BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00009928
         (2937 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras...  1420   0.0  
ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1411   0.0  
ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1407   0.0  
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras...  1404   0.0  
gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]      1401   0.0  
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1354   0.0  
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [...  1334   0.0  
gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus pe...  1333   0.0  
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu...  1328   0.0  
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1327   0.0  
gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1...  1321   0.0  
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1316   0.0  
emb|CBI36559.3| unnamed protein product [Vitis vinifera]             1308   0.0  
gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2...  1303   0.0  
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr...  1303   0.0  
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1299   0.0  
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1296   0.0  
emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]     1268   0.0  
ref|XP_006453567.1| hypothetical protein CICLE_v10007333mg [Citr...  1247   0.0  
ref|XP_006404912.1| hypothetical protein EUTSA_v10000030mg [Eutr...  1246   0.0  

>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName:
            Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 3; Flags: Precursor
            gi|59800203|sp|P69243.1|RPO3A_TOBAC RecName:
            Full=DNA-directed RNA polymerase 3A, chloroplastic;
            AltName: Full=NictaRpoT3-syl; AltName: Full=T7
            bacteriophage-type single subunit RNA polymerase 3A;
            Flags: Precursor gi|21425641|emb|CAC82576.3| phage-type
            RNA polymerase [Nicotiana sylvestris]
            gi|21425679|emb|CAC95027.2| plastid RNA polymerase
            [Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 977

 Score = 1420 bits (3676), Expect = 0.0
 Identities = 693/865 (80%), Positives = 782/865 (90%), Gaps = 1/865 (0%)
 Frame = -1

Query: 2937 PWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYY-LLRRRQIKAETEAWXXXXXXXXXXX 2761
            PW+SSLFM SL  R +   GV+ EF+E+ERR+ Y +LRRRQIKAETEAW           
Sbjct: 107  PWVSSLFMNSLFVRAKQVQGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRELE 166

Query: 2760 XXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAV 2581
                 +KLAPNLP+VKKL+LGWFEPLR+AIEKEQN + + K++AAFAP++D+LPADKMAV
Sbjct: 167  REMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPADKMAV 226

Query: 2580 IVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQE 2401
            IVMHK+MGLLMMGGKE+RCV+VV+AAVQIG+A+E+EVRIH+FLE+TKK Q+   GA+SQE
Sbjct: 227  IVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTKKLQKHMTGAQSQE 286

Query: 2400 DSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQ 2221
            D  +E  ILRKRVKSLIKRNRV+EV+KL++SEE +SWGRDTQAKLGC L++LLT++AYVQ
Sbjct: 287  DMSRETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGCRLLELLTETAYVQ 346

Query: 2220 PPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPY 2041
            PPV+QSAD+PPD+RPAFRH+F+IATR+ G+S+VKKYGVIECDPLV+AG+D+TVK M+IPY
Sbjct: 347  PPVDQSADTPPDIRPAFRHVFRIATRDPGKSIVKKYGVIECDPLVVAGVDRTVKQMMIPY 406

Query: 2040 VPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTK 1861
            VPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSR+QQDAV++VPTKQMQ+VYEALDTLG+TK
Sbjct: 407  VPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPTKQMQQVYEALDTLGSTK 466

Query: 1860 WRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXXXXXXXXXKINQER 1681
            WRVNKRILSVVESIWA GGN+AGLV+R+DVPIPEL SDD               KINQE 
Sbjct: 467  WRVNKRILSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMEVKKWKWRVRKSKKINQEL 526

Query: 1680 HSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGR 1501
            HSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGR
Sbjct: 527  HSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGR 586

Query: 1500 PLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAED 1321
            PLGKSGLRWLKIHLA+LY GG+EKL YD R++FVEN+I +I DSA+N LNGNRWWL AED
Sbjct: 587  PLGKSGLRWLKIHLASLYAGGIEKLCYDARLAFVENHIDDILDSANNPLNGNRWWLNAED 646

Query: 1320 PFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGD 1141
            PFQCLAACINLSEAL+SSSPHTV SHLPIHQDGSCNGLQHYAALGRDS EAAAVNL+AGD
Sbjct: 647  PFQCLAACINLSEALKSSSPHTVFSHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLVAGD 706

Query: 1140 KPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYV 961
            KPADVY+EIA RV +I++ DS KDPATDP+ALLAKLLI QVDRKLVKQTVMTSVYGVTYV
Sbjct: 707  KPADVYTEIALRVDHIIRGDSIKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYV 766

Query: 960  GAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIAS 781
            GAREQIKRRLEEKGLI DDRLLF+A+CYAAKVTLAALGELFQAAR  M WLGDCAK+IAS
Sbjct: 767  GAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAKVIAS 826

Query: 780  ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSL 601
            ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGD+VEVRKQRTAFPPNFVHSL
Sbjct: 827  ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDTVEVRKQRTAFPPNFVHSL 886

Query: 600  DGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLESF 421
            DGSHMMMTA+ACRDAGL+FAGVHDSFWTHACDVD+MN+ILR+KFV+LY+MPILE LLESF
Sbjct: 887  DGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLLESF 946

Query: 420  ETSYPTLTFPALPNRGDFDLNKVVQ 346
            + SYP LTFP LP RGDFDL +V++
Sbjct: 947  QNSYPALTFPPLPKRGDFDLVEVLE 971


>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
            tuberosum]
          Length = 1015

 Score = 1411 bits (3653), Expect = 0.0
 Identities = 684/865 (79%), Positives = 777/865 (89%), Gaps = 1/865 (0%)
 Frame = -1

Query: 2937 PWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYY-LLRRRQIKAETEAWXXXXXXXXXXX 2761
            PW+SSLFM SL  R +   GV+ EF+E+ERR+ Y +LRRRQIKAETEAW           
Sbjct: 145  PWVSSLFMNSLFVRAKQVKGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRELE 204

Query: 2760 XXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAV 2581
                 +KLAPNLP+VKKL+LGWFEPLR+AIEKEQN + ++K++ A+AP++D+LPADKMAV
Sbjct: 205  REMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAEMTQKHRTAYAPHIDSLPADKMAV 264

Query: 2580 IVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQE 2401
            IVMHK+MGLLMMGGKE+RCV+VV+AAVQIG+A+E+EVRIH+F+E+TKKHQ+   GA+ QE
Sbjct: 265  IVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFMEKTKKHQKHMSGAQGQE 324

Query: 2400 DSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQ 2221
            D  +E  ILRKRVKSLIKRNRV+EV+KL++SEE +SWGRDTQAKLGC L++LLT++AYVQ
Sbjct: 325  DMSRETMILRKRVKSLIKRNRVVEVRKLMQSEEPESWGRDTQAKLGCRLLELLTETAYVQ 384

Query: 2220 PPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPY 2041
            PPV+QSAD+PPD+RPAFRH+F+IATR+ G+++VKKYGVIECDPLV+ G+D+TVK M+IPY
Sbjct: 385  PPVDQSADTPPDIRPAFRHVFRIATRDPGKNIVKKYGVIECDPLVVVGVDRTVKQMMIPY 444

Query: 2040 VPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTK 1861
            VPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSR+QQDAV++VP KQMQ+VYEALDTLG+TK
Sbjct: 445  VPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPAKQMQQVYEALDTLGSTK 504

Query: 1860 WRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXXXXXXXXXKINQER 1681
            WRVNKRILSVVESIWA GGN+AGLV+R+DVPIPEL SDD               KINQE 
Sbjct: 505  WRVNKRILSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMELKRWKWRVRKAKKINQEL 564

Query: 1680 HSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGR 1501
            HSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGR
Sbjct: 565  HSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGR 624

Query: 1500 PLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAED 1321
            PLGKSGLRWLK+HLA+LY GG+EKL YD RI+FVEN+I +I DSA N LNGNRWWL AED
Sbjct: 625  PLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVENHIDDILDSAHNPLNGNRWWLNAED 684

Query: 1320 PFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGD 1141
            P QCLAACINLSEAL+S SPHTV+SHLPIHQDGSCNGLQHYAALGRDS EAAAVNL+AG+
Sbjct: 685  PLQCLAACINLSEALKSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLVAGE 744

Query: 1140 KPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYV 961
            KPADVY+EIA RV +I++ DS KDPATDP+ALLAKLLI QVDRKLVKQTVMTSVYGVTYV
Sbjct: 745  KPADVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYV 804

Query: 960  GAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIAS 781
            GAREQIKRRLEEKGLI DDRLLF+A+CYAAKVTLAALGELFQAAR  M WLGDCAK+IAS
Sbjct: 805  GAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAKVIAS 864

Query: 780  ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSL 601
            ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGD+VEVRKQRTAFPPNFVHSL
Sbjct: 865  ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDAVEVRKQRTAFPPNFVHSL 924

Query: 600  DGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLESF 421
            DGSHMMMTA+ACRDAGL FAGVHDSFWTHACDVD+MN+ILR+KFV+LY+MPILE LLESF
Sbjct: 925  DGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLLESF 984

Query: 420  ETSYPTLTFPALPNRGDFDLNKVVQ 346
            + SYP LTFP LP RGDFDL +V++
Sbjct: 985  QESYPALTFPPLPKRGDFDLQEVLE 1009


>ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
            lycopersicum]
          Length = 1007

 Score = 1407 bits (3642), Expect = 0.0
 Identities = 680/865 (78%), Positives = 777/865 (89%), Gaps = 1/865 (0%)
 Frame = -1

Query: 2937 PWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYY-LLRRRQIKAETEAWXXXXXXXXXXX 2761
            PW+SSLFM +L  R +   GV+ EF+E+ERR+ Y +LRRRQIKAETEAW           
Sbjct: 137  PWVSSLFMNNLFVRAKQVKGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRELE 196

Query: 2760 XXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAV 2581
                 +KLAPNLP+VKKLMLGWFEPLR+AIE+EQN + ++K++ A+AP++D+LPADKMAV
Sbjct: 197  REMCEKKLAPNLPYVKKLMLGWFEPLRQAIEREQNAEMTQKHRTAYAPHIDSLPADKMAV 256

Query: 2580 IVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQE 2401
            IVMHK+MGLLMMGGKE+RCV+VV+AAVQIG+A+E+EVRIH+F+E+TKKHQ+   GA+ QE
Sbjct: 257  IVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFMEKTKKHQKHMTGAQGQE 316

Query: 2400 DSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQ 2221
            D  +E  ILRKRVKSLIKRNRV+EV+KL++SEE +SWGRDTQAKLGC L++LLT++AYVQ
Sbjct: 317  DMSRETMILRKRVKSLIKRNRVVEVRKLMQSEEPESWGRDTQAKLGCRLLELLTETAYVQ 376

Query: 2220 PPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPY 2041
            PPV+QSAD+PPD+RPAFRH+F+IATR+ G+++VKKYGVIECDPLV+ G+D+TVK M+IPY
Sbjct: 377  PPVDQSADTPPDIRPAFRHVFRIATRDPGKNIVKKYGVIECDPLVVVGVDRTVKQMMIPY 436

Query: 2040 VPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTK 1861
            VPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSR+QQDAV++VP KQMQ+VYEALDTLG+TK
Sbjct: 437  VPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPAKQMQQVYEALDTLGSTK 496

Query: 1860 WRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXXXXXXXXXKINQER 1681
            WRVNKRILSVVE+IWA GGN+AGLV+R+DVPIPEL SDD               KINQE 
Sbjct: 497  WRVNKRILSVVETIWAGGGNIAGLVDRKDVPIPELHSDDIMELKRWKWRVRKAKKINQEL 556

Query: 1680 HSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGR 1501
            HSQRCDTELKLSVARK++DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGR
Sbjct: 557  HSQRCDTELKLSVARKLRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGR 616

Query: 1500 PLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAED 1321
            PLGKSGLRWLK+HLA+LY GG+EKL YD RI+FVEN+I +I DSA N LNGNRWWL AED
Sbjct: 617  PLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVENHIDDILDSAHNPLNGNRWWLNAED 676

Query: 1320 PFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGD 1141
            P QCLAACINLSEA++S SPHTV+SHLPIHQDGSCNGLQHYAALGRDS EAAAVNL+AG+
Sbjct: 677  PLQCLAACINLSEAVKSLSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLVAGE 736

Query: 1140 KPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYV 961
            KPADVY+EIA RV +I++ DS KDPATDP+ALLAKLLI QVDRKLVKQTVMTSVYGVTYV
Sbjct: 737  KPADVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTYV 796

Query: 960  GAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIAS 781
            GAREQIKRRLEEKGLI DDRLLF+A+CYAAKVTLAALGELFQAAR  M WLGDCAK+IAS
Sbjct: 797  GAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAKVIAS 856

Query: 780  ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSL 601
            ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGD+VEVRKQRTAFPPNFVHSL
Sbjct: 857  ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDAVEVRKQRTAFPPNFVHSL 916

Query: 600  DGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLESF 421
            DGSHMMMTA+ACRDAGL FAGVHDSFWTHACDVD+MN+ILR+KFV+LY+MPILE LLESF
Sbjct: 917  DGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDLLESF 976

Query: 420  ETSYPTLTFPALPNRGDFDLNKVVQ 346
            + SYP LTFP LP RGDFDL +V++
Sbjct: 977  QESYPALTFPPLPKRGDFDLREVLE 1001


>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName:
            Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 3B; Flags: Precursor
            gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase
            [Nicotiana tabacum]
          Length = 977

 Score = 1404 bits (3634), Expect = 0.0
 Identities = 686/866 (79%), Positives = 779/866 (89%), Gaps = 2/866 (0%)
 Frame = -1

Query: 2937 PWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYY-LLRRRQIKAETEAWXXXXXXXXXXX 2761
            PW+SSLFM SL  R +   GV+ EF+E+ERR+ Y +LRRRQIKAETEAW           
Sbjct: 106  PWVSSLFMNSLFVRAKQVQGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYRELE 165

Query: 2760 XXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAV 2581
                 +KLAPNLP+VKKL+LGWFEPLR+AIEKEQN + + K++AAFAP++D+LPADKMAV
Sbjct: 166  REMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPADKMAV 225

Query: 2580 IVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQE 2401
            IVMHK+MGLLMMGGKE+RCV+VV+AAVQIG+A+E+EVRIH+FLE+TKK Q+   GA+SQE
Sbjct: 226  IVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTKKLQKHMTGAQSQE 285

Query: 2400 DSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQ 2221
            D  KE  ILRKRVKSLIKRNRV+EV+KL++SEE +SWGRDTQAKLGC L++LLT++AYVQ
Sbjct: 286  DMSKETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGCRLLELLTETAYVQ 345

Query: 2220 PPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPY 2041
             PV+QSAD+PPD+RPAFRH+FKIATR+ G+++VKKYGVIECDPLV+AG+D+TVK M+IPY
Sbjct: 346  RPVDQSADTPPDIRPAFRHVFKIATRDPGKNIVKKYGVIECDPLVVAGVDRTVKQMMIPY 405

Query: 2040 VPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTK 1861
            VPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSR+QQDAV+ VPTKQMQ+VYEALDTLG+TK
Sbjct: 406  VPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRGVPTKQMQQVYEALDTLGSTK 465

Query: 1860 WRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELL-SDDXXXXXXXXXXXXXXXKINQE 1684
            WRVNKRIL+VVESIWA GGN+AGLV+R+DVPIPEL  SDD               KINQE
Sbjct: 466  WRVNKRILNVVESIWAGGGNIAGLVDRKDVPIPELSNSDDIMEVKKWKWKVRKSKKINQE 525

Query: 1683 RHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEG 1504
             HSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEG
Sbjct: 526  LHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEG 585

Query: 1503 RPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAE 1324
            RPLGKSGLRWLKIHLA+LY GGVEKL YD R++FVEN+I +I DSA+N LNGNRWWL AE
Sbjct: 586  RPLGKSGLRWLKIHLASLYAGGVEKLCYDARLAFVENHIHDILDSANNPLNGNRWWLNAE 645

Query: 1323 DPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAG 1144
            DPFQCLAACINLSEAL+SSSPHTV+SHLPIHQDGSCNGLQHYAALGRDS EAAAVNL+AG
Sbjct: 646  DPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNLVAG 705

Query: 1143 DKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTY 964
            +KPADVY+EIA RV +I++ DS KDPA DP+ALLAKLLI QVDRKLVKQTVMTSVYGVTY
Sbjct: 706  EKPADVYTEIALRVDHIIRGDSIKDPAIDPNALLAKLLIDQVDRKLVKQTVMTSVYGVTY 765

Query: 963  VGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIA 784
            VGAREQIKRRLEEKGLI DDRLLF+A+CYAAKVTLAALGELFQAAR  M WLGDCAK+IA
Sbjct: 766  VGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAKVIA 825

Query: 783  SENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHS 604
             ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQ+LALQREGD+VEVRKQRTAFPPNFVHS
Sbjct: 826  LENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQILALQREGDAVEVRKQRTAFPPNFVHS 885

Query: 603  LDGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLES 424
            LDGSHMMMTA+ACRDAGL+FAGVHDSFWTHACDVD+MN+ILR+KFV+LY++PILE LLE+
Sbjct: 886  LDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSLPILEDLLEN 945

Query: 423  FETSYPTLTFPALPNRGDFDLNKVVQ 346
            F+ SYP LTFP LP RGDF+L +V++
Sbjct: 946  FQKSYPALTFPPLPKRGDFNLREVLE 971


>gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]
          Length = 952

 Score = 1401 bits (3627), Expect = 0.0
 Identities = 684/863 (79%), Positives = 762/863 (88%)
 Frame = -1

Query: 2937 PWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXXX 2758
            PWISSL++KSLLFR RNR  VKIEFKEMER KYY LRRRQIKAETEAW            
Sbjct: 84   PWISSLYIKSLLFRNRNRCDVKIEFKEMERHKYYELRRRQIKAETEAWENMVKEYKELEK 143

Query: 2757 XXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAVI 2578
                +K+APNLP+ KKLMLGWFEPL EAI  EQ++Q+ KKN+ AFAPY+D+LP + MAVI
Sbjct: 144  EMCEKKMAPNLPYFKKLMLGWFEPLTEAIRTEQSLQKPKKNRIAFAPYIDSLPPESMAVI 203

Query: 2577 VMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQED 2398
            VMHKIMGLLMMGGK+DRC+RVVEAA+QIG AIE EVRIH+FLE+TK HQ+  V +ESQE+
Sbjct: 204  VMHKIMGLLMMGGKQDRCIRVVEAALQIGKAIEQEVRIHAFLEKTK-HQKEAVASESQEN 262

Query: 2397 SIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQP 2218
            S ++AA LRKRVK+L++R R +EVQKLV+SE  + W R+ QAKLGCCLI LLTQSAYVQP
Sbjct: 263  SCEKAANLRKRVKNLVRRGRGVEVQKLVKSENHEPWTREIQAKLGCCLINLLTQSAYVQP 322

Query: 2217 PVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPYV 2038
            PV+QSADSPPDVRPAFRH FKIATRE  Q++V++YGVIECDPL+L G +  VKHM++P++
Sbjct: 323  PVSQSADSPPDVRPAFRHFFKIATREPRQTVVRRYGVIECDPLILDGFESNVKHMMVPHI 382

Query: 2037 PMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTKW 1858
            PML+PPKKW+GYDKGGYLFLPSY+MRTHGSR+QQDAVK V  ++MQKV+EALDTLGNTKW
Sbjct: 383  PMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRRQQDAVKTVSPRKMQKVFEALDTLGNTKW 442

Query: 1857 RVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXXXXXXXXXKINQERH 1678
            RVNK ILSVVE IWAAGGN+AGLVNREDVP+PEL SDD               K N E H
Sbjct: 443  RVNKSILSVVEDIWAAGGNIAGLVNREDVPLPELHSDDPIEIKKWKFSIRKAKKNNMEMH 502

Query: 1677 SQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRP 1498
            S RCDTELKLSVAR MKDEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRGILEF+EGRP
Sbjct: 503  SLRCDTELKLSVARAMKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGILEFSEGRP 562

Query: 1497 LGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAEDP 1318
            LGKSGL WLK+HLANL+GGGV+KL YD R+SFVEN I E+FDSADN L+GNRWWLKAEDP
Sbjct: 563  LGKSGLYWLKLHLANLFGGGVQKLPYDERLSFVENNITEVFDSADNPLSGNRWWLKAEDP 622

Query: 1317 FQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGDK 1138
            FQ LAACIN+SEALRSSSPHTV+SHLPIHQDGSCNGLQHYAALGRDSFEAAAVNL+AG K
Sbjct: 623  FQFLAACINISEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGHK 682

Query: 1137 PADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYVG 958
            P DVYSEIAERV +IMK DSEKDPA DP+A+LAKLLIGQVDRKLVKQTVMTSVYGVTYVG
Sbjct: 683  PTDVYSEIAERVLDIMKSDSEKDPADDPNAVLAKLLIGQVDRKLVKQTVMTSVYGVTYVG 742

Query: 957  AREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIASE 778
            AREQI++RL EKG I DD++LF AACYAAKVT+AALG+LFQAARAIM WLGDCAKIIASE
Sbjct: 743  AREQIRKRLAEKGFINDDKVLFMAACYAAKVTMAALGQLFQAARAIMSWLGDCAKIIASE 802

Query: 777  NQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLD 598
            NQPVRWTTPLGLPVVQPYFKT+RHVIRTSLQVLALQREGDSVEVRKQ+TAFPPNFVHSLD
Sbjct: 803  NQPVRWTTPLGLPVVQPYFKTKRHVIRTSLQVLALQREGDSVEVRKQKTAFPPNFVHSLD 862

Query: 597  GSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLESFE 418
            GSHMMMTA+ACRDAGLRFAGVHDSFWTHACDVD+MNQILR+KFVDLY+MPILE LLESF+
Sbjct: 863  GSHMMMTAVACRDAGLRFAGVHDSFWTHACDVDKMNQILREKFVDLYSMPILEDLLESFQ 922

Query: 417  TSYPTLTFPALPNRGDFDLNKVV 349
            +SYPTL FP LP RGDFDL  V+
Sbjct: 923  SSYPTLRFPPLPKRGDFDLRNVL 945


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score = 1354 bits (3505), Expect = 0.0
 Identities = 664/866 (76%), Positives = 753/866 (86%), Gaps = 2/866 (0%)
 Frame = -1

Query: 2937 PWISSLFMKSLLFRGRNRS-GVKIEFKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXX 2761
            PWISS        R R     VK+EF+E ERR Y LLRRRQ+KAETEAW           
Sbjct: 110  PWISSFLFHDWCERNRRTGQNVKLEFRETERRNYGLLRRRQVKAETEAWERMVEEYREIE 169

Query: 2760 XXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAV 2581
                 +KLAPNLP+VK L LGWFEPLREAI+KEQ  QR+KK KAA+AP+++ LPADKMAV
Sbjct: 170  REMCEKKLAPNLPYVKALFLGWFEPLREAIDKEQRAQRTKKQKAAYAPHIELLPADKMAV 229

Query: 2580 IVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQE 2401
            IVMHK+MGL+MMG  E+ CVRVV+AAVQIG+AIE EVRIHSFLE+TK  +R +    SQE
Sbjct: 230  IVMHKMMGLVMMG-HEEGCVRVVQAAVQIGMAIEQEVRIHSFLEKTKNFERHKTVGHSQE 288

Query: 2400 DSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQ 2221
              ++E  ILRKRVKS I++ ++IEVQKLV++EE   WGRDTQAKLG  LI+LLT++AYVQ
Sbjct: 289  -GLREKEILRKRVKSFIRKKKIIEVQKLVKNEEITPWGRDTQAKLGSRLIELLTETAYVQ 347

Query: 2220 PPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPY 2041
             PVNQSAD PPDVRPAFRH FK  T+ESGQ   +KYGVIECDPLVL GLD+T KHM+IPY
Sbjct: 348  TPVNQSADCPPDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPY 407

Query: 2040 VPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTK 1861
            VPML+PPKKW+GYDKGGYLFLPSY+MRTHGSR+QQDAVK+VP +Q+QKV+EALDTLGNTK
Sbjct: 408  VPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTK 467

Query: 1860 WRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLS-DDXXXXXXXXXXXXXXXKINQE 1684
            WR+N+R+LSVVESIWA GGNL GLV+RE+VP+PE  S +D               KINQE
Sbjct: 468  WRINRRVLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQE 527

Query: 1683 RHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEG 1504
            RHS RCDTE+KLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEG
Sbjct: 528  RHSLRCDTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEG 587

Query: 1503 RPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAE 1324
            RPLGKSGLRWLKI LANLY GGVEKLSYDGR++FV+N++ ++FDSADN LNGNRWWL AE
Sbjct: 588  RPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAE 647

Query: 1323 DPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAG 1144
            DPFQCLAACINLSEALRSSSPHTV+SHLPIHQDGSCNGLQHYAALGR+S EA+AVNL+AG
Sbjct: 648  DPFQCLAACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAG 707

Query: 1143 DKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTY 964
            +KPADVYSEIA RVH IMKRDS KDPATDP ALLAK+LIGQVDRKLVKQTVMTSVYGVTY
Sbjct: 708  EKPADVYSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTY 767

Query: 963  VGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIA 784
            +GAREQIKRRL EKGLITD+RLLF+AACYAAKVTLAALGE+FQAAR IM WLG+CAK+IA
Sbjct: 768  IGAREQIKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIA 827

Query: 783  SENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHS 604
            SENQPV+WTTPLGLPV+QPY K++RH+IRTSLQVLALQREG  V +RKQRTAFPPNFVHS
Sbjct: 828  SENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHS 887

Query: 603  LDGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLES 424
            LDGSHMMMTA+ACRDAGL FAGVHDSFWTHACDVD+MNQILR+KFV+LY+MPILE+LLES
Sbjct: 888  LDGSHMMMTAVACRDAGLCFAGVHDSFWTHACDVDKMNQILREKFVELYSMPILENLLES 947

Query: 423  FETSYPTLTFPALPNRGDFDLNKVVQ 346
            F+TS+PTLTFP LP+RG+FDL +V++
Sbjct: 948  FQTSHPTLTFPPLPDRGNFDLREVLE 973


>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 882

 Score = 1334 bits (3453), Expect = 0.0
 Identities = 657/865 (75%), Positives = 747/865 (86%), Gaps = 1/865 (0%)
 Frame = -1

Query: 2937 PWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXXX 2758
            PWIS+ F K + ++  N+  VK+EFK++E+RKY LLRRRQI+ ETEAW            
Sbjct: 15   PWISAHFWKGM-YKLANKK-VKVEFKDIEKRKYNLLRRRQIREETEAWERMADEYRGLVR 72

Query: 2757 XXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAVI 2578
                RKLAPNLP+VK L+LGWFEPL+EAIEKEQ +++SKK K+AF+P ++ LPADKMAVI
Sbjct: 73   EMCERKLAPNLPYVKGLLLGWFEPLKEAIEKEQKMEKSKKQKSAFSPNIELLPADKMAVI 132

Query: 2577 VMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQED 2398
            VMHK+MGLLM+G  ED CVRVV+AAVQIG+AIE EVRIH+FLE+TK +QR +   E QE 
Sbjct: 133  VMHKMMGLLMVG-HEDGCVRVVQAAVQIGMAIEQEVRIHNFLEKTKNYQRKKTMHEVQET 191

Query: 2397 SIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQP 2218
              KE  +LRKRV SLI+R R++EVQ LV+ +E K W R TQAKLG  LI+LLT++AYVQP
Sbjct: 192  MDKEKEVLRKRVNSLIRRKRLMEVQNLVKQDETKPWSRGTQAKLGSRLIELLTETAYVQP 251

Query: 2217 PVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPYV 2038
            PVNQS D PPDVRPAFRHIFK  T+  GQ +VKKYGVIECDPL+L GLD T KHM+IPY 
Sbjct: 252  PVNQSEDIPPDVRPAFRHIFKTLTKNPGQKIVKKYGVIECDPLILTGLDGTAKHMLIPYF 311

Query: 2037 PMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTKW 1858
            PMLVPPKKW+GYDKGG+LFLPSY+MRTHGSRQQQ AV++VP KQMQKV+EALDTLGNTKW
Sbjct: 312  PMLVPPKKWKGYDKGGHLFLPSYVMRTHGSRQQQVAVRSVPGKQMQKVFEALDTLGNTKW 371

Query: 1857 RVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXXXXXXXXXXKINQER 1681
            RVN+R+L VVE IW +GGN+AGLV+RED+PIPE   SDD               KINQER
Sbjct: 372  RVNRRLLDVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWSVRKAKKINQER 431

Query: 1680 HSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGR 1501
            HSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHL HLSSDLCRG+LEF EGR
Sbjct: 432  HSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFEEGR 491

Query: 1500 PLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAED 1321
            PLGKSGLRWLKIHLANLY GGVEKLS+DGR++FVEN+++EIFDSA N +NG RWWLKAED
Sbjct: 492  PLGKSGLRWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPVNGKRWWLKAED 551

Query: 1320 PFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGD 1141
            PFQCLAACINLSEAL S+SPHTV+SHLPIHQDGSCNGLQHYAALGRD+ EAAAVNL+A +
Sbjct: 552  PFQCLAACINLSEALNSASPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAAE 611

Query: 1140 KPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYV 961
            KP+DVYSEIA RVH I++RDS KDPAT+P ALLAK+L+ QVDRKLVKQTVMTSVYGVTYV
Sbjct: 612  KPSDVYSEIAVRVHEIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQTVMTSVYGVTYV 671

Query: 960  GAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIAS 781
            GAREQIKRRLEEKG ITDDRLLFSAACY AKVTL ALGELFQAAR IM WLGDCAKIIAS
Sbjct: 672  GAREQIKRRLEEKGHITDDRLLFSAACYTAKVTLTALGELFQAARDIMSWLGDCAKIIAS 731

Query: 780  ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSL 601
            E+QPV+WTTPLGLPVVQPY+KT+RH+I+TSLQ+LALQREG SV+VRKQRTAFPPNFVHSL
Sbjct: 732  EDQPVQWTTPLGLPVVQPYYKTERHLIKTSLQILALQREGSSVQVRKQRTAFPPNFVHSL 791

Query: 600  DGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLESF 421
            DGSHMMMTA+ACRDAGL FAGVHDSFWTHA DVD MN+ILR+KFV+LYNMPILE+LLE F
Sbjct: 792  DGSHMMMTAVACRDAGLCFAGVHDSFWTHATDVDLMNRILREKFVELYNMPILENLLEDF 851

Query: 420  ETSYPTLTFPALPNRGDFDLNKVVQ 346
            +TSYPTL FP LP RG+FDL KV++
Sbjct: 852  QTSYPTLQFPPLPERGNFDLQKVLR 876


>gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score = 1333 bits (3451), Expect = 0.0
 Identities = 652/865 (75%), Positives = 741/865 (85%), Gaps = 1/865 (0%)
 Frame = -1

Query: 2937 PWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXXX 2758
            PWI+SLF+K +  R      +K+E KE+ERR Y +LRRRQIKAETEAW            
Sbjct: 109  PWIASLFLKGIYKRANQE--LKLESKEIERRNYNVLRRRQIKAETEAWERMVDEYKDLEK 166

Query: 2757 XXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAVI 2578
                +KLAPNLP+VK L LGWFEPLREAI +EQ  Q++KK+KAAFAP++D LPADKMA+I
Sbjct: 167  VMREKKLAPNLPYVKALFLGWFEPLREAIAREQKTQQTKKHKAAFAPHIDLLPADKMALI 226

Query: 2577 VMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQED 2398
            VMHK+MGL+M+G  +D CV+VV+AAV IG+AIE EVRIHSFLE+TK  Q+ + G   ++ 
Sbjct: 227  VMHKMMGLVMVGN-QDGCVQVVQAAVHIGMAIEQEVRIHSFLEKTKNLQKKKTGVADEDG 285

Query: 2397 SIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQP 2218
              KE  ILRKRV  LI+R R+ EVQKL+  EE K WGRD QAKLG  LI+LLT++AYVQP
Sbjct: 286  LSKEKEILRKRVNGLIRRKRLNEVQKLLIKEEMKPWGRDKQAKLGSRLIELLTETAYVQP 345

Query: 2217 PVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPYV 2038
            P++Q ADSPPDVRPAFRH FK   +  GQ +VK YGVIECDPLVL GLDKT KHM+IPYV
Sbjct: 346  PLSQLADSPPDVRPAFRHRFKAVAKSPGQKIVKNYGVIECDPLVLTGLDKTAKHMLIPYV 405

Query: 2037 PMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTKW 1858
            PMLVPPK+W+GYDKGG+LFLPSY+MRTHGSR+Q DA++ +   QMQKV+EALD LG+TKW
Sbjct: 406  PMLVPPKRWKGYDKGGHLFLPSYVMRTHGSRKQVDAMRNISRNQMQKVFEALDMLGSTKW 465

