BLASTX nr result
ID: Rehmannia22_contig00010061
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00010061
(889 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,... 278 2e-72
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,... 270 7e-70
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ... 252 1e-64
gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe... 243 5e-62
gb|EMJ20208.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe... 243 5e-62
gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao] gi|508... 240 6e-61
ref|XP_002333134.1| predicted protein [Populus trichocarpa] 234 3e-59
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro... 231 2e-58
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,... 230 5e-58
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [... 230 5e-58
ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,... 229 8e-58
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,... 225 2e-56
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis] 224 4e-56
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,... 223 7e-56
ref|XP_002331841.1| predicted protein [Populus trichocarpa] 222 2e-55
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,... 219 8e-55
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr... 212 1e-52
ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago t... 211 2e-52
ref|XP_006394670.1| hypothetical protein EUTSA_v10004166mg [Eutr... 211 3e-52
dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila] 211 3e-52
>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Solanum tuberosum]
Length = 516
Score = 278 bits (711), Expect = 2e-72
Identities = 152/251 (60%), Positives = 185/251 (73%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARYSTRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEAN 574
MGVVTVSSSA R+PLGL++R+STR+ L+R VI+SFK DK+KN LIAP ESI+L +E +
Sbjct: 1 MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETS 60
Query: 573 KETEKRLGXXXXXXXXXXXVSTIEASPSTLDLDYNEAATKLEYIYKRSPATAVSVDEVKD 394
KE EKR IEASPSTL+LDY+EAA KLE IYKRS TA S EV+D
Sbjct: 61 KENEKR-SRRVSKRSERVHAVAIEASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQD 119
Query: 393 QRVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSLEKRIALRTKKESEYPASSQ 214
VKRR +K E E A+K+ ADNVV+N RK RL+L++RIAL KE E ASS+
Sbjct: 120 HLVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSE 179
Query: 213 QRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQ 34
+RK K + +DEK D+LVR YS ++DL S DW+KMK+PPVLPSSEH WLFKLMQPMKAILQ
Sbjct: 180 RRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAILQ 239
Query: 33 VKASIENDLGR 1
VK +++NDLGR
Sbjct: 240 VKENLQNDLGR 250
>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform 1 [Solanum
lycopersicum]
Length = 516
Score = 270 bits (689), Expect = 7e-70
Identities = 146/251 (58%), Positives = 181/251 (72%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARYSTRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEAN 574
MGVVTVSSSA R+PLGL++R+S R+ L+R VI+SFK D +KN L++P ESI+ P+E +
Sbjct: 1 MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60
Query: 573 KETEKRLGXXXXXXXXXXXVSTIEASPSTLDLDYNEAATKLEYIYKRSPATAVSVDEVKD 394
KE EKR TIEA PSTL+LDY+EAA KLE IYKRS TA EVKD
Sbjct: 61 KENEKR-SRRVSKRTERVHAVTIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119
Query: 393 QRVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSLEKRIALRTKKESEYPASSQ 214
VKRR +K E E A+K+ DNVV+N RKK RL+L++RIAL KE + ASS+
Sbjct: 120 HLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSE 179
Query: 213 QRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQ 34
