BLASTX nr result
ID: Rehmannia22_contig00009864
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00009864
(1839 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS64394.1| hypothetical protein M569_10384, partial [Genlise... 914 0.0
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei... 907 0.0
gb|EOY19724.1| U5 small nuclear ribonucleoprotein helicase, puta... 904 0.0
ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotei... 902 0.0
ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotei... 901 0.0
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 847 0.0
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei... 847 0.0
ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotei... 844 0.0
ref|XP_006428572.1| hypothetical protein CICLE_v100108901mg, par... 844 0.0
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei... 830 0.0
ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotei... 823 0.0
gb|EMJ09609.1| hypothetical protein PRUPE_ppa000042mg [Prunus pe... 822 0.0
gb|ESW21254.1| hypothetical protein PHAVU_005G055300g [Phaseolus... 820 0.0
ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase ... 808 0.0
ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotei... 805 0.0
ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata] g... 795 0.0
ref|XP_006416344.1| hypothetical protein EUTSA_v10006525mg [Eutr... 792 0.0
ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein hel... 791 0.0
ref|XP_006306573.1| hypothetical protein CARUB_v10008066mg [Caps... 790 0.0
ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h... 788 0.0
>gb|EPS64394.1| hypothetical protein M569_10384, partial [Genlisea aurea]
Length = 977
Score = 914 bits (2362), Expect = 0.0
Identities = 475/613 (77%), Positives = 509/613 (83%), Gaps = 1/613 (0%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITD-YQXXXXXXXXXXXX 1661
DEILAVLKN+ +KNPDKKKEIEKLLNPIPG FDQLVSIGRLITD Y+
Sbjct: 162 DEILAVLKNENLKNPDKKKEIEKLLNPIPGSMFDQLVSIGRLITDYYEGGDLDDAAVNGA 221
Query: 1660 XXXXXXXXXXXVXXXXXXXXXXESXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDDEQ 1481
+ SGAMQMGG DDDD++
Sbjct: 222 DGLDDDVGVAVEFEENEEEEEESDLDMVPEDEDEDDDDVAEIERSGAMQMGGANDDDDDR 281
Query: 1480 EANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKLLV 1301
EAN GMTLNVQDIDAYWLQRKISQAY+QKIDPQQSQKLAEEVLKILAEGDDREVE LLV
Sbjct: 282 EANGGMTLNVQDIDAYWLQRKISQAYEQKIDPQQSQKLAEEVLKILAEGDDREVENNLLV 341
Query: 1300 HLQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHATR 1121
HLQFDKFSLIK+L++NRLKVVWCTRLARA EM GLG DHAAILEQLHATR
Sbjct: 342 HLQFDKFSLIKFLMKNRLKVVWCTRLARAEDQEKRKEIEDEMNGLGSDHAAILEQLHATR 401
Query: 1120 ATAKERQKIVAKNIREEARRLKDETGGDGDRERHQLVDRDADGGWLKGQRQLLDLDSLAF 941
A+AKERQK + K+IR+EARRLKDET GDGDR+ QLVDRDADGGWLKGQRQ+LDLD+LAF
Sbjct: 402 ASAKERQKNLEKSIRDEARRLKDETVGDGDRDLRQLVDRDADGGWLKGQRQVLDLDNLAF 461
Query: 940 HQGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKISDMPDWAQPAFR 761
HQGGL MANKKCELPVGSYRNH+KGYEEVHVPALKP+PL+AGE+LVKIS+MPDWAQPAF
Sbjct: 462 HQGGLLMANKKCELPVGSYRNHKKGYEEVHVPALKPLPLSAGEKLVKISEMPDWAQPAFE 521
Query: 760 GMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHSNY 581
M LNRVQSKVYETALFSA NILLCAPTGAGKTNVAMLTILQQIALN NEDG+INH NY
Sbjct: 522 NMVSLNRVQSKVYETALFSAENILLCAPTGAGKTNVAMLTILQQIALNRNEDGTINHDNY 581
Query: 580 KIVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKWDII 401
KI+YVAPMKALVAEVVGNLSNRL+HYGV+VKELSGDQ+LTRQQI+ETQIIVTTPEKWDII
Sbjct: 582 KIIYVAPMKALVAEVVGNLSNRLQHYGVRVKELSGDQSLTRQQIDETQIIVTTPEKWDII 641
Query: 400 TRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSATLP 221
TRKSGDRTYTQLVK DNRGPVLESI+ARTVRQIETTK+HIRLVGLSATLP
Sbjct: 642 TRKSGDRTYTQLVKLIIIDEIHLLHDNRGPVLESIVARTVRQIETTKDHIRLVGLSATLP 701
Query: 220 NYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVISV 41
N+EDVA+ LRV L +KGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVIS+
Sbjct: 702 NFEDVAIFLRVKL-DKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVISI 760
Query: 40 AGKHQVLIFVHSR 2
AGKHQVLIFVHSR
Sbjct: 761 AGKHQVLIFVHSR 773
>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
vinifera]
Length = 2177
Score = 907 bits (2344), Expect = 0.0
Identities = 477/613 (77%), Positives = 505/613 (82%), Gaps = 1/613 (0%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDYQXXXXXXXXXXXXX 1658
DEILAVLKN+T+KNPDKKKEIE+LLNPIP FDQLVSIGRLITD+Q
Sbjct: 148 DEILAVLKNETVKNPDKKKEIERLLNPIPNHIFDQLVSIGRLITDFQDGGDAAGPTAANG 207
Query: 1657 XXXXXXXXXXVXXXXXXXXXXE-SXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDDEQ 1481
E S +GSGAMQMGGGIDDDD Q
Sbjct: 208 DDALDDDVGVAVEFEENEDEEEESDLDMVQEDEEEDDDVMEQNGSGAMQMGGGIDDDDMQ 267
Query: 1480 EANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKLLV 1301
EANEGMTLNVQDIDAYWLQRKISQAY+Q+IDPQQ QKLAEEVLKILAEGDDREVETKLLV
Sbjct: 268 EANEGMTLNVQDIDAYWLQRKISQAYEQQIDPQQCQKLAEEVLKILAEGDDREVETKLLV 327
Query: 1300 HLQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHATR 1121
HLQFDKFSLIK+LLRNRLK+VWCTRLARA EM G G D AAILEQLHATR
Sbjct: 328 HLQFDKFSLIKFLLRNRLKIVWCTRLARAEDQEERKKIEEEMTGSGSDLAAILEQLHATR 387
Query: 1120 ATAKERQKIVAKNIREEARRLKDETGGDGDRERHQLVDRDADGGWLKGQRQLLDLDSLAF 941
ATAKERQKI+ K+IREEARRLKDE+GGDGDR+R VDRDA+ GWLKGQRQLLDLD +AF
Sbjct: 388 ATAKERQKILEKSIREEARRLKDESGGDGDRDRRGPVDRDAESGWLKGQRQLLDLDGIAF 447
Query: 940 HQGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKISDMPDWAQPAFR 761
HQGG MANKKCELP GSYR+H KGYEEVHVPALK L GE+LVKIS MPDWAQPAF+
Sbjct: 448 HQGGFLMANKKCELPTGSYRHHSKGYEEVHVPALKAAALGPGEELVKISAMPDWAQPAFK 507
Query: 760 GMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHSNY 581
GM+QLNRVQSKVYETALF+A N+LLCAPTGAGKTNVAMLTILQQIALN N DGS NHSNY
Sbjct: 508 GMTQLNRVQSKVYETALFTAENVLLCAPTGAGKTNVAMLTILQQIALNRNADGSFNHSNY 567
Query: 580 KIVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKWDII 401
KIVYVAPMKALVAEVVGNLSNRL+HY VKVKELSGDQ+LTRQQIEETQIIVTTPEKWDII
Sbjct: 568 KIVYVAPMKALVAEVVGNLSNRLQHYDVKVKELSGDQSLTRQQIEETQIIVTTPEKWDII 627
Query: 400 TRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSATLP 221
TRKSGDRTYTQLVK DNRGPVLESI+ARTVRQIETTKEHIRLVGLSATLP
Sbjct: 628 TRKSGDRTYTQLVKLLIVDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSATLP 687
Query: 220 NYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVISV 41
NYEDVA+ LRV+LK KGLFHFDNSYRP PLAQQYIGITVKKPLQRFQLMNDVCYEKV++V
Sbjct: 688 NYEDVALFLRVDLK-KGLFHFDNSYRPCPLAQQYIGITVKKPLQRFQLMNDVCYEKVMAV 746
Query: 40 AGKHQVLIFVHSR 2
AGKHQVLIFVHSR
Sbjct: 747 AGKHQVLIFVHSR 759
Score = 112 bits (279), Expect = 7e-22
Identities = 84/279 (30%), Positives = 140/279 (50%), Gaps = 9/279 (3%)
Frame = -3
Query: 811 QLVKISDMPDWA--QPAFRGMSQ----LNRVQSKVYETALFSAVNILLCAPTGAGKTNVA 650
+L+ + +P A P++ + Q N +Q++V+ + N+L+ APTG+GKT A
Sbjct: 1331 ELLDLQPLPVTALRNPSYEALYQEFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICA 1390
Query: 649 MLTILQQIALNMNEDGSINHSNYKIVYVAPMKALVAEVVGNLSNRLEH-YGVKVKELSGD 473
IL+ ++ GS S + VY+AP++AL E + + G++V EL+G+
Sbjct: 1391 EFAILRN-----HQKGS--ESIVRAVYIAPIEALAKERYRDWERKFGRGLGMRVVELTGE 1443
Query: 472 QTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESII 293
+ +E Q+I++TPEKWD ++R+ R + Q V GPVLE I+
Sbjct: 1444 TATDLKLLERGQVIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIV 1503
Query: 292 ARTVRQIETTKEH-IRLVGLSATLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYI 116
+R +R I + E+ IR+V LS +L N +D+ + GLF+F RPVPL
Sbjct: 1504 SR-MRYIASQGENKIRIVALSTSLANAKDLGEW--IGATSHGLFNFPPGVRPVPLEIHIQ 1560
Query: 115 GITVKKPLQRFQLMNDVCYEKVISVA-GKHQVLIFVHSR 2
G+ + R Q M Y ++ A + ++FV +R
Sbjct: 1561 GVDIANFEARMQAMTKPTYTAIVQHAKNRKPAIVFVPTR 1599
>gb|EOY19724.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao]
Length = 2176
Score = 904 bits (2337), Expect = 0.0
Identities = 474/612 (77%), Positives = 506/612 (82%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDYQXXXXXXXXXXXXX 1658
DEILAVLKN+ IKNPDKKKEIEKLLNPIP FDQLVSIG+LITDYQ
Sbjct: 146 DEILAVLKNEGIKNPDKKKEIEKLLNPIPSQVFDQLVSIGKLITDYQDGGEGGGGSMGNG 205
Query: 1657 XXXXXXXXXXVXXXXXXXXXXESXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDDEQE 1478
E +G+GAMQMGGGIDDDD E
Sbjct: 206 DDGLDDDVGVAVEFEENEDEEEESDLDMVQEDEDDDDDGVENGAGAMQMGGGIDDDDMHE 265
Query: 1477 ANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKLLVH 1298
ANEGM+LNVQDIDAYWLQRKISQAYDQ+IDPQQ QKLAEEVLKILAEGDDREVETKLLVH
Sbjct: 266 ANEGMSLNVQDIDAYWLQRKISQAYDQQIDPQQCQKLAEEVLKILAEGDDREVETKLLVH 325
Query: 1297 LQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHATRA 1118
LQFDKFSLIKYLLRNRLKVVWCTRLARA EMM LGPD AAILEQLHATRA
Sbjct: 326 LQFDKFSLIKYLLRNRLKVVWCTRLARAEDQEERKKIEEEMMSLGPDLAAILEQLHATRA 385
Query: 1117 TAKERQKIVAKNIREEARRLKDETGGDGDRERHQLVDRDADGGWLKGQRQLLDLDSLAFH 938
TAKERQK + K+IREEARRLKDE+ GDGDR+R L DRD DGGWLKGQRQLLDLDSLAF
Sbjct: 386 TAKERQKNLEKSIREEARRLKDESVGDGDRDRRGLADRDTDGGWLKGQRQLLDLDSLAFE 445
Query: 937 QGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKISDMPDWAQPAFRG 758
QGGL MANKKCELP+GSY++H KGYEEVHVPA K PL + E+LVKIS+MP+WAQPAF+G
Sbjct: 446 QGGLLMANKKCELPMGSYKHHAKGYEEVHVPAPKSKPLESDERLVKISEMPEWAQPAFKG 505
Query: 757 MSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHSNYK 578
M QLNRVQSKVYETALF+A NILLCAPTGAGKTNVA+LTILQQ+ALNM+ DGSINHSNYK
Sbjct: 506 MQQLNRVQSKVYETALFAADNILLCAPTGAGKTNVAVLTILQQLALNMDSDGSINHSNYK 565
Query: 577 IVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKWDIIT 398
IVYVAPMKALVAEVVGNLS+RLE YGV V+ELSGDQTLTRQQI+ETQIIVTTPEKWDIIT
Sbjct: 566 IVYVAPMKALVAEVVGNLSHRLEAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKWDIIT 625
Query: 397 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSATLPN 218
RKSGDRTYTQLVK DNRGPVLESI+ARTVRQIETTKEHIRLVGLSATLPN
Sbjct: 626 RKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSATLPN 685
Query: 217 YEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVISVA 38
YEDVA+ LRV+LKE GLFHFDNSYRPVPL+QQYIGITVKKPLQRFQLMND+CYEKV++VA
Sbjct: 686 YEDVALFLRVDLKE-GLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKVMAVA 744
Query: 37 GKHQVLIFVHSR 2
GKHQVLIFVHSR
Sbjct: 745 GKHQVLIFVHSR 756
Score = 115 bits (287), Expect = 8e-23
Identities = 84/283 (29%), Positives = 139/283 (49%), Gaps = 3/283 (1%)
Frame = -3
Query: 841 LKPMPLAAGEQLVKISDMPDWAQPAFRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGK 662
L+P+P+ A P + + ++ N VQ++V+ + N+L+ APTG+GK
Sbjct: 1332 LQPLPVTALRN-------PSY-EALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGK 1383
Query: 661 TNVAMLTILQQIALNMNEDGSINHSNYKIVYVAPMKALVAEVVGNLSNRLEH-YGVKVKE 485
T A IL+ ++ G S ++VY+AP++A+ E + + G++V E
Sbjct: 1384 TICAEFAILRN-----HQKGP--DSIMRVVYIAPLEAIAKERYRDWEKKFGRGLGMRVVE 1436
Query: 484 LSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVL 305
L+G+ ++ + +E+ QI+++TPEKWD ++R+ R Y Q V GPVL
Sbjct: 1437 LTGETSMDLKLLEKGQIVISTPEKWDALSRRWKQRKYVQQVSVFIVDELHLIGGQGGPVL 1496
Query: 304 ESIIARTVRQIETTKEHIRLVGLSATLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQ 125
E I++R + IR+V LS +L N +D+ + GLF+F RPVPL
Sbjct: 1497 EVIVSRMRYIASQVENKIRIVALSTSLANAKDLGEW--IGATSHGLFNFPPGVRPVPLEI 1554
Query: 124 QYIGITVKKPLQRFQLMNDVCYEKVISVA--GKHQVLIFVHSR 2
G+ + R Q M Y V+ A GK ++FV +R
Sbjct: 1555 HIQGVDIANFEARMQAMTKPTYTAVVQHAKNGK-PAIVFVPTR 1596
>ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Solanum lycopersicum]
Length = 2174
Score = 902 bits (2332), Expect = 0.0
Identities = 480/614 (78%), Positives = 501/614 (81%), Gaps = 2/614 (0%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDYQXXXXXXXXXXXXX 1658
DE+LAVLKND KNP+KKKEIEKLLNPI FDQLVSIGRLITDYQ
Sbjct: 145 DEMLAVLKNDNFKNPEKKKEIEKLLNPISNQVFDQLVSIGRLITDYQDGGDASVSAAADG 204
Query: 1657 XXXXXXXXXXVXXXXXXXXXXE-SXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDDEQ 1481
E S SGAMQMG GIDDD+ +
Sbjct: 205 DDGLDDDVGVAVEFEENEEEEEESDLDVVPDDEEEDDDVMEASASGAMQMGSGIDDDEMR 264
Query: 1480 EANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKLLV 1301
EA+EGMTLNVQDIDAYWLQRKISQAY+Q+IDPQQSQKLAEEVLKILAEGDDREVETKLLV
Sbjct: 265 EADEGMTLNVQDIDAYWLQRKISQAYEQQIDPQQSQKLAEEVLKILAEGDDREVETKLLV 324
Query: 1300 HLQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHATR 1121
HLQFDKFSLIKYLLRNRLKVVWCTRLARA EM+GLG DH AILEQLHATR
Sbjct: 325 HLQFDKFSLIKYLLRNRLKVVWCTRLARAEDQENRKKIEEEMLGLGQDHVAILEQLHATR 384
Query: 1120 ATAKERQKIVAKNIREEARRLKDETGGDGDRERHQLVDRDADGGWLKGQRQLLDLDSLAF 941
ATAKERQK + K+IREEARRLKDE+G DGD ER LVDRD D GWL GQRQ LDLDSLAF
Sbjct: 385 ATAKERQKNLEKSIREEARRLKDESGVDGDGERKALVDRDLDNGWLMGQRQFLDLDSLAF 444
Query: 940 HQGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKISDMPDWAQPAFR 761
QGGL MANKKCELPVGSYRNH+KGYEEVHVPALKP PL GE+LVKIS +P+WAQPAF
Sbjct: 445 QQGGLLMANKKCELPVGSYRNHKKGYEEVHVPALKPRPLDPGEELVKISSIPEWAQPAFS 504
Query: 760 GMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNE-DGSINHSN 584
GM+QLNRVQSKVYETALFS NILLCAPTGAGKTNVAMLTILQQIALN NE DG+ NH+N
Sbjct: 505 GMTQLNRVQSKVYETALFSPENILLCAPTGAGKTNVAMLTILQQIALNRNEDDGTFNHNN 564
Query: 583 YKIVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKWDI 404
YKIVYVAPMKALVAEVVGNLS RLEHYGV VKELSGDQTLTRQQIEETQIIVTTPEKWDI
Sbjct: 565 YKIVYVAPMKALVAEVVGNLSKRLEHYGVTVKELSGDQTLTRQQIEETQIIVTTPEKWDI 624
Query: 403 ITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSATL 224
ITRKSGDRTYTQLVK DNRGPVLESIIART+RQIETTKEHIRLVGLSATL
Sbjct: 625 ITRKSGDRTYTQLVKLLIVDEIHLLHDNRGPVLESIIARTIRQIETTKEHIRLVGLSATL 684
Query: 223 PNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVIS 44
PNYEDVAV LRV+LK KGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVIS
Sbjct: 685 PNYEDVAVFLRVDLK-KGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVIS 743
Query: 43 VAGKHQVLIFVHSR 2
+AGKHQVLIFVHSR
Sbjct: 744 IAGKHQVLIFVHSR 757
Score = 119 bits (298), Expect = 4e-24
Identities = 87/279 (31%), Positives = 143/279 (51%), Gaps = 9/279 (3%)
Frame = -3
Query: 811 QLVKISDMPDWA--QPAFRGMSQ----LNRVQSKVYETALFSAVNILLCAPTGAGKTNVA 650
+L+ + +P A PA+ + Q N VQ++V+ S N+L+ APTG+GKT A
Sbjct: 1329 ELLDLQPLPVTALRNPAYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICA 1388
Query: 649 MLTILQQIALNMNEDGSINHSNYKIVYVAPMKALVAEVVGNLSNRL-EHYGVKVKELSGD 473
IL+ ++ G S + VY+AP++AL E + + +H G++V EL+G+
Sbjct: 1389 EFAILRN-----HQKGP--DSTIRAVYIAPLEALAKERFNDWKTKFGDHLGMRVVELTGE 1441
Query: 472 QTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESII 293
+ +E+ Q+I++TPEKWD ++R+ R + Q V GP+LE I+
Sbjct: 1442 TASDLKLLEKGQLIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVIV 1501
Query: 292 ARTVRQIETTKEH-IRLVGLSATLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYI 116
+R +R I + E+ IR+V LS +L N +D+ + GLF+F RPVPL
Sbjct: 1502 SR-MRYISSQVENKIRIVALSTSLANAKDLGEW--IGATSHGLFNFPPGVRPVPLEIHIQ 1558
Query: 115 GITVKKPLQRFQLMNDVCYEKVISVAGKHQ-VLIFVHSR 2
G+ + R Q M Y ++ A K + L++V +R
Sbjct: 1559 GVDIANFEARMQAMTKPTYTAIVQHARKGKPALVYVPTR 1597
>ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Solanum tuberosum]
Length = 2174
Score = 901 bits (2328), Expect = 0.0
Identities = 478/614 (77%), Positives = 501/614 (81%), Gaps = 2/614 (0%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDYQXXXXXXXXXXXXX 1658
DE+LAVLKND KNP+KKKEIEKLLNPI FDQLVSIGRLITDYQ
Sbjct: 145 DEMLAVLKNDNFKNPEKKKEIEKLLNPISNQVFDQLVSIGRLITDYQDGGDASASAAADG 204
Query: 1657 XXXXXXXXXXVXXXXXXXXXXE-SXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDDEQ 1481
E S SGAMQMG GIDDD+ +
Sbjct: 205 DDGLDDDVGVAVEFEENEEEEEESDLDVVPDDEEEDDDVMEASASGAMQMGSGIDDDEMR 264
Query: 1480 EANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKLLV 1301
+A+EGM LNVQDIDAYWLQRKISQAY+Q+IDPQQSQKLAEEVLKILAEGDDREVETKLLV
Sbjct: 265 DADEGMALNVQDIDAYWLQRKISQAYEQQIDPQQSQKLAEEVLKILAEGDDREVETKLLV 324
Query: 1300 HLQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHATR 1121
HLQFDKFSLIKYLLRNRLKVVWCTRLARA EM+GLGPDH AILEQLHATR
Sbjct: 325 HLQFDKFSLIKYLLRNRLKVVWCTRLARAEDQENRKKIEEEMLGLGPDHVAILEQLHATR 384
Query: 1120 ATAKERQKIVAKNIREEARRLKDETGGDGDRERHQLVDRDADGGWLKGQRQLLDLDSLAF 941
ATAKERQK + K+IREEARRLKDE+G DGD ER LVDRD D GWL GQRQ LDLDSLAF
Sbjct: 385 ATAKERQKNLEKSIREEARRLKDESGVDGDGERKALVDRDLDNGWLMGQRQFLDLDSLAF 444
Query: 940 HQGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKISDMPDWAQPAFR 761
QGGL MANKKCELPVGSYRNH+KGYEEVHVPALKP PL GE+LVKIS +P+WA+PAF
Sbjct: 445 QQGGLLMANKKCELPVGSYRNHKKGYEEVHVPALKPRPLDPGEELVKISSIPEWARPAFS 504
Query: 760 GMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNE-DGSINHSN 584
GM+QLNRVQSKVYETALFS NILLCAPTGAGKTNVAMLTILQQIALN NE DG+ NH+N
Sbjct: 505 GMTQLNRVQSKVYETALFSPENILLCAPTGAGKTNVAMLTILQQIALNRNEDDGTFNHNN 564
Query: 583 YKIVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKWDI 404
YKIVYVAPMKALVAEVVGNLS RLEHYGV VKELSGDQTLTRQQIEETQIIVTTPEKWDI
Sbjct: 565 YKIVYVAPMKALVAEVVGNLSKRLEHYGVTVKELSGDQTLTRQQIEETQIIVTTPEKWDI 624
Query: 403 ITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSATL 224
ITRKSGDRTYTQLVK DNRGPVLESIIART+RQIETTKEHIRLVGLSATL
Sbjct: 625 ITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIIARTIRQIETTKEHIRLVGLSATL 684
Query: 223 PNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVIS 44
PNYEDVAV LRV+LK KGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVIS
Sbjct: 685 PNYEDVAVFLRVDLK-KGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVIS 743
Query: 43 VAGKHQVLIFVHSR 2
+AGKHQVLIFVHSR
Sbjct: 744 IAGKHQVLIFVHSR 757
Score = 119 bits (298), Expect = 4e-24
Identities = 87/279 (31%), Positives = 143/279 (51%), Gaps = 9/279 (3%)
Frame = -3
Query: 811 QLVKISDMPDWA--QPAFRGMSQ----LNRVQSKVYETALFSAVNILLCAPTGAGKTNVA 650
+L+ + +P A PA+ + Q N VQ++V+ S N+L+ APTG+GKT A
Sbjct: 1329 ELLDLQPLPVTALRNPAYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICA 1388
Query: 649 MLTILQQIALNMNEDGSINHSNYKIVYVAPMKALVAEVVGNLSNRL-EHYGVKVKELSGD 473
IL+ ++ G S + VY+AP++AL E + + +H G++V EL+G+
Sbjct: 1389 EFAILRN-----HQKGP--DSTIRAVYIAPLEALAKERFNDWKTKFGDHLGMRVVELTGE 1441
Query: 472 QTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESII 293
+ +E+ Q+I++TPEKWD ++R+ R + Q V GP+LE I+
Sbjct: 1442 TASDLKLLEKGQLIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVIV 1501
Query: 292 ARTVRQIETTKEH-IRLVGLSATLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYI 116
+R +R I + E+ IR+V LS +L N +D+ + GLF+F RPVPL
Sbjct: 1502 SR-MRYISSQVENKIRIVALSTSLANAKDLGEW--IGATSHGLFNFPPGVRPVPLEIHIQ 1558
Query: 115 GITVKKPLQRFQLMNDVCYEKVISVAGKHQ-VLIFVHSR 2
G+ + R Q M Y ++ A K + L++V +R
Sbjct: 1559 GVDIANFEARMQAMTKPTYTAIVQHARKGKPALVYVPTR 1597
>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase-like [Cucumis sativus]
Length = 2175
Score = 847 bits (2189), Expect = 0.0
Identities = 450/612 (73%), Positives = 486/612 (79%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDYQXXXXXXXXXXXXX 1658
DEILAVLKND+ KNPDKKKEIEKLLNPIP FDQLVSIGRLITDYQ
Sbjct: 147 DEILAVLKNDSFKNPDKKKEIEKLLNPIPNNVFDQLVSIGRLITDYQDGNDATGPATANG 206
Query: 1657 XXXXXXXXXXVXXXXXXXXXXESXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDDEQE 1478
ES +GSGAMQM GGIDDDD QE
Sbjct: 207 DGALDDDIGVAVEFEENEEEEESDLDMVQEDEEDEDDVAEPNGSGAMQMDGGIDDDDLQE 266
Query: 1477 ANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKLLVH 1298
+ GM LNVQDIDAYWLQRKISQAY+Q+IDPQQ QKLAEEVLKILAEGDDRE+ETKLLVH
Sbjct: 267 NDGGMNLNVQDIDAYWLQRKISQAYEQQIDPQQCQKLAEEVLKILAEGDDREIETKLLVH 326
Query: 1297 LQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHATRA 1118
LQF+KFSL+K+LLRNRLKVVWCTRLAR+ EMM LGPD AAILEQLHATRA
Sbjct: 327 LQFEKFSLVKFLLRNRLKVVWCTRLARSEDQEERXKIEEEMMHLGPDLAAILEQLHATRA 386
Query: 1117 TAKERQKIVAKNIREEARRLKDETGGDGDRERHQLVDRDADGGWLKGQRQLLDLDSLAFH 938
TAKERQK + K+IREEARRLKDE+GGD +R R V+RD D G L GQ QLLDLDS+AF
Sbjct: 387 TAKERQKNLEKSIREEARRLKDESGGDAERGRRDPVERDMDNGGLTGQSQLLDLDSIAFQ 446
Query: 937 QGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKISDMPDWAQPAFRG 758
QG L MAN KC LP GSYR+ KGYEE+HVP L P + E+ VKI+ MPDWAQPAF+G
Sbjct: 447 QGSLLMANNKCVLPDGSYRHLGKGYEEIHVPKLNAKPFGSDEKFVKIASMPDWAQPAFKG 506
Query: 757 MSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHSNYK 578
M+QLNRVQSKVYETALF A N+LLCAPTGAGKTNVA+LTILQQIAL+ N DGS NH++YK
Sbjct: 507 MTQLNRVQSKVYETALFKADNVLLCAPTGAGKTNVAVLTILQQIALHTNPDGSYNHNDYK 566
Query: 577 IVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKWDIIT 398
IVYVAPMKALVAEVVGNLSNRL+ YGVKV+ELSGDQTLTRQQI+ETQIIVTTPEKWDIIT
Sbjct: 567 IVYVAPMKALVAEVVGNLSNRLQDYGVKVRELSGDQTLTRQQIDETQIIVTTPEKWDIIT 626
Query: 397 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSATLPN 218
RKSGDRTYTQLVK DNRGPVLESI+ARTVRQIETTKEHIRLVGLSATLPN
Sbjct: 627 RKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSATLPN 686
Query: 217 YEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVISVA 38
YEDVA+ LRV+ K KGLFHFDNSYRPV L QQYIGITVKKPLQRFQLMND+CYEKV+S A
Sbjct: 687 YEDVALFLRVDPK-KGLFHFDNSYRPVALYQQYIGITVKKPLQRFQLMNDLCYEKVMSFA 745
Query: 37 GKHQVLIFVHSR 2
GKHQVLIFVHSR
Sbjct: 746 GKHQVLIFVHSR 757
Score = 112 bits (280), Expect = 5e-22
Identities = 86/297 (28%), Positives = 142/297 (47%), Gaps = 9/297 (3%)
Frame = -3
Query: 865 YEEVHVPALKPMPLAAGEQLVKISDMPDWA--QPAFRGMSQ----LNRVQSKVYETALFS 704
+ + +P P P+ +L+ + +P A P++ + Q N VQ++V+ +
Sbjct: 1315 FRHLILPEKFPPPM----ELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNT 1370
Query: 703 AVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHSNYKIVYVAPMKALVAEVVGNL 524
N+L+ APTG+GKT A IL+ +D + + VY+AP+++L E +
Sbjct: 1371 DDNVLVAAPTGSGKTICAEFAILRNY--QKGQDNVL-----RAVYIAPIESLAKERYRDW 1423
Query: 523 SNRL-EHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXX 347
+ + G++V EL+G+ + +E QII++TPEKWD ++R+ R Y Q V
Sbjct: 1424 DKKFGKGLGIRVVELTGETATDLKLLERGQIIISTPEKWDALSRRWKQRKYVQQVSLFII 1483
Query: 346 XXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSATLPNYEDVAVLLRVNLKEKGL 167
GPVLE I++R + IR+V LS +L N +D+ + GL
Sbjct: 1484 DELHLIGGQGGPVLEVIVSRMRYIASQIENKIRIVALSTSLANAKDIGDW--IGATSHGL 1541
Query: 166 FHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVISVA--GKHQVLIFVHSR 2
F+F RPVPL G+ + R Q M Y ++ A GK ++FV +R
Sbjct: 1542 FNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNGK-PAIVFVPTR 1597
>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Cucumis sativus]
Length = 2175
Score = 847 bits (2189), Expect = 0.0
Identities = 449/612 (73%), Positives = 485/612 (79%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDYQXXXXXXXXXXXXX 1658
DEILAVLKND+ KNPDKKKEIEKLLNPIP FDQLVSIGRLITDYQ
Sbjct: 147 DEILAVLKNDSFKNPDKKKEIEKLLNPIPNNVFDQLVSIGRLITDYQDGNDATGPATANG 206
Query: 1657 XXXXXXXXXXVXXXXXXXXXXESXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDDEQE 1478
ES +GSGAMQM GGIDDDD QE
Sbjct: 207 DGALDDDIGVAVEFEENEEEEESDLDMVQEDEEDEDDVAEPNGSGAMQMDGGIDDDDLQE 266
Query: 1477 ANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKLLVH 1298
+ GM LNVQDIDAYWLQRKISQAY+Q+IDPQQ QKLAEEVLKILAEGDDRE+ETKLLVH
Sbjct: 267 NDGGMNLNVQDIDAYWLQRKISQAYEQQIDPQQCQKLAEEVLKILAEGDDREIETKLLVH 326
Query: 1297 LQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHATRA 1118
LQF+KFSL+K+LLRNRLKVVWCTRLAR+ EMM LGPD AAILEQLHATRA
Sbjct: 327 LQFEKFSLVKFLLRNRLKVVWCTRLARSEDQEERKKIEEEMMHLGPDLAAILEQLHATRA 386
Query: 1117 TAKERQKIVAKNIREEARRLKDETGGDGDRERHQLVDRDADGGWLKGQRQLLDLDSLAFH 938
TAKERQK + K+IREEARRLKDE+GGD +R R V+RD D G L GQ QLLDLDS+AF
Sbjct: 387 TAKERQKNLEKSIREEARRLKDESGGDAERGRRDPVERDMDNGGLTGQSQLLDLDSIAFQ 446
Query: 937 QGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKISDMPDWAQPAFRG 758
QG L MAN KC LP GSYR+ KGYEE+HVP L P + E+ VKI+ MPDWAQPAF+G
Sbjct: 447 QGSLLMANNKCVLPDGSYRHLGKGYEEIHVPKLNAKPFGSDEKFVKIASMPDWAQPAFKG 506
Query: 757 MSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHSNYK 578
M+QLNRVQSKVYETALF A N+LLCAPTGAGKTNVA+LTILQQIAL+ N DGS NH++YK
Sbjct: 507 MTQLNRVQSKVYETALFKADNVLLCAPTGAGKTNVAVLTILQQIALHTNPDGSYNHNDYK 566
Query: 577 IVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKWDIIT 398
IVYVAPMKALVAEVVGNLSNRL+ YGVKV+ELSGDQTLTRQQI+ETQIIVTTPEKWDIIT
Sbjct: 567 IVYVAPMKALVAEVVGNLSNRLQDYGVKVRELSGDQTLTRQQIDETQIIVTTPEKWDIIT 626
Query: 397 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSATLPN 218
RKSGDRTYTQLVK DNRGPVLESI+ARTVRQIETTKEHIRLVGLSATLPN
Sbjct: 627 RKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSATLPN 686
Query: 217 YEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVISVA 38
YEDVA+ LRV+ K KGLFHFDNSYRPV L QQYIGITVKKPLQRFQLMND+CYEKV+S A
Sbjct: 687 YEDVALFLRVDPK-KGLFHFDNSYRPVALYQQYIGITVKKPLQRFQLMNDLCYEKVMSFA 745
Query: 37 GKHQVLIFVHSR 2
GKHQVLIFVHSR
Sbjct: 746 GKHQVLIFVHSR 757
Score = 112 bits (279), Expect = 7e-22
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 3/283 (1%)
Frame = -3
Query: 841 LKPMPLAAGEQLVKISDMPDWAQPAFRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGK 662
L+P+P+ A P + + ++ N VQ++V+ + N+L+ APTG+GK
Sbjct: 1333 LQPLPVTALRN-------PSY-EALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGK 1384
Query: 661 TNVAMLTILQQIALNMNEDGSINHSNYKIVYVAPMKALVAEVVGNLSNRL-EHYGVKVKE 485
T A IL+ +D + + VY+AP+++L E + + + G++V E
Sbjct: 1385 TICAEFAILRNY--QKGQDNVL-----RAVYIAPIESLAKERYRDWDKKFGKGLGIRVVE 1437
Query: 484 LSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVL 305
L+G+ + +E QII++TPEKWD ++R+ R Y Q V GPVL
Sbjct: 1438 LTGETATDLKLLERGQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVL 1497
Query: 304 ESIIARTVRQIETTKEHIRLVGLSATLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQ 125
E I++R + IR+V LS +L N +D+ + GLF+F RPVPL
Sbjct: 1498 EVIVSRMRYIASQIENKIRIVALSTSLANAKDIGDW--IGATSHGLFNFPPGVRPVPLEI 1555
Query: 124 QYIGITVKKPLQRFQLMNDVCYEKVISVA--GKHQVLIFVHSR 2
G+ + R Q M Y ++ A GK ++FV +R
Sbjct: 1556 HIQGVDIANFEARMQAMTKPTYTAIVQHAKNGK-PAIVFVPTR 1597
>ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Citrus sinensis]
gi|568853532|ref|XP_006480406.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like isoform
X2 [Citrus sinensis]
Length = 2179
Score = 844 bits (2180), Expect = 0.0
Identities = 450/615 (73%), Positives = 491/615 (79%), Gaps = 3/615 (0%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDYQXXXXXXXXXXXXX 1658
DEILAVLKND +KNPDKKKEIEKLLNPIP FDQLVSIG+LITDYQ
Sbjct: 152 DEILAVLKNDAVKNPDKKKEIEKLLNPIPNHVFDQLVSIGKLITDYQDAGDAAGNDVANG 211
Query: 1657 XXXXXXXXXXVXXXXXXXXXXESXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDDEQE 1478
E + + + M G DD+ E
Sbjct: 212 GEDLDDDMGVAVEFEENDDDEEESDLDMVQEEDEEEEEDVAEPNASGAMQMGGGIDDDDE 271
Query: 1477 ---ANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKL 1307
ANEGM+LNVQDIDAYWLQRKISQA+DQ+IDPQQ QKLAEEVLKILAEGDDREVE KL
Sbjct: 272 SGDANEGMSLNVQDIDAYWLQRKISQAFDQQIDPQQCQKLAEEVLKILAEGDDREVENKL 331
Query: 1306 LVHLQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHA 1127
L HLQFDKFSLIK+LLRNRLKVVWCTRLARA EMMGLGPD AAIL+QLHA
Sbjct: 332 LYHLQFDKFSLIKFLLRNRLKVVWCTRLARAQDQEERKKIEEEMMGLGPDLAAILDQLHA 391
Query: 1126 TRATAKERQKIVAKNIREEARRLKDETGGDGDRERHQLVDRDADGGWLKGQRQLLDLDSL 947
TRATAKERQK + K+IREEARRLKDE+ DG R+R LVDRDADGGWL GQRQLLDLD+L
Sbjct: 392 TRATAKERQKNLEKSIREEARRLKDESASDGGRDRRGLVDRDADGGWL-GQRQLLDLDTL 450
Query: 946 AFHQGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKISDMPDWAQPA 767
AF QGGLFMAN+KC+LP GS R KGYEE+HVPA+K PL E+L+KIS+MP+WAQPA
Sbjct: 451 AFQQGGLFMANRKCDLPEGSQRFTNKGYEEIHVPAMKHKPLDPNEKLIKISEMPEWAQPA 510
Query: 766 FRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHS 587
F+GM+QLNRVQS+VY++AL SA NILLCAPTGAGKTNVA+LTILQQ+ALN N+DGS NHS
Sbjct: 511 FKGMTQLNRVQSRVYKSALSSADNILLCAPTGAGKTNVAVLTILQQLALNRNDDGSFNHS 570
Query: 586 NYKIVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKWD 407
NYKIVYVAPMKALVAEVVGNLSNRL+ Y VKV+ELSGDQTLTRQQIEETQIIVTTPEKWD
Sbjct: 571 NYKIVYVAPMKALVAEVVGNLSNRLQMYDVKVRELSGDQTLTRQQIEETQIIVTTPEKWD 630
Query: 406 IITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSAT 227
IITRKSGDRTYTQLVK DNRGPVLESI+ARTVRQIETTKEHIRLVGLSAT
Sbjct: 631 IITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSAT 690
Query: 226 LPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVI 47
LPNYEDVA+ LRVNL EKGLF+FDNSYRPVPL+QQYIGI VKKPLQRFQLMND+CYEKV+
Sbjct: 691 LPNYEDVALFLRVNL-EKGLFYFDNSYRPVPLSQQYIGIQVKKPLQRFQLMNDLCYEKVV 749
Query: 46 SVAGKHQVLIFVHSR 2
+VAGKHQVLIFVHSR
Sbjct: 750 AVAGKHQVLIFVHSR 764
Score = 117 bits (294), Expect = 1e-23
Identities = 77/257 (29%), Positives = 126/257 (49%), Gaps = 2/257 (0%)
Frame = -3
Query: 766 FRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHS 587
++G N +Q++V+ + N+L+ APTG+GKT I + A+ N +
Sbjct: 1357 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKT------ICSEFAILRNHQKASETG 1410
Query: 586 NYKIVYVAPMKALVAEVVGNLSNRL-EHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKW 410
+ VY+AP++AL E + + + G++V EL+G+ + + +E+ QII++TPEKW
Sbjct: 1411 VMRAVYIAPLEALAKERYRDWEIKFGQGLGMRVVELTGETAMDLKLLEKGQIIISTPEKW 1470
Query: 409 DIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSA 230
D ++R+ R Y Q V GPVLE I++R + IR+V LS
Sbjct: 1471 DALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQVENKIRIVALST 1530
Query: 229 TLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKV 50
+L N +D+ + GLF+F RPVPL G+ + R Q M + +
Sbjct: 1531 SLANAKDLGEW--IGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTFTAI 1588
Query: 49 ISVA-GKHQVLIFVHSR 2
+ A + L+FV SR
Sbjct: 1589 VQHAKNEKPALVFVPSR 1605
>ref|XP_006428572.1| hypothetical protein CICLE_v100108901mg, partial [Citrus clementina]
gi|557530629|gb|ESR41812.1| hypothetical protein
CICLE_v100108901mg, partial [Citrus clementina]
Length = 1791
Score = 844 bits (2180), Expect = 0.0
Identities = 450/615 (73%), Positives = 491/615 (79%), Gaps = 3/615 (0%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDYQXXXXXXXXXXXXX 1658
DEILAVLKND +KNPDKKKEIEKLLNPIP FDQLVSIG+LITDYQ
Sbjct: 152 DEILAVLKNDAVKNPDKKKEIEKLLNPIPNHVFDQLVSIGKLITDYQDAGDAAGNDVANG 211
Query: 1657 XXXXXXXXXXVXXXXXXXXXXESXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDDEQE 1478
E + + + M G DD+ E
Sbjct: 212 GEDLDDDMGVAVEFEENDDDEEESDLDMVQEEDEEEEEDVAEPNASGAMQMGGGIDDDDE 271
Query: 1477 ---ANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKL 1307
ANEGM+LNVQDIDAYWLQRKISQA+DQ+IDPQQ QKLAEEVLKILAEGDDREVE KL
Sbjct: 272 SGDANEGMSLNVQDIDAYWLQRKISQAFDQQIDPQQCQKLAEEVLKILAEGDDREVENKL 331
Query: 1306 LVHLQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHA 1127
L HLQFDKFSLIK+LLRNRLKVVWCTRLARA EMMGLGPD AAIL+QLHA
Sbjct: 332 LYHLQFDKFSLIKFLLRNRLKVVWCTRLARAQDQEERKKIEEEMMGLGPDLAAILDQLHA 391
Query: 1126 TRATAKERQKIVAKNIREEARRLKDETGGDGDRERHQLVDRDADGGWLKGQRQLLDLDSL 947
TRATAKERQK + K+IREEARRLKDE+ DG R+R LVDRDADGGWL GQRQLLDLD+L
Sbjct: 392 TRATAKERQKNLEKSIREEARRLKDESASDGGRDRRGLVDRDADGGWL-GQRQLLDLDTL 450
Query: 946 AFHQGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKISDMPDWAQPA 767
AF QGGLFMAN+KC+LP GS R KGYEE+HVPA+K PL E+L+KIS+MP+WAQPA
Sbjct: 451 AFQQGGLFMANRKCDLPEGSQRFTNKGYEEIHVPAMKHKPLDPNEKLIKISEMPEWAQPA 510
Query: 766 FRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHS 587
F+GM+QLNRVQS+VY++AL SA NILLCAPTGAGKTNVA+LTILQQ+ALN N+DGS NHS
Sbjct: 511 FKGMTQLNRVQSRVYKSALSSADNILLCAPTGAGKTNVAVLTILQQLALNRNDDGSFNHS 570
Query: 586 NYKIVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKWD 407
NYKIVYVAPMKALVAEVVGNLSNRL+ Y VKV+ELSGDQTLTRQQIEETQIIVTTPEKWD
Sbjct: 571 NYKIVYVAPMKALVAEVVGNLSNRLQMYDVKVRELSGDQTLTRQQIEETQIIVTTPEKWD 630
Query: 406 IITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSAT 227
IITRKSGDRTYTQLVK DNRGPVLESI+ARTVRQIETTKEHIRLVGLSAT
Sbjct: 631 IITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSAT 690
Query: 226 LPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVI 47
LPNYEDVA+ LRVNL EKGLF+FDNSYRPVPL+QQYIGI VKKPLQRFQLMND+CYEKV+
Sbjct: 691 LPNYEDVALFLRVNL-EKGLFYFDNSYRPVPLSQQYIGIQVKKPLQRFQLMNDLCYEKVV 749
Query: 46 SVAGKHQVLIFVHSR 2
+VAGKHQVLIFVHSR
Sbjct: 750 AVAGKHQVLIFVHSR 764
Score = 117 bits (294), Expect = 1e-23
Identities = 77/257 (29%), Positives = 126/257 (49%), Gaps = 2/257 (0%)
Frame = -3
Query: 766 FRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHS 587
++G N +Q++V+ + N+L+ APTG+GKT I + A+ N +
Sbjct: 1357 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKT------ICSEFAILRNHQKASETG 1410
Query: 586 NYKIVYVAPMKALVAEVVGNLSNRL-EHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKW 410
+ VY+AP++AL E + + + G++V EL+G+ + + +E+ QII++TPEKW
Sbjct: 1411 VMRAVYIAPLEALAKERYRDWEIKFGQGLGMRVVELTGETAMDLKLLEKGQIIISTPEKW 1470
Query: 409 DIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSA 230
D ++R+ R Y Q V GPVLE I++R + IR+V LS
Sbjct: 1471 DALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQVENKIRIVALST 1530
Query: 229 TLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKV 50
+L N +D+ + GLF+F RPVPL G+ + R Q M + +
Sbjct: 1531 SLANAKDLGEW--IGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTFTAI 1588
Query: 49 ISVA-GKHQVLIFVHSR 2
+ A + L+FV SR
Sbjct: 1589 VQHAKNEKPALVFVPSR 1605
>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Glycine max]
Length = 2183
Score = 830 bits (2143), Expect = 0.0
Identities = 445/620 (71%), Positives = 493/620 (79%), Gaps = 8/620 (1%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDYQXXXXXXXXXXXXX 1658
DEILAVLKNDT+KNPDKKK+IEKLLNPIPG FDQLVSIG+LITD+Q
Sbjct: 149 DEILAVLKNDTVKNPDKKKDIEKLLNPIPGHVFDQLVSIGKLITDFQEVVDVPNGSSAMD 208
Query: 1657 XXXXXXXXXXVXXXXXXXXXXE--SXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDDE 1484
V + S +GSGAMQMGG IDD+D
Sbjct: 209 GEEGLDDDVGVAVEFEENEDDDEESDLDIVQDEEEDDEDVAEPNGSGAMQMGG-IDDEDM 267
Query: 1483 QEANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKLL 1304
+E NEGM LNVQDIDAYWLQRKISQA++Q+IDPQ QKLAEEVLKILAEGDDREVE KLL
Sbjct: 268 EEGNEGMGLNVQDIDAYWLQRKISQAFEQQIDPQHCQKLAEEVLKILAEGDDREVENKLL 327
Query: 1303 VHLQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHAT 1124
HL+FDKFSLIK+LLRNRLK+VWCTRLARA EM G + ILEQLHAT
Sbjct: 328 FHLEFDKFSLIKFLLRNRLKIVWCTRLARAQDQEEREKIEEEMKGT--ELQPILEQLHAT 385
Query: 1123 RATAKERQKIVAKNIREEARRLKDETGGDGDRE-----RHQLVDRDADGGWLKGQRQLLD 959
RA+AKERQK + K+IREEARRLKD+TGGDGD+E R + DRD + GWLKGQRQ+LD
Sbjct: 386 RASAKERQKNLEKSIREEARRLKDDTGGDGDKESRDRSRRGVADRDGESGWLKGQRQMLD 445
Query: 958 LDSLAFHQGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKISDMPDW 779
LDS+AF QGG FMA KKC+LP GSYR+ KGYEE+HVPALK PL E+LVKIS MPDW
Sbjct: 446 LDSIAFTQGGFFMAKKKCDLPDGSYRHLSKGYEEIHVPALKAKPLDPNEKLVKISSMPDW 505
Query: 778 AQPAFRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMN-EDG 602
AQPAF+GM+QLNRVQSKVYETALF N+LLCAPTGAGKTNVA+LTILQQIA + N EDG
Sbjct: 506 AQPAFKGMTQLNRVQSKVYETALFKPDNLLLCAPTGAGKTNVAVLTILQQIARHRNPEDG 565
Query: 601 SINHSNYKIVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQIIVTT 422
SI+HS YKIVYVAPMKALVAEVVGNLSNRL+ Y VKV+ELSGDQ+LTRQQIEETQIIVTT
Sbjct: 566 SIDHSAYKIVYVAPMKALVAEVVGNLSNRLQEYDVKVRELSGDQSLTRQQIEETQIIVTT 625
Query: 421 PEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLV 242
PEKWDIITRKSGDRTYTQLVK DNRGPVLESI+ARTVRQIETTK++IRLV
Sbjct: 626 PEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKDYIRLV 685
Query: 241 GLSATLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVC 62
GLSATLPNYEDVA+ LRV+LK KGLF+FDNSYRPVPL+QQY+GITVKKPLQRFQLMND+C
Sbjct: 686 GLSATLPNYEDVALFLRVDLK-KGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQLMNDIC 744
Query: 61 YEKVISVAGKHQVLIFVHSR 2
YEKV++VAGKHQVLIFVHSR
Sbjct: 745 YEKVMAVAGKHQVLIFVHSR 764
Score = 108 bits (269), Expect = 1e-20
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 4/259 (1%)
Frame = -3
Query: 766 FRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHS 587
++ N VQ++V+ S N+L+ APTG+GKT A IL+ ++ G S
Sbjct: 1357 YKDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRN-----HQKGP--DS 1409
Query: 586 NYKIVYVAPMKALVAEVVGNLSNRLEHYGVKVK--ELSGDQTLTRQQIEETQIIVTTPEK 413
++VYVAP++AL E + + G+K++ EL+G+ + +E+ QII++TPEK
Sbjct: 1410 VMRVVYVAPVEALAKERYRDWERKFGG-GLKLRVVELTGETATDLKLLEKGQIIISTPEK 1468
Query: 412 WDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLS 233
WD ++R+ R + Q V GP+LE +++R + R+V LS
Sbjct: 1469 WDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVVVSRMRYIASQVENKSRIVALS 1528
Query: 232 ATLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEK 53
+L N +D+ + GLF+F RPVPL GI + R Q M Y
Sbjct: 1529 TSLANAKDLGEW--IGATSHGLFNFPPGVRPVPLEIHIQGIDITNFEARMQAMTKPTYTA 1586
Query: 52 VISVA--GKHQVLIFVHSR 2
++ A GK LIFV +R
Sbjct: 1587 IVQHAKNGK-PALIFVPTR 1604
>ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Glycine max]
Length = 2183
Score = 823 bits (2127), Expect = 0.0
Identities = 442/620 (71%), Positives = 491/620 (79%), Gaps = 8/620 (1%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDYQXXXXXXXXXXXXX 1658
DEILAVLKND +KNPDKKK+IEKLLNPIPG FDQLVSIG+LITD+Q
Sbjct: 149 DEILAVLKNDVVKNPDKKKDIEKLLNPIPGHVFDQLVSIGKLITDFQEAVDVPNGSSAMD 208
Query: 1657 XXXXXXXXXXVXXXXXXXXXXE--SXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDDE 1484
V + S + SGAMQMGG IDD+D
Sbjct: 209 GEEGLDDDVGVAVEFEENEDDDEESDLDIVQDEEEEDEDVTEPNSSGAMQMGG-IDDEDM 267
Query: 1483 QEANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKLL 1304
+E NEGM LNVQDIDAYWLQRKISQA++Q+IDPQ QKLAEEVLKILAEGDDREVE KLL
Sbjct: 268 EEGNEGMGLNVQDIDAYWLQRKISQAFEQQIDPQHCQKLAEEVLKILAEGDDREVENKLL 327
Query: 1303 VHLQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHAT 1124
HL+FDKFSLIK+LLRNRLK+VWCTRLARA EM G + ILEQLHAT
Sbjct: 328 FHLEFDKFSLIKFLLRNRLKIVWCTRLARAQDQEERERIEEEMKGT--ELQPILEQLHAT 385
Query: 1123 RATAKERQKIVAKNIREEARRLKDETGGDGDRE-----RHQLVDRDADGGWLKGQRQLLD 959
RA+AKERQK + K+IREEARRLKD+TGGDGD+E R + DRD + GWLKGQRQ+LD
Sbjct: 386 RASAKERQKNLEKSIREEARRLKDDTGGDGDKESRDRSRRVVADRDGESGWLKGQRQMLD 445
Query: 958 LDSLAFHQGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKISDMPDW 779
LDS+AF QGG FMA KKC+LP GSYR+ KGYEE+HVPALK PL E+LVKIS MPDW
Sbjct: 446 LDSIAFAQGGFFMAKKKCDLPDGSYRHLSKGYEEIHVPALKAKPLDPNEKLVKISSMPDW 505
Query: 778 AQPAFRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMN-EDG 602
AQPAF+GM+QLNRVQSKVYETALF N+LLCAPTGAGKTNVA+LTILQQIA + N +DG
Sbjct: 506 AQPAFKGMTQLNRVQSKVYETALFQPDNLLLCAPTGAGKTNVAVLTILQQIARHRNPKDG 565
Query: 601 SINHSNYKIVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQIIVTT 422
SI+HS YKIVYVAPMKALVAEVVGNLSNRL+ Y VKV+ELSGDQ+LTRQQIEETQIIVTT
Sbjct: 566 SIDHSAYKIVYVAPMKALVAEVVGNLSNRLQDYDVKVRELSGDQSLTRQQIEETQIIVTT 625
Query: 421 PEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLV 242
PEKWDIITRKSGDRTYTQLVK DNRGPVLESI+ARTVRQIETTK++IRLV
Sbjct: 626 PEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKDYIRLV 685
Query: 241 GLSATLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVC 62
GLSATLPNYEDVA+ LRV+LK KGLF+FDNSYRPVPL+QQY+GITVKKPLQRFQLMND+C
Sbjct: 686 GLSATLPNYEDVALFLRVDLK-KGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQLMNDIC 744
Query: 61 YEKVISVAGKHQVLIFVHSR 2
YEKV++VAGKHQVLIFVHSR
Sbjct: 745 YEKVMAVAGKHQVLIFVHSR 764
Score = 108 bits (271), Expect = 6e-21
Identities = 85/289 (29%), Positives = 137/289 (47%), Gaps = 9/289 (3%)
Frame = -3
Query: 841 LKPMPLAAGEQLVKISDMPDWAQPAFRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGK 662
L+P+P+ A P + + ++ N VQ++V+ S N+L+ APTG+GK
Sbjct: 1340 LQPLPVTALRN-------PSY-ESLYKDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGK 1391
Query: 661 TNVAMLTILQQIALNMNEDGSINHSNY-----KIVYVAPMKALVAEVVGNLSNRLEHYGV 497
T A IL+ NH + ++VYVAP+++L E + + G+
Sbjct: 1392 TICAEFAILR------------NHQKWPDSVMRVVYVAPIESLAKERYRDWEKKFGG-GL 1438
Query: 496 KVK--ELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXD 323
K++ EL+G+ + +E+ QII++TPEKWD ++R+ R + Q V
Sbjct: 1439 KLRVVELTGETATDLKLLEKGQIIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGG 1498
Query: 322 NRGPVLESIIARTVRQIETTKEHIRLVGLSATLPNYEDVAVLLRVNLKEKGLFHFDNSYR 143
GP+LE +++R + IR+V LS +L N +D+ + GLF+F R
Sbjct: 1499 QGGPILEVVVSRMRYIASQVENKIRVVALSTSLANAKDLGEW--IGATSHGLFNFPPGVR 1556
Query: 142 PVPLAQQYIGITVKKPLQRFQLMNDVCYEKVISVA--GKHQVLIFVHSR 2
PVPL GI + R Q M Y ++ A GK L+FV +R
Sbjct: 1557 PVPLEIHIQGIDIANFEARMQAMTKPTYTAIVQHAKNGK-PALVFVPTR 1604
>gb|EMJ09609.1| hypothetical protein PRUPE_ppa000042mg [Prunus persica]
Length = 2180
Score = 822 bits (2123), Expect = 0.0
Identities = 441/615 (71%), Positives = 488/615 (79%), Gaps = 3/615 (0%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDYQXXXXXXXXXXXXX 1658
DEILAVLKN+T KNPDKKKEIEK+LNPIP FDQLVSIGRLITD+Q
Sbjct: 147 DEILAVLKNETFKNPDKKKEIEKMLNPIPNSVFDQLVSIGRLITDFQDGGDAGGSAVANG 206
Query: 1657 XXXXXXXXXXVXXXXXXXXXXESXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDDE-- 1484
+ + + + M G DD+
Sbjct: 207 DEALDDDVGVAVEFEENEDDEDESDLDMVQEDEEEDDDDVAEPNHSGAMQMGGGIDDDEM 266
Query: 1483 QEANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKLL 1304
QEANEGM+LNVQDI+AYWLQR IS AY++++DPQQ QKLAEEVLKILAEGDDREVETKLL
Sbjct: 267 QEANEGMSLNVQDINAYWLQRNISDAYEKQMDPQQCQKLAEEVLKILAEGDDREVETKLL 326
Query: 1303 VHLQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHAT 1124
V+LQF+KFSLIK+LLRNRLK+VWCTRLARA EM+ LGP+ AAILEQLHAT
Sbjct: 327 VNLQFEKFSLIKFLLRNRLKIVWCTRLARAEDQDERNKIEEEMLRLGPELAAILEQLHAT 386
Query: 1123 RATAKERQKIVAKNIREEARRLKDETGGDGDRERHQLVDRDADGGWLKGQRQLLDLDSLA 944
RA+AKERQKIV KNIREEARRLKDE+GGDGDR R LVDRD D GWLK Q QLLDLDS+A
Sbjct: 387 RASAKERQKIVEKNIREEARRLKDESGGDGDRARRGLVDRDVDSGWLKSQAQLLDLDSIA 446
Query: 943 FHQGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKISDMPDWAQPAF 764
Q L + +KKC LP GSYR+ KGYEE+HVPALKP P E+LVKISDMP+WAQPAF
Sbjct: 447 QEQSRL-LVSKKCVLPDGSYRHPSKGYEEIHVPALKPRPFDPDERLVKISDMPEWAQPAF 505
Query: 763 RGMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMN-EDGSINHS 587
RGM+QLNRVQS+VYETALF A NILLCAPTGAGKTNVA+LTILQQIAL+MN EDGSINH+
Sbjct: 506 RGMNQLNRVQSRVYETALFRADNILLCAPTGAGKTNVAVLTILQQIALHMNKEDGSINHN 565
Query: 586 NYKIVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKWD 407
+YKIVYVAPMKALVAEVVGNLSNRL+ YGV V+ELSGDQTLTRQQIEETQIIVTTPEKWD
Sbjct: 566 DYKIVYVAPMKALVAEVVGNLSNRLKEYGVTVRELSGDQTLTRQQIEETQIIVTTPEKWD 625
Query: 406 IITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSAT 227
IITRKSGDRTYTQLVK DNRGPVLESI+ARTVRQIETTK+HIRLVGLSAT
Sbjct: 626 IITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKDHIRLVGLSAT 685
Query: 226 LPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVI 47
LPNYEDVA+ LRV+LK +GLF+FDNSYRPVPL+QQYIGI V+KPLQRFQLMND+CYEKV+
Sbjct: 686 LPNYEDVALFLRVDLK-RGLFYFDNSYRPVPLSQQYIGIMVRKPLQRFQLMNDLCYEKVM 744
Query: 46 SVAGKHQVLIFVHSR 2
VAGKHQVLIFVHSR
Sbjct: 745 DVAGKHQVLIFVHSR 759
Score = 106 bits (264), Expect = 4e-20
Identities = 76/258 (29%), Positives = 128/258 (49%), Gaps = 3/258 (1%)
Frame = -3
Query: 766 FRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHS 587
++ N VQ++V+ S N+L+ APTG+GKT A +L+ ++ GS S
Sbjct: 1352 YQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAVLRN-----HQKGS--DS 1404
Query: 586 NYKIVYVAPMKALVAEVVGNLSNRL-EHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKW 410
++VY+AP++AL E + + + ++++ L+G+ + +E+ QII++TPEKW
Sbjct: 1405 VMRVVYIAPIEALAKERYRDWEKKFGKGLKLRIELLTGETATDAKLLEKGQIIISTPEKW 1464
Query: 409 DIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSA 230
D ++R+ R Q V GP+LE I++R ++ IR+V LS
Sbjct: 1465 DALSRRWKQRKPVQQVSLFIIDELHLIGGQGGPILEVIVSRMRYIASLSENKIRIVALST 1524
Query: 229 TLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKV 50
+L N +D+ + GLF+F RPVPL G+ + R Q M Y +
Sbjct: 1525 SLANAKDLGEW--IGASSHGLFNFPPGVRPVPLEIHIQGVDLANFEARMQAMAKPTYTAI 1582
Query: 49 ISVA--GKHQVLIFVHSR 2
+ A GK L++V +R
Sbjct: 1583 VQHAKNGK-PALVYVPTR 1599
>gb|ESW21254.1| hypothetical protein PHAVU_005G055300g [Phaseolus vulgaris]
gi|561022525|gb|ESW21255.1| hypothetical protein
PHAVU_005G055300g [Phaseolus vulgaris]
Length = 2184
Score = 820 bits (2117), Expect = 0.0
Identities = 438/619 (70%), Positives = 491/619 (79%), Gaps = 7/619 (1%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDYQXXXXXXXXXXXXX 1658
DEILAVLKND +KN DKKK+IEKLLNPI FDQLVSIG+LITD+Q
Sbjct: 149 DEILAVLKNDVLKNTDKKKDIEKLLNPIANHVFDQLVSIGKLITDFQEAADVPNGNSAMD 208
Query: 1657 XXXXXXXXXXVXXXXXXXXXXE--SXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDDE 1484
V + S +GSGAMQMGGGIDD+D
Sbjct: 209 GEEGLDDDVGVAVEFEENEDDDEESDLDIVQDEEEEEEDGVEQNGSGAMQMGGGIDDEDM 268
Query: 1483 QEANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKLL 1304
++ NEGM+LNVQDIDAYWLQRKIS A++Q+IDPQQ QKLAEEVLKILAEGDDREVE+KLL
Sbjct: 269 EDGNEGMSLNVQDIDAYWLQRKISLAFEQQIDPQQCQKLAEEVLKILAEGDDREVESKLL 328
Query: 1303 VHLQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHAT 1124
HL+FDKFSLIK+LLRNRLK+VWCTRLARA EM G + ILEQLHAT
Sbjct: 329 FHLEFDKFSLIKFLLRNRLKIVWCTRLARAQDQEERERIEEEMKGT--ELQPILEQLHAT 386
Query: 1123 RATAKERQKIVAKNIREEARRLKDETGGDGDRERHQ----LVDRDADGGWLKGQRQLLDL 956
RA+AKERQK + K+IREEARRLKD+TGGDGD+ER + DRD + GWLKGQRQ+LDL
Sbjct: 387 RASAKERQKNLEKSIREEARRLKDDTGGDGDKERERGRRGPADRDGESGWLKGQRQMLDL 446
Query: 955 DSLAFHQGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKISDMPDWA 776
+++AF QGG FMA KKC+LP GSYR+ KGYEE+HVPALK L E+LVKIS MPDWA
Sbjct: 447 ENIAFAQGGFFMAKKKCDLPDGSYRHLSKGYEEIHVPALKAKALDPNEKLVKISSMPDWA 506
Query: 775 QPAFRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMN-EDGS 599
QPAF+GMSQLNRVQSKVY+TALF N+LLCAPTGAGKTNVA+LTILQQIA + N EDGS
Sbjct: 507 QPAFKGMSQLNRVQSKVYDTALFKPDNLLLCAPTGAGKTNVAVLTILQQIARHRNPEDGS 566
Query: 598 INHSNYKIVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQIIVTTP 419
I+HS YKIVYVAPMKALVAEVVGNLSNRL+ Y VKV+ELSGDQ+LTRQQIEETQIIVTTP
Sbjct: 567 IDHSAYKIVYVAPMKALVAEVVGNLSNRLQEYDVKVRELSGDQSLTRQQIEETQIIVTTP 626
Query: 418 EKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVG 239
EKWDIITRKSGDRTYTQLVK DNRGPVLESI+ARTVRQIETTK++IRLVG
Sbjct: 627 EKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKDYIRLVG 686
Query: 238 LSATLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCY 59
LSATLPNYEDVA+ LRV+LK KGLF+FDNSYRPVPL+QQY+GITVKKPLQRFQLMND+CY
Sbjct: 687 LSATLPNYEDVALFLRVDLK-KGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQLMNDICY 745
Query: 58 EKVISVAGKHQVLIFVHSR 2
EKV++VAGKHQVLIFVHSR
Sbjct: 746 EKVMAVAGKHQVLIFVHSR 764
Score = 112 bits (279), Expect = 7e-22
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 3/283 (1%)
Frame = -3
Query: 841 LKPMPLAAGEQLVKISDMPDWAQPAFRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGK 662
L+P+P+ A P + + ++ N VQ++V+ S N+L+ APTG+GK
Sbjct: 1340 LQPLPVTALRN-------PSY-EALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGK 1391
Query: 661 TNVAMLTILQQIALNMNEDGSINHSNYKIVYVAPMKALVAEVVGNLSNRLEHYGVKVK-- 488
T A IL+ + S ++VYVAP+++L E + + G+K++
Sbjct: 1392 TICAEFAILRN-------HQKVPDSVMRVVYVAPIESLAKERYRDWEKKFGG-GLKLRVV 1443
Query: 487 ELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPV 308
EL+G+ + +E+ QII++TPEKWD ++R+ R QLV GP+
Sbjct: 1444 ELTGETATDLKLLEKGQIIISTPEKWDALSRRWKQRKQVQLVSLFIIDELHLIGGQGGPI 1503
Query: 307 LESIIARTVRQIETTKEHIRLVGLSATLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLA 128
LE +++R + IR+V LS +L N +D+ + GLF+F RPVPL
Sbjct: 1504 LEVVVSRMRYIASQVENKIRIVALSTSLANAKDLGEW--IGATSHGLFNFPPGVRPVPLE 1561
Query: 127 QQYIGITVKKPLQRFQLMNDVCYEKVISVA-GKHQVLIFVHSR 2
G+ + R Q M Y ++ A + LIFV +R
Sbjct: 1562 IHIQGVDIANFEARMQAMTKPTYTAIVQHAKNRKPALIFVPTR 1604
>ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase [Populus trichocarpa]
gi|222869248|gb|EEF06379.1| U5 small nuclear
ribonucleoprotein helicase [Populus trichocarpa]
Length = 2157
Score = 808 bits (2087), Expect = 0.0
Identities = 428/614 (69%), Positives = 472/614 (76%), Gaps = 2/614 (0%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDYQXXXXXXXXXXXXX 1658
DEILAVLKN++++ DK+KEIEKLLNPIP F+Q+VSIGRLITDYQ
Sbjct: 147 DEILAVLKNESVRTQDKRKEIEKLLNPIPNNMFEQVVSIGRLITDYQDAGDGAGASVANG 206
Query: 1657 XXXXXXXXXXVXXXXXXXXXXE--SXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDDE 1484
E S GSGAMQMGGGIDDD+
Sbjct: 207 DDALDDGVGVAVEFDEDNEDEEEDSDLDMVPEEEEEEDDVVEPGGSGAMQMGGGIDDDEM 266
Query: 1483 QEANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKLL 1304
EANEG+ LNVQDIDAYWLQRKIS AY+Q+IDPQQ QKLAEEVLKILAEGDDREVETKLL
Sbjct: 267 GEANEGLNLNVQDIDAYWLQRKISLAYEQQIDPQQCQKLAEEVLKILAEGDDREVETKLL 326
Query: 1303 VHLQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHAT 1124
VHLQFDKFSLIK+LLRNRLK+VWCTRLARA EMMGLGPD A ILEQLHAT
Sbjct: 327 VHLQFDKFSLIKFLLRNRLKIVWCTRLARAKDQEERKQIEEEMMGLGPDLAGILEQLHAT 386
Query: 1123 RATAKERQKIVAKNIREEARRLKDETGGDGDRERHQLVDRDADGGWLKGQRQLLDLDSLA 944
RATAKERQK + K+IREEARRLKDETGGDGDR+R LVDRDA+ GW+KGQ Q+LDLDS+A
Sbjct: 387 RATAKERQKNLEKSIREEARRLKDETGGDGDRDRRGLVDRDAESGWVKGQPQMLDLDSIA 446
Query: 943 FHQGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKISDMPDWAQPAF 764
F QGGL MANKKC+LPVGS+++ +KGYEEVHVPALK P+ E+ VKIS+MPDWAQPAF
Sbjct: 447 FEQGGLLMANKKCDLPVGSFKHQKKGYEEVHVPALKQKPIPPDERFVKISEMPDWAQPAF 506
Query: 763 RGMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHSN 584
+GM QLNRVQSKVYETALF A N+LLCAPTGAGKTNVA+LTILQQIALN N DGS N++N
Sbjct: 507 KGMQQLNRVQSKVYETALFKADNVLLCAPTGAGKTNVAVLTILQQIALNRNPDGSFNNNN 566
Query: 583 YKIVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKWDI 404
YKIVYVAPMKALVAEVVGNLSNRL+ YGV+ WDI
Sbjct: 567 YKIVYVAPMKALVAEVVGNLSNRLQEYGVQ---------------------------WDI 599
Query: 403 ITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSATL 224
ITRKSGDRTYTQLVK DNRGPVLESI+ARTVRQIETTKEHIRLVGLSATL
Sbjct: 600 ITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEHIRLVGLSATL 659
Query: 223 PNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVIS 44
PN+EDVA+ LRV+L +KGLFHFDNSYRPVPL+QQYIGI +KKPLQRFQLMND+CYEKV+
Sbjct: 660 PNFEDVALFLRVDL-DKGLFHFDNSYRPVPLSQQYIGINIKKPLQRFQLMNDICYEKVMD 718
Query: 43 VAGKHQVLIFVHSR 2
VAGKHQVLIFVHSR
Sbjct: 719 VAGKHQVLIFVHSR 732
Score = 112 bits (281), Expect = 4e-22
Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 3/283 (1%)
Frame = -3
Query: 841 LKPMPLAAGEQLVKISDMPDWAQPAFRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGK 662
L+P+P+ A P + + ++ N VQ++V+ + N+L+ APTG+GK
Sbjct: 1312 LQPLPVTALRN-------PSY-EALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGK 1363
Query: 661 TNVAMLTILQQIALNMNEDGSINHSNYKIVYVAPMKALVAEVVGNLSNRLEH-YGVKVKE 485
T A IL+ ++ G S + VY+AP++A+ E + + G++V E
Sbjct: 1364 TICAEFAILRN-----HQKGP--ESVMRAVYIAPLEAIARERYRDWERKFGRGLGMRVVE 1416
Query: 484 LSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVL 305
L+G+ + +E+ QII++TPEKWD ++R+ R Y Q V GPVL
Sbjct: 1417 LTGETATDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVL 1476
Query: 304 ESIIARTVRQIETTKEHIRLVGLSATLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQ 125
E I++R + IR+V LS++L N +D+ + GLF+F RPVPL
Sbjct: 1477 EVIVSRMRYIASQIENKIRIVALSSSLANAKDLGEW--IGATSHGLFNFPPGVRPVPLEI 1534
Query: 124 QYIGITVKKPLQRFQLMNDVCYEKVISVA--GKHQVLIFVHSR 2
G+ + R Q M Y ++ A GK ++FV +R
Sbjct: 1535 HIQGVDIANFEARMQAMTKPTYTSIVQHAKNGK-PAIVFVPTR 1576
>ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Cicer arietinum]
gi|502089221|ref|XP_004488846.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like isoform
X2 [Cicer arietinum]
Length = 2187
Score = 805 bits (2080), Expect = 0.0
Identities = 438/625 (70%), Positives = 488/625 (78%), Gaps = 13/625 (2%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDYQXXXXXXXXXXXXX 1658
DEILAVLKNDT+KNPDKKK+IEKLLNPIP FDQLVSIG+LITD+Q
Sbjct: 148 DEILAVLKNDTVKNPDKKKDIEKