPLTSKI-----------------EKLPEKKSNTTSSLHSLLRDIAVNPSI 2535
+ + L SK+ E LP ++TT+SL SLL+DIAVNP++
Sbjct: 631 LIENTGTDPKKLESKVTVTGIGCDKPYVTVNGNEHLPVVATSTTASLQSLLKDIAVNPAV 690
Query: 2536 WMNIL-KMEHVKSSDDIKSMTQMPNSYSLLGAVPSTIAVPPSSSMLGQMSAGIVQSPSQA 2712
WMNI K+E KS D K+ P S S+LG VP P S LGQ AG +Q P Q
Sbjct: 691 WMNIFNKVEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAGALQVP-QT 749
Query: 2713 VSTEEPGKVRMKPRDPRRILHNCAPQKGVTTASDQPKINASFSSAMMCSLSTARHEDQLE 2892
+E GKVRMKPRDPRRILH + Q+ ++ S+Q K NA + EDQ E
Sbjct: 750 GPMDESGKVRMKPRDPRRILHANSFQRSGSSGSEQFKTNAQ------------KQEDQTE 797
Query: 2893 XXXXXXXXXXPPDITMQFTSNLRNIADIMSVSQECMPSSVLPQIPSLQPVQVHQAGMETK 3072
PPDI+ QFT NL+NIAD+MS SQ + PQI S Q VQV+ M+ K
Sbjct: 798 TKSVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSVQVNTDRMDVK 857
Query: 3073 GVVADSGNPINGCDLTSEAAIAGPPRPLNANAWSDVEHLFEGFDDKQKAAIQRERARRLE 3252
V+DSG+ + E+A AGPP+ + N W DVEHLF+G+DD+QKAAIQRERARR+E
Sbjct: 858 ATVSDSGDQLTANGSKPESA-AGPPQ--SKNTWGDVEHLFDGYDDQQKAAIQRERARRIE 914
Query: 3253 EQKKMFAVRKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFPHMG 3432
EQKKMF+ RK NSAKFVEVDP+HDE+LRKKEEQDREK QRHLFRFPHMG
Sbjct: 915 EQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRHLFRFPHMG 974
Query: 3433 MWTKLRPGIWNFLEKASKLFELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEP 3612
MWTKLRPGIWNFLEKASKL+ELHLYTMGNK YATEMAK+LDPKG LF+GRVIS+GDDG+
Sbjct: 975 MWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISKGDDGDV 1034
Query: 3613 FDGDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPG 3792
DGD+RVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERY YFPCSRRQFGLPG
Sbjct: 1035 LDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPG 1094
Query: 3793 PSLLEIDHDERPEDGTLASSLAVIERIHQNFFAHQSLDEADVRNILASEQRKILAGCRIV 3972
PSLLEIDHDERPEDGTLASSLAVIERIHQ+FF++++LDE DVRNILASEQRKILAGCRIV
Sbjct: 1095 PSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRKILAGCRIV 1154
Query: 3973 FSRVFPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTHVVANSLGTDKVNWALSRGKFVV 4152
FSRVFPVGEA PH+HPLWQTAE FGAVC NQIDE VTHVVANSLGTDKVNWALS G+FVV
Sbjct: 1155 FSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVV 1214
Query: 4153 HPGWVEASALLYRRANELDFAIK 4221
HPGWVEASALLYRRANE DFAIK
Sbjct: 1215 HPGWVEASALLYRRANEQDFAIK 1237
>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
Length = 1184
Score = 1063 bits (2748), Expect = 0.0
Identities = 638/1243 (51%), Positives = 774/1243 (62%), Gaps = 24/1243 (1%)
Frame = +1
Query: 565 KVEVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXX 744
++ + DVEEGEISDSASVEEI+EE F+ ++ +
Sbjct: 49 RMGIEDVEEGEISDSASVEEISEEDFNKQEVRVLREAKPKADT----------------- 91
Query: 745 XXARVWTMRDL---YKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXX 915
RVWTMRDL YKY A LYNLAWAQAV NKPL D+FV++ DD+
Sbjct: 92 ---RVWTMRDLQDLYKYHQACSGYTPRLYNLAWAQAVQNKPLNDIFVII-DDSGDEMDVK 147
Query: 916 XXXXXXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGG- 1092
+ + DS +VK+E G
Sbjct: 148 MDDVSEKEEGELEEGEI----------------------------DLDSEPDVKDEGGVL 179
Query: 1093 DVNE----LDERERSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKM-----V 1245
DVNE L ERE +RV I+E+LES+ V +A+KS+ +CS L+ T SLQK+ V
Sbjct: 180 DVNEPEIDLKERELVERVKSIQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKVFGEKVV 239
Query: 1246 LEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQ 1425
E S KD L Q L+ AI+ L +F SM+ +E NK + RL++ V P+FS
Sbjct: 240 GESSVPTKDALAQQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFSIQH 299
Query: 1426 LEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTDLHVLLENTNNDSACLTKCGIESGSAGS 1605
++EVE + S L +PA S + S+ V TD
Sbjct: 300 IKEVEVMMSFLDTPAAQSSAEASDKVNDVQVTD--------------------------G 333
Query: 1606 LDQTQRNFSLQYSKSGLVNSKQ---KGVALPLLDLHKDHDADSLPSPTRDLSTPLPFEHG 1776
+++ + S++ S ++K+ + + PLLDLHKDHD DSLPSPT P
Sbjct: 334 MNRNILDSSVESSGRAFASAKKFRGRFIFGPLLDLHKDHDEDSLPSPTGKAPQCFPVN-- 391
Query: 1777 LLKPEWPIPRRTLDRENPVMHPYETDAVKAVSSYQQKFGRSSFFMSDNLPSPTPSEE-GD 1953
K E + + ++ +MHPYETDA+KAVS+YQQKFG +SF D LPSPTPSEE GD
Sbjct: 392 --KSELVTAKVAHETQDSIMHPYETDALKAVSTYQQKFGLTSFLPIDKLPSPTPSEESGD 449
Query: 1954 TTGDXXXXXXXXXXXXHT-GVNTLISGQPMVSSTSPMEALAGPEISDSRIAVPVSSFGNP 2130
T GD N G P+VSS M+ + G + + AV +S N
Sbjct: 450 TYGDISGEVSSSSTISAPITANAPALGHPIVSSAPQMDIVQGLVVPRNTGAV--NSRFNS 507
Query: 2131 VLKSSSAKSRDPRLRLANLDAGAR--SQSPSFVGSVESKLEYFG-MMSTRKPKTAEERVS 2301
+L++S AKSRDPRLRLA+ DAG+ ++ P S K++ G ++S+RK K+AEE +
Sbjct: 508 ILRAS-AKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLL 566
Query: 2302 DGPALKRQRNELSDPKTTMPIISATSAPQVTIPTTTLSVSSPMTSPLTSKIEKLPEKKSN 2481
DGP KRQRN L+ P T + + + T + P + + E LP ++
Sbjct: 567 DGPVTKRQRNGLTSPATKL---------ESKVTVTGIGCDKPYVT--VNGNEHLPVVATS 615
Query: 2482 TTSSLHSLLRDIAVNPSIWMNIL-KMEHVKSSDDIKSMTQMPNSYSLLGAVPSTIAVPPS 2658
TT+SL SLL+DIAVNP++WMNI K+E KS D K+ P S S+LG VP P
Sbjct: 616 TTASLQSLLKDIAVNPAVWMNIFNKVEQQKSGDPAKNTVLPPTSNSILGVVPPASVAPLK 675
Query: 2659 SSMLGQMSAGIVQSPSQAVST--EEPGKVRMKPRDPRRILHNCAPQKGVTTASDQPKINA 2832
S LGQ AG +Q P +E GKVRMKPRDPRRILH + Q+ ++ S+Q K NA
Sbjct: 676 PSALGQKPAGALQVPQTGPMNPQDESGKVRMKPRDPRRILHANSFQRSGSSGSEQFKTNA 735
Query: 2833 SFSSAMMCSLSTARHEDQLEXXXXXXXXXXPPDITMQFTSNLRNIADIMSVSQECMPSSV 3012
+ EDQ E PPDI+ QFT NL+NIAD+MS SQ +
Sbjct: 736 Q------------KQEDQTETKSVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMTPT 783
Query: 3013 LPQIPSLQPVQVHQAGMETKGVVADSGNPINGCDLTSEAAIAGPPRPLNANAWSDVEHLF 3192
PQI S Q VQV+ M+ K V+DSG+ + E+A AGPP+ + N W DVEHLF
Sbjct: 784 FPQILSSQSVQVNTDRMDVKATVSDSGDQLTANGSKPESA-AGPPQ--SKNTWGDVEHLF 840
Query: 3193 EGFDDKQKAAIQRERARRLEEQKKMFAVRKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRK 3372
+G+DD+QKAAIQRERARR+EEQKKMF+ RK NSAKFVEVDP+HDE+LRK
Sbjct: 841 DGYDDQQKAAIQRERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRK 900
Query: 3373 KEEQDREKPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLFELHLYTMGNKYYATEMAKLL 3552
KEEQDREK QRHLFRFPHMGMWTKLRPGIWNFLEKASKL+ELHLYTMGNK YATEMAK+L
Sbjct: 901 KEEQDREKSQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVL 960
Query: 3553 DPKGELFSGRVISRGDDGEPFDGDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNL 3732
DPKG LF+GRVIS+GDDG+ DGD+RVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNL
Sbjct: 961 DPKGVLFAGRVISKGDDGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNL 1020
Query: 3733 IVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFAHQSLDEA 3912
IVVERY YFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQ+FF++++LDE
Sbjct: 1021 IVVERYTYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEV 1080
Query: 3913 DVRNILASEQRKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTHVV 4092
DVRNILASEQRKILAGCRIVFSRVFPVGEA PH+HPLWQTAE FGAVC NQIDE VTHVV
Sbjct: 1081 DVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVV 1140
Query: 4093 ANSLGTDKVNWALSRGKFVVHPGWVEASALLYRRANELDFAIK 4221
ANSLGTDKVNWALS G+FVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1141 ANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAIK 1183
>gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
[Theobroma cacao]
Length = 1290
Score = 1018 bits (2631), Expect = 0.0
Identities = 639/1302 (49%), Positives = 783/1302 (60%), Gaps = 73/1302 (5%)
Frame = +1
Query: 535 EEDYKEQQLVKVEVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXX 714
EE E + +V DVEEGEISDSAS+EEI+EE F+ KQ K
Sbjct: 18 EETLGEMGKDETKVEDVEEGEISDSASIEEISEEDFN-KQDVKILKESKSSKGGEANSN- 75
Query: 715 XXXXXXXXXXXXARVWTMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDT 894
+RVWTM+DL KY + SGLYN AWAQAV NKPL ++FV +
Sbjct: 76 ------------SRVWTMQDLCKYPSVIRGYASGLYNFAWAQAVQNKPLNEIFVKDFEQP 123
Query: 895 XXXXXXXXXXXXXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEV 1074
V + E+K N++
Sbjct: 124 QQDENKNSKRSSPSSSVAS----VNSKEEKGSSGNLAVKVVIDDDSEDEMEEDKVVNLD- 178
Query: 1075 KNEVGGDVNELDERERSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKMVLEG 1254
K E + E+D K L E+ N + +K + + LE V + EG
Sbjct: 179 KEEGELEEGEIDLDSEPKEKVLSSEDGNVGNSDELEKRANLIRGVLEGVTVIEAEKSFEG 238
Query: 1255 SFSE----KDTLVQLLL--------TAIQTLYSMFSSMSLIL----QEQNKAILLRLVAR 1386
S ++L L+L IQ + +S + L +EQN AIL RL++
Sbjct: 239 VCSRLHNALESLRALILECSVPAKDALIQLAFGAINSAFVALNCNSKEQNVAILSRLLSI 298
Query: 1387 VTSLKPPLFSSLQLEEVEAIRSSLQSPADSLSND-NSNGRKQVGTTDLHVLLENTNNDSA 1563
V P LF +++E++ + SL SPA ++ + + V D L EN +D
Sbjct: 299 VKGHDPSLFPPDKMKEIDVMLISLNSPARAIDTEKDMKVVDGVNKKDPDALPENICHD-- 356
Query: 1564 CLTKCGIESGSAGSLDQTQRNFSLQYSKSGLVNSKQKGVALPLLDLHKDHDADSLPSPTR 1743
LT SA + + N + K G+ N + +G++LPLLDLHKDHDADSLPSPTR
Sbjct: 357 -LTVTNKLPSSAKFVINNKPNALTETLKPGVPNFRNRGISLPLLDLHKDHDADSLPSPTR 415
Query: 1744 DLSTPLPFEHGL------LKPEWPIPRRTLDRENPVMHPYETDAVKAVSSYQQKFGRSSF 1905
+ + LP L +K + + + D E +HPYETDA+KA S+YQQKFG+ SF
Sbjct: 416 ETTPCLPVNKPLTSGDVMVKSGFMTGKGSHDAEGDKLHPYETDALKAFSTYQQKFGQGSF 475
Query: 1906 FMSDNLPSPTPSEE-GDTTGDXXXXXXXXXXXXHTGVNTLISGQPMVSSTSPMEALAGPE 2082
F SD LPSPTPSEE GD GD + N I G P+VSS +P+ A
Sbjct: 476 FSSDRLPSPTPSEESGDEGGDNGGEVSSSSSIGNFKPNLPILGHPIVSS-APLVDSASSS 534
Query: 2083 IS---DSRIAVPVSSFGNPVLKSSSAKSRDPRLRLANLDAGARSQSPSFVGSVESKLEYF 2253
+ +R A P+SS N ++ S AKSRDPRL AN +A A + + +
Sbjct: 535 LQGQITTRNATPMSSVSN-IVSKSLAKSRDPRLWFANSNASALDLNERLLHNASKVAPVG 593
Query: 2254 GMMSTRKPKTAEERVSDGPALKRQRNELS------DPKTTMPI---ISATSA--PQVTIP 2400
G+M +RK K+ EE + D PALKRQRNEL D +T I + T A Q+T
Sbjct: 594 GIMDSRKKKSVEEPILDSPALKRQRNELENLGVARDVQTVSGIGGWLEDTDAIGSQITNR 653
Query: 2401 TTTL----SVSSPMTSPLTSKI-------------EKLPEKKSNTTSSLHSLLRDIAVNP 2529
T S S M + +TS E++P S +T SL +LL+DIAVNP
Sbjct: 654 NQTAENLESNSRKMDNGVTSSSTLSGKTNITVGTNEQVP-VTSTSTPSLPALLKDIAVNP 712
Query: 2530 SIWMNILKM---------EHVKSSDDIKSMTQMPNSYSLLGAVPSTIAVP-PSSSMLGQM 2679
++ +NILKM KS D +KS P+S SLLG V ST +P PS + + +
Sbjct: 713 TMLINILKMGQQQRLGAEAQQKSPDPVKSTFHQPSSNSLLGVVSSTNVIPSPSVNNVPSI 772
Query: 2680 SAGIVQSPS---QAVSTEEPGKVRMKPRDPRRILHNCAPQKGVTTASDQPKINASFSSAM 2850
S+GI P+ Q S +E GK+RMKPRDPRR+LH + Q+ + DQ K N + +S+
Sbjct: 773 SSGISSKPAGNLQVPSPDESGKIRMKPRDPRRVLHGNSLQRSGSMGLDQLKTNGALTSST 832
Query: 2851 MCS---LSTARHEDQLEXXXXXXXXXXPPDITMQFTSNLRNIADIMSVSQECMPSSVLPQ 3021
S L+ + + Q E PPDIT QFT+NL+NIADIMSVSQ +S+ P
Sbjct: 833 QGSKDNLNAQKLDSQTESKPMQSQLVPPPDITQQFTNNLKNIADIMSVSQAL--TSLPPV 890
Query: 3022 IPSL--QPVQVHQAGMETKGVVADSGNPINGCDLTSEAAIAGPPRPLNANAWSDVEHLFE 3195
+L QPV + M+ K +V++S + G L EA G P + NAW DVEHLFE
Sbjct: 891 SHNLVPQPVLIKSDSMDMKALVSNSEDQQTGAGLAPEAGATG---PRSQNAWGDVEHLFE 947
Query: 3196 GFDDKQKAAIQRERARRLEEQKKMFAVRKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKK 3375
+DD+QKAAIQRERARR+EEQKKMF+ RK NSAKF+EVDP+H+E+LRKK
Sbjct: 948 RYDDQQKAAIQRERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFIEVDPVHEEILRKK 1007
Query: 3376 EEQDREKPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLFELHLYTMGNKYYATEMAKLLD 3555
EEQDREKP+RHLFRF HMGMWTKLRPGIWNFLEKASKL+ELHLYTMGNK YATEMAK+LD
Sbjct: 1008 EEQDREKPERHLFRFHHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLD 1067
Query: 3556 PKGELFSGRVISRGDDGEPFDGDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLI 3735
PKG LF+GRVISRGDDG+PFDGD+RVP+SKDLEGVLGMESAVVIIDDSVRVWPHNKLNLI
Sbjct: 1068 PKGVLFAGRVISRGDDGDPFDGDERVPRSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLI 1127
Query: 3736 VVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFAHQSLDEAD 3915
VVERY YFPCSRRQFGL GPSLLEIDHDERPEDGTLASSLAVIERIHQ+FF+HQ+LD+ D
Sbjct: 1128 VVERYTYFPCSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIHQDFFSHQNLDDVD 1187
Query: 3916 VRNILASEQRKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTHVVA 4095
VRNILASEQRKILAGCRIVFSRVFPVGEA PH+HPLWQTAEQFGAVC NQIDEHVTHVVA
Sbjct: 1188 VRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEHVTHVVA 1247
Query: 4096 NSLGTDKVNWALSRGKFVVHPGWVEASALLYRRANELDFAIK 4221
NSLGTDKVNWALS GKFVVHPGWVEASALLYRRANE+DFAIK
Sbjct: 1248 NSLGTDKVNWALSTGKFVVHPGWVEASALLYRRANEVDFAIK 1289
>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
polymerase II C-terminal domain phosphatase-like 3-like
[Citrus sinensis] gi|557541056|gb|ESR52100.1|
hypothetical protein CICLE_v10030535mg [Citrus
clementina]
Length = 1234
Score = 1005 bits (2599), Expect = 0.0
Identities = 619/1284 (48%), Positives = 770/1284 (59%), Gaps = 70/1284 (5%)
Frame = +1
Query: 580 DVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXXARV 759
DVEEGEISD+ASVEEI+EE F KQ + ARV
Sbjct: 4 DVEEGEISDTASVEEISEEDFKIKQ-----------EEVVKVVKETKPIKVGGGEAAARV 52
Query: 760 WTMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXX 936
WTMRDLY KY + GL+NLAWAQAV NKPL ++FVM +
Sbjct: 53 WTMRDLYNKYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDD------------- 99
Query: 937 XXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVEN---KDSNVEVKNEVG----GD 1095
V VVE DS E++ E G G+
Sbjct: 100 ---------VSKRSSPASSVASVNSGAAAGKDDKKVVEKVVIDDSGDEIEKEEGELEEGE 150
Query: 1096 VN-ELDERERSKRVNLIKEELESLNVADAKK----------SYDRLCSSLETTAVSLQKM 1242
+ +L+ K +KEE++ +NV ++ S++ +CS LE T SL+++
Sbjct: 151 IELDLESESNEKVSEQVKEEMKLINVESIREALESVLRGDISFEGVCSKLEFTLESLREL 210
Query: 1243 VLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSL 1422
V E + KD L+QL +A+Q+++S+F SM+ +L+EQNK IL RL++ + S +PPLFSS
Sbjct: 211 VNENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSVIKSHEPPLFSSN 270
Query: 1423 QLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTDLHVLLENTNNDSACLTKCGIESGSAG 1602
Q++E+EA+ SSL + A+ D V D +++ EN ND K +
Sbjct: 271 QIKEMEAMLSSLVTRANDKEKDML-AMHGVNGKDSNIVTENAVNDLNFKEKVPLP----- 324
Query: 1603 SLDQTQRNFSLQYSKSGLVNSKQKGVALPLLDLHKDHDADSLPSPTRDLSTPLPFEHGLL 1782
+D +N L+ SK G + +GV LPLLD HK HD DSLPSPTR+ + +P + L+
Sbjct: 325 -VDSLMQNKPLEASKPGPPGYRSRGVLLPLLDPHKVHDVDSLPSPTRETTPSVPVQRALV 383
Query: 1783 KPE-----WPIPRRTLDRENPVMHP-YETDAVKAVSSYQQKFGRSSFFMSDNLPSPTPSE 1944
+ W + P YETDA++A SSYQQKFGR+SFFM+ LPSPTPSE
Sbjct: 384 VGDGVVKSWAAAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSFFMNSELPSPTPSE 443
Query: 1945 E-GDTTGDXXXXXXXXXXXXHTG-VNTLISGQPMVSS-----TSPMEALAGPEISDSRIA 2103
E GD GD VN GQ VSS + PM+ + ++ + +
Sbjct: 444 ESGDGDGDTGGEISSATAVDQPKPVNMPTLGQQPVSSQPMDISQPMDISSVQALTTANNS 503
Query: 2104 VPVSSFGNPVLKSSSA-----KSRDPRLRLANLDAGARSQSPSFVGSVESKLEYFG-MMS 2265
P SS NPV+K + KSRDPRLR A+ +A + P+ + K+E G +MS
Sbjct: 504 APASSGYNPVVKPNPVVKAPIKSRDPRLRFASSNALNLNHQPAPILHNAPKVEPVGRVMS 563
Query: 2266 TRKPKTAEERVSDGPALKRQRNE-------------------LSDPKTTMPIISATSAPQ 2388
+RK KT EE V DGPALKRQRN L D P I +
Sbjct: 564 SRKQKTVEEPVLDGPALKRQRNGFENSGVVRDEKNIYGSGGWLEDTDMFEPQIMNRNLLV 623
Query: 2389 VTIPTTTLSVSSPMTSPLTSKI--------EKLPEKKSNTTSSLHSLLRDIAVNPSIWMN 2544
+ + + + + TSP+TS E P +TT SL +LL+DIAVNP++ +N
Sbjct: 624 DSAESNSRKLDNGATSPITSGTPNVVVSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLN 683
Query: 2545 ILKM-EHVKSSDDIKSMTQMPNSYSLLGAVPSTIAVPPSSSMLGQMSAGIVQSPSQAVST 2721
ILKM + K + D + + + ++ +PS+I P S+ + +GI+ P
Sbjct: 684 ILKMGQQQKLAADAQQKSNDSSMNTMHPPIPSSI---PPVSVTCSIPSGILSKPM----- 735
Query: 2722 EEPGKVRMKPRDPRRILHNCAPQK----GVTTASDQPKINASFSSAMMCSLSTARHEDQL 2889
+E GKVRMKPRDPRR+LH A Q+ G +D P +A + +L+ +
Sbjct: 736 DELGKVRMKPRDPRRVLHGNALQRSGSLGPEFKTDGP--SAPCTQGSKENLNFQKQLGAP 793
Query: 2890 EXXXXXXXXXXPPDITMQFTSNLRNIADIMSVSQECMPSSVLPQIPSLQPVQVHQAGMET 3069
E PDIT QFT NL++IAD MSVSQ ++ Q +QP Q+ ++G +
Sbjct: 794 EAKPVLSQSVLQPDITQQFTKNLKHIADFMSVSQPLTSEPMVSQNSPIQPGQI-KSGADM 852
Query: 3070 KGVVADSGNPINGCDLTSEAAIAGPPRPLNANAWSDVEHLFEGFDDKQKAAIQRERARRL 3249
K VV + + G T AGP +AW DVEHLFEG+DD+QKAAIQ+ER RRL
Sbjct: 853 KAVVTNHDDKQTG---TGSGPEAGPVGAHPQSAWGDVEHLFEGYDDQQKAAIQKERTRRL 909
Query: 3250 EEQKKMFAVRKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFPHM 3429
EEQKKMF+ RK NSAKF EVDP+HDE+LRKKEEQDREKP RHLFRFPHM
Sbjct: 910 EEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHM 969
Query: 3430 GMWTKLRPGIWNFLEKASKLFELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGE 3609
GMWTKLRPGIW FLE+ASKLFE+HLYTMGNK YATEMAK+LDPKG LF+GRVISRGDDG+
Sbjct: 970 GMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGD 1029
Query: 3610 PFDGDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLP 3789
PFDGD+RVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERY YFPCSRRQFGL
Sbjct: 1030 PFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLL 1089
Query: 3790 GPSLLEIDHDERPEDGTLASSLAVIERIHQNFFAHQSLDEADVRNILASEQRKILAGCRI 3969
GPSLLEIDHDER EDGTLASSL VIER+H+ FF+HQSLD+ DVRNILA+EQRKILAGCRI
Sbjct: 1090 GPSLLEIDHDERSEDGTLASSLGVIERLHKIFFSHQSLDDVDVRNILAAEQRKILAGCRI 1149
Query: 3970 VFSRVFPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTHVVANSLGTDKVNWALSRGKFV 4149
VFSRVFPVGEA PH+HPLWQTAEQFGAVC ID+ VTHVVANSLGTDKVNWALS G+FV
Sbjct: 1150 VFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFV 1209
Query: 4150 VHPGWVEASALLYRRANELDFAIK 4221
VHPGWVEASALLYRRANE DFAIK
Sbjct: 1210 VHPGWVEASALLYRRANEQDFAIK 1233
>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
gi|550343308|gb|EEE79627.2| hypothetical protein
POPTR_0003s16280g [Populus trichocarpa]
Length = 1247
Score = 1001 bits (2588), Expect = 0.0
Identities = 617/1295 (47%), Positives = 761/1295 (58%), Gaps = 78/1295 (6%)
Frame = +1
Query: 571 EVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXX 750
++ DVEEGEISD+ASVEEI+E+ F+ ++ +
Sbjct: 16 KMEDVEEGEISDTASVEEISEDDFNKQEVVVVKETPSSTTNNNSSSKQ------------ 63
Query: 751 ARVWTMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMME-DDTXXXXXXXXXXX 927
+VWT+RDLYKYQ+ SGLYNLAWAQAV NKPL ++FV +E DD+
Sbjct: 64 -KVWTVRDLYKYQVGGGYM-SGLYNLAWAQAVQNKPLNELFVEVEVDDSSQKSSVSSVNS 121
Query: 928 XXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGGDVNEL 1107
VI E ++ +++ +E G +
Sbjct: 122 SKEDKRTV----VIDDSGDEMDVVKVIDIEKEEG------ELEEGEIDLDSE-GKSEGGM 170
Query: 1108 DERERSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKMVL--EGSFSEKDTLV 1281
+ KRV I+E+LES++V KS++ +C L SL+++V E F KD+LV
Sbjct: 171 VSVDTEKRVKSIREDLESVSVIKDDKSFEAVCLKLHNALESLKELVRVNENGFPSKDSLV 230
Query: 1282 QLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEVEAIRSSLQ 1461
+LL TAI + S FSSM+ L+EQNK + +R ++ V S P FS +EV
Sbjct: 231 RLLFTAIGAVNSFFSSMNQKLKEQNKGVFMRFLSLVNSHDPSFFSPEHTKEV-------- 282
Query: 1462 SPADSLSNDNSNGRKQVGTTDLHVLLENTNNDSAC--LTKCGIESGSAGSLDQTQRNFSL 1635
D N D ++ S C LT +A S + NFS+
Sbjct: 283 -------CDFCN-------FDFRIV-------SLCYDLTTMNRLPSAAESFVHNKPNFSI 321
Query: 1636 QYSKSGLVNSKQKGVALPLLDLHKDHDADSLPSPTRDLSTPLPFEH------GLLKPEWP 1797
+ K G+ + K +GV LPLLDL K HD DSLPSPTR+ + P + G++ P
Sbjct: 322 EPPKPGVPSFKSRGVLLPLLDLKKFHDEDSLPSPTRETAPSFPVQRLLPIGDGMISSGLP 381
Query: 1798 IPRRTLDRENPVMHPYETDAVKAVSSYQQKFGRSSFFMSDNLPSPTPSEE-----GDTTG 1962
+P+ E P +HPYETDA+KAVSSYQ+KF +SFF ++ LPSPTPSEE GDT G
Sbjct: 382 VPKVASITEEPRVHPYETDALKAVSSYQKKFNLNSFFTNE-LPSPTPSEESGNGDGDTAG 440
Query: 1963 DXXXXXXXXXXXXHTGVNTLISGQPMVSSTSPMEALAGPE----------ISDSRIAVPV 2112
+ + V+ S P S P P + +R + PV
Sbjct: 441 EVSSSSTVNYRTVNPPVSDRKSASPSPSPPPPPPPPPPPPPHLNNSSIRVVIPTRNSAPV 500
Query: 2113 SSFGNPVLKSSSAKSRDPRLRLANLDAGARSQSPSFVGSVES--KLEYFGMMSTRKPKTA 2286
SS + +K+S AKSRDPRLR N DA A Q+ + V + + E G ++ + +
Sbjct: 501 SSGTSSTVKAS-AKSRDPRLRYVNTDASALDQNQRTLLMVNNPPRAEPSGAIAGSRKQKI 559
Query: 2287 EERVSDGPALKRQRNELSDPKTTMPIISATSA-----------PQ--------------- 2388
EE V DG +LKRQRN + I S T PQ
Sbjct: 560 EEDVLDGTSLKRQRNSFDNFGVVRDIRSMTGTGGWLEDTDMAEPQTVNKNQWAENAEPGQ 619
Query: 2389 -----VTIPTTTLSVSS---------PMTSPLTSKIEKLPEKKSNTTSSLHSLLRDIAVN 2526
V P+T +SS P+ T + S TT+SL LL+DI VN
Sbjct: 620 RINNGVVCPSTGSVMSSVSCSGNVQVPVMGINTIAGSEQAPVTSTTTASLPDLLKDITVN 679
Query: 2527 PSIWMNILKMEHV---------KSSDDIKSMTQMPNSYSLLGAVPSTIAVPPSSSMLGQM 2679
P++ +NILKM K +D KS + P+S ++LGA+P AV S +
Sbjct: 680 PTMLINILKMGQQQRLALDGQQKLADPAKSTSHPPSSNTVLGAIPEVNAVSSLPSGILPR 739
Query: 2680 SAGIVQSPSQAVSTEEPGKVRMKPRDPRRILHNCAPQKGVTTASDQPKINASFSSAMMCS 2859
SAG Q PSQ +T+E GK+RMKPRDPRR+LHN A Q+ + S+Q K S+
Sbjct: 740 SAGKAQGPSQIATTDESGKIRMKPRDPRRVLHNNALQRAGSLGSEQFKTTTLTSTTQ--- 796
Query: 2860 LSTARHED-QLEXXXXXXXXXXPPDITMQFTSNLRNIADIMSVSQECMPSSVLPQIPSLQ 3036
T +++ Q + PPDI+ FT +L+NIADI+SVSQ C + Q + Q
Sbjct: 797 -GTKDNQNLQKQEGLAELKPVVPPDISSPFTKSLKNIADIVSVSQTCTTPPFVSQNVASQ 855
Query: 3037 PVQVHQAGMETKGVVADSGNPINGCDLTSEAAIAGPPRPLNANAWSDVEHLFEGFDDKQK 3216
PVQ+ ++ K +++S + A + L+ N W DVEHLFEG+DD+QK
Sbjct: 856 PVQIKSDRVDGKTGISNSDQKMGPASSPEVVAASS----LSQNTWEDVEHLFEGYDDQQK 911
Query: 3217 AAIQRERARRLEEQKKMFAVRKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREK 3396
AAIQRERARR+EEQKK+FA RK NSAKFVEVDP+HDE+LRKKEEQDREK
Sbjct: 912 AAIQRERARRIEEQKKLFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREK 971
Query: 3397 PQRHLFRFPHMGMWTKLRPGIWNFLEKASKLFELHLYTMGNKYYATEMAKLLDPKGELFS 3576
P RHLFRFPHMGMWTKLRPGIWNFLEKASKL+ELHLYTMGNK YATEMAK+LDPKG LF+
Sbjct: 972 PYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFA 1031
Query: 3577 GRVISRGDDGEPFDGDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIY 3756
GRV+SRGDDG+ DGD+RVPKSKDLEGVLGMES VVIIDDS+RVWPHNKLNLIVVERYIY
Sbjct: 1032 GRVVSRGDDGDLLDGDERVPKSKDLEGVLGMESGVVIIDDSLRVWPHNKLNLIVVERYIY 1091
Query: 3757 FPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFAHQSLDEADVRNILAS 3936
FPCSRRQFGLPGPSLLEIDHDERPEDGTLA SLAVIERIHQNFF H SLDEADVRNILAS
Sbjct: 1092 FPCSRRQFGLPGPSLLEIDHDERPEDGTLACSLAVIERIHQNFFTHHSLDEADVRNILAS 1151
Query: 3937 EQRKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTHVVANSLGTDK 4116
EQRKILAGCRIVFSRVFPVGE PH+HPLWQ+AEQFGAVC NQIDE VTHVVANSLGTDK
Sbjct: 1152 EQRKILAGCRIVFSRVFPVGEVNPHLHPLWQSAEQFGAVCTNQIDEQVTHVVANSLGTDK 1211
Query: 4117 VNWALSRGKFVVHPGWVEASALLYRRANELDFAIK 4221
VNWALS G+FVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1212 VNWALSTGRFVVHPGWVEASALLYRRANEQDFAIK 1246
>ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus trichocarpa]
gi|550347145|gb|EEE82674.2| CTD phosphatase-like protein
3 [Populus trichocarpa]
Length = 1190
Score = 964 bits (2493), Expect = 0.0
Identities = 601/1273 (47%), Positives = 744/1273 (58%), Gaps = 57/1273 (4%)
Frame = +1
Query: 574 VHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXXA 753
+ DVEEGEISD+ASVEEI+EE F+ ++ S
Sbjct: 15 IEDVEEGEISDTASVEEISEEDFNKQEVVIVKETPSSNNSSQ------------------ 56
Query: 754 RVWTMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXX 933
+VWT+RDLYKYQ+ SGLYNLAWA+AV NKPL ++ V+++D
Sbjct: 57 KVWTVRDLYKYQVGGGYM-SGLYNLAWARAVQNKPLNELTVVIDDSGDEMD--------- 106
Query: 934 XXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDS-NVEVKNEVGGDVNELD 1110
V+ VV+++ +V+V+N
Sbjct: 107 ----------VVKVIDIEKEEGELEEGEIDLDSEPVVVQSEGMVSVDVEN---------- 146
Query: 1111 ERERSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKMV--LEGSFSEKDTLVQ 1284
RV I+++LES++V + +KS++ +C L SL+++V + SF KD LVQ
Sbjct: 147 ------RVKSIRKDLESVSVIETEKSFEAVCLKLHKVLESLKELVGGNDNSFPSKDGLVQ 200
Query: 1285 LLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEVEAIRSSLQS 1464
LL AI+ + S+F SM+ L+EQNK + R + + S PP FS Q +EV
Sbjct: 201 LLFMAIRVVNSVFCSMNKKLKEQNKGVFSRFFSLLNSHYPPFFSPGQNKEV--------- 251
Query: 1465 PADSLSNDNSNGRKQVGTTDLHVLLENTNNDSACLTKCGIESGSAGSLDQTQRNFSLQYS 1644
N+N N L + D LT + +A + Q + N S++
Sbjct: 252 -----LNENHNDS----------LAKTAGYD---LTTMSEKLPAAETFVQNKPNKSIEAP 293
Query: 1645 K-SGLVNSKQKGVALPLLDLHKDHDADSLPSPTRDLSTPLPFEH------GLLKPEWPIP 1803
K G+ + K +GV LPLLDL K HD DSLPSPT++ +TP P + G++ P+P
Sbjct: 294 KPPGVPSFKSRGVLLPLLDLKKYHDEDSLPSPTQE-TTPFPVQRLLAIGDGMVSSGLPVP 352
Query: 1804 RRTLDRENPVMHPYETDAVKAVSSYQQKFGRSSFFMSDNLPSPTPSEE-----GDTTGDX 1968
+ T E P MHPYETDA+KAVSSYQQKF R+SFF ++ LPSPTPSEE GDT G+
Sbjct: 353 KVTPVAEEPRMHPYETDALKAVSSYQQKFNRNSFF-TNELPSPTPSEESGNGDGDTAGE- 410
Query: 1969 XXXXXXXXXXXHTGVNTLISGQPMVSSTSPMEALAGPEISDSRI--------AVPVSSFG 2124
+ VN +S Q + P P S I + PVSS
Sbjct: 411 --VSSSSTVVNYRTVNPPVSDQKNAPPSPPPLPPPPPHPDSSNIRGVVPTRNSAPVSSGP 468
Query: 2125 NPVLKSSSAKSRDPRLRLANLDAGARSQSPSFVGSVES--KLEYFGMMSTRKPKTAEERV 2298
+ +K +SAKSRDPRLR N+DA A + + V + ++E G + K EE V
Sbjct: 469 SSTIK-ASAKSRDPRLRYVNIDACALDHNQRALPMVNNLPRVEPAGAIVGSKKHKIEEDV 527
Query: 2299 SDGPALKRQRNELSDPKTTMPIISAT-----------SAPQVT-----IPTTTLSVSSPM 2430
D P+LKRQRN + I S T + PQ + ++ S
Sbjct: 528 LDDPSLKRQRNSFDNYGAVRDIESMTGTGGWLEDTDMAEPQTVNKNQWAENSNVNGSGNA 587
Query: 2431 TSPL--TSKI--EKLPEKKSNTTSSLHSLLRDIAVNPSIWMNILKMEHVKS--------- 2571
SP S I + + S T+SL LL+DIAVNP++ +NILKM +
Sbjct: 588 QSPFMGISNITGSEQAQVTSTATTSLPDLLKDIAVNPTMLINILKMGQQQRLALDGQQTL 647
Query: 2572 SDDIKSMTQMPNSYSLLGAVPSTIAVPPSSSMLGQMSAGIVQSPSQAVSTEEPGKVRMKP 2751
SD KS + P S ++LGA+P+ S + AG PSQ +++E GK+RMKP
Sbjct: 648 SDPAKSTSHPPISNTVLGAIPTVNVASSQPSGIFPRPAG-TPVPSQIATSDESGKIRMKP 706
Query: 2752 RDPRRILHNCAPQKGVTTASDQPKINASFSSAMMCSLSTARHED---QLEXXXXXXXXXX 2922
RDPRR LHN + Q+ + S+Q F + + + +D Q +
Sbjct: 707 RDPRRFLHNNSLQRAGSMGSEQ------FKTTTLTPTTQGTKDDQNVQKQEGLAELKPTV 760
Query: 2923 PPDITMQFTSNLRNIADIMSVSQECMPSSVLPQIPSLQPVQVHQAGMETKGVVADSGNPI 3102
PPDI+ FT +L NIADI+SVSQ + Q + QP+Q ++ K ++ S
Sbjct: 761 PPDISFPFTKSLENIADILSVSQASTTPPFISQNVASQPMQTKSERVDGKTGISISDQKT 820
Query: 3103 NGCDLTSEAAIAGPPRPLNANAWSDVEHLFEGFDDKQKAAIQRERARRLEEQKKMFAVRK 3282
A + + N W DVEHLFEG+DD+QKAAIQRERARRLEEQKKMFA RK
Sbjct: 821 GPASSPEVVAASSH----SQNTWKDVEHLFEGYDDQQKAAIQRERARRLEEQKKMFAARK 876
Query: 3283 XXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFPHMGMWTKLRPGIW 3462
NSAK + LHDE+LRKKEEQDREKP RH+FR PHMGMWTKLRPGIW
Sbjct: 877 LCLVLDLDHTLLNSAKAILSSSLHDEILRKKEEQDREKPYRHIFRIPHMGMWTKLRPGIW 936
Query: 3463 NFLEKASKLFELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDGDDRVPKS 3642
NFLEKASKLFELHLYTMGNK YATEMAK+LDPKG LF+GRVISRGDDG+PFDGD+RVPKS
Sbjct: 937 NFLEKASKLFELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKS 996
Query: 3643 KDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDE 3822
KDLEGVLGMES VVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDE
Sbjct: 997 KDLEGVLGMESGVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDE 1056
Query: 3823 RPEDGTLASSLAVIERIHQNFFAHQSLDEADVRNILASEQRKILAGCRIVFSRVFPVGEA 4002
RPEDGTLA S AVIE+IHQNFF H+SLDEADVRNILASEQRKIL GCRI+FSRVFPVGE
Sbjct: 1057 RPEDGTLACSFAVIEKIHQNFFTHRSLDEADVRNILASEQRKILGGCRILFSRVFPVGEV 1116
Query: 4003 KPHMHPLWQTAEQFGAVCINQIDEHVTHVVANSLGTDKVNWALSRGKFVVHPGWVEASAL 4182
PH+HPLWQ AEQFGAVC NQIDE VTHVVANSLGTDKVNWALS G+ VVHPGWVEASAL
Sbjct: 1117 NPHLHPLWQMAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRIVVHPGWVEASAL 1176
Query: 4183 LYRRANELDFAIK 4221
LYRRANE DF+IK
Sbjct: 1177 LYRRANEQDFSIK 1189
>ref|XP_004492028.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like isoform X1 [Cicer arietinum]
Length = 1247
Score = 944 bits (2441), Expect = 0.0
Identities = 611/1303 (46%), Positives = 763/1303 (58%), Gaps = 67/1303 (5%)
Frame = +1
Query: 520 AFLNMEEDYKEQQLVKVEVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXX 699
+FL+ E + + K EV DVEEGEISD+ASV EI+EE F+ + K+
Sbjct: 5 SFLDCENSKNFEGMGK-EVEDVEEGEISDTASVVEISEEDFNKQDVVKVNNNSDSDKAKT 63
Query: 700 XXXXXXXXXXXXXXXXXARVWTMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFV 876
ARVW + DLY KY + SGLYNLAWAQAV NKPL D+FV
Sbjct: 64 GGD--------------ARVWAVHDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFV 109
Query: 877 M-MEDDTXXXXXXXXXXXXXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVEN 1053
M ++ D+ V+ E
Sbjct: 110 MELDSDSNANANSNNDSNNGNGDLNMPLKEVVMVDDDEREEG----------------EL 153
Query: 1054 KDSNVEVKNEVGGDVNELDERERSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSL 1233
++ ++ ++ GG + D E + I++ LE + VA+ +S+ S L L
Sbjct: 154 EEGEIDGDDDTGGVMVGGDGSETVSESD-IRDFLEGVTVANVAESFAETISRLLRV---L 209
Query: 1234 QKMVLEG-SFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPL 1410
Q +L G + SEKD +++LL AI+ ++S+F SM + +E NK ++RL+ + + L
Sbjct: 210 QSKLLSGPAVSEKDYVIRLLYNAIEIVHSVFCSMDNLQKEDNKDNIIRLLYFLKNEHTQL 269
Query: 1411 FSSLQLEEVEAIRSSLQSPADSLSNDN--SNGRK----QVGTTDLHVLLENTNNDSACLT 1572
FS ++E++ + +++ + D+L N NG K + T + L + S+ L
Sbjct: 270 FSPEHMKEIQVMITAIDT-VDALGNSVVVGNGEKLDTLDIKTRQIQGLKASELISSSKLV 328
Query: 1573 KCGIESGSAGSLDQTQRNFSLQYSKSGLVNSKQKGVALPLLDLHKDHDADSLPSPTRDLS 1752
+ S L SG N K +GV LPL DLHK HD DSLPSPTR+
Sbjct: 329 HSNLTEASEALL-------------SGQSNIKGRGVMLPLFDLHKVHDLDSLPSPTREAP 375
Query: 1753 TPLPFEH------GLLKPEWPIPRRT------LDRENPVMHPYETDAVKAVSSYQQKFGR 1896
+ P G+ +P P +T LD EN H YETDA+KAVS+YQQKFGR
Sbjct: 376 SFFPVNKLFSVGDGMDRPGLPSAGKTEAVKMELDTENSKNHLYETDALKAVSTYQQKFGR 435
Query: 1897 SSFFMSDNLPSPTPS---EEGDTTGDXXXXXXXXXXXXHTGVNTLISGQPMVSSTSPMEA 2067
SS+F D PSPTPS EEG + T L+ P+ S++ +
Sbjct: 436 SSYFTDDKFPSPTPSGDCEEGVADANEEVSSASIAVSL-TSSKPLLDQMPVSSTSVDRSS 494
Query: 2068 LAGPEISDSRIAVPVSSFGNPVLKSSSAKSRDPRLRLANLDAGARSQSPSFVGSVESKLE 2247
+ G + +SRI SS PV +SA+SRDPRLR N DA A + S + K+E
Sbjct: 495 MHG--LINSRIEA-ASSVTYPV--KTSARSRDPRLRFINSDASALDLNQSLGTNNMPKVE 549
Query: 2248 YFGMMSTRKPKTAEERVSDGPALKRQRNELSDPK------TTMP---------------I 2364
G + +RK KT EE D A KR R+ L + + TM +
Sbjct: 550 NAGRVISRKQKTTEELSLDATAPKRLRSSLENSRHNTREERTMAGNGGWLEENRVAGSHL 609
Query: 2365 ISATSAPQV--TIPTTTLSVSSPMTSPLTSKIEKLPEKKSNTTSSLHSLLRDIAVNPSIW 2538
I Q T T+S SS ++ ++ E+ P SNT ++L LL++IAVNP++
Sbjct: 610 IERNHLMQKGETELKKTMSTSSGYSTVTSNGNEQAPVTVSNTAAALPGLLKNIAVNPTML 669
Query: 2539 MNILKME--------HVKSSDDIKSMTQMPNSYSLLGAVPSTIAVPPSSSMLGQMSAGIV 2694
+NIL + + K D S + NS A +T P ++ L Q S G++
Sbjct: 670 LNILLEQQQRLAAEANKKPVDSATSTMHLTNSARGPDATVNT--GPAMTAGLPQSSVGML 727
Query: 2695 QSPSQAVST-----EEPGKVRMKPRDPRRILHNCAP-QKGVTTASDQPKINASFSSAMMC 2856
+ +QA S E+ GK+RMKPRDPRRILH + QK +T S+Q K S +S
Sbjct: 728 PASTQAASMAHTLLEDSGKIRMKPRDPRRILHGSSSLQKSGSTGSEQSKSVVSPTSNNQG 787
Query: 2857 S---LSTARHEDQLEXXXXXXXXXXPPDITMQFTSNLRNIADIMSVSQECMPSSVLP--- 3018
+ ++ + + ++E PDIT QFT NL+NIADIMSVSQE PS+ LP
Sbjct: 788 NGGNVNAQKLDVRVETKLAPTQSSAQPDITRQFTKNLKNIADIMSVSQE--PSTQLPATT 845
Query: 3019 QIPSLQPVQVHQAGMETKGVVADSGNPINGCDLTSEAAIAGPPRPLNANAWSDVEHLFEG 3198
Q S V E K V +S N +G E G R + + W+DVEHLFEG
Sbjct: 846 QNVSSASVPFTLDKAELKSGVPNSQNLQDGVGSAPETCAPGSSR--SQSTWADVEHLFEG 903
Query: 3199 FDDKQKAAIQRERARRLEEQKKMFAVRKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKE 3378
+D+KQKAAIQRERARRLEEQ KMFA +K NSAKFVEVDP+HDE+LRKKE
Sbjct: 904 YDEKQKAAIQRERARRLEEQNKMFASKKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKE 963
Query: 3379 EQDREKPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLFELHLYTMGNKYYATEMAKLLDP 3558
EQDREKP RHLFRFPHMGMWTKLRPG+WNFLEKASKL+ELHLYTMGNK YATEMAK+LDP
Sbjct: 964 EQDREKPHRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKLYATEMAKVLDP 1023
Query: 3559 KGELFSGRVISRGDDGEPFDGDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIV 3738
KG LF+GRVISRGDD E DGD+R PKSKDLEGV+GMES+VVI+DDSVRVWPHNKLNLIV
Sbjct: 1024 KGVLFAGRVISRGDDTESVDGDERAPKSKDLEGVMGMESSVVIVDDSVRVWPHNKLNLIV 1083
Query: 3739 VERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFAHQSLDEADV 3918
VERY YFPCSRRQFGLPGPSLLEIDHDERPE GTLASSLAVIERIHQNFFA QSL+E DV
Sbjct: 1084 VERYTYFPCSRRQFGLPGPSLLEIDHDERPEAGTLASSLAVIERIHQNFFASQSLEEVDV 1143
Query: 3919 RNILASEQRKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTHVVAN 4098
RNILASEQRKILAGCRIVFSRVFPVGEA PH+HPLWQTAEQFGAVCINQID+ VTHVVAN
Sbjct: 1144 RNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCINQIDDQVTHVVAN 1203
Query: 4099 SLGTDKVNWALSRGKFVVHPGWVEASALLYRRANELDFAIKQQ 4227
SLGTDKVNWA+S G+FVVHPGWVEASALLYRRANE DFAIK +
Sbjct: 1204 SLGTDKVNWAISTGRFVVHPGWVEASALLYRRANEQDFAIKPE 1246
>ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
gi|223548611|gb|EEF50102.1| RNA polymerase II ctd
phosphatase, putative [Ricinus communis]
Length = 1195
Score = 944 bits (2440), Expect = 0.0
Identities = 592/1297 (45%), Positives = 743/1297 (57%), Gaps = 72/1297 (5%)
Frame = +1
Query: 547 KEQQLVKVEVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXX 726
KE + + ++V DVEEGEISD+AS+EEI+EE F+ + ++
Sbjct: 3 KEDENIIMKVGDVEEGEISDTASIEEISEEDFNKQDVVVVKPPSSNNETTKQKEQGNGN- 61
Query: 727 XXXXXXXXARVWTMRDLYKYQIASKTSYSGLYNLAWAQAV------NNKPLGDVFVMMED 888
RVWT+ DLY+YQ+ SGLYNLAWAQAV +NKPL ++F + +
Sbjct: 62 --------GRVWTISDLYRYQMVGG-HVSGLYNLAWAQAVQSKPGKSNKPLNELFADVVE 112
Query: 889 DTXXXXXXXXXXXXXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNV 1068
+ NKD +
Sbjct: 113 ELDESSKRSSPSSSAASVNS---------------------------------NNKDGDE 139
Query: 1069 EVKNEV-------GGDVNELDERERSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAV 1227
E K V GD +D+ R+K V+++++E L + + + +
Sbjct: 140 EKKKVVEKVVIDDNGD-EMMDDNNRNKIVDVVEKEEGELEEGEIDLDMEPGEKANNGDVL 198
Query: 1228 SLQKMVLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPP 1407
++ LE EK F +++ +++ + V T
Sbjct: 199 NMNIDGLEVESGEKG----------------FEKKMNSIRDALESVTIEFVLACTDSSGV 242
Query: 1408 LFSSLQLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTDLHVLLENTNNDSACLTKCGIE 1587
FSS +E E + S++ + D+ N S+G +D + + K +
Sbjct: 243 SFSSFSEKEKEPLISTVVNKKDNDVNGKSSG-----------------HDMSAVNKLPTD 285
Query: 1588 SGSAGSLDQTQRNFSLQYSKSGLVNSKQKGVALPLLDLHKDHDADSLPSPTRDLSTPLPF 1767
S + N S++ K+G+ + K + LPLLDLHKDHDADSLPSPTR+ + PLP
Sbjct: 286 S-----FVNNKANLSIEGPKTGVSSFKSRAALLPLLDLHKDHDADSLPSPTRESALPLPA 340
Query: 1768 EHGLLKPEWPIPRRTLDRENPVMHPYETDAVKAVSSYQQKFGRSSFFMSDNLPSPTPSEE 1947
L P+ LD N MHPYETDA+KAVSSYQQKF +SSF ++D LPSPTPSEE
Sbjct: 341 YRVLT------PKMVLDTGNSRMHPYETDALKAVSSYQQKFSKSSFALTDRLPSPTPSEE 394
Query: 1948 -----GDTTGDXXXXXXXXXXXXHTGVNTLISGQPMVSSTSP-MEALAGPEISDSRIAVP 2109
GDT G+ N L SGQ S + P M+ + P + + AV
Sbjct: 395 SGNGDGDTGGEVSSSLSVSSFRP---ANPLTSGQSNASISLPRMDGSSLPGVISIKSAVR 451
Query: 2110 VSSFGNPVLKSSSAKSRDPRLRLANLDAGARSQSPSFVGSVES-KLEYFG-MMSTRKPKT 2283
SS + +K+S AKSRDPRLR N D+ A Q+ V V + K+E G M+ ++ K
Sbjct: 452 ASSAPSLTVKAS-AKSRDPRLRFVNSDSNALDQNHRAVPVVNTLKVEPIGGTMNKKRQKI 510
Query: 2284 AEERVSDGPALKRQRNELS------DPKTTMP---------------------IISATSA 2382
++ + DG +LKRQ+N L D KT + + +A S
Sbjct: 511 VDDPIPDGHSLKRQKNALENSGVVRDVKTMVGSGGWLEDTDMVGPQTMNKNQLVDNAESD 570
Query: 2383 PQVTIPTTTLSVSSPMTSPLTSKIEKLPEKKSN------------TTSSLHSLLRDIAVN 2526
P+ + SS ++S S E++P ++ +T+++ LL++IAVN
Sbjct: 571 PRRKDGGGVCTSSSCISSVNISGTEQIPVTGTSVPIGGELVPVKGSTAAIPDLLKNIAVN 630
Query: 2527 PSIWMNILKM---------EHVKSSDDIKSMTQMPNSYSLLGAVPSTIAVPPSSSMLGQM 2679
P++ +NILKM K D KS T NS S+LG VP V + S +
Sbjct: 631 PTMLINILKMGQQQRLALEAQQKPVDPAKSTTYPLNSNSMLGTVP---VVGAAHSGILPR 687
Query: 2680 SAGIVQSPSQAVSTEEPGKVRMKPRDPRRILHNCAPQKGVTTASDQPKINAS---FSSAM 2850
AG VQ Q + ++ GK+RMKPRDPRR+LHN A Q+ + S+ K N + +
Sbjct: 688 PAGTVQVSPQLGTADDLGKIRMKPRDPRRVLHNNALQRNGSMGSEHLKTNLTSIPINQET 747
Query: 2851 MCSLSTARHEDQLEXXXXXXXXXXPPDITMQFTSNLRNIADIMSVSQECMPSSVLPQIPS 3030
+ + + E Q+E PDI+M FT NL+NIADI+SVS ++PQ P+
Sbjct: 748 KDNQNLQKQEGQVEKKPVPLQSLALPDISMPFTKNLKNIADIVSVSHASTSQPLVPQNPA 807
Query: 3031 LQPVQVHQAGMETKGVVADSGNPINGCDLTSEAAIAGPPRPLNANAWSDVEHLFEGFDDK 3210
QP++ S + G AA A P NAW DVEHLFEG++D+
Sbjct: 808 SQPMRT----------TISSSDQFLGIGSAPGAAAAAAAGPRTQNAWGDVEHLFEGYNDQ 857
Query: 3211 QKAAIQRERARRLEEQKKMFAVRKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDR 3390
QKAAIQRERARR+EEQKK+F+ RK NSAKFVEVDP+HDE+LRKKEEQDR
Sbjct: 858 QKAAIQRERARRIEEQKKLFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDR 917
Query: 3391 EKPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLFELHLYTMGNKYYATEMAKLLDPKGEL 3570
EK RHLFRFPHMGMWTKLRPGIWNFLEKASKL+ELHLYTMGNK YATEMAK+LDP G L
Sbjct: 918 EKAHRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGVL 977
Query: 3571 FSGRVISRGDDGEPFDGDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERY 3750
F+GRVISRGDDGEPFDGD+R+PKSKDLEGVLGMES VVI+DDSVRVWPHNKLNLIVVERY
Sbjct: 978 FNGRVISRGDDGEPFDGDERIPKSKDLEGVLGMESGVVIMDDSVRVWPHNKLNLIVVERY 1037
Query: 3751 IYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFAHQSLDEADVRNIL 3930
IYFPCSRRQFGLPGPSLLEIDHDERPEDGTLA SLAVIERIHQNFF H SLDEADVRNIL
Sbjct: 1038 IYFPCSRRQFGLPGPSLLEIDHDERPEDGTLACSLAVIERIHQNFFTHPSLDEADVRNIL 1097
Query: 3931 ASEQRKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTHVVANSLGT 4110
ASEQRKILAGCRIVFSRVFPVGEA PH+HPLWQTAEQFGAVC NQIDE VTHVVANSLGT
Sbjct: 1098 ASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGT 1157
Query: 4111 DKVNWALSRGKFVVHPGWVEASALLYRRANELDFAIK 4221
DKVNWALS G+FVV+PGWVEASALLYRRANE DFAIK
Sbjct: 1158 DKVNWALSTGRFVVYPGWVEASALLYRRANEQDFAIK 1194
>ref|XP_004492029.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like isoform X2 [Cicer arietinum]
Length = 1227
Score = 942 bits (2435), Expect = 0.0
Identities = 610/1302 (46%), Positives = 758/1302 (58%), Gaps = 66/1302 (5%)
Frame = +1
Query: 520 AFLNMEEDYKEQQLVKVEVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXX 699
+FL+ E + + K EV DVEEGEISD+ASV EI+EE F+ + K+
Sbjct: 5 SFLDCENSKNFEGMGK-EVEDVEEGEISDTASVVEISEEDFNKQDVVKVNNNSDSDKAKT 63
Query: 700 XXXXXXXXXXXXXXXXXARVWTMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFV 876
ARVW + DLY KY + SGLYNLAWAQAV NKPL D+FV
Sbjct: 64 GGD--------------ARVWAVHDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFV 109
Query: 877 MMEDDTXXXXXXXXXXXXXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENK 1056
M D E +
Sbjct: 110 MELDSDSNANVVMVDDDEREEG-----------------------------------ELE 134
Query: 1057 DSNVEVKNEVGGDVNELDERERSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQ 1236
+ ++ ++ GG + D E + I++ LE + VA+ +S+ S L LQ
Sbjct: 135 EGEIDGDDDTGGVMVGGDGSETVSESD-IRDFLEGVTVANVAESFAETISRLLRV---LQ 190
Query: 1237 KMVLEG-SFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLF 1413
+L G + SEKD +++LL AI+ ++S+F SM + +E NK ++RL+ + + LF
Sbjct: 191 SKLLSGPAVSEKDYVIRLLYNAIEIVHSVFCSMDNLQKEDNKDNIIRLLYFLKNEHTQLF 250
Query: 1414 SSLQLEEVEAIRSSLQSPADSLSNDN--SNGRK----QVGTTDLHVLLENTNNDSACLTK 1575
S ++E++ + +++ + D+L N NG K + T + L + S+ L
Sbjct: 251 SPEHMKEIQVMITAIDT-VDALGNSVVVGNGEKLDTLDIKTRQIQGLKASELISSSKLVH 309
Query: 1576 CGIESGSAGSLDQTQRNFSLQYSKSGLVNSKQKGVALPLLDLHKDHDADSLPSPTRDLST 1755
+ S L SG N K +GV LPL DLHK HD DSLPSPTR+ +
Sbjct: 310 SNLTEASEALL-------------SGQSNIKGRGVMLPLFDLHKVHDLDSLPSPTREAPS 356
Query: 1756 PLPFEH------GLLKPEWPIPRRT------LDRENPVMHPYETDAVKAVSSYQQKFGRS 1899
P G+ +P P +T LD EN H YETDA+KAVS+YQQKFGRS
Sbjct: 357 FFPVNKLFSVGDGMDRPGLPSAGKTEAVKMELDTENSKNHLYETDALKAVSTYQQKFGRS 416
Query: 1900 SFFMSDNLPSPTPS---EEGDTTGDXXXXXXXXXXXXHTGVNTLISGQPMVSSTSPMEAL 2070
S+F D PSPTPS EEG + T L+ P+ S++ ++
Sbjct: 417 SYFTDDKFPSPTPSGDCEEGVADANEEVSSASIAVSL-TSSKPLLDQMPVSSTSVDRSSM 475
Query: 2071 AGPEISDSRIAVPVSSFGNPVLKSSSAKSRDPRLRLANLDAGARSQSPSFVGSVESKLEY 2250
G + +SRI SS PV +SA+SRDPRLR N DA A + S + K+E
Sbjct: 476 HG--LINSRIEA-ASSVTYPV--KTSARSRDPRLRFINSDASALDLNQSLGTNNMPKVEN 530
Query: 2251 FGMMSTRKPKTAEERVSDGPALKRQRNELSDPK------TTMP---------------II 2367
G + +RK KT EE D A KR R+ L + + TM +I
Sbjct: 531 AGRVISRKQKTTEELSLDATAPKRLRSSLENSRHNTREERTMAGNGGWLEENRVAGSHLI 590
Query: 2368 SATSAPQV--TIPTTTLSVSSPMTSPLTSKIEKLPEKKSNTTSSLHSLLRDIAVNPSIWM 2541
Q T T+S SS ++ ++ E+ P SNT ++L LL++IAVNP++ +
Sbjct: 591 ERNHLMQKGETELKKTMSTSSGYSTVTSNGNEQAPVTVSNTAAALPGLLKNIAVNPTMLL 650
Query: 2542 NILKME--------HVKSSDDIKSMTQMPNSYSLLGAVPSTIAVPPSSSMLGQMSAGIVQ 2697
NIL + + K D S + NS A +T P ++ L Q S G++
Sbjct: 651 NILLEQQQRLAAEANKKPVDSATSTMHLTNSARGPDATVNT--GPAMTAGLPQSSVGMLP 708
Query: 2698 SPSQAVST-----EEPGKVRMKPRDPRRILHNCAP-QKGVTTASDQPKINASFSSAMMCS 2859
+ +QA S E+ GK+RMKPRDPRRILH + QK +T S+Q K S +S +
Sbjct: 709 ASTQAASMAHTLLEDSGKIRMKPRDPRRILHGSSSLQKSGSTGSEQSKSVVSPTSNNQGN 768
Query: 2860 ---LSTARHEDQLEXXXXXXXXXXPPDITMQFTSNLRNIADIMSVSQECMPSSVLP---Q 3021
++ + + ++E PDIT QFT NL+NIADIMSVSQE PS+ LP Q
Sbjct: 769 GGNVNAQKLDVRVETKLAPTQSSAQPDITRQFTKNLKNIADIMSVSQE--PSTQLPATTQ 826
Query: 3022 IPSLQPVQVHQAGMETKGVVADSGNPINGCDLTSEAAIAGPPRPLNANAWSDVEHLFEGF 3201
S V E K V +S N +G E G R + + W+DVEHLFEG+
Sbjct: 827 NVSSASVPFTLDKAELKSGVPNSQNLQDGVGSAPETCAPGSSR--SQSTWADVEHLFEGY 884
Query: 3202 DDKQKAAIQRERARRLEEQKKMFAVRKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKEE 3381
D+KQKAAIQRERARRLEEQ KMFA +K NSAKFVEVDP+HDE+LRKKEE
Sbjct: 885 DEKQKAAIQRERARRLEEQNKMFASKKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEE 944
Query: 3382 QDREKPQRHLFRFPHMGMWTKLRPGIWNFLEKASKLFELHLYTMGNKYYATEMAKLLDPK 3561
QDREKP RHLFRFPHMGMWTKLRPG+WNFLEKASKL+ELHLYTMGNK YATEMAK+LDPK
Sbjct: 945 QDREKPHRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPK 1004
Query: 3562 GELFSGRVISRGDDGEPFDGDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVV 3741
G LF+GRVISRGDD E DGD+R PKSKDLEGV+GMES+VVI+DDSVRVWPHNKLNLIVV
Sbjct: 1005 GVLFAGRVISRGDDTESVDGDERAPKSKDLEGVMGMESSVVIVDDSVRVWPHNKLNLIVV 1064
Query: 3742 ERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFAHQSLDEADVR 3921
ERY YFPCSRRQFGLPGPSLLEIDHDERPE GTLASSLAVIERIHQNFFA QSL+E DVR
Sbjct: 1065 ERYTYFPCSRRQFGLPGPSLLEIDHDERPEAGTLASSLAVIERIHQNFFASQSLEEVDVR 1124
Query: 3922 NILASEQRKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTHVVANS 4101
NILASEQRKILAGCRIVFSRVFPVGEA PH+HPLWQTAEQFGAVCINQID+ VTHVVANS
Sbjct: 1125 NILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCINQIDDQVTHVVANS 1184
Query: 4102 LGTDKVNWALSRGKFVVHPGWVEASALLYRRANELDFAIKQQ 4227
LGTDKVNWA+S G+FVVHPGWVEASALLYRRANE DFAIK +
Sbjct: 1185 LGTDKVNWAISTGRFVVHPGWVEASALLYRRANEQDFAIKPE 1226
>ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
gi|557541054|gb|ESR52098.1| hypothetical protein
CICLE_v10030535mg [Citrus clementina]
Length = 1208
Score = 941 bits (2433), Expect = 0.0
Identities = 588/1250 (47%), Positives = 738/1250 (59%), Gaps = 70/1250 (5%)
Frame = +1
Query: 580 DVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXXARV 759
DVEEGEISD+ASVEEI+EE F KQ + ARV
Sbjct: 4 DVEEGEISDTASVEEISEEDFKIKQ-----------EEVVKVVKETKPIKVGGGEAAARV 52
Query: 760 WTMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXX 936
WTMRDLY KY + GL+NLAWAQAV NKPL ++FVM +
Sbjct: 53 WTMRDLYNKYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDD------------- 99
Query: 937 XXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVEN---KDSNVEVKNEVG----GD 1095
V VVE DS E++ E G G+
Sbjct: 100 ---------VSKRSSPASSVASVNSGAAAGKDDKKVVEKVVIDDSGDEIEKEEGELEEGE 150
Query: 1096 VN-ELDERERSKRVNLIKEELESLNVADAKK----------SYDRLCSSLETTAVSLQKM 1242
+ +L+ K +KEE++ +NV ++ S++ +CS LE T SL+++
Sbjct: 151 IELDLESESNEKVSEQVKEEMKLINVESIREALESVLRGDISFEGVCSKLEFTLESLREL 210
Query: 1243 VLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSL 1422
V E + KD L+QL +A+Q+++S+F SM+ +L+EQNK IL RL++ + S +PPLFSS
Sbjct: 211 VNENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSVIKSHEPPLFSSN 270
Query: 1423 QLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTDLHVLLENTNNDSACLTKCGIESGSAG 1602
Q++E+EA+ SSL + A+ D V D +++ EN ND K +
Sbjct: 271 QIKEMEAMLSSLVTRANDKEKDML-AMHGVNGKDSNIVTENAVNDLNFKEKVPLP----- 324
Query: 1603 SLDQTQRNFSLQYSKSGLVNSKQKGVALPLLDLHKDHDADSLPSPTRDLSTPLPFEHGLL 1782
+D +N L+ SK G + +GV LPLLD HK HD DSLPSPTR+ + +P + L+
Sbjct: 325 -VDSLMQNKPLEASKPGPPGYRSRGVLLPLLDPHKVHDVDSLPSPTRETTPSVPVQRALV 383
Query: 1783 KPE-----WPIPRRTLDRENPVMHP-YETDAVKAVSSYQQKFGRSSFFMSDNLPSPTPSE 1944
+ W + P YETDA++A SSYQQKFGR+SFFM+ LPSPTPSE
Sbjct: 384 VGDGVVKSWAAAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSFFMNSELPSPTPSE 443
Query: 1945 E-GDTTGDXXXXXXXXXXXXHTG-VNTLISGQPMVSS-----TSPMEALAGPEISDSRIA 2103
E GD GD VN GQ VSS + PM+ + ++ + +
Sbjct: 444 ESGDGDGDTGGEISSATAVDQPKPVNMPTLGQQPVSSQPMDISQPMDISSVQALTTANNS 503
Query: 2104 VPVSSFGNPVLKSSSA-----KSRDPRLRLANLDAGARSQSPSFVGSVESKLEYFG-MMS 2265
P SS NPV+K + KSRDPRLR A+ +A + P+ + K+E G +MS
Sbjct: 504 APASSGYNPVVKPNPVVKAPIKSRDPRLRFASSNALNLNHQPAPILHNAPKVEPVGRVMS 563
Query: 2266 TRKPKTAEERVSDGPALKRQRNE-------------------LSDPKTTMPIISATSAPQ 2388
+RK KT EE V DGPALKRQRN L D P I +
Sbjct: 564 SRKQKTVEEPVLDGPALKRQRNGFENSGVVRDEKNIYGSGGWLEDTDMFEPQIMNRNLLV 623
Query: 2389 VTIPTTTLSVSSPMTSPLTSKI--------EKLPEKKSNTTSSLHSLLRDIAVNPSIWMN 2544
+ + + + + TSP+TS E P +TT SL +LL+DIAVNP++ +N
Sbjct: 624 DSAESNSRKLDNGATSPITSGTPNVVVSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLN 683
Query: 2545 ILKM-EHVKSSDDIKSMTQMPNSYSLLGAVPSTIAVPPSSSMLGQMSAGIVQSPSQAVST 2721
ILKM + K + D + + + ++ +PS+I P S+ + +GI+ P
Sbjct: 684 ILKMGQQQKLAADAQQKSNDSSMNTMHPPIPSSI---PPVSVTCSIPSGILSKPM----- 735
Query: 2722 EEPGKVRMKPRDPRRILHNCAPQK----GVTTASDQPKINASFSSAMMCSLSTARHEDQL 2889
+E GKVRMKPRDPRR+LH A Q+ G +D P +A + +L+ +
Sbjct: 736 DELGKVRMKPRDPRRVLHGNALQRSGSLGPEFKTDGP--SAPCTQGSKENLNFQKQLGAP 793
Query: 2890 EXXXXXXXXXXPPDITMQFTSNLRNIADIMSVSQECMPSSVLPQIPSLQPVQVHQAGMET 3069
E PDIT QFT NL++IAD MSVSQ ++ Q +QP Q+ ++G +
Sbjct: 794 EAKPVLSQSVLQPDITQQFTKNLKHIADFMSVSQPLTSEPMVSQNSPIQPGQI-KSGADM 852
Query: 3070 KGVVADSGNPINGCDLTSEAAIAGPPRPLNANAWSDVEHLFEGFDDKQKAAIQRERARRL 3249
K VV + + G T AGP +AW DVEHLFEG+DD+QKAAIQ+ER RRL
Sbjct: 853 KAVVTNHDDKQTG---TGSGPEAGPVGAHPQSAWGDVEHLFEGYDDQQKAAIQKERTRRL 909
Query: 3250 EEQKKMFAVRKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFPHM 3429
EEQKKMF+ RK NSAKF EVDP+HDE+LRKKEEQDREKP RHLFRFPHM
Sbjct: 910 EEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHM 969
Query: 3430 GMWTKLRPGIWNFLEKASKLFELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGE 3609
GMWTKLRPGIW FLE+ASKLFE+HLYTMGNK YATEMAK+LDPKG LF+GRVISRGDDG+
Sbjct: 970 GMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGD 1029
Query: 3610 PFDGDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLP 3789
PFDGD+RVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERY YFPCSRRQFGL
Sbjct: 1030 PFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLL 1089
Query: 3790 GPSLLEIDHDERPEDGTLASSLAVIERIHQNFFAHQSLDEADVRNILASEQRKILAGCRI 3969
GPSLLEIDHDER EDGTLASSL VIER+H+ FF+HQSLD+ DVRNILA+EQRKILAGCRI
Sbjct: 1090 GPSLLEIDHDERSEDGTLASSLGVIERLHKIFFSHQSLDDVDVRNILAAEQRKILAGCRI 1149
Query: 3970 VFSRVFPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTHVVANSLGTDKV 4119
VFSRVFPVGEA PH+HPLWQTAEQFGAVC ID+ VTHVVANSLGTDKV
Sbjct: 1150 VFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKV 1199
>gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Morus
notabilis]
Length = 1301
Score = 938 bits (2424), Expect = 0.0
Identities = 559/1095 (51%), Positives = 695/1095 (63%), Gaps = 59/1095 (5%)
Frame = +1
Query: 1057 DSNVEVKNEVGGDVNELDER--ERSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAVS 1230
D N E +N VGG E+D R E KRV+LI E L S+NV +A+KS++ +CS L+ T S
Sbjct: 180 DLNCEAEN-VGG--LEVDSRRDELEKRVDLIWETLGSVNVVNAEKSFEEVCSRLQRTLES 236
Query: 1231 LQKMVLEGSFS--EKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKP 1404
L+ ++ E FS KD ++Q+ +TAIQ + S+F SMS+ +EQ K L RL V +
Sbjct: 237 LRGVLSEKEFSFPTKDVVIQMSITAIQVVNSVFCSMSVNQKEQKKETLSRLFCSVKNCGT 296
Query: 1405 PLFSSLQLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTD-LHVL---LENTNNDSACLT 1572
PLFS Q +E+E + SSL S+ S+ K+ + LH + L N N ++A +
Sbjct: 297 PLFSPEQTKEIELMISSLNPLNVLPSSGASDKEKETQIIERLHEMDSNLTNANAENASIE 356
Query: 1573 KCGIE--SGSAGSLDQTQRNFSLQYSKSGLVNSKQKGVALPLLDLHKDHDADSLPSPTRD 1746
+ ++ S+ + + + G + K +G+ LPLLDLHKDHDADSLPSPTR+
Sbjct: 357 RTSVKLPQDCVASVVHSNPITLPELLRPGTLAFKGRGLLLPLLDLHKDHDADSLPSPTRE 416
Query: 1747 LST------PLPFEHGLLKPEWPIPRRTLDRENPVMHPYETDAVKAVSSYQQKFGRSSFF 1908
+ PL G++KP + E +H YETDA+KAVS+YQQKFGR SF
Sbjct: 417 APSCFPVYKPLGVADGIIKPVSTTAKVAPGAEESRLHRYETDALKAVSTYQQKFGRGSFL 476
Query: 1909 MSDNLPSPTPSEEGDTTGDXXXXXXXXXXXXHTGVNTLISGQP-MVSSTSPMEA--LAGP 2079
MSD LPSPTPSEE D D + + +P +V+S+ P+ + + GP
Sbjct: 477 MSDRLPSPTPSEECDEEDDINQEVSSSLTSGNLRTPAIPILRPSVVTSSVPVSSPTMQGP 536
Query: 2080 EISDSRIAVPVSSFGNPVLKSSSAKSRDPRLRLANLDAGARSQSPSFVGSVES--KLEYF 2253
+ + A PV S N +K+S A+SRDPRLR AN DAGA + + +V + K+E
Sbjct: 537 IAAKN--AAPVGSGSNSTMKAS-ARSRDPRLRFANSDAGALDLNQRPLTAVHNGPKVEPG 593
Query: 2254 GMMSTRKPKTAEERVSDGPALKRQRNELSDPKTTMPIISA---------TSAPQVTIPTT 2406
S+RK + EE DGPALKRQR+ K + S T+ PQ+
Sbjct: 594 DPTSSRKQRIVEEPNLDGPALKRQRHAFVSAKIDVKTASGVGGWLEDNGTTGPQIMNKNQ 653
Query: 2407 TLS------------VSSPMTS--PLTSKIEKLPEKKSNTTSSLHSLLRDIAVNPSIWMN 2544
+ V+ P+ + P K E++P ++T +L ++L+DIAVNP+I+M+
Sbjct: 654 LVENAEADPRKSIHLVNGPIMNNGPNIGK-EQVPVTGTSTPDALPAILKDIAVNPTIFMD 712
Query: 2545 ILKM---------EHVKSSDDIKSMTQMPNSYSLLGAVPSTIAVPPSSSMLGQMSAGIVQ 2697
IL + + SD K+ T P + S+LGA P P +S + Q A +
Sbjct: 713 ILNKLGQQQLLAADAQQKSDSSKNTTHPPGTNSILGAAPLVNVAPSKASGILQTPAVSLP 772
Query: 2698 SPSQAVST---EEPGKVRMKPRDPRRILHNCAPQKGVTTASDQPK---INASFSSAMMCS 2859
+ SQ + +E GK+RMKPRDPRR+LH QK + +Q K + S + +
Sbjct: 773 TTSQVATASMQDELGKIRMKPRDPRRVLHGNMLQKSWSLGHEQFKPIVSSVSCTPGNKDN 832
Query: 2860 LSTARHEDQLEXXXXXXXXXXPPDITMQFTSNLRNIADIMSVSQECMPSSVLPQIPSLQP 3039
L+ E Q + PDI QFT NLRNIAD+MSVSQ + + Q S QP
Sbjct: 833 LNGPVQEGQADKKQVPSQLVVQPDIARQFTKNLRNIADLMSVSQASTSPATVSQNLSSQP 892
Query: 3040 VQVHQAGMETKGVVADSGNPINGCDLTSEAAIAGPPRPLNANAWSDVEHLFEGFDDKQKA 3219
+ V + K VV +S + +G + T E +A P R NAW DVEHLFEG+DD+QKA
Sbjct: 893 LPVKPDRGDVKAVVPNSEDQHSGTNSTPETTLAVPSR--TPNAWGDVEHLFEGYDDEQKA 950
Query: 3220 AIQRERARRLEEQKKMFAVRKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKP 3399
AIQRERARRLEEQKKMF K NSAKFVEVD +HDE+LRKKEEQDREKP
Sbjct: 951 AIQRERARRLEEQKKMFDAHKLCLVLDLDHTLLNSAKFVEVDSVHDEILRKKEEQDREKP 1010
Query: 3400 QRHLFRFPHMGMWTKLRPGIWNFLEKASKLFELHLYTMGNKYYATEMAKLLDPKGELFSG 3579
QRHLFRFPHMGMWTKLRPG+WNFLEKASKL+ELHLYTMGNK YATEMAK+LDP G LFSG
Sbjct: 1011 QRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPMGTLFSG 1070
Query: 3580 RVISRGDDGEPFDGDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYF 3759
RVISRGDDG+PFDGD+RVPKSKDLEGVLGMES+VVIIDDSVRVWPHNKLNLIVVERY YF
Sbjct: 1071 RVISRGDDGDPFDGDERVPKSKDLEGVLGMESSVVIIDDSVRVWPHNKLNLIVVERYTYF 1130
Query: 3760 PCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFAHQSLDEADVRNILASE 3939
PCSRRQFGLPGPSLLEIDHDERPE GTLASSLAVIE+IHQNFF+H SLDE DVRNILASE
Sbjct: 1131 PCSRRQFGLPGPSLLEIDHDERPEQGTLASSLAVIEKIHQNFFSHHSLDEVDVRNILASE 1190
Query: 3940 QRKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTHVVANSLGTDKV 4119
QRKILAGCRIVFSRVFPV E PH+HPLWQTAEQFGAVC QID+ VTHVVANS GTDKV
Sbjct: 1191 QRKILAGCRIVFSRVFPVSEVNPHLHPLWQTAEQFGAVCTTQIDDQVTHVVANSPGTDKV 1250
Query: 4120 NWALSRGKFVVHPGW 4164
NWAL+ GKF VHPGW
Sbjct: 1251 NWALANGKFAVHPGW 1265
Score = 82.0 bits (201), Expect = 3e-12
Identities = 49/105 (46%), Positives = 58/105 (55%)
Frame = +1
Query: 574 VHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXXA 753
V DVEEGEISDSASVEEI+EE F+ ++ S +
Sbjct: 10 VEDVEEGEISDSASVEEISEEDFNKQEGNGTGSGKVMSVSDSNSKESKFGD--------S 61
Query: 754 RVWTMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMED 888
RVWTMRDLY + +GLYNLAWAQAV NKPL ++FVM D
Sbjct: 62 RVWTMRDLYANYPGFRGYTTGLYNLAWAQAVQNKPLNEIFVMDVD 106
>ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Fragaria vesca subsp. vesca]
Length = 1230
Score = 936 bits (2419), Expect = 0.0
Identities = 592/1285 (46%), Positives = 753/1285 (58%), Gaps = 68/1285 (5%)
Frame = +1
Query: 571 EVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXX 750
EV DVEEGEI DS SVEEI+EE F ++
Sbjct: 9 EVVDVEEGEIPDSNSVEEISEEDFVKQESKAVEPKSNGGSGDG----------------- 51
Query: 751 ARVWTMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXX 930
AR WT ++ + GL NLAWAQAV NKP D+ V ++ D
Sbjct: 52 ARFWTFHEVLAHPHFRGIGGGGLANLAWAQAVQNKPFNDLLVKLDSDEKSKQQQQQRSSV 111
Query: 931 XXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGGDVNELD 1110
VI VE ++ +E + E+G D +E
Sbjct: 112 SSGNEKV----VIIDSGDEMD-----------------VEKEEEELE-EGEIGFD-SECG 148
Query: 1111 ERERS----------KRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKMVLEGSF 1260
+ +++ KRVNL++E LESL + +A+KS+ +C + SL+ ++ E +
Sbjct: 149 DNDKAAGSVGNGVWEKRVNLLREALESLTITEAEKSFGDVCHRFLDSLESLRGVLSEINV 208
Query: 1261 SEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEVE 1440
S K+ LVQ L A++ + S+F SMS +EQNK +L R+++ S P F + QL+E+E
Sbjct: 209 STKEALVQQLFNAVRAISSVFRSMSADQKEQNKDVLSRILSSAKS-DPSPFPAEQLKEIE 267
Query: 1441 AIRSSLQSPADSLSNDNSNGRKQVGTTDLHVLLENTNNDSACLTKCGIESGSAGSLDQTQ 1620
+ SS+ SP G K+ G ++ + + T++D++ + + +A + TQ
Sbjct: 268 VMSSSMDSP------QTKAGTKENGIQCINGVYK-TDSDTSGANASHVFTYAANTGSDTQ 320
Query: 1621 -------RNFSLQYSKSGLVNSKQKGVALPLLDLHKDHDADSLPSPTRD------LSTPL 1761
N S + +SG + K +G+ LPLLDLH DHD DSLPSPTR+ P+
Sbjct: 321 VSVVHSNPNISSEVPRSGSSSFKGRGLMLPLLDLHMDHDEDSLPSPTREPPACFPAQKPV 380
Query: 1762 PFEHGLLKPE-WPIPRRTLDRENPVMHPYETDAVKAVSSYQQKFGRSSFFMSDNLPSPTP 1938
E+G++K W R LD E MH YET+A+KAVSSYQQKF R+SF S+ LPSPTP
Sbjct: 381 VVENGMVKKSGWETARAALDVEGSKMHVYETEALKAVSSYQQKFSRNSFLTSE-LPSPTP 439
Query: 1939 SEEGDTTGDXXXXXXXXXXXXHTGVNTL---ISGQPMVSSTSPMEALAGPE----ISDSR 2097
SEE GD V T +SG+ +VSS P L G + ++
Sbjct: 440 SEEEGDNGDDAAVGEVSSSSASNNVRTPQPPVSGRQVVSSV-PATTLPGSSGMHGLITAK 498
Query: 2098 IAVPVSSFGNPVLKSSSAKSRDPRLRLANLDAGARS--QSPSFVGSVESKLEYFGMMSTR 2271
A PVS G+ + SSAKSRDPRLR AN DAGA + Q S K++ +S+R
Sbjct: 499 TASPVS-LGSNMPNKSSAKSRDPRLRFANSDAGALTLNQQSSIQVHNAPKVDSVITLSSR 557
Query: 2272 KPKTAEERVSDGPALKRQRNE-----------------LSDPKTTMPII---SATSAPQV 2391
K K+ E+ DGP KRQR L D + P + + T +
Sbjct: 558 KHKSPEDSNFDGPESKRQRGANSVVGWGAKTSFGNGVWLEDGSSVGPHLINRNQTVEKKE 617
Query: 2392 TIPTTTLSVSS-PMTSPLTSKIEKLPEKK----SNTTSSLHSLLRDIAVNPSIWMNILKM 2556
P ++VSS P T S + +K + + SL ++ +DIAVNP++ +NILK+
Sbjct: 618 ADPRKMVNVSSSPGTVEGNSNGQNTANEKVPLVAPSLVSLPAIFKDIAVNPTMLVNILKL 677
Query: 2557 EHVKSSDDIKSMTQMPNSYSLLGAVPSTIAVPPSSSMLGQMS--AGIVQSP---SQAVST 2721
+ + P L PS+ ++P +++++ S +G + +P SQ T
Sbjct: 678 AEAQQN------AAAPARKESLTYPPSSSSIPGTAALVNDPSKTSGALLTPTICSQKTPT 731
Query: 2722 EEPGKVRMKPRDPRRILHNCAPQKGVTTASDQPKINA---SFSSAMMCSLSTARHEDQLE 2892
+E GK+RMK RDPRR+LH A Q + +Q + S S A ++ + + Q +
Sbjct: 732 DEAGKIRMKLRDPRRLLHGNALQNSGSVGHEQSRNIVPPLSSSQANNDDMNGKKQDSQAD 791
Query: 2893 XXXXXXXXXX--PPDITMQFTSNLRNIADIMSVSQECMPSSVLPQIPSLQPVQVHQAGME 3066
PDI QFT NL+NIADI+SVSQ + Q S + + ++ ++
Sbjct: 792 NNSVTSQSGALGAPDIASQFTKNLKNIADIISVSQVSTSPATPSQNLSTELISINPDNVD 851
Query: 3067 TKGVVADSGNPINGCDLTSEAAIAGPPRPLNANAWSDVEHLFEGFDDKQKAAIQRERARR 3246
K +G+ I+ T+ A P W DVEHLFEG+DDKQKAAIQRERARR
Sbjct: 852 LKAEEQHTGS-ISASVPTAAGASRSPA------TWGDVEHLFEGYDDKQKAAIQRERARR 904
Query: 3247 LEEQKKMFAVRKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFPH 3426
+EEQKKMFA K NSAKFVEVDP+HDE+LRKKEEQDR++PQRHLFRF H
Sbjct: 905 IEEQKKMFAAHKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDRKEPQRHLFRFQH 964
Query: 3427 MGMWTKLRPGIWNFLEKASKLFELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDG 3606
MGMWTKLRPG+W FLEKAS LFE+HLYTMGNK YATEMAK+LDP G LF+GRVISRGDDG
Sbjct: 965 MGMWTKLRPGVWKFLEKASHLFEMHLYTMGNKLYATEMAKVLDPTGALFAGRVISRGDDG 1024
Query: 3607 EPFDGDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGL 3786
+P+DGD+RVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERY YFPCSRRQFGL
Sbjct: 1025 DPYDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGL 1084
Query: 3787 PGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFAHQSLDEADVRNILASEQRKILAGCR 3966
GPSLLEIDHDER EDGTLASSLAVIE+IHQ FF+H SLDEADVRNILASEQ+KIL GCR
Sbjct: 1085 LGPSLLEIDHDERHEDGTLASSLAVIEKIHQIFFSHPSLDEADVRNILASEQQKILGGCR 1144
Query: 3967 IVFSRVFPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTHVVANSLGTDKVNWALSRGKF 4146
IVFSRVFPVGE PH+HPLWQTAEQFGAVC NQID+ VTHVVANSLGTDKVNWALS GK+
Sbjct: 1145 IVFSRVFPVGEVNPHLHPLWQTAEQFGAVCTNQIDDQVTHVVANSLGTDKVNWALSSGKY 1204
Query: 4147 VVHPGWVEASALLYRRANELDFAIK 4221
VVHPGWVEASALLYRRANE DFAIK
Sbjct: 1205 VVHPGWVEASALLYRRANEQDFAIK 1229
>ref|XP_003530482.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Glycine max]
Length = 1261
Score = 935 bits (2416), Expect = 0.0
Identities = 594/1285 (46%), Positives = 738/1285 (57%), Gaps = 68/1285 (5%)
Frame = +1
Query: 571 EVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXX 750
E DVEEGEISD+ASVEEI+ E F+ + S
Sbjct: 21 EAEDVEEGEISDTASVEEISAEDFNKQDVKLLNNNNKPNGSD------------------ 62
Query: 751 ARVWTMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXX 927
ARVW + DLY KY + SGLYNLAWAQAV NKPL D+FVM D
Sbjct: 63 ARVWAVHDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMEVDSDANANSNRNSSH 122
Query: 928 XXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGGDVNEL 1107
V+ D++ E + E V +
Sbjct: 123 RLASVAVNPKDVVVVDVDKEEGELEEGEI--------------DADAEPEGEAESVVVAV 168
Query: 1108 DERERSKRVNLIKEE---------LESLNVADAKKSYDRLCSSLETTAVSLQKMVLEGSF 1260
+ E+ V + + LE + VA+ +S+ + CS L+ T L +++ +
Sbjct: 169 SDSEKLDDVKMDVSDSEQLGARGVLEGVTVANVVESFAQTCSKLQNT---LPEVLSRPAG 225
Query: 1261 SEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPP-LFSSLQLEEV 1437
SEKD LV+L A + +YS+F SM +EQNK +LRL++ V + LFS ++E+
Sbjct: 226 SEKDDLVRLSFNATEVVYSVFCSMDSSEKEQNKDSILRLLSFVKDQQQAQLFSPEHVKEI 285
Query: 1438 EAIRSSLQSPADSLSNDNSNGRKQVGTTDLHVLLEN----------TNNDSACLTKCGIE 1587
+ + +++ S ++++ K++ TT++ + T + A I
Sbjct: 286 QGMMTAIDSVGALVNSEAIGKEKELQTTEIKTQENSAVEVQIHEIKTQENQAVEAAELIS 345
Query: 1588 SGSAGSLDQTQRNFSLQYSKSGLVNSKQKGVALPLLDLHKDHDADSLPSPTRDLSTPLPF 1767
D T + +L++ ++ + K +GV LPLLDLHKDHDADSLPSPTR+ + P
Sbjct: 346 YSKPLHRDITGTSQALKFGQNSI---KGRGVLLPLLDLHKDHDADSLPSPTREAPSCFPV 402
Query: 1768 EHGLLKPEWPI------PRRTLDRENPVMHPYETDAVKAVSSYQQKFGRSSFFMSDNLPS 1929
L E + + LD E H YETDA+KAVS+YQQKFGRSS F +D PS
Sbjct: 403 NKLLSVGESMVRSGSASAKMELDSEGSKFHLYETDALKAVSTYQQKFGRSSLFTNDKFPS 462
Query: 1930 PTPSE--EGDTTGDXXXXXXXXXXXXHTGVNTLISGQPMVSSTSPMEALAGPEISDSRIA 2103
PTPS E + T + QP VS+TS + IS A
Sbjct: 463 PTPSGDCEDEVVDTNEEVSSASTGDFLTSTKPTLLDQPPVSATSMDRSSMHGFISSRVDA 522
Query: 2104 VPVSSFGNPVLKSSSAKSRDPRLRLANLDAGARSQSPSFVGSVESKLEYFGMMSTRKPKT 2283
SF PV SSAK+RDPRLR N DA A + + ++ SK+EY G +RK K
Sbjct: 523 TGPGSF--PV--KSSAKNRDPRLRFINSDASAVDNLSTLINNM-SKVEYSGTTISRKQKA 577
Query: 2284 AEERVSDGPALKRQRNELSDPKTTMPIISATSA------------------------PQV 2391
AEE D KR ++ L + + M + S P+
Sbjct: 578 AEEPSLDVTVSKRLKSSLENTEHNMSEVRTGSGGWLEENTGPGAQLIERNHLMDKFGPEA 637
Query: 2392 TIPTTTLSVS---SPMTSPLTSKIEKLPEKKSNTTSSLHSLLRDIAVNPSIWMNILKMEH 2562
T+S S S + + + E+ P SN +SL +LL++ +VNP + +NIL++
Sbjct: 638 KKTLNTVSSSCTGSDNFNATSIRNEQAPITASNVLASLPALLKEASVNPIMLVNILRLAE 697
Query: 2563 V--KSSDDIKSMTQMPNSYSLLGAVPSTIAVPPSSSM-LGQMSAGIVQSPSQAVST---- 2721
KS+D M P S + ST ++ S + L Q S G++ SQ+ ST
Sbjct: 698 AQKKSADSAAIMLLHPTSSNPAMGTDSTASIGSSMATGLLQSSVGMLPVSSQSTSTAQTL 757
Query: 2722 -EEPGKVRMKPRDPRRILH-NCAPQKGVTTASDQPKINASFSSAMMCS---LSTARHEDQ 2886
++ GK+RMKPRDPRRILH N QK ++Q K S S + ++ + E +
Sbjct: 758 QDDSGKIRMKPRDPRRILHTNNTIQKSGDLGNEQFKAIVSPVSNNQRTGDNVNAPKLEGR 817
Query: 2887 LEXXXXXXXXXXPPDITMQFTSNLRNIADIMSVSQECMPSSVLPQIPSLQPVQVHQAGME 3066
++ PDI QFT NL+NIADIMSVSQE + + Q S V + E
Sbjct: 818 VDNKLVPTQSSAQPDIARQFTRNLKNIADIMSVSQESSTHTPVSQNFSSASVPLTSDRGE 877
Query: 3067 TKGVVADSGNPINGCDLTSEAAIAGPPRPLNANAWSDVEHLFEGFDDKQKAAIQRERARR 3246
K VV+ S N D+ S A + + W DVEHLFEG+D++QKAAIQRERARR
Sbjct: 878 QKSVVSSSQNL--QADMASAHETAASVTSRSQSTWGDVEHLFEGYDEQQKAAIQRERARR 935
Query: 3247 LEEQKKMFAVRKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFPH 3426
+EEQ KMFA RK NSAKFVEVDPLHDE+LRKKEEQDREKP RHLFRFPH
Sbjct: 936 IEEQNKMFAARKLCLVLDLDHTLLNSAKFVEVDPLHDEILRKKEEQDREKPHRHLFRFPH 995
Query: 3427 MGMWTKLRPGIWNFLEKASKLFELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDG 3606
MGMWTKLRPGIWNFLEKASKL+ELHLYTMGNK YATEMAK+LDPKG LF+GRVISRGDD
Sbjct: 996 MGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDT 1055
Query: 3607 EPFDGDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGL 3786
+ DG++RVPKSKDLEGVLGMES+VVIIDDSVRVWPHNKLNLIVVERY YFPCSRRQFGL
Sbjct: 1056 DSVDGEERVPKSKDLEGVLGMESSVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGL 1115
Query: 3787 PGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFAHQSLDEADVRNILASEQRKILAGCR 3966
PGPSLLEIDHDERPE GTLASSLAVIE+IHQ FFA QSL+E DVRNILASEQRKILAGCR
Sbjct: 1116 PGPSLLEIDHDERPEAGTLASSLAVIEKIHQIFFASQSLEEVDVRNILASEQRKILAGCR 1175
Query: 3967 IVFSRVFPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTHVVANSLGTDKVNWALSRGKF 4146
IVFSRVFPVGEA PH+HPLWQTAEQFGAVC NQIDE VTHVVANS GTDKVNWAL+ G+F
Sbjct: 1176 IVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEQVTHVVANSPGTDKVNWALNNGRF 1235
Query: 4147 VVHPGWVEASALLYRRANELDFAIK 4221
VVHPGWVEASALLYRRANE DFAIK
Sbjct: 1236 VVHPGWVEASALLYRRANEQDFAIK 1260
>ref|XP_006603006.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Glycine max]
Length = 1257
Score = 932 bits (2409), Expect = 0.0
Identities = 598/1293 (46%), Positives = 754/1293 (58%), Gaps = 59/1293 (4%)
Frame = +1
Query: 520 AFLNMEEDYKEQQLVKVEVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXX 699
+ L+ E+ K +++ K EV DVEEGEISD+ASVEEI+ E F+ + S
Sbjct: 5 SLLDCEKLGKLEKMGK-EVEDVEEGEISDTASVEEISAEDFNKQDVKVLNNNNKPNGSD- 62
Query: 700 XXXXXXXXXXXXXXXXXARVWTMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFV 876
ARVW + DLY KY + SGLYNLAWAQAV NKPL D+FV
Sbjct: 63 -----------------ARVWAVHDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFV 105
Query: 877 MMEDDTXXXXXXXXXXXXXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENK 1056
M D V+ E +
Sbjct: 106 MEVDSDANANSNSNNSNRLASVAVNPKDVVVVDVDKEEGELEEGEIDADAEP-----EGE 160
Query: 1057 DSNVEVKNEVGGDVNELDE--RERSKRVNL-IKEELESLNVADAKKSYDRLCSSLETTAV 1227
+V V V D +LD+ R+ S L ++ LE + VA+ +S+ + CS L+
Sbjct: 161 AESV-VAVPVVSDSEKLDDVKRDVSNSEQLGVRGVLEGVTVANVAESFAQTCSKLQN--- 216
Query: 1228 SLQKMVLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPP 1407
+L +++ + SE+D LV+L A + +YS+F SM + +EQNK +LRL++ V +
Sbjct: 217 ALPEVLSRPADSERDDLVRLSFNATEVVYSVFCSMDSLKKEQNKDSILRLLSFVKDQQQA 276
Query: 1408 -LFSSLQLEEVEAIRSSLQSPADSLSNDNSNGRKQVGTTDLHVLLENTNNDSACLTKCGI 1584
LFS ++E++ + +++ +L N + G+++ T + T + A I
Sbjct: 277 QLFSPEHIKEIQGMMTAIDY-FGALVNSEAIGKEKELQTTVQTHEIKTQENQAVEAAELI 335
Query: 1585 ESGSAGSLDQTQRNFSLQYSKSGLVNSKQKGVALPLLDLHKDHDADSLPSPTRDLSTPLP 1764
D + +L++ ++ + K +GV LPLLDLHKDHDADSLPSPTR+ + P
Sbjct: 336 SYNKPLHSDIIGASHALKFGQNSI---KGRGVLLPLLDLHKDHDADSLPSPTREAPSCFP 392
Query: 1765 FEHGL-------------LKPEWPIPRRTLDRENPVMHPYETDAVKAVSSYQQKFGRSSF 1905
L KPE + LD E H YETDA+KAVS+YQQKFGRSS
Sbjct: 393 VNKLLSVGEPMVSSGSAAAKPE--SGKMELDSEGSKFHLYETDALKAVSTYQQKFGRSSL 450
Query: 1906 FMSDNLPSPTPSEEGDTTGDXXXXXXXXXXXXHTGVNTLISGQPMVSSTSPMEALAGPEI 2085
F +D PSPTPS + + D TG + L S +P + P+ A +
Sbjct: 451 FTNDKFPSPTPSGDCE---DEIVDTNEEVSSASTG-DFLTSTKPTLLDLPPVSATSTDRS 506
Query: 2086 S-DSRIAVPVSSFGNPVLK-SSSAKSRDPRLRLANLDAGARSQSPSFVGSVESKLEYFGM 2259
S I+ V + G L SSAK+RDPRLR N DA A + + ++ K+EY G
Sbjct: 507 SLHGFISSRVDAAGPGSLPVKSSAKNRDPRLRFVNSDASAVDNPSTLIHNMP-KVEYAGT 565
Query: 2260 MSTRKPKTAEERVSDGPALKRQRNELSDPKTTMPIISATSA------------------- 2382
+RK K AEE D KRQ++ L + + M +
Sbjct: 566 TISRKQKAAEEPSLDVTVSKRQKSPLENTEHNMSEVRTGIGGWLEEHTGPGAQFIERNHL 625
Query: 2383 -------PQVTIPTTTLSVSSPMTSPLTS-KIEKLPEKKSNTTSSLHSLLRDIAVNPSIW 2538
PQ T+ T + S + TS + E+ P SN +SL +LL+ AVNP++
Sbjct: 626 MDKFGPEPQKTLNTVSSSCTGSDNFNATSIRNEQAPITSSNVLASLPALLKGAAVNPTML 685
Query: 2539 MNILKMEHV--KSSDDIKSMTQMPNSYSLLGAVPSTIAVPPSSSM-LGQMSAGIVQSPSQ 2709
+N+L++ KS+D +M P S + ST ++ S + L Q S G++ SQ
Sbjct: 686 VNLLRIAEAQKKSADSATNMLLHPTSSNSAMGTDSTASIGSSMATGLLQSSVGMLPVSSQ 745
Query: 2710 AVST-----EEPGKVRMKPRDPRRILH-NCAPQKGVTTASDQPKI---NASFSSAMMCSL 2862
+ S ++ GK+RMKPRDPRRILH N QK ++Q K S + ++
Sbjct: 746 STSMTQTLQDDSGKIRMKPRDPRRILHTNNTIQKSGNLGNEQFKAIVSPVSNNQGTGDNV 805
Query: 2863 STARHEDQLEXXXXXXXXXXPPDITMQFTSNLRNIADIMSVSQECMPSSVLPQIPSLQPV 3042
+ + E +++ PDI QF NL+NIADIMSVSQE + + QI S V
Sbjct: 806 NAQKLEGRVDSKLVPTQPSAQPDIARQFARNLKNIADIMSVSQESSTHTPVAQIFSSASV 865
Query: 3043 QVHQAGMETKGVVADSGNPINGCDLTSEAAIAGPPRPLNANAWSDVEHLFEGFDDKQKAA 3222
+ E K VV++S N G E A +G R + N W DVEHLFEG+D++QKAA
Sbjct: 866 PLTSDRGEQKSVVSNSQNLEAGMVSAHETAASGTCR--SQNTWGDVEHLFEGYDEQQKAA 923
Query: 3223 IQRERARRLEEQKKMFAVRKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPQ 3402
IQRERARR+EEQ KMFA RK NSAKFVEVDP+HDE+LRKKEEQDREKP
Sbjct: 924 IQRERARRIEEQNKMFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPH 983
Query: 3403 RHLFRFPHMGMWTKLRPGIWNFLEKASKLFELHLYTMGNKYYATEMAKLLDPKGELFSGR 3582
RHLFRFPHMGMWTKLRPGIWNFLEKASKL+ELHLYTMGNK YATEMAK+LDPKG LF+GR
Sbjct: 984 RHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGLLFAGR 1043
Query: 3583 VISRGDDGEPFDGDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFP 3762
VISRGDD + DG++R PKSKDLEGVLGMES+VVIIDDSVRVWPHNKLNLIVVERY YFP
Sbjct: 1044 VISRGDDTDSVDGEERAPKSKDLEGVLGMESSVVIIDDSVRVWPHNKLNLIVVERYTYFP 1103
Query: 3763 CSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFAHQSLDEADVRNILASEQ 3942
CSRRQFGLPGPSLLEIDHDERPE GTLASSLAVIE+IHQ FFA +SL+E DVRNILASEQ
Sbjct: 1104 CSRRQFGLPGPSLLEIDHDERPEAGTLASSLAVIEKIHQIFFASRSLEEVDVRNILASEQ 1163
Query: 3943 RKILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTHVVANSLGTDKVN 4122
RKILAGCRIVFSRVFPVGEA PH+HPLWQTAEQFGA C NQIDE VTHVVANS GTDKVN
Sbjct: 1164 RKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAFCTNQIDEQVTHVVANSPGTDKVN 1223
Query: 4123 WALSRGKFVVHPGWVEASALLYRRANELDFAIK 4221
WAL+ G+FVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1224 WALNNGRFVVHPGWVEASALLYRRANEQDFAIK 1256
>ref|XP_002304714.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
gi|550343307|gb|EEE79693.2| hypothetical protein
POPTR_0003s16280g [Populus trichocarpa]
Length = 1030
Score = 919 bits (2376), Expect = 0.0
Identities = 539/1043 (51%), Positives = 653/1043 (62%), Gaps = 79/1043 (7%)
Frame = +1
Query: 1330 MSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEVEAIRSSLQSPADSLSNDNSNGRKQ 1509
M+ L+EQNK + +R ++ V S P FS +E+E + SSL S D LS+ + ++
Sbjct: 1 MNQKLKEQNKGVFMRFLSLVNSHDPSFFSPEHTKEIELMVSSLDSH-DILSSSRAGEERE 59
Query: 1510 VGTTDLHVLLENTNNDSAC------LTKCGIESGSAGSLDQTQRNFSLQYSKSGLVNSKQ 1671
T + + +NDS LT +A S + NFS++ K G+ + K
Sbjct: 60 ---TQVSGKVNERDNDSLSKTAGYDLTTMNRLPSAAESFVHNKPNFSIEPPKPGVPSFKS 116
Query: 1672 KGVALPLLDLHKDHDADSLPSPTRDLSTPLPFEH------GLLKPEWPIPRRTLDRENPV 1833
+GV LPLLDL K HD DSLPSPTR+ + P + G++ P+P+ E P
Sbjct: 117 RGVLLPLLDLKKFHDEDSLPSPTRETAPSFPVQRLLPIGDGMISSGLPVPKVASITEEPR 176
Query: 1834 MHPYETDAVKAVSSYQQKFGRSSFFMSDNLPSPTPSEE-----GDTTGDXXXXXXXXXXX 1998
+HPYETDA+KAVSSYQ+KF +SFF ++ LPSPTPSEE GDT G+
Sbjct: 177 VHPYETDALKAVSSYQKKFNLNSFFTNE-LPSPTPSEESGNGDGDTAGEVSSSSTVNYRT 235
Query: 1999 XHTGVNTLISGQPMVSSTSPMEALAGPE----------ISDSRIAVPVSSFGNPVLKSSS 2148
+ V+ S P S P P + +R + PVSS + +K+S
Sbjct: 236 VNPPVSDRKSASPSPSPPPPPPPPPPPPPHLNNSSIRVVIPTRNSAPVSSGTSSTVKAS- 294
Query: 2149 AKSRDPRLRLANLDAGARSQSPSFVGSVES--KLEYFGMMSTRKPKTAEERVSDGPALKR 2322
AKSRDPRLR N DA A Q+ + V + + E G ++ + + EE V DG +LKR
Sbjct: 295 AKSRDPRLRYVNTDASALDQNQRTLLMVNNPPRAEPSGAIAGSRKQKIEEDVLDGTSLKR 354
Query: 2323 QRNELSDPKTTMPIISATSA-----------PQ--------------------VTIPTTT 2409
QRN + I S T PQ V P+T
Sbjct: 355 QRNSFDNFGVVRDIRSMTGTGGWLEDTDMAEPQTVNKNQWAENAEPGQRINNGVVCPSTG 414
Query: 2410 LSVSS---------PMTSPLTSKIEKLPEKKSNTTSSLHSLLRDIAVNPSIWMNILKMEH 2562
+SS P+ T + S TT+SL LL+DI VNP++ +NILKM
Sbjct: 415 SVMSSVSCSGNVQVPVMGINTIAGSEQAPVTSTTTASLPDLLKDITVNPTMLINILKMGQ 474
Query: 2563 V---------KSSDDIKSMTQMPNSYSLLGAVPSTIAVPPSSSMLGQMSAGIVQSPSQAV 2715
K +D KS + P+S ++LGA+P AV S + SAG Q PSQ
Sbjct: 475 QQRLALDGQQKLADPAKSTSHPPSSNTVLGAIPEVNAVSSLPSGILPRSAGKAQGPSQIA 534
Query: 2716 STEEPGKVRMKPRDPRRILHNCAPQKGVTTASDQPKINASFSSAMMCSLSTARHED-QLE 2892
+T+E GK+RMKPRDPRR+LHN A Q+ + S+Q K S+ T +++ Q +
Sbjct: 535 TTDESGKIRMKPRDPRRVLHNNALQRAGSLGSEQFKTTTLTSTTQ----GTKDNQNLQKQ 590
Query: 2893 XXXXXXXXXXPPDITMQFTSNLRNIADIMSVSQECMPSSVLPQIPSLQPVQVHQAGMETK 3072
PPDI+ FT +L+NIADI+SVSQ C + Q + QPVQ+ ++ K
Sbjct: 591 EGLAELKPVVPPDISSPFTKSLKNIADIVSVSQTCTTPPFVSQNVASQPVQIKSDRVDGK 650
Query: 3073 GVVADSGNPINGCDLTSEAAIAGPPRPLNANAWSDVEHLFEGFDDKQKAAIQRERARRLE 3252
+++S + A + L+ N W DVEHLFEG+DD+QKAAIQRERARR+E
Sbjct: 651 TGISNSDQKMGPASSPEVVAASS----LSQNTWEDVEHLFEGYDDQQKAAIQRERARRIE 706
Query: 3253 EQKKMFAVRKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLFRFPHMG 3432
EQKK+FA RK NSAKFVEVDP+HDE+LRKKEEQDREKP RHLFRFPHMG
Sbjct: 707 EQKKLFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPYRHLFRFPHMG 766
Query: 3433 MWTKLRPGIWNFLEKASKLFELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEP 3612
MWTKLRPGIWNFLEKASKL+ELHLYTMGNK YATEMAK+LDPKG LF+GRV+SRGDDG+
Sbjct: 767 MWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVVSRGDDGDL 826
Query: 3613 FDGDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPG 3792
DGD+RVPKSKDLEGVLGMES VVIIDDS+RVWPHNKLNLIVVERYIYFPCSRRQFGLPG
Sbjct: 827 LDGDERVPKSKDLEGVLGMESGVVIIDDSLRVWPHNKLNLIVVERYIYFPCSRRQFGLPG 886
Query: 3793 PSLLEIDHDERPEDGTLASSLAVIERIHQNFFAHQSLDEADVRNILASEQRKILAGCRIV 3972
PSLLEIDHDERPEDGTLA SLAVIERIHQNFF H SLDEADVRNILASEQRKILAGCRIV
Sbjct: 887 PSLLEIDHDERPEDGTLACSLAVIERIHQNFFTHHSLDEADVRNILASEQRKILAGCRIV 946
Query: 3973 FSRVFPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTHVVANSLGTDKVNWALSRGKFVV 4152
FSRVFPVGE PH+HPLWQ+AEQFGAVC NQIDE VTHVVANSLGTDKVNWALS G+FVV
Sbjct: 947 FSRVFPVGEVNPHLHPLWQSAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVV 1006
Query: 4153 HPGWVEASALLYRRANELDFAIK 4221
HPGWVEASALLYRRANE DFAIK
Sbjct: 1007 HPGWVEASALLYRRANEQDFAIK 1029
>gb|ESW11309.1| hypothetical protein PHAVU_008G019000g [Phaseolus vulgaris]
Length = 1272
Score = 917 bits (2371), Expect = 0.0
Identities = 587/1291 (45%), Positives = 745/1291 (57%), Gaps = 74/1291 (5%)
Frame = +1
Query: 571 EVHDVEEGEISDSASVEEITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXX 750
EV DVEEGEISD+ASVEEI+E F+ +
Sbjct: 21 EVEDVEEGEISDTASVEEISEADFNKQDVKVNNNNKPNGSD------------------- 61
Query: 751 ARVWTMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXX 927
ARVW++RD+Y KY + SGLYNLAWAQAV NKPL D+FVM D
Sbjct: 62 ARVWSVRDIYTKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMELDSEANANSNSNNSN 121
Query: 928 XXXXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGGDVNEL 1107
++ E + +V + V V++
Sbjct: 122 RPSSVSVNPKEVMVVDVDREEGELEEGEIDADADP-----EAEAESVVAASVVSETVSDS 176
Query: 1108 DERERSKRVNL-----IKEELESLNVADAKKSYDRLCSSLETTAVSLQKMVLEGSFSEKD 1272
++ K V+ +++ LE + VA+ +S+ + S L +L ++ + SEKD
Sbjct: 177 EQFGVKKGVSDSEQLGVRDVLEGVTVANVAESFAQTSSRLLN---ALPQVFSRPADSEKD 233
Query: 1273 TLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPP-LFSSLQLEEVEAIR 1449
L++L AI+ +YS+F SM +EQNK +LRL++ K LFS ++E++ +
Sbjct: 234 DLIRLSFNAIEVVYSVFRSMDSSDKEQNKNSILRLLSSAKDKKQAQLFSPEHIKEIQDMM 293
Query: 1450 SSLQSPADSLSNDNSNGRKQVGTTDLHVLLENTNNDSACLTKCGIESGSAGSLDQTQRNF 1629
+++ S SN+ ++ T ++ ++ N + + GI+ ++ T+
Sbjct: 294 TAIDSVGALGSNEAIYMETELQTPEI----KSQENSALEVQTRGIKIQENQAVVATELVS 349
Query: 1630 SLQYSKSGLVNS-----------KQKGVALPLLDLHKDHDADSLPSPTRDLSTPLPFEHG 1776
S++ S ++ + K +GV LPLLDLHKDHDADSLPSPTR+ + P
Sbjct: 350 SIKPLHSDIIGASRALKFGQNSIKGRGVLLPLLDLHKDHDADSLPSPTREAPSCFPVNKL 409
Query: 1777 LLKPEWPIP-----------RRTLDRENPVMHPYETDAVKAVSSYQQKFGRSSFFMSDNL 1923
L E + + +D E H YETDA+KAVS+YQQKFGRSS F +D L
Sbjct: 410 LSVGEVMVKSGSAAAKMQPGKLEVDSEGSKFHLYETDALKAVSTYQQKFGRSSLFTNDKL 469
Query: 1924 PSPTPSEEGD--TTGDXXXXXXXXXXXXHTGVNTLISGQPMVSSTSPMEALAGPEISDSR 2097
PSPTPS + D T + QP VS+TS ++ IS
Sbjct: 470 PSPTPSGDCDDMAVDTNEEVSSASTSGFLTSTKPTLLDQPPVSATSVDKSRLLGLISSRV 529
Query: 2098 IAVPVSSFGNPVLKSSSAKSRDPRLRLANLDAGARSQSPSFVGSVESKLEYFGMMSTRKP 2277
A SF PV SSAKSRDPR RL N +A A + ++ K+EY G +RK
Sbjct: 530 DAAGSGSF--PV--KSSAKSRDPRRRLINSEASAVDNQFTVTHNM-PKVEYAGSTISRKQ 584
Query: 2278 KTAEERVSDGPALKRQRNELSDPKTTMPIISATS-------------------------- 2379
K EE D KR ++ L + + + +
Sbjct: 585 KAVEEPSFDLTVSKRLKSSLENIEHNTSEVRTIAGSGGWLEDITGPGTQLIEKNHLIDKF 644
Query: 2380 APQVTIPTTTLSVSSPMTSPLTS-KIEKLPEKKSNTTSSLHSLLRDIAVNPSIWMNILKM 2556
AP+ T+S S + TS + E+ P +N SSL ++ +DI VNP++ +++L M
Sbjct: 645 APEPKRTLNTVSSSGSVNFNATSIRNEQAPITSNNVPSSLPAIFKDIVVNPTMLLSLL-M 703
Query: 2557 EHVK-------SSDDIKSMTQMPNSYSLLGAVPSTIAVPPSSSMLGQMSAGIVQSPSQAV 2715
E + S+D +M +S S +G ST ++ S + Q S G++ SQ+
Sbjct: 704 EQKRLVDAQNNSADSATNMLHPTSSNSAMG-TDSTASIVSSMATGLQTSVGMLPVSSQST 762
Query: 2716 STEE-----PGKVRMKPRDPRRILH-NCAPQKGVTTASDQPKINASFSSAMMC---SLST 2868
ST + GK+RMKPRDPRRILH N + QK ++ K S S ++ S++
Sbjct: 763 STAQLQDDYSGKIRMKPRDPRRILHTNNSVQKSGNIVNELHKAIVSPVSNILVTGDSVNA 822
Query: 2869 ARHEDQLEXXXXXXXXXXPPDITMQFTSNLRNIADIMSVSQECMPSSVLPQIPSLQPVQV 3048
+ E +++ PDIT QFT NL+NIADIMSVSQE S Q S V +
Sbjct: 823 QKLEGRMDTKLVPTQSGAAPDITRQFTRNLKNIADIMSVSQESSTHSPAAQGFSSASVPL 882
Query: 3049 HQAGMETKGVVADSGNPINGCDLTSEAAIAGPPRPLNANAWSDVEHLFEGFDDKQKAAIQ 3228
+ E K V+++S N G E G R + + W DVEHLFEG+D++QKAAIQ
Sbjct: 883 NVDRGEQKSVLSNSQNLHAGTGSAPEICAPGTSR--SQSTWGDVEHLFEGYDEQQKAAIQ 940
Query: 3229 RERARRLEEQKKMFAVRKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPQRH 3408
RERARR+EEQ KMFA RK NSAKFVEVDP+H+E+LRKKEE DREKP RH
Sbjct: 941 RERARRIEEQNKMFAARKLCLVLDLDHTLLNSAKFVEVDPVHEEILRKKEELDREKPHRH 1000
Query: 3409 LFRFPHMGMWTKLRPGIWNFLEKASKLFELHLYTMGNKYYATEMAKLLDPKGELFSGRVI 3588
LFRFPHMGMWTKLRPGIWNFLEKASKL+ELHLYTMGNK YATEMAK+LDPKG LF+GRVI
Sbjct: 1001 LFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVI 1060
Query: 3589 SRGDDGEPFDGDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCS 3768
SRGDD + DG++R PKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERY YFPCS
Sbjct: 1061 SRGDDTDSVDGEERAPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCS 1120
Query: 3769 RRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFAHQSLDEADVRNILASEQRK 3948
RRQFGLPGPSLLEIDHDERPE GTLASSLAVIER+HQNFF+ QSL+E DVRNILASEQRK
Sbjct: 1121 RRQFGLPGPSLLEIDHDERPEAGTLASSLAVIERLHQNFFSSQSLEEVDVRNILASEQRK 1180
Query: 3949 ILAGCRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTHVVANSLGTDKVNWA 4128
IL+GCRIVFSRVFPVGEA PH+HPLWQTAEQFGAVC NQID+ VTHVVANSLGTDKVNWA
Sbjct: 1181 ILSGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDDQVTHVVANSLGTDKVNWA 1240
Query: 4129 LSRGKFVVHPGWVEASALLYRRANELDFAIK 4221
LS G+FVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1241 LSTGRFVVHPGWVEASALLYRRANEQDFAIK 1271
>ref|NP_180912.2| RNA polymerase II C-terminal domain phosphatase-like 3 [Arabidopsis
thaliana] gi|238055326|sp|Q8LL04.2|CPL3_ARATH RecName:
Full=RNA polymerase II C-terminal domain phosphatase-like
3; Short=FCP-like 3; AltName: Full=Carboxyl-terminal
phosphatase-like 3; Short=AtCPL3; Short=CTD
phosphatase-like 3 gi|330253756|gb|AEC08850.1| RNA
polymerase II C-terminal domain phosphatase-like 3
[Arabidopsis thaliana]
Length = 1241
Score = 883 bits (2281), Expect = 0.0
Identities = 557/1288 (43%), Positives = 728/1288 (56%), Gaps = 75/1288 (5%)
Frame = +1
Query: 580 DVEEGEISDSASVE-EITEEAFSTKQXXXXXXXXXXXKSXXXXXXXXXXXXXXXXXXXAR 756
DVEEGEI DS + E E+ ++ +T +R
Sbjct: 26 DVEEGEIPDSVNTEIEVKHKSTTTTADVGGDVDVGVVAGGRGGGGGGSNGN-------SR 78
Query: 757 VWTMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXX 933
VWTM +L +Y + SGL NLAWA+AV NKP + VM +
Sbjct: 79 VWTMEELISQYPAYRPYANSGLSNLAWARAVQNKPFNEGLVMDYEPRESDKIVIEDSDDE 138
Query: 934 XXXXXXXXXFVIXXXXXXXXXXXXXXXXXXXXXXXXVVENKDSNVEVKNEVGGDVNELDE 1113
+ V ++ +S V + + D L E
Sbjct: 139 KEEGELEEGEI--------------DLVDNASDDNLVEKDTESVVLISADKVEDDRILKE 184
Query: 1114 RERSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKMVLEGS-FSEKDTLVQLL 1290
R+ K+V LI+ LES ++ +A+ ++ +CS + SL+++V + F ++DTLVQL
Sbjct: 185 RDLEKKVKLIRGVLESTSLVEAQTGFEGVCSRILGALESLRELVSDNDDFPKRDTLVQLS 244
Query: 1291 LTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEVEAIRSSLQSPA 1470
++QT+ +F SM+ I +E+NK + RL+ V S Q E+E + L A
Sbjct: 245 FASLQTINYVFCSMNNISKERNKETMSRLLTLVNDHFSQFLSFNQKNEIETMNQDLSRSA 304
Query: 1471 DSLSNDNSNGRKQVGTTDLHVLLENTNNDSACLTKCGIESGSAGSLDQTQRNFSLQYSKS 1650
++ S+ +++ + + +N DS K ES G+ Y +S
Sbjct: 305 IAVFAGTSSEE------NVNQMTQPSNGDSFLAKKLTSESTHRGAA----------YLRS 348
Query: 1651 GLVNSKQKGVALPLLDLHKDHDADSLPSPTRDLSTPLPFE--HGLLKPEWPIPRRTLDRE 1824
L LPLLDLHKDHDADSLPSPTR+ + LP H +++P +P+ R + E
Sbjct: 349 RLP-------MLPLLDLHKDHDADSLPSPTRETTPSLPVNGRHTMVRPGFPVGRESQTTE 401
Query: 1825 NPVMHPYETDAVKAVSSYQQKFGRSSFFMSDNLPSPTPS-EEGDTTGDXXXXXXXXXXXX 2001
++ YE+DA KAVS+YQQKFG +S F +D+LPSPTPS E D GD
Sbjct: 402 GAKVYSYESDARKAVSTYQQKFGLNSVFKTDDLPSPTPSGEPNDGNGDVGGEVSSSVVKS 461
Query: 2002 HTGVNTLISGQPM----------------VSSTSP-----MEALAGPEISDSRIAVPVSS 2118
+ LI GQ + VSST P + A++ P SD +
Sbjct: 462 SNPGSHLIYGQDVPLPSNFNSRSMPVANSVSSTVPPHHLSIHAISAPTASDQTV------ 515
Query: 2119 FGNPVLKSSSAKSRDPRLRLANLDAGARSQSPSFVGSVE--SKLEYFG-MMSTRKPKTAE 2289
SAKSRDPRLRLA DA + G SK+E +++ RK K A+
Sbjct: 516 -------KPSAKSRDPRLRLAKPDAANVTIYSYSSGDARNLSKVELSADLVNPRKQKAAD 568
Query: 2290 ERVSDGPALKRQRNELSDPKT-----------TMPIISATSAPQVTIPTTTLSVSSPMTS 2436
E + DGPA KRQ+++ PK + ++ S P++ T SS M +
Sbjct: 569 EFLIDGPAWKRQKSDTDAPKAAGTGGWLEDTESSGLLKLESKPRLIENGVTSMTSSVMPT 628
Query: 2437 PLTSKIEKLPEKKSNTTSSLHSLLRDIAVNPSIWMNILKM--------EHVKSSDDIKSM 2592
S +K+ S T+SL SLL+DIAVNP++ +N+LKM + ++ D +
Sbjct: 629 SAVSVSQKV-RTASTDTASLQSLLKDIAVNPTMLLNLLKMGERQKVPEKAIQKPMDPRRA 687
Query: 2593 TQMPNSYSLLGAVPSTIAVPPSSSM-LGQMSAGIVQSPSQAVSTEEPGKVRMKPRDPRRI 2769
Q+P S S+ V + +++P S+++ +++G++Q SQ E G +RMKPRDPRRI
Sbjct: 688 AQLPGS-SVQPGVSTPLSIPASNALAANSLNSGVLQDSSQNAPAAESGSIRMKPRDPRRI 746
Query: 2770 LHNCAPQKGVTTASDQPKINASFSSAMMCSLSTARHEDQLE------------------- 2892
LH Q+ ++ Q K+N + + +L+ + LE
Sbjct: 747 LHGSTLQRTDSSMEKQTKVN---DPSTLGTLTMKGKAEDLETPPQLDPRQNISQNGTSKM 803
Query: 2893 XXXXXXXXXXPPDITMQFTSNLRNIADIMSVSQECMPSSVLPQIPSLQPVQVHQAGMETK 3072
PD + QFT NL++IAD++ VSQ+ P +H ++T+
Sbjct: 804 KISGELLSGKTPDFSTQFTKNLKSIADMVVVSQQL----------GNPPASMHSVQLKTE 853
Query: 3073 GVVADSGNPINGCD------LTSEAAIAGPPRPLNANAWSDVEHLFEGFDDKQKAAIQRE 3234
V + + N D S A AGP R + N+W DVEHLFEG+DD Q+ AIQRE
Sbjct: 854 RDVKHNPSNPNAQDEDVSVSAASVTAAAGPTRSM--NSWGDVEHLFEGYDDIQRVAIQRE 911
Query: 3235 RARRLEEQKKMFAVRKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPQRHLF 3414
R RRLEEQ KMFA +K NSAKF EV+ H+E+LRKKEEQDREKP RHLF
Sbjct: 912 RVRRLEEQNKMFASQKLSLVLDIDHTLLNSAKFNEVESRHEEILRKKEEQDREKPYRHLF 971
Query: 3415 RFPHMGMWTKLRPGIWNFLEKASKLFELHLYTMGNKYYATEMAKLLDPKGELFSGRVISR 3594
RF HMGMWTKLRPGIWNFLEKASKL+ELHLYTMGNK YATEMAKLLDPKG LF+GRVIS+
Sbjct: 972 RFLHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKLLDPKGVLFNGRVISK 1031
Query: 3595 GDDGEPFDGDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRR 3774
GDDG+P DGD+RVPKSKDLEGV+GMES+VVIIDDSVRVWP +K+NLI VERY+YFPCSRR
Sbjct: 1032 GDDGDPLDGDERVPKSKDLEGVMGMESSVVIIDDSVRVWPQHKMNLIAVERYLYFPCSRR 1091
Query: 3775 QFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQNFFAHQSLDEADVRNILASEQRKIL 3954
QFGL GPSLLE+D DE PE+GTLASSLAVIE+IHQNFF+H SLDE DVRNILASEQRKIL
Sbjct: 1092 QFGLLGPSLLELDRDEVPEEGTLASSLAVIEKIHQNFFSHTSLDEVDVRNILASEQRKIL 1151
Query: 3955 AGCRIVFSRVFPVGEAKPHMHPLWQTAEQFGAVCINQIDEHVTHVVANSLGTDKVNWALS 4134
AGCRIVFSR+ PVGEAKPH+HPLWQTAEQFGAVC Q+DEHVTHVV NSLGTDKVNWAL+
Sbjct: 1152 AGCRIVFSRIIPVGEAKPHLHPLWQTAEQFGAVCTTQVDEHVTHVVTNSLGTDKVNWALT 1211
Query: 4135 RGKFVVHPGWVEASALLYRRANELDFAI 4218
RG+FVVHPGWVEASA LY+RANE +AI
Sbjct: 1212 RGRFVVHPGWVEASAFLYQRANENLYAI 1239