+RK + +DEK D+LVR YS ++DL S DW+KMK+PPVLPSSEH WLFKLMQPMKAILQ
Sbjct: 180 RRKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQ 239
Query: 33 VKASIENDLGR 1
VK +++NDLGR
Sbjct: 240 VKENLQNDLGR 250
>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|302143685|emb|CBI22546.3| unnamed protein product
[Vitis vinifera]
Length = 518
Score = 252 bits (644), Expect = 1e-64
Identities = 141/253 (55%), Positives = 178/253 (70%), Gaps = 2/253 (0%)
Frame = -2
Query: 753 MGVVTVSSSAG--RTPLGLNARYSTRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLE 580
MGVVTVSSSA RTP GLNA++S + LRR ++L+FK DK+KNIAL+ P E I LP+E
Sbjct: 1 MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60
Query: 579 ANKETEKRLGXXXXXXXXXXXVSTIEASPSTLDLDYNEAATKLEYIYKRSPATAVSVDEV 400
+K+ +KRL VST E SP +++LDYNEAA KLE IYK SPAT VS E
Sbjct: 61 TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAED 120
Query: 399 KDQRVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSLEKRIALRTKKESEYPAS 220
++ V+R + R+K + AEK+ +DNVVR KK RLSLEKRIAL K+ + AS
Sbjct: 121 LERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVAS 180
Query: 219 SQQRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAI 40
Q+++ N +DE D LVR YSAS+DLVS DW+KMK+PPVLP SEHAWLFKLMQPMK +
Sbjct: 181 IQKKRDSKN-EDENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGL 239
Query: 39 LQVKASIENDLGR 1
L+VK +++ DLGR
Sbjct: 240 LEVKDNLQKDLGR 252
>gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
Length = 519
Score = 243 bits (621), Expect = 5e-62
Identities = 129/253 (50%), Positives = 177/253 (69%), Gaps = 2/253 (0%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARYSTRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEAN 574
MGVVTVSSSA RTPLGL+ + + + S LR+ +I++FKTD++ AL+AP E I LP+E
Sbjct: 1 MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60
Query: 573 KETEKRLGXXXXXXXXXXXVSTIEASPSTLDLDYNEAATKLEYIYKRSPATAVSVD-EVK 397
K+ +KRLG +T ASP TL++DYNEAA KLE +YKRSP T + D E
Sbjct: 61 KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 120
Query: 396 DQRVKRRQPRKKSTGE-EAEVAEKKTADNVVRNMRKKEIRLSLEKRIALRTKKESEYPAS 220
D ++R + R+K T E +A+ E +T++ VVRN KK RLSL KR+AL+ K+ + +S
Sbjct: 121 DGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISS 180
Query: 219 SQQRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAI 40
++++ ++EK + LVR YS S+DLVS DW+KMK+PPVL SSEHAWLFKLMQPMK +
Sbjct: 181 IVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGL 240
Query: 39 LQVKASIENDLGR 1
L+VK +++ DLGR
Sbjct: 241 LEVKENLQKDLGR 253
>gb|EMJ20208.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
Length = 390
Score = 243 bits (621), Expect = 5e-62
Identities = 129/253 (50%), Positives = 177/253 (69%), Gaps = 2/253 (0%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARYSTRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEAN 574
MGVVTVSSSA RTPLGL+ + + + S LR+ +I++FKTD++ AL+AP E I LP+E
Sbjct: 1 MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60
Query: 573 KETEKRLGXXXXXXXXXXXVSTIEASPSTLDLDYNEAATKLEYIYKRSPATAVSVD-EVK 397
K+ +KRLG +T ASP TL++DYNEAA KLE +YKRSP T + D E
Sbjct: 61 KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 120
Query: 396 DQRVKRRQPRKKSTGE-EAEVAEKKTADNVVRNMRKKEIRLSLEKRIALRTKKESEYPAS 220
D ++R + R+K T E +A+ E +T++ VVRN KK RLSL KR+AL+ K+ + +S
Sbjct: 121 DGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISS 180
Query: 219 SQQRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAI 40
++++ ++EK + LVR YS S+DLVS DW+KMK+PPVL SSEHAWLFKLMQPMK +
Sbjct: 181 IVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGL 240
Query: 39 LQVKASIENDLGR 1
L+VK +++ DLGR
Sbjct: 241 LEVKENLQKDLGR 253
>gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao]
gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
[Theobroma cacao]
Length = 516
Score = 240 bits (612), Expect = 6e-61
Identities = 133/251 (52%), Positives = 165/251 (65%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARYSTRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEAN 574
MGVV+VSSSA RTPLGL+ ++ST+ RR + ++FK DKS N AL+ P E I LP+E
Sbjct: 1 MGVVSVSSSAARTPLGLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETA 60
Query: 573 KETEKRLGXXXXXXXXXXXVSTIEASPSTLDLDYNEAATKLEYIYKRSPATAVSVDEVKD 394
KE KR G V T + SP TL++DYNEAA KLE IYK SPAT S E +
Sbjct: 61 KEHPKRRGKAKKDPKIVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVE 120
Query: 393 QRVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSLEKRIALRTKKESEYPASSQ 214
++K R+ R+K + E E VVRN + RLSL+ RIAL+ +E E P S
Sbjct: 121 GKIKGRRQRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNRE-EKPVVSV 179
Query: 213 QRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQ 34
+RK+ + EK DRLVR YSAS+DLVS DWRKMK+PPVLPS EH WLFKLMQPMKA+LQ
Sbjct: 180 RRKKSSENESEKIDRLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQ 239
Query: 33 VKASIENDLGR 1
K +++ DLGR
Sbjct: 240 AKENLQKDLGR 250
>ref|XP_002333134.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 234 bits (597), Expect = 3e-59
Identities = 134/250 (53%), Positives = 169/250 (67%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARYSTRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEAN 574
MGVV+VSSSA RTPLGL+ ++ST S +R +I++FK DKS N +L+AP E I LP+E
Sbjct: 1 MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETT 60
Query: 573 KETEKRLGXXXXXXXXXXXVSTIEASPSTLDLDYNEAATKLEYIYKRSPATAVSVDEVKD 394
K +KRLG V T E SP TL +DYNEAA KLE IYK SP T S E
Sbjct: 61 KG-KKRLGKSKKSSNRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDAS 118
Query: 393 QRVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSLEKRIALRTKKESEYPASSQ 214
++R + RK+ E + E +T +VRN KK RLSLEKRI+LR K E + +S+
Sbjct: 119 GVIRRGRQRKRKISEGGKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAG 178
Query: 213 QRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQ 34
+RK + N ++EK D LVR YSAS+DLVS DW+KMK+PPVL SSEH WLFKLMQPMKA+LQ
Sbjct: 179 KRKDRKN-ENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQ 237
Query: 33 VKASIENDLG 4
VK ++ +LG
Sbjct: 238 VKEHLQENLG 247
>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
sigma subunit SigE family protein [Populus trichocarpa]
Length = 512
Score = 231 bits (590), Expect = 2e-58
Identities = 133/250 (53%), Positives = 169/250 (67%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARYSTRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEAN 574
MGVV+VSSSA RTPLGL+ ++ST S +R +I++FK +KS N +L+AP E I LP+E
Sbjct: 1 MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETT 60
Query: 573 KETEKRLGXXXXXXXXXXXVSTIEASPSTLDLDYNEAATKLEYIYKRSPATAVSVDEVKD 394
K +KRLG V T E SP TL +DYNEAA KLE IYK SP T S E
Sbjct: 61 KG-KKRLGKSKKSSNRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDAS 118
Query: 393 QRVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSLEKRIALRTKKESEYPASSQ 214
++R + RK+ E + E +T +VRN KK RLSLEKRI+LR K E + +S+
Sbjct: 119 GVIRRGRQRKRKISEGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAG 178
Query: 213 QRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQ 34
+RK + N ++EK D LVR YSAS+DLVS DW+KMK+PPVL SSEH WLFKLMQPMKA+LQ
Sbjct: 179 KRKDRKN-ENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQ 237
Query: 33 VKASIENDLG 4
VK ++ +LG
Sbjct: 238 VKEHLQENLG 247
>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 520
Score = 230 bits (587), Expect = 5e-58
Identities = 126/254 (49%), Positives = 171/254 (67%), Gaps = 3/254 (1%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARY-STRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEA 577
MGVVTVSSS RTPLGL+ S++ S LR+ +I++F+TDKS AL+AP E + LP+E
Sbjct: 1 MGVVTVSSSVSRTPLGLSTNLVSSQRSTLRKPLIVAFRTDKSDKKALVAPQEKVPLPIET 60
Query: 576 NKETEKRLGXXXXXXXXXXXVSTIEASPSTLDLDYNEAATKLEYIYKRSPATAVS-VDEV 400
K+ +KRLG EA L+LDYNEAA KLE +YKRSP T S V+ V
Sbjct: 61 GKKVQKRLGKARKLPKSVKAALIEEAPTCDLELDYNEAAAKLENLYKRSPETEASDVENV 120
Query: 399 KDQRVKRRQPRKKSTGEEAEVAEKKTADN-VVRNMRKKEIRLSLEKRIALRTKKESEYPA 223
+KR + R+K E + EK+T+D+ VVR++ KK RLSL+KR+AL+ K+ + A
Sbjct: 121 DGLMIKRGRKRRKKISEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVAA 180
Query: 222 SSQQRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKA 43
S ++++ ++E + LVR YSAS+DLVS DW+KM++PPVL SSEH WLFKLMQPMK
Sbjct: 181 SVVRKRKDKRSENEMMEELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMKG 240
Query: 42 ILQVKASIENDLGR 1
+L+VK ++ DLGR
Sbjct: 241 LLEVKEILQKDLGR 254
>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 501
Score = 230 bits (587), Expect = 5e-58
Identities = 128/251 (50%), Positives = 170/251 (67%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARYSTRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEAN 574
MGVVT SSSA RTPLGL+ ++ST S ++RS++++FK DK+ +I L+ P E LP+E +
Sbjct: 1 MGVVTASSSAARTPLGLSLKFSTYRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIETS 60
Query: 573 KETEKRLGXXXXXXXXXXXVSTIEASPSTLDLDYNEAATKLEYIYKRSPATAVSVDEVKD 394
K ++R + E S TL++DYNEAA KLE IYK SPAT S ++
Sbjct: 61 KGKKRR------------GKTNREVSSGTLEVDYNEAAAKLENIYKLSPATDTSDVDING 108
Query: 393 QRVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSLEKRIALRTKKESEYPASSQ 214
K RQ RK+ TGE E AE +T+ +VRN KK RLSL+KRIAL+ +E E +
Sbjct: 109 LIRKGRQ-RKRKTGEGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIR 167
Query: 213 QRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQ 34
++K + D+EK + LVR YSAS++LVS DWRKMK+PPVLPS+EHAWLFKLMQPMK +L
Sbjct: 168 KKKDSKD-DNEKIEELVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLP 226
Query: 33 VKASIENDLGR 1
VKA ++ +LGR
Sbjct: 227 VKADLQKNLGR 237
>ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform 2 [Solanum
lycopersicum]
Length = 487
Score = 229 bits (585), Expect = 8e-58
Identities = 132/251 (52%), Positives = 161/251 (64%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARYSTRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEAN 574
MGVVTVSSSA R+PLGL++R+S R+ L+R VI+SFK D +KN L++P ESI+ P+E +
Sbjct: 1 MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60
Query: 573 KETEKRLGXXXXXXXXXXXVSTIEASPSTLDLDYNEAATKLEYIYKRSPATAVSVDEVKD 394
KE EKR TIEA PSTL+LDY+EAA KLE IYKRS TA EVKD
Sbjct: 61 KENEKR-SRRVSKRTERVHAVTIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119
Query: 393 QRVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSLEKRIALRTKKESEYPASSQ 214
VKRR +K E E A+K+ DNVV+N RKK RL+L++RIAL KE
Sbjct: 120 HLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEG------- 172
Query: 213 QRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQ 34
++DL S DW+KMK+PPVLPSSEH WLFKLMQPMKAILQ
Sbjct: 173 ----------------------ATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQ 210
Query: 33 VKASIENDLGR 1
VK +++NDLGR
Sbjct: 211 VKENLQNDLGR 221
>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X1 [Glycine
max] gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X2 [Glycine
max]
Length = 512
Score = 225 bits (573), Expect = 2e-56
Identities = 124/246 (50%), Positives = 159/246 (64%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARYSTRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEAN 574
MGV+TVS+SA RTPL LN R + + +R +IL+FK +KS L++P E I LPLE
Sbjct: 1 MGVITVSTSAARTPLRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETA 60
Query: 573 KETEKRLGXXXXXXXXXXXVSTIEASPSTLDLDYNEAATKLEYIYKRSPATAVSVDEVKD 394
K+ +KR+G VST+E SP TLD+DYNEAA KLE IYK SP + E D
Sbjct: 61 KKHQKRVGKTSESLKRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDID 120
Query: 393 QRVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSLEKRIALRTKKESEYPASSQ 214
+++R R+K EE + DNVVRN KK RLSL+KRIAL+ + E
Sbjct: 121 SKIERVLRRRKKVSEE---RDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEV-IDQT 176
Query: 213 QRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQ 34
Q+K+ + + D L+R YSAS+DLVS DW+KMK+PPVLPSSEHAWLFKLMQPMKA+LQ
Sbjct: 177 QKKRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQ 236
Query: 33 VKASIE 16
K ++
Sbjct: 237 AKEDLK 242
>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 517
Score = 224 bits (570), Expect = 4e-56
Identities = 125/254 (49%), Positives = 169/254 (66%), Gaps = 3/254 (1%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARYST-RVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEA 577
MGVVTVSSSA RTPLGL+ ++S+ R S+L++ +I++FK DKS L+AP + I LP+E
Sbjct: 1 MGVVTVSSSASRTPLGLSLKFSSNRSSVLKKPLIVAFKGDKSNKTVLVAPQDQIILPVET 60
Query: 576 NKETEKRLGXXXXXXXXXXXVSTIEASPSTLDLDYNEAATKLEYIYKRSPATAVSVDEVK 397
KE + R+G V+T EAS ST+++DYNEAA KLE I+K S A V++
Sbjct: 61 RKEVKSRVGKAKKSSNRVKAVATDEASTSTMEVDYNEAAAKLENIFKLSSA---DVEDAV 117
Query: 396 DQRVKRRQPRKKSTGEEAEVAEKK--TADNVVRNMRKKEIRLSLEKRIALRTKKESEYPA 223
+ R+ R K GE E A KK T+D VVRN +KK RLSL KR+ L+ KE
Sbjct: 118 GLTSRGRRRRSKVIGESDERAGKKSTTSDTVVRNRKKKAKRLSLHKRVELKRDKEENVAV 177
Query: 222 SSQQRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKA 43
+++++ ++EK ++LVR YSAS+DLVS DW+KMK+PPVLPSSEH WLFKLMQP+K
Sbjct: 178 VLVRKRRESLNEEEKIEKLVREYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPLKQ 237
Query: 42 ILQVKASIENDLGR 1
+ QV ++ LGR
Sbjct: 238 LFQVGEDLQKTLGR 251
>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 514
Score = 223 bits (568), Expect = 7e-56
Identities = 125/255 (49%), Positives = 162/255 (63%), Gaps = 4/255 (1%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARYSTRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEAN 574
MGVVTVSS+A RTP L ++S S L+R I++FK DK N L++P E + LP+E+N
Sbjct: 1 MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60
Query: 573 KETEKRLGXXXXXXXXXXXVSTIEASPSTLDLDYNEAATKLEYIYKRSPATAVSVDEVKD 394
+KR G V EA+P +LDLDYNEAA KLE I+K SP T S E KD
Sbjct: 61 NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120
Query: 393 QRVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSLEKRIALRTKKESEYPASSQ 214
R KR Q R K + + D +VRN K+ RL L+KRIAL+ KKE + A +
Sbjct: 121 GRSKRGQKRSKKSAN-------RPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLR 173
Query: 213 QRKQKMNG----DDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMK 46
++K N DD++ DRLVR YSAS+DLVS DW+KMK+PPVLPSSEH LFKL+QPMK
Sbjct: 174 KQKDTKNEADEIDDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMK 233
Query: 45 AILQVKASIENDLGR 1
A+++V+ ++ LGR
Sbjct: 234 ALVEVQEELQKGLGR 248
>ref|XP_002331841.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 222 bits (565), Expect = 2e-55
Identities = 128/251 (50%), Positives = 166/251 (66%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARYSTRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEAN 574
MG+V+VSSSA TPLG + ++ST S +R +I++FK DKS AL+AP E I LP+E
Sbjct: 1 MGIVSVSSSASWTPLGFSTKFSTCRSTAKRPLIVAFKADKSNETALVAPHEQIPLPIETT 60
Query: 573 KETEKRLGXXXXXXXXXXXVSTIEASPSTLDLDYNEAATKLEYIYKRSPATAVSVDEVKD 394
KE +KR G V T E SP TL +DYNEAA KLE IYK SP T S E +
Sbjct: 61 KE-KKRRGKSKKSSDRLKAVRT-EVSPCTLGVDYNEAAAKLENIYKLSPGTDTSDVEDVN 118
Query: 393 QRVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSLEKRIALRTKKESEYPASSQ 214
++R + RK+ T E + + +T+ +VRN KK RLSL+KRIALR K + + S
Sbjct: 119 GVIRRCRQRKRKTSECEKEDDGRTSKIIVRNQAKKAKRLSLQKRIALRIKSDEKLVTSVG 178
Query: 213 QRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQ 34
+RK + N ++EK D LVR YS+S+DL S DW+KMK+PPVL S+EHAWLFKLMQPMKA LQ
Sbjct: 179 KRKGRKN-ENEKIDELVREYSSSTDLASLDWKKMKIPPVLTSAEHAWLFKLMQPMKASLQ 237
Query: 33 VKASIENDLGR 1
VK ++ + GR
Sbjct: 238 VKEHLQENSGR 248
>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 515
Score = 219 bits (559), Expect = 8e-55
Identities = 126/257 (49%), Positives = 162/257 (63%), Gaps = 6/257 (2%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARYSTRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEAN 574
MGVVTVSS+A RTP L ++S S L+R I++FK DK N L++P E + LP+E+N
Sbjct: 1 MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60
Query: 573 KETEKRLGXXXXXXXXXXXVSTIEASPSTLDLDYNEAATKLEYIYKRSPATAVSVDEVKD 394
+KR G V EA+P +LDLDYNEAA KLE I+K SP T S E KD
Sbjct: 61 NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120
Query: 393 QRVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSLEKRIALRTK------KESE 232
R KR Q R K + + D +VRN K+ RL L+KRIAL+ K KE +
Sbjct: 121 GRSKRGQKRSKKSAN-------RPGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGK 173
Query: 231 YPASSQQRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQP 52
S +++K+ N DDE DRLVR YSAS+DLVS DW+KMK+PPVLPSSEH LFKL+QP
Sbjct: 174 AVPSLRKQKETKNEDDE-IDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQP 232
Query: 51 MKAILQVKASIENDLGR 1
MKA+++V+ ++ LGR
Sbjct: 233 MKALVEVQEELQKGLGR 249
>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
gi|567858878|ref|XP_006422122.1| hypothetical protein
CICLE_v10004760mg [Citrus clementina]
gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X1 [Citrus
sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED:
RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X2 [Citrus
sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED:
RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X3 [Citrus
sinensis] gi|557523994|gb|ESR35361.1| hypothetical
protein CICLE_v10004760mg [Citrus clementina]
gi|557523995|gb|ESR35362.1| hypothetical protein
CICLE_v10004760mg [Citrus clementina]
Length = 513
Score = 212 bits (540), Expect = 1e-52
Identities = 122/251 (48%), Positives = 158/251 (62%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARYSTRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEAN 574
MGVVT+SSS R+P+GL+ + S +R +I++FK DKS N AL +P E I LP+E
Sbjct: 1 MGVVTISSSPARSPIGLST--ISHRSTSKRPLIVAFKADKSNNQALFSPQEQIPLPIETP 58
Query: 573 KETEKRLGXXXXXXXXXXXVSTIEASPSTLDLDYNEAATKLEYIYKRSPATAVSVDEVKD 394
K +KR V + EASP TLD+DYNEAA KLE IYK SPA S + D
Sbjct: 59 KRHQKRRENSRKRLERVKGVFSDEASPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYAD 118
Query: 393 QRVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSLEKRIALRTKKESEYPASSQ 214
VKR + R+K GE + ++ + VVRN K+ RLSL+KRI LR K + ++
Sbjct: 119 GVVKRGRQRRKRIGEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELR--KNEDEKVVTK 176
Query: 213 QRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQ 34
RK + EK ++LVR YS S+DLVS DW+KMK+PPVL S+EH WLFKLMQPMK +Q
Sbjct: 177 TRKTDSKDEHEKIEKLVREYSYSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQ 236
Query: 33 VKASIENDLGR 1
VK ++ DLGR
Sbjct: 237 VKEQLQKDLGR 247
>ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
gi|355491246|gb|AES72449.1| RNA polymerase sigma factor
rpoD [Medicago truncatula]
Length = 514
Score = 211 bits (538), Expect = 2e-52
Identities = 119/251 (47%), Positives = 163/251 (64%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARYSTRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEAN 574
MGVVTVSSSA RTPLGLNA++ST +L+R + ++FK DK + AL+A E I ++
Sbjct: 1 MGVVTVSSSAARTPLGLNAKFSTHHPVLKRPLTVAFKGDKQNDTALVATQEKIPTQVKPA 60
Query: 573 KETEKRLGXXXXXXXXXXXVSTIEASPSTLDLDYNEAATKLEYIYKRSPATAVSVDEVKD 394
K +KR+ V T E PS+LD+DYNEAA LE IYK SP T + + +
Sbjct: 61 KTHKKRIAKTNKLPKKPRAVCTEETFPSSLDVDYNEAAAILENIYKLSPTTDICDADYIE 120
Query: 393 QRVKRRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSLEKRIALRTKKESEYPASSQ 214
+++KR R K G+ ++ E +D VVRN + K R++L++RIAL+T + SE
Sbjct: 121 RKIKRVSRRGKKIGDVSK--EDSNSDRVVRNQKTKAKRMNLDERIALKTSENSE-DVIPT 177
Query: 213 QRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPMKAILQ 34
++K+ EK D L+R YS +DLVS DW+KMK+PPVLPSSEHA+LFKLMQPMKA+LQ
Sbjct: 178 RKKRNPRSRVEKIDELLREYSVPADLVSLDWKKMKIPPVLPSSEHAFLFKLMQPMKALLQ 237
Query: 33 VKASIENDLGR 1
VK ++ +L R
Sbjct: 238 VKDDLQKELER 248
>ref|XP_006394670.1| hypothetical protein EUTSA_v10004166mg [Eutrema salsugineum]
gi|557091309|gb|ESQ31956.1| hypothetical protein
EUTSA_v10004166mg [Eutrema salsugineum]
Length = 463
Score = 211 bits (537), Expect = 3e-52
Identities = 128/256 (50%), Positives = 167/256 (65%), Gaps = 5/256 (1%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARYSTRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEAN 574
MGVV +SSSA R+PLGL++ T S L++ I++FK D S N ALI P E I +P E
Sbjct: 1 MGVVYISSSAARSPLGLSSDLLTHRSSLKKPSIVAFKADDSTNSALIIPSEQILIPAE-- 58
Query: 573 KETEKRLGXXXXXXXXXXXVSTIE---ASPSTLDLDYNEAATKLEYIYKRSPATAVSVDE 403
K+ EKR+ S+++ A +L +DYNEAA +LE IYK SPAT+V D+
Sbjct: 59 KQKEKRVVTKRKPCKTPKKPSSLDHNLAPSCSLGVDYNEAAARLESIYKLSPATSVE-DD 117
Query: 402 VKDQRVK-RRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSLEKRIAL-RTKKESEY 229
+ +VK R+ R+K GEE +V VVRN KE RLSL+KRIAL R +E
Sbjct: 118 IDGSKVKVSRRRRRKEGGEEKKV--------VVRNNGMKEKRLSLDKRIALKRNIQEKPL 169
Query: 228 PASSQQRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPM 49
S+Q++ K ++EK +RLVR YSAS D+VS DW+KMK+PPVLPS+EHAWLFKLMQPM
Sbjct: 170 VPSAQKKVTKKQQEEEKIERLVRDYSASHDIVSLDWKKMKIPPVLPSTEHAWLFKLMQPM 229
Query: 48 KAILQVKASIENDLGR 1
KA+LQVK ++ LGR
Sbjct: 230 KALLQVKDELQKSLGR 245
>dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]
Length = 511
Score = 211 bits (537), Expect = 3e-52
Identities = 128/256 (50%), Positives = 167/256 (65%), Gaps = 5/256 (1%)
Frame = -2
Query: 753 MGVVTVSSSAGRTPLGLNARYSTRVSLLRRSVILSFKTDKSKNIALIAPGESIALPLEAN 574
MGVV +SSSA R+PLGL++ T S L++ I++FK D S N ALI P E I +P E
Sbjct: 1 MGVVFISSSAARSPLGLSSDLLTHRSSLKKPSIVAFKADDSTNSALIIPSEQILIPAE-- 58
Query: 573 KETEKRLGXXXXXXXXXXXVSTIE---ASPSTLDLDYNEAATKLEYIYKRSPATAVSVDE 403
K+ EKR+ S+++ A +L +DYNEAA +LE IYK SPAT+V D+
Sbjct: 59 KQKEKRVVTKRKPCKTPKKPSSLDHNLAPSCSLGVDYNEAAARLESIYKLSPATSVE-DD 117
Query: 402 VKDQRVK-RRQPRKKSTGEEAEVAEKKTADNVVRNMRKKEIRLSLEKRIAL-RTKKESEY 229
+ +VK R+ R+K GEE +V VVRN KE RLSL+KRIAL R +E
Sbjct: 118 IDGSKVKVSRRRRRKEGGEEKKV--------VVRNNGMKEKRLSLDKRIALKRNIQEKPL 169
Query: 228 PASSQQRKQKMNGDDEKTDRLVRGYSASSDLVSFDWRKMKMPPVLPSSEHAWLFKLMQPM 49
S+Q++ K ++EK +RLVR YSAS D+VS DW+KMK+PPVLPS+EHAWLFKLMQPM
Sbjct: 170 VPSAQKKVTKKQQEEEKIERLVRDYSASHDIVSLDWKKMKIPPVLPSTEHAWLFKLMQPM 229
Query: 48 KAILQVKASIENDLGR 1
KA+LQVK ++ LGR
Sbjct: 230 KALLQVKDELQKSLGR 245