Query: 1857 RVNKRILSVVESIWAAGGNLAGLVNREDVPIPELL-SDDXXXXXXXXXXXXXXXKINQER 1681
            RVNK++LSVVESIWA GGN+AGLVNREDVP+P+   S+D               KINQER
Sbjct: 466  RVNKKVLSVVESIWARGGNIAGLVNREDVPVPDKSPSEDLKEIQEWKWSVRKAKKINQER 525

Query: 1680 HSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGR 1501
            HSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGR
Sbjct: 526  HSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGR 585

Query: 1500 PLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAED 1321
            PLGKSGLRWLKIHLANLY GGVEKLSY+GR++FV+N+I +IFDSA N +NGNRWWL AED
Sbjct: 586  PLGKSGLRWLKIHLANLYAGGVEKLSYEGRLAFVDNHIDDIFDSATNPVNGNRWWLTAED 645

Query: 1320 PFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGD 1141
            P QCLAACINLSEAL S SPHTV+SHLPIHQDGSCNGLQHYAALGRDS EAAAVNL+ GD
Sbjct: 646  PLQCLAACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVDGD 705

Query: 1140 KPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYV 961
            KPADVYSEIA RVH IMKRDS KDP T P+ALLA++L+ Q+DRKLVKQTVMTSVYGVTYV
Sbjct: 706  KPADVYSEIAARVHEIMKRDSNKDPTTSPNALLARILVNQIDRKLVKQTVMTSVYGVTYV 765

Query: 960  GAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIAS 781
            GAREQIKRRLEEKGLITDDRLLF+AACYAAKVTLAALGE+FQAAR IM WLGDCAK+IAS
Sbjct: 766  GAREQIKRRLEEKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIAS 825

Query: 780  ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSL 601
            ENQPVRWTTPLGLPVVQPY K++RH+IRTSLQVLALQRE +SV++RKQRTAFPPNFVHSL
Sbjct: 826  ENQPVRWTTPLGLPVVQPYCKSERHLIRTSLQVLALQRESNSVDIRKQRTAFPPNFVHSL 885

Query: 600  DGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLESF 421
            DGSHMMMTA+ACRDAGLRFAGVHDSFWTH CDVD+MN+ILR+KFV+LY+MPILESLLESF
Sbjct: 886  DGSHMMMTALACRDAGLRFAGVHDSFWTHPCDVDQMNEILREKFVELYSMPILESLLESF 945

Query: 420  ETSYPTLTFPALPNRGDFDLNKVVQ 346
            + SYP LTFP LP RGDFDL +V++
Sbjct: 946  QASYPALTFPPLPERGDFDLLQVLE 970


>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
            gi|222854390|gb|EEE91937.1| hypothetical protein
            POPTR_0006s19490g [Populus trichocarpa]
          Length = 982

 Score = 1328 bits (3436), Expect = 0.0
 Identities = 656/865 (75%), Positives = 742/865 (85%), Gaps = 1/865 (0%)
 Frame = -1

Query: 2937 PWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXXX 2758
            PWIS+L+ K        +  VK+E K++E+RKY LLRRRQI+ ETEAW            
Sbjct: 115  PWISALYWKGTHKIANKK--VKLELKDIEKRKYNLLRRRQIREETEAWERMAEEYTGLVK 172

Query: 2757 XXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAVI 2578
                RKLAPNLP+VK L LGWFEPL+EAIE+EQ +++SKK K+AF+P ++ LPADKMAVI
Sbjct: 173  EMCERKLAPNLPYVKSLFLGWFEPLKEAIEREQKLEKSKKQKSAFSPNIELLPADKMAVI 232

Query: 2577 VMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQED 2398
            VMHK+MGL+M+G  ED CVRVV+AAVQIG+AIE EVRIH+FLE+TK HQR +   + QE 
Sbjct: 233  VMHKMMGLVMVG-HEDGCVRVVQAAVQIGIAIEQEVRIHNFLEKTKNHQRKKTMHDVQES 291

Query: 2397 SIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQP 2218
              KE  +LRKRV SLI+R R++EVQ LV  +E K W RD QAKLG  LI+LLT++AYVQP
Sbjct: 292  MDKEKEMLRKRVNSLIRRKRLMEVQNLVIQDETKPWNRDKQAKLGSRLIELLTETAYVQP 351

Query: 2217 PVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPYV 2038
            PV+QS   PPDVRPAFRHIFK  T+  GQ  VKKYGVIECDPL+L GLD T KHM+IPY 
Sbjct: 352  PVDQSEGIPPDVRPAFRHIFKSVTKNPGQKTVKKYGVIECDPLILTGLDGTAKHMLIPYF 411

Query: 2037 PMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTKW 1858
            PMLVPPKKWRGYDKGG+LFLPSY+MRTHGSRQQQDAV++VP KQMQKV+EALDTLGNTKW
Sbjct: 412  PMLVPPKKWRGYDKGGHLFLPSYIMRTHGSRQQQDAVRSVPGKQMQKVFEALDTLGNTKW 471

Query: 1857 RVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLS-DDXXXXXXXXXXXXXXXKINQER 1681
            RVN ++L VVE IWA+GGN AGLVNR D+PIPE LS DD               KINQER
Sbjct: 472  RVNGKVLDVVERIWASGGNNAGLVNRGDIPIPEKLSSDDLTEIQKWKWSVRKAKKINQER 531

Query: 1680 HSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGR 1501
            HSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHL HLSSDLCRG+LEFAEGR
Sbjct: 532  HSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFAEGR 591

Query: 1500 PLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAED 1321
            PLGKSGL WLKIHLANLY GGVEKLS+DGR++FVEN+++EIFDSA+N +NG RWWL AED
Sbjct: 592  PLGKSGLCWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAENPVNGKRWWLTAED 651

Query: 1320 PFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGD 1141
            PFQCLAACINLSEAL+S+SPHTV+SHLPIHQDGSCNGLQHYAALGRDS EAAAVNL+A +
Sbjct: 652  PFQCLAACINLSEALKSASPHTVISHLPIHQDGSCNGLQHYAALGRDSQEAAAVNLVAAE 711

Query: 1140 KPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYV 961
            KP+DVYSEIA RVH I++RDS KDPAT+P ALLAK+LI +VDRKLVKQTVMTSVYGVTYV
Sbjct: 712  KPSDVYSEIATRVHEIIRRDSNKDPATNPHALLAKVLIDEVDRKLVKQTVMTSVYGVTYV 771

Query: 960  GAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIAS 781
            GAREQIKRRLEEKG ITDDR+LFSAACYAAKVTL ALGELFQAAR IMGWLGDCAK+IAS
Sbjct: 772  GAREQIKRRLEEKGHITDDRVLFSAACYAAKVTLTALGELFQAARDIMGWLGDCAKVIAS 831

Query: 780  ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSL 601
            E+QPVRWTTPLGLPVVQPY+KTQRH+IRTSLQVLALQREG SV+VRKQRTAFPPNFVHSL
Sbjct: 832  EDQPVRWTTPLGLPVVQPYYKTQRHLIRTSLQVLALQREGSSVQVRKQRTAFPPNFVHSL 891

Query: 600  DGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLESF 421
            DGSHMMMTA+ACRDA LRFAGVHDSFWTHA D D MN+ILR+KFV+LYNMPILE+LLE F
Sbjct: 892  DGSHMMMTAVACRDADLRFAGVHDSFWTHARDADLMNRILREKFVELYNMPILENLLEDF 951

Query: 420  ETSYPTLTFPALPNRGDFDLNKVVQ 346
            +TSYPTL FP+LP RG+FDL +V++
Sbjct: 952  QTSYPTLKFPSLPERGNFDLQEVLR 976


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 973

 Score = 1327 bits (3434), Expect = 0.0
 Identities = 647/865 (74%), Positives = 747/865 (86%), Gaps = 1/865 (0%)
 Frame = -1

Query: 2937 PWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXXX 2758
            PWI+SLF+K + F+  N+  +K+E KE++RRKY LLRRRQIKAETEAW            
Sbjct: 106  PWIASLFLKGM-FKKVNKE-LKVESKEIDRRKYNLLRRRQIKAETEAWEKMVEDYKDLER 163

Query: 2757 XXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAVI 2578
                +KLAP+LP+VK L LGWFEPLREAI KEQ  Q++KK+K AFAP++D LPADKMA+I
Sbjct: 164  VMREKKLAPSLPYVKALFLGWFEPLREAIAKEQKAQQTKKHKQAFAPHIDLLPADKMALI 223

Query: 2577 VMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQED 2398
            VMHK+MGL+MMG  +D CV+VV+AAV IG+AIE EVRIHSFLE++K  QR +     ++ 
Sbjct: 224  VMHKLMGLVMMGN-QDGCVQVVQAAVHIGMAIEQEVRIHSFLEKSKSLQRKKTSVADEDG 282

Query: 2397 SIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQP 2218
              KE  ILRKRV  LI+R R++EVQKL++ E+ K WGRDTQAKLG  LI+LLT++A+VQP
Sbjct: 283  LSKEKEILRKRVNGLIRRKRLVEVQKLLKKEDMKPWGRDTQAKLGSRLIELLTETAHVQP 342

Query: 2217 PVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPYV 2038
            P++Q AD PPDVRPAFRH  K A +  GQ LVK YGVIECDPLVLAGLDKT KHM+IPYV
Sbjct: 343  PLDQLADGPPDVRPAFRHRLKAAAKSPGQKLVKNYGVIECDPLVLAGLDKTAKHMLIPYV 402

Query: 2037 PMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTKW 1858
            PMLVPPK+W+GYDKGG+LFLPSY+MRTHGSR+Q D ++ +  +QMQKV+EALD LG+TKW
Sbjct: 403  PMLVPPKRWKGYDKGGHLFLPSYVMRTHGSRKQVDTMRNISGRQMQKVFEALDMLGSTKW 462

Query: 1857 RVNKRILSVVESIWAAGGNLAGLVNREDVPIPELL-SDDXXXXXXXXXXXXXXXKINQER 1681
            R+NK++L+VVESIWA GGN+AGLV+REDVP+PE   S+D               K+NQER
Sbjct: 463  RINKKVLNVVESIWARGGNIAGLVDREDVPVPEKPPSEDPTEIQEWRWSARKAKKLNQER 522

Query: 1680 HSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGR 1501
            HSQRCDTELKLSVAR+MKDE+GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGR
Sbjct: 523  HSQRCDTELKLSVARRMKDEDGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGR 582

Query: 1500 PLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAED 1321
            PLGKSGLRWLKIHLANLY GGVEKLSYDGRISFV+N+I +IFDSA N +NGNRWWL AED
Sbjct: 583  PLGKSGLRWLKIHLANLYSGGVEKLSYDGRISFVDNHIDDIFDSATNPVNGNRWWLTAED 642

Query: 1320 PFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGD 1141
            P QCLAACINLSEAL S SPHTV+SHLPIHQDGSCNGLQHYAALGRD+ EAAAVNL+AG+
Sbjct: 643  PLQCLAACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGE 702

Query: 1140 KPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYV 961
            KPADVYSEIA RVH+IMKRDS KDP T+P+ALLAK+L+ Q+DRKLVKQTVMTSVYGVTYV
Sbjct: 703  KPADVYSEIAVRVHDIMKRDSNKDPTTNPNALLAKVLVNQIDRKLVKQTVMTSVYGVTYV 762

Query: 960  GAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIAS 781
            GAREQIKRRLEEKGLITDDRLLF+AACYAAKVTLAALGE+FQAAR IM WLGDCAK+IAS
Sbjct: 763  GAREQIKRRLEEKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSWLGDCAKVIAS 822

Query: 780  ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSL 601
            ENQPVRWTTPLGLPVVQPY K++RH+IRTSLQVLALQRE + V+VRKQRTAFPPNFVHSL
Sbjct: 823  ENQPVRWTTPLGLPVVQPYCKSERHLIRTSLQVLALQRESNLVDVRKQRTAFPPNFVHSL 882

Query: 600  DGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLESF 421
            DGSHMMMTA+ACRDAG+RFAGVHDSFWTHACDVD+MNQILR+ FV+LY+ PILE+LLESF
Sbjct: 883  DGSHMMMTALACRDAGIRFAGVHDSFWTHACDVDQMNQILRENFVELYSKPILENLLESF 942

Query: 420  ETSYPTLTFPALPNRGDFDLNKVVQ 346
            + +YP LTFP LP RGDFDL +V++
Sbjct: 943  QAAYPELTFPPLPERGDFDLQEVLK 967


>gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
          Length = 978

 Score = 1321 bits (3418), Expect = 0.0
 Identities = 646/867 (74%), Positives = 763/867 (88%), Gaps = 3/867 (0%)
 Frame = -1

Query: 2937 PWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXXX 2758
            PWIS+LF+K L ++  N++ VKIE KE+E+RKY LLRRRQ+K ETEAW            
Sbjct: 110  PWISALFLKGL-YKMTNQT-VKIEHKEIEKRKYNLLRRRQVKEETEAWEKMVEEYRELQR 167

Query: 2757 XXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQR--SKKNKAAFAPYVDALPADKMA 2584
                +KLAPNLP+VK L LGWFEP+REAI +EQ VQ+  SKK +AA+AP+++ LPADKMA
Sbjct: 168  EMCEKKLAPNLPYVKGLFLGWFEPMREAIAREQKVQKGKSKKLRAAYAPHIELLPADKMA 227

Query: 2583 VIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQ 2404
            VIVMHK+MGL+M G +E+  V+VV+AAV IGVAIE EVRIH+FLE+TK +QR +   E Q
Sbjct: 228  VIVMHKMMGLVM-GAQENGFVQVVQAAVHIGVAIEQEVRIHNFLEKTKNYQRKKTTDEVQ 286

Query: 2403 EDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYV 2224
              S KE  IL+KRV SLI+R R++EVQKLV++EE K WGRD QAKLG  L++LLT++AYV
Sbjct: 287  GLS-KEKEILKKRVNSLIRRRRLVEVQKLVKNEEIKPWGRDAQAKLGSRLLELLTETAYV 345

Query: 2223 QPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIP 2044
            QPP++QS DSPPDV+PAFRH FK  +++ G+ ++K+YGVIECDPL+L+GLD++ KHM+IP
Sbjct: 346  QPPIDQSGDSPPDVQPAFRHKFKTISKDPGKKMMKRYGVIECDPLILSGLDRSAKHMLIP 405

Query: 2043 YVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNT 1864
            YVPMLVPPKKW+GYDKGGYLFLPSY+MRTHGSR+QQDA+K V  K+MQKV+EALDTLG+T
Sbjct: 406  YVPMLVPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDALKGVHVKKMQKVFEALDTLGST 465

Query: 1863 KWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXXXXXXXXXXKINQ 1687
            KWRVNK++L+VVESIWA+GGN+AGLV+R D+PIPE   S+D               KIN+
Sbjct: 466  KWRVNKKVLAVVESIWASGGNIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKANKINR 525

Query: 1686 ERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAE 1507
            ERHSQRCDTELKLSVARKM++EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAE
Sbjct: 526  ERHSQRCDTELKLSVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAE 585

Query: 1506 GRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKA 1327
            GRPLG+SGL WLKIHLANL+ GGVEKLS+DGR++FV+N++ +IFDSA+N +NGNRWWL A
Sbjct: 586  GRPLGRSGLHWLKIHLANLFAGGVEKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTA 645

Query: 1326 EDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIA 1147
            EDPFQCLAACINLSE+L+SSSPH+V+S+LPIHQDGSCNGLQHYAALGRDS EAAAVNL+A
Sbjct: 646  EDPFQCLAACINLSESLKSSSPHSVLSYLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVA 705

Query: 1146 GDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVT 967
            G+KPADVYSEIA RVHNIMKRDS+KDPAT+P+A LAKLLI QVDRKLVKQTVMTSVYGVT
Sbjct: 706  GEKPADVYSEIAVRVHNIMKRDSDKDPATNPNASLAKLLIDQVDRKLVKQTVMTSVYGVT 765

Query: 966  YVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKII 787
            +VGAREQIKRRLEEKG ITDDR+LF+AACY AKVTLAALGELFQAAR IMGWLGDCAK+I
Sbjct: 766  FVGAREQIKRRLEEKGHITDDRVLFAAACYTAKVTLAALGELFQAARNIMGWLGDCAKVI 825

Query: 786  ASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVH 607
            ASENQPV+WTTPLGLPVVQPY+K++RH+IRTSLQVLALQREGDSVEVRKQRTAFPPNFVH
Sbjct: 826  ASENQPVQWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGDSVEVRKQRTAFPPNFVH 885

Query: 606  SLDGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLE 427
            SLDGSHMMMTA+ACRDAGL FAGVHDSFWTHACDV++MNQILR+KFV+LY+MP+LE+L E
Sbjct: 886  SLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLENLFE 945

Query: 426  SFETSYPTLTFPALPNRGDFDLNKVVQ 346
            S +TSYP+L FP LP RG+FDL +V++
Sbjct: 946  SVQTSYPSLVFPPLPERGNFDLREVLK 972


>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Citrus
            sinensis]
          Length = 1009

 Score = 1316 bits (3405), Expect = 0.0
 Identities = 641/866 (74%), Positives = 749/866 (86%), Gaps = 2/866 (0%)
 Frame = -1

Query: 2937 PWISSLFMKSLLFRGRNRSGVKI-EFKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXX 2761
            PW SS+F+K L  R      +K+ E++EM++RK+ LLRRRQ+K ETEAW           
Sbjct: 145  PWFSSIFLKGLYKR------IKLQEYREMKKRKFNLLRRRQVKQETEAWERMVDEYKELE 198

Query: 2760 XXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAV 2581
                 ++LAPNLPH+K L LGWF PLREAIE+EQ +QR+KK KAA+AP+++ LPADK+AV
Sbjct: 199  AKMIEKRLAPNLPHIKGLFLGWFGPLREAIEREQKMQRTKKQKAAYAPHIELLPADKVAV 258

Query: 2580 IVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQE 2401
            IVMHK+MGL+M  G EDRCV+VV+AAV IG+AIE E+RIHSFLE+TK ++R ++ A+++E
Sbjct: 259  IVMHKMMGLVM-AGHEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKIIADTEE 317

Query: 2400 DSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQ 2221
               KE  +LRKRV SLIK  RV+E QKL+++EE K WGRDTQAKLG  L++LL ++AYVQ
Sbjct: 318  VLSKEKELLRKRVNSLIKSKRVMEAQKLLKNEETKPWGRDTQAKLGSRLVELLIETAYVQ 377

Query: 2220 PPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPY 2041
             PVN +  SPPDVRPAFRH FK   +  GQ   K+YGV+ECDPLVLAGLD++ KHM+IPY
Sbjct: 378  HPVNPADYSPPDVRPAFRHRFKTILKHPGQKTTKRYGVVECDPLVLAGLDRSAKHMLIPY 437

Query: 2040 VPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTK 1861
            VPMLVPPKKW+GY+KGGYLFLPSY+MRTHGSR+QQ+A+K+V    M+KV+EALDTLG+TK
Sbjct: 438  VPMLVPPKKWKGYNKGGYLFLPSYVMRTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTK 497

Query: 1860 WRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXXXXXXXXXXKINQE 1684
            WRVNK++LSV+ESIW +GGN+AGLV+R DVPIPE  LS+D               KINQE
Sbjct: 498  WRVNKQVLSVLESIWVSGGNIAGLVDRNDVPIPEKPLSEDMTEVQKWKWSVRKAKKINQE 557

Query: 1683 RHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEG 1504
            RHSQRCDTELKLSVAR+MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD+CRG+LEFAEG
Sbjct: 558  RHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEG 617

Query: 1503 RPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAE 1324
            RPLGKSGLRWLKIHLANL+ GGVEKLS+DGR++FVEN++ EIFDSA+N +NG+RWWL AE
Sbjct: 618  RPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRWWLTAE 677

Query: 1323 DPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAG 1144
            DPFQCLAACINLSEAL+SSSPH+V+SHLPIHQDGSCNGLQHYAALGR++ EAAAVNL+AG
Sbjct: 678  DPFQCLAACINLSEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAAAVNLVAG 737

Query: 1143 DKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTY 964
            +KPADVYSEIA RVH IMKRDS KDP+  P ALLAK+LI QVDRKLVKQTVMTSVYGVT+
Sbjct: 738  EKPADVYSEIAVRVHEIMKRDSNKDPSKHPQALLAKILIDQVDRKLVKQTVMTSVYGVTF 797

Query: 963  VGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIA 784
            VGAREQIKRRLEEKG ITDDR LF+AACYAAKVTL ALGE+F+AAR+IMGWLGDCAK+IA
Sbjct: 798  VGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLGDCAKVIA 857

Query: 783  SENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHS 604
            SENQPVRWTTPLGLPVVQPY K +RH+IRTSLQVLALQREG SVE+RKQRTAFPPNFVHS
Sbjct: 858  SENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGKSVEIRKQRTAFPPNFVHS 917

Query: 603  LDGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLES 424
            LDGSHMMMTA+ACRDAGL FAGVHDSFWTHACDVD MNQILR+KFV+LYNMPILE+LLES
Sbjct: 918  LDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPILENLLES 977

Query: 423  FETSYPTLTFPALPNRGDFDLNKVVQ 346
            F+TSYPTL+FP LP RG+FDL +V++
Sbjct: 978  FQTSYPTLSFPPLPERGNFDLEEVLE 1003


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score = 1308 bits (3385), Expect = 0.0
 Identities = 635/800 (79%), Positives = 720/800 (90%), Gaps = 1/800 (0%)
 Frame = -1

Query: 2742 KLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAVIVMHKI 2563
            KLAPNLP+VK L LGWFEPLREAI+KEQ  QR+KK KAA+AP+++ LPADKMAVIVMHK+
Sbjct: 5    KLAPNLPYVKALFLGWFEPLREAIDKEQRAQRTKKQKAAYAPHIELLPADKMAVIVMHKM 64

Query: 2562 MGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQEDSIKEA 2383
            MGL+MMG  E+ CVRVV+AAVQIG+AIE EVRIHSFLE+TK  +R +    SQE  ++E 
Sbjct: 65   MGLVMMG-HEEGCVRVVQAAVQIGMAIEQEVRIHSFLEKTKNFERHKTVGHSQE-GLREK 122

Query: 2382 AILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQPPVNQS 2203
             ILRKRVKS I++ ++IEVQKLV++EE   WGRDTQAKLG  LI+LLT++AYVQ PVNQS
Sbjct: 123  EILRKRVKSFIRKKKIIEVQKLVKNEEITPWGRDTQAKLGSRLIELLTETAYVQTPVNQS 182

Query: 2202 ADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPYVPMLVP 2023
            AD PPDVRPAFRH FK  T+ESGQ   +KYGVIECDPLVL GLD+T KHM+IPYVPML+P
Sbjct: 183  ADCPPDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIP 242

Query: 2022 PKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTKWRVNKR 1843
            PKKW+GYDKGGYLFLPSY+MRTHGSR+QQDAVK+VP +Q+QKV+EALDTLGNTKWR+N+R
Sbjct: 243  PKKWKGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRR 302

Query: 1842 ILSVVESIWAAGGNLAGLVNREDVPIPELLS-DDXXXXXXXXXXXXXXXKINQERHSQRC 1666
            +LSVVESIWA GGNL GLV+RE+VP+PE  S +D               KINQERHS RC
Sbjct: 303  VLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRC 362

Query: 1665 DTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKS 1486
            DTE+KLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKS
Sbjct: 363  DTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKS 422

Query: 1485 GLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAEDPFQCL 1306
            GLRWLKI LANLY GGVEKLSYDGR++FV+N++ ++FDSADN LNGNRWWL AEDPFQCL
Sbjct: 423  GLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCL 482

Query: 1305 AACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGDKPADV 1126
            AACINLSEALRSSSPHTV+SHLPIHQDGSCNGLQHYAALGR+S EA+AVNL+AG+KPADV
Sbjct: 483  AACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGEKPADV 542

Query: 1125 YSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQ 946
            YSEIA RVH IMKRDS KDPATDP ALLAK+LIGQVDRKLVKQTVMTSVYGVTY+GAREQ
Sbjct: 543  YSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQ 602

Query: 945  IKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIASENQPV 766
            IKRRL EKGLITD+RLLF+AACYAAKVTLAALGE+FQAAR IM WLG+CAK+IASENQPV
Sbjct: 603  IKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQPV 662

Query: 765  RWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHM 586
            +WTTPLGLPV+QPY K++RH+IRTSLQVLALQREG  V +RKQRTAFPPNFVHSLDGSHM
Sbjct: 663  QWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHM 722

Query: 585  MMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLESFETSYP 406
            MMTA+ACRDAGL FAGVHDSFWTHACDVD+MNQILR+KFV+LY+MPILE+LLESF+TS+P
Sbjct: 723  MMTAVACRDAGLCFAGVHDSFWTHACDVDKMNQILREKFVELYSMPILENLLESFQTSHP 782

Query: 405  TLTFPALPNRGDFDLNKVVQ 346
            TLTFP LP+RG+FDL +V++
Sbjct: 783  TLTFPPLPDRGNFDLREVLE 802


>gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
          Length = 857

 Score = 1303 bits (3373), Expect = 0.0
 Identities = 637/848 (75%), Positives = 748/848 (88%), Gaps = 4/848 (0%)
 Frame = -1

Query: 2877 VKIEFKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXXXXXXXRKLAPNLPHVKKLMLG 2698
            VKIE KE+E+RKY LLRRRQ+K ETEAW                +KLAPNLP+VK L LG
Sbjct: 6    VKIEHKEIEKRKYNLLRRRQVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLG 65

Query: 2697 WFEPLREAIEKEQNVQR--SKKNKAAFAPYVDALPADKMAVIVMHKIMGLLMMGGKEDRC 2524
            WFEP+REAI +EQ VQ+  SKK +AA+AP+++ LPADKMAVIVMHK+MGL+M G +E+  
Sbjct: 66   WFEPMREAIAREQKVQKGKSKKLRAAYAPHIELLPADKMAVIVMHKMMGLVM-GAQENGF 124

Query: 2523 VRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKR 2344
            V+VV+AAV IGVAIE EVRIH+FLE+TK +QR +   E Q  S KE  IL+KRV SLI+R
Sbjct: 125  VQVVQAAVHIGVAIEQEVRIHNFLEKTKNYQRKKTTDEVQGLS-KEKEILKKRVNSLIRR 183

Query: 2343 NRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRH 2164
             R++EVQKLV++EE K WGRD QAKLG  L++LLT++AYVQPP++QS DSPPDV+PAFRH
Sbjct: 184  RRLVEVQKLVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPDVQPAFRH 243

Query: 2163 IFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYL 1984
             FK  +++ G+ ++K+YGVIECDPL+L+GLD++ KHM+IPYVPMLVPPKKW+GYDKGGYL
Sbjct: 244  KFKTISKDPGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKKWKGYDKGGYL 303

Query: 1983 FLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTKWRVNKRILSVVESIWAAGG 1804
            FLPSY+MRTHGSR+QQDA+K V  K+MQKV+EALDTLG+TKWRVNK++L+VVESIWA+GG
Sbjct: 304  FLPSYVMRTHGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVESIWASGG 363

Query: 1803 NLAGLVNREDVPIPEL-LSDDXXXXXXXXXXXXXXXKINQERHSQRCDTELKLSVARKMK 1627
            N+AGLV+R D+PIPE   S+D               KIN+ERHSQRCDTELKLSVARKM+
Sbjct: 364  NIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKLSVARKME 423

Query: 1626 DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY 1447
            +EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLG+SGL WLKIHLANL+
Sbjct: 424  NEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLF 483

Query: 1446 GGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAEDPFQCLAACINLSEALRSS 1267
             GGVEKLS+DGR++FV+N++ +IFDSA+N +NGNRWWL AEDPFQCLAACINLSE+L+SS
Sbjct: 484  AGGVEKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSS 543

Query: 1266 SPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMK 1087
            SPH+V+S+LPIHQDGSCNGLQHYAALGRDS EAAAVNL+AG+KPADVYSEIA RVHNIMK
Sbjct: 544  SPHSVLSYLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMK 603

Query: 1086 RDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITD 907
            RDS+KDPAT+P+A LAKLLI QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG ITD
Sbjct: 604  RDSDKDPATNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITD 663

Query: 906  DRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQP 727
            DR+LF+AACY AKVTLAALGELFQAAR IMGWLGDCAK+IASENQPV+WTTPLGLPVVQP
Sbjct: 664  DRVLFAAACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPLGLPVVQP 723

Query: 726  YFKTQRHVIRTSLQVLALQREGDS-VEVRKQRTAFPPNFVHSLDGSHMMMTAIACRDAGL 550
            Y+K++RH+IRTSLQVLALQREGDS VEVRKQRTAFPPNFVHSLDGSHMMMTA+ACRDAGL
Sbjct: 724  YYKSERHLIRTSLQVLALQREGDSVVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGL 783

Query: 549  RFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLESFETSYPTLTFPALPNRGD 370
             FAGVHDSFWTHACDV++MNQILR+KFV+LY+MP+LE+L ES +TSYP+L FP LP RG+
Sbjct: 784  HFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLENLFESVQTSYPSLVFPPLPERGN 843

Query: 369  FDLNKVVQ 346
            FDL +V++
Sbjct: 844  FDLREVLK 851


>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
            gi|557556792|gb|ESR66806.1| hypothetical protein
            CICLE_v10007333mg [Citrus clementina]
          Length = 1012

 Score = 1303 bits (3371), Expect = 0.0
 Identities = 635/866 (73%), Positives = 746/866 (86%), Gaps = 2/866 (0%)
 Frame = -1

Query: 2937 PWISSLFMKSLLFRGRNRSGVKI-EFKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXX 2761
            PW SS+F+K L  R      +K+ E++EM++RK+ LLRRRQ+K ETEAW           
Sbjct: 148  PWFSSIFLKGLYKR------IKLQEYREMKKRKFNLLRRRQVKQETEAWERMVDEYKELE 201

Query: 2760 XXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAV 2581
                 ++LAPNLPH+K L LGWF PL EAIE+EQ +QR+KK KAA+AP+++ LPADKMAV
Sbjct: 202  AKMIEKRLAPNLPHIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIELLPADKMAV 261

Query: 2580 IVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQE 2401
            IVMHK+MGL+M  G EDRCV+VV+AAV IG+AIE E+RIHSFLE+TK ++R ++ A+++E
Sbjct: 262  IVMHKMMGLVM-AGHEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKIIADTEE 320

Query: 2400 DSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQ 2221
               KE  +LRKRV SLIK  RV+E QKL+++EE K WGRDTQAKLG  L++LL ++AYVQ
Sbjct: 321  VLSKEKELLRKRVNSLIKSKRVMEAQKLLKNEETKPWGRDTQAKLGSRLVELLIETAYVQ 380

Query: 2220 PPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPY 2041
             PVN +  SPPDVRPAFRH FK   +  GQ   K+YGV+ECDPLVL GLD++ KHM+IPY
Sbjct: 381  HPVNPADYSPPDVRPAFRHRFKTILKHPGQKTTKRYGVVECDPLVLEGLDRSAKHMLIPY 440

Query: 2040 VPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTK 1861
            VPMLVPPKKW+GY+KGGYLFLPSY+MRTHGSR+QQ+A+K+V    M+KV+EALDTLG+TK
Sbjct: 441  VPMLVPPKKWKGYNKGGYLFLPSYVMRTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTK 500

Query: 1860 WRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXXXXXXXXXXKINQE 1684
            WRVNK++LSV+ESIW +GGN+AGLV+R DV IPE  LS+D               KINQE
Sbjct: 501  WRVNKQVLSVLESIWVSGGNIAGLVDRNDVLIPEKPLSEDMTEVQKWKWSVRKAKKINQE 560

Query: 1683 RHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEG 1504
            RHSQRCDTELKLSVAR+MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD+CRG+LEFAEG
Sbjct: 561  RHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEG 620

Query: 1503 RPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAE 1324
            RPLGKSGLRWLKIHLANL+ GGVEKLS+DGR++FVEN++ EIFDSA+N +NG+RWWL AE
Sbjct: 621  RPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRWWLTAE 680

Query: 1323 DPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAG 1144
            DPFQCLAACINL+EAL+SSSPH+V+SHLPIHQDGSCNGLQHYAALGR++ EAAAVNL+AG
Sbjct: 681  DPFQCLAACINLAEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAAAVNLVAG 740

Query: 1143 DKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTY 964
            +KPADVYSEIA RVH IMKRDS KD +  P ALLAK+LI QVDRKLVKQTVMTSVYGVT+
Sbjct: 741  EKPADVYSEIAVRVHEIMKRDSNKDHSKHPQALLAKILIDQVDRKLVKQTVMTSVYGVTF 800

Query: 963  VGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIA 784
            VGAREQIKRRLEEKG ITDDR LF+AACYAAKVTL ALGE+F+AAR+IMGWLGDCAK+IA
Sbjct: 801  VGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLGDCAKVIA 860

Query: 783  SENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHS 604
            SENQPVRWTTPLGLPVVQPY K +RH+IRTSLQVLALQREG+ VE+RKQRTAFPPNFVHS
Sbjct: 861  SENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGNLVEIRKQRTAFPPNFVHS 920

Query: 603  LDGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLES 424
            LDGSHMMMTA+ACRDAGL FAGVHDSFWTHACDVD MNQILR+KFV+LYNMP+LE+LLES
Sbjct: 921  LDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPMLENLLES 980

Query: 423  FETSYPTLTFPALPNRGDFDLNKVVQ 346
            F+TSYPTL+FP+LP RG+FDL +V++
Sbjct: 981  FQTSYPTLSFPSLPERGNFDLEEVLE 1006


>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
            sativus]
          Length = 975

 Score = 1299 bits (3362), Expect = 0.0
 Identities = 636/864 (73%), Positives = 739/864 (85%)
 Frame = -1

Query: 2937 PWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXXX 2758
            PWI+SLF+K L    +    VK+EF E+E+RKY LLRRRQIKAETEAW            
Sbjct: 110  PWIASLFLKGLYKCVQKE--VKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELER 167

Query: 2757 XXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAVI 2578
                +KLAPNLP+VKKL LGWFEPL+ AIE+EQ  QRSKK KAAFAP+++ L ADKMAVI
Sbjct: 168  EMCEKKLAPNLPYVKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVI 227

Query: 2577 VMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQED 2398
            VM+K+MGLLMM   +D CV+VV+AAVQIG AIE EVRI S LE+ + +QR +V A++ E 
Sbjct: 228  VMYKMMGLLMMAA-QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADT-EC 285

Query: 2397 SIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQP 2218
              KE  +LRK+V  LI+R ++ EVQKL++ EEFK+WGRDTQAKLG  LI+LL +SA++QP
Sbjct: 286  LTKEKEVLRKQVNGLIRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQP 345

Query: 2217 PVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPYV 2038
            PV+QSADSPPD+RPAF H FK   +  GQ+ VKKYGV+ECDP+VLAGLD+T KHM+IPY+
Sbjct: 346  PVSQSADSPPDIRPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYI 405

Query: 2037 PMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTKW 1858
            PMLVPPKKW+GYDKGG+ FLPSY+MRTHGS +QQDA+K +  KQMQKV+EALD LG+TKW
Sbjct: 406  PMLVPPKKWKGYDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKW 465

Query: 1857 RVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXXXXXXXXXKINQERH 1678
            RVN+ +LSVVES+WA GGN AGLV+R+DVPIPE    D               KINQE H
Sbjct: 466  RVNRSVLSVVESLWAQGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELH 525

Query: 1677 SQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRP 1498
            SQRCD ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRP
Sbjct: 526  SQRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRP 585

Query: 1497 LGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAEDP 1318
            LGKSGL WLKIHLANLY GGVEKLSYD R++FV++++  IFDSA N +NG+RWWL AEDP
Sbjct: 586  LGKSGLHWLKIHLANLYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDP 645

Query: 1317 FQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGDK 1138
            FQCLAAC+NLSEAL+SS+PHTV+S+LPIHQDGSCNGLQHYAALGRD+ EAAAVNL+AG+K
Sbjct: 646  FQCLAACMNLSEALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEK 705

Query: 1137 PADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYVG 958
            PADVYSEIA RVH IM RD+ KDP T+P+A LAKLLI QVDRKLVKQTVMTSVYGVTY+G
Sbjct: 706  PADVYSEIAARVHTIMIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIG 765

Query: 957  AREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIASE 778
            AREQIKRRLEEKGLI+DDRL F A+CYAAKVTL+ALGE+F+AAR IMGWLGDCAK+IA +
Sbjct: 766  AREQIKRRLEEKGLISDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKD 825

Query: 777  NQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLD 598
            NQPVRWTTPLGLPVVQPY+K++RH+IRTSLQVLALQREG+ V+VRKQRTAFPPNFVHSLD
Sbjct: 826  NQPVRWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGNLVDVRKQRTAFPPNFVHSLD 885

Query: 597  GSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLESFE 418
            GSHMM+TA+ACRDAGLRFAGVHDSFWTHACDVDRMN ILR+KFV+LY+MP+LESLLE FE
Sbjct: 886  GSHMMLTALACRDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFE 945

Query: 417  TSYPTLTFPALPNRGDFDLNKVVQ 346
            T+YP LTFP+LP RGDFDL +V++
Sbjct: 946  TTYPGLTFPSLPGRGDFDLQEVLK 969


>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
            sativus]
          Length = 975

 Score = 1296 bits (3355), Expect = 0.0
 Identities = 635/864 (73%), Positives = 738/864 (85%)
 Frame = -1

Query: 2937 PWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXXX 2758
            PWI+SLF+K L    +    VK+EF E+E+RKY LLRRRQIKAETEAW            
Sbjct: 110  PWIASLFLKGLYKCVQKE--VKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELER 167

Query: 2757 XXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAVI 2578
                +KLAPNLP+VKKL LGWFEPL+ AIE+EQ  QRSKK KAAFAP+++ L ADKMA I
Sbjct: 168  EMCEKKLAPNLPYVKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAGI 227

Query: 2577 VMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQED 2398
            VM+K+MGLLMM   +D CV+VV+AAVQIG AIE EVRI S LE+ + +QR +V A++ E 
Sbjct: 228  VMYKMMGLLMMAA-QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADT-EC 285

Query: 2397 SIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQP 2218
              KE  +LRK+V  LI+R ++ EVQKL++ EEFK+WGRDTQAKLG  LI+LL +SA++QP
Sbjct: 286  LTKEKEVLRKQVNGLIRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQP 345

Query: 2217 PVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPYV 2038
            PV+QSADSPPD+RPAF H FK   +  GQ+ VKKYGV+ECDP+VLAGLD+T KHM+IPY+
Sbjct: 346  PVSQSADSPPDIRPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYI 405

Query: 2037 PMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTKW 1858
            PMLVPPKKW+GYDKGG+ FLPSY+MRTHGS +QQDA+K +  KQMQKV+EALD LG+TKW
Sbjct: 406  PMLVPPKKWKGYDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKW 465

Query: 1857 RVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXXXXXXXXXKINQERH 1678
            RVN+ +LSVVES+WA GGN AGLV+R+DVPIPE    D               KINQE H
Sbjct: 466  RVNRSVLSVVESLWAQGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELH 525

Query: 1677 SQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRP 1498
            SQRCD ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRP
Sbjct: 526  SQRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRP 585

Query: 1497 LGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAEDP 1318
            LGKSGL WLKIHLANLY GGVEKLSYD R++FV++++  IFDSA N +NG+RWWL AEDP
Sbjct: 586  LGKSGLHWLKIHLANLYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDP 645

Query: 1317 FQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGDK 1138
            FQCLAAC+NLSEAL+SS+PHTV+S+LPIHQDGSCNGLQHYAALGRD+ EAAAVNL+AG+K
Sbjct: 646  FQCLAACMNLSEALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEK 705

Query: 1137 PADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYVG 958
            PADVYSEIA RVH IM RD+ KDP T+P+A LAKLLI QVDRKLVKQTVMTSVYGVTY+G
Sbjct: 706  PADVYSEIAARVHTIMIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIG 765

Query: 957  AREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIASE 778
            AREQIKRRLEEKGLI+DDRL F A+CYAAKVTL+ALGE+F+AAR IMGWLGDCAK+IA +
Sbjct: 766  AREQIKRRLEEKGLISDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKD 825

Query: 777  NQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLD 598
            NQPVRWTTPLGLPVVQPY+K++RH+IRTSLQVLALQREG+ V+VRKQRTAFPPNFVHSLD
Sbjct: 826  NQPVRWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGNLVDVRKQRTAFPPNFVHSLD 885

Query: 597  GSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLESFE 418
            GSHMM+TA+ACRDAGLRFAGVHDSFWTHACDVDRMN ILR+KFV+LY+MP+LESLLE FE
Sbjct: 886  GSHMMLTALACRDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFE 945

Query: 417  TSYPTLTFPALPNRGDFDLNKVVQ 346
            T+YP LTFP+LP RGDFDL +V++
Sbjct: 946  TTYPGLTFPSLPGRGDFDLQEVLK 969


>emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]
          Length = 989

 Score = 1268 bits (3280), Expect = 0.0
 Identities = 611/865 (70%), Positives = 734/865 (84%), Gaps = 1/865 (0%)
 Frame = -1

Query: 2937 PWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXXX 2758
            PW+++LFMK L+    + +G+++EFKE+ER KY LLRRRQIKAETEAW            
Sbjct: 125  PWVNTLFMKGLV---DSNTGLRLEFKEIEREKYNLLRRRQIKAETEAWESMVEEYREFVR 181

Query: 2757 XXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAVI 2578
                +KLAPNLP VK L LGWFEPL++AIEKEQ  QRS+K KA +  ++D LPADKMAVI
Sbjct: 182  EMRDKKLAPNLPQVKALFLGWFEPLKKAIEKEQKSQRSRKQKAIYGYHIDMLPADKMAVI 241

Query: 2577 VMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQED 2398
            VMHK+M LLM+G  +  CVR+V+AA+QIG AIE E++IHSFLE+TK  ++    ++  ED
Sbjct: 242  VMHKMMSLLMVGN-DAGCVRLVQAALQIGTAIEQEIKIHSFLEKTKNIRKN--ASDLPED 298

Query: 2397 SIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQP 2218
             +KE  I R RVKSLIKR R+ E  KLV SE+ KSW +DTQAKLG  LI+LL  +AY+Q 
Sbjct: 299  LLKEKEIQRNRVKSLIKRKRLFEAAKLVTSEDSKSWSQDTQAKLGSRLIELLIDTAYIQH 358

Query: 2217 PVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPYV 2038
            P +QSAD+PPDVRPAFRH FKI   E GQ +VK+YGVIECDPLVL G+D++ ++MIIPYV
Sbjct: 359  PTSQSADTPPDVRPAFRHKFKILNNELGQQVVKRYGVIECDPLVLKGIDRSARYMIIPYV 418

Query: 2037 PMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTKW 1858
            PML+PPK W+GYDKGGYLFLPSY+MRTHGSR+QQDA++  P +QMQKV+EAL+TLG+TKW
Sbjct: 419  PMLIPPKNWKGYDKGGYLFLPSYVMRTHGSRKQQDAMRKTPPQQMQKVFEALNTLGHTKW 478

Query: 1857 RVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXXXXXXXXXXKINQER 1681
            R+N+++L VVE++WA+GGN+ GLVN +DVP+PE  L++D               KIN+ER
Sbjct: 479  RINRKVLGVVENLWASGGNIGGLVNCDDVPLPEKPLTEDPAEIDTWKWSVRKAKKINRER 538

Query: 1680 HSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGR 1501
            H+ RCD ELK+SVA+KMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA GR
Sbjct: 539  HALRCDVELKISVAQKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFASGR 598

Query: 1500 PLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAED 1321
            PLGK+GL WLKIHLAN+Y GGV+KLSY+ R +FVEN++ E+FDSA N +NGNRWWL AED
Sbjct: 599  PLGKTGLHWLKIHLANVYAGGVDKLSYEARAAFVENHLEEVFDSATNPINGNRWWLSAED 658

Query: 1320 PFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGD 1141
            PFQCLAACI+L+ AL SSSPH+ +S+LPIHQDGSCNGLQHYAALGRDS EAAAVNL+AG+
Sbjct: 659  PFQCLAACIDLTGALNSSSPHSFISYLPIHQDGSCNGLQHYAALGRDSKEAAAVNLVAGE 718

Query: 1140 KPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYV 961
            +PADVYSEIA RV  IM++DS KDP TDP A+LAK+L+ QVDRKLVKQTVMTSVYGVT+V
Sbjct: 719  EPADVYSEIAVRVREIMEKDSRKDPKTDPHAVLAKVLVDQVDRKLVKQTVMTSVYGVTFV 778

Query: 960  GAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIAS 781
            GAREQIKRRLEEKG+ITDDRLLFSAACY+AKVT++ALG+LFQAAR IM WLGDCAK+IAS
Sbjct: 779  GAREQIKRRLEEKGVITDDRLLFSAACYSAKVTMSALGQLFQAARGIMDWLGDCAKVIAS 838

Query: 780  ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSL 601
            ENQPVRWTTPLGLPVVQPY K++RH+I+TSLQVLALQ+EG+ +EV+KQRTAFPPN+VHSL
Sbjct: 839  ENQPVRWTTPLGLPVVQPYCKSKRHLIKTSLQVLALQQEGEGIEVKKQRTAFPPNYVHSL 898

Query: 600  DGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLESF 421
            DG+HMMMTA+ACRDAGL+FAGVHDSFWTHACDV++MNQILR KFV+LYNMPILE+LLESF
Sbjct: 899  DGTHMMMTAVACRDAGLQFAGVHDSFWTHACDVEKMNQILRVKFVELYNMPILENLLESF 958

Query: 420  ETSYPTLTFPALPNRGDFDLNKVVQ 346
            +T+YP  TFP LP RGDFDL +V++
Sbjct: 959  QTAYPASTFPPLPERGDFDLEEVLE 983


>ref|XP_006453567.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
            gi|557556793|gb|ESR66807.1| hypothetical protein
            CICLE_v10007333mg [Citrus clementina]
          Length = 986

 Score = 1247 bits (3227), Expect = 0.0
 Identities = 615/866 (71%), Positives = 722/866 (83%), Gaps = 2/866 (0%)
 Frame = -1

Query: 2937 PWISSLFMKSLLFRGRNRSGVKI-EFKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXX 2761
            PW SS+F+K L  R      +K+ E++EM++RK+ LLRRRQ+K ETEAW           
Sbjct: 148  PWFSSIFLKGLYKR------IKLQEYREMKKRKFNLLRRRQVKQETEAWERMVDEYKELE 201

Query: 2760 XXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAV 2581
                 ++LAPNLPH+K L LGWF PL EAIE+EQ +QR+KK KAA+AP+++ LPADKMAV
Sbjct: 202  AKMIEKRLAPNLPHIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIELLPADKMAV 261

Query: 2580 IVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQE 2401
            IVMHK+MGL+M  G EDRCV+VV+AAV IG+AIE E+RIHSFLE+TK ++R ++ A+++E
Sbjct: 262  IVMHKMMGLVM-AGHEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKIIADTEE 320

Query: 2400 DSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQ 2221
               KE  +LRKRV SLIK  RV+E QKL+++EE K WGRDTQAKLG  L++LL ++AYVQ
Sbjct: 321  VLSKEKELLRKRVNSLIKSKRVMEAQKLLKNEETKPWGRDTQAKLGSRLVELLIETAYVQ 380

Query: 2220 PPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPY 2041
             PVN +  SPPDVRPAFRH FK   +  GQ   K+YGV+ECDPLVL GLD++ KHM+IPY
Sbjct: 381  HPVNPADYSPPDVRPAFRHRFKTILKHPGQKTTKRYGVVECDPLVLEGLDRSAKHMLIPY 440

Query: 2040 VPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTK 1861
            VPMLVPPKKW+GY+KGGYLFLPSY+MRTHGSR+QQ+A+K+V    M+KV+EALDTLG+TK
Sbjct: 441  VPMLVPPKKWKGYNKGGYLFLPSYVMRTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTK 500

Query: 1860 WRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXXXXXXXXXXKINQE 1684
            WRVNK++LSV+ESIW +GGN+AGLV+R DV IPE  LS+D               KINQE
Sbjct: 501  WRVNKQVLSVLESIWVSGGNIAGLVDRNDVLIPEKPLSEDMTEVQKWKWSVRKAKKINQE 560

Query: 1683 RHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEG 1504
            RHSQRCDTELKLSVAR+MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD+CRG+LEFAEG
Sbjct: 561  RHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEG 620

Query: 1503 RPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAE 1324
            RPLGKSGLRWLKIHLANL+                          ++N +NG+RWWL AE
Sbjct: 621  RPLGKSGLRWLKIHLANLF--------------------------SENPINGSRWWLTAE 654

Query: 1323 DPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAG 1144
            DPFQCLAACINL+EAL+SSSPH+V+SHLPIHQDGSCNGLQHYAALGR++ EAAAVNL+AG
Sbjct: 655  DPFQCLAACINLAEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAAAVNLVAG 714

Query: 1143 DKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTY 964
            +KPADVYSEIA RVH IMKRDS KD +  P ALLAK+LI QVDRKLVKQTVMTSVYGVT+
Sbjct: 715  EKPADVYSEIAVRVHEIMKRDSNKDHSKHPQALLAKILIDQVDRKLVKQTVMTSVYGVTF 774

Query: 963  VGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIA 784
            VGAREQIKRRLEEKG ITDDR LF+AACYAAKVTL ALGE+F+AAR+IMGWLGDCAK+IA
Sbjct: 775  VGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLGDCAKVIA 834

Query: 783  SENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHS 604
            SENQPVRWTTPLGLPVVQPY K +RH+IRTSLQVLALQREG+ VE+RKQRTAFPPNFVHS
Sbjct: 835  SENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGNLVEIRKQRTAFPPNFVHS 894

Query: 603  LDGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLES 424
            LDGSHMMMTA+ACRDAGL FAGVHDSFWTHACDVD MNQILR+KFV+LYNMP+LE+LLES
Sbjct: 895  LDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPMLENLLES 954

Query: 423  FETSYPTLTFPALPNRGDFDLNKVVQ 346
            F+TSYPTL+FP+LP RG+FDL +V++
Sbjct: 955  FQTSYPTLSFPSLPERGNFDLEEVLE 980


>ref|XP_006404912.1| hypothetical protein EUTSA_v10000030mg [Eutrema salsugineum]
            gi|557106040|gb|ESQ46365.1| hypothetical protein
            EUTSA_v10000030mg [Eutrema salsugineum]
          Length = 993

 Score = 1246 bits (3224), Expect = 0.0
 Identities = 606/867 (69%), Positives = 728/867 (83%), Gaps = 3/867 (0%)
 Frame = -1

Query: 2937 PWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXXX 2758
            PWIS+LF+K L         VKIE K++++RK+  LRRRQ+K ETEAW            
Sbjct: 129  PWISALFLKGL--SKMVDQTVKIERKDIDKRKFDSLRRRQVKEETEAWEKMVDEYRDLEK 186

Query: 2757 XXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQR--SKKNKAAFAPYVDALPADKMA 2584
                + LAPNLP+VK + LGWF+PL++ IE+EQ +Q+  SKK +AA+AP+++ LPADKMA
Sbjct: 187  EMCEKNLAPNLPYVKHMFLGWFQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMA 246

Query: 2583 VIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQ 2404
            VIVMHK+MGL+M  G ED C++VV+AAV IG+AIE EVRIH+FL+RT+K+      A   
Sbjct: 247  VIVMHKMMGLVM-SGHEDGCIQVVQAAVSIGIAIEQEVRIHNFLKRTRKNN-----AGDS 300

Query: 2403 EDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYV 2224
            E+ +K+  +LRKRV SLI+R R+I+  K+V+SE  K WGR TQAKLG  L++LL ++AYV
Sbjct: 301  EEELKDKQLLRKRVNSLIRRKRIIDALKVVKSEGIKPWGRATQAKLGSRLLELLIETAYV 360

Query: 2223 QPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIP 2044
            QPP+ Q+ D+ P+ RPAFRH FK  T+  G  LV++YGVIECD L+LAGLDK+ KHM+IP
Sbjct: 361  QPPLTQAGDTIPEFRPAFRHKFKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIP 420

Query: 2043 YVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNT 1864
            YVPMLVPPK+W+GYDKGGYLFLPSY+MRTHGS++QQDA++ + +K   +V+EALDTLGNT
Sbjct: 421  YVPMLVPPKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALRDISSKTAHRVFEALDTLGNT 480

Query: 1863 KWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXXXXXXXXXXKINQ 1687
            KWRVN++IL VVE +WA GGN+AGLVNREDVPIPE   S+D               KIN+
Sbjct: 481  KWRVNRKILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEEIQSWKWSVRKANKINR 540

Query: 1686 ERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAE 1507
            ERHS RCD ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG LEFAE
Sbjct: 541  ERHSLRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAE 600

Query: 1506 GRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKA 1327
            GRPLGKSGL WLKIHLANLY GGVEKLS+DGR++FVEN++  I DSA+N ++G RWWLKA
Sbjct: 601  GRPLGKSGLYWLKIHLANLYAGGVEKLSHDGRLAFVENHLDNIMDSAENPIHGQRWWLKA 660

Query: 1326 EDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIA 1147
            EDPFQCLAAC+ L++AL+S SP++V+SHLPIHQDGSCNGLQHYAALGRDSFEAAAVNL+A
Sbjct: 661  EDPFQCLAACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVA 720

Query: 1146 GDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVT 967
            G+KPADVYSEI+ RVH IMK+DS KDP ++P+A LAK+LI QVDRKLVKQTVMTSVYGVT
Sbjct: 721  GEKPADVYSEISLRVHEIMKKDSSKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVT 780

Query: 966  YVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKII 787
            YVGAREQIKRRLEEKG+I+D+R+LFSAACYAAKVTLAALGE+F+AARAIM WLGDCAKII
Sbjct: 781  YVGAREQIKRRLEEKGVISDERMLFSAACYAAKVTLAALGEIFEAARAIMSWLGDCAKII 840

Query: 786  ASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVH 607
            AS+N PVRW TPLGLPVVQPY +++RH+IRTSLQVLALQREG++V+VRKQRTAFPPNFVH
Sbjct: 841  ASDNHPVRWITPLGLPVVQPYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVH 900

Query: 606  SLDGSHMMMTAIACRDAGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLE 427
            SLDG+HMMMTA+ACR+AGL FAGVHDS+WTHACDVD MN+ILR+KFV+LYN PILE LL+
Sbjct: 901  SLDGTHMMMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQ 960

Query: 426  SFETSYPTLTFPALPNRGDFDLNKVVQ 346
            SF+ SYP L FP +P RGDFDL +V++
Sbjct: 961  SFQESYPNLVFPPVPKRGDFDLKEVLK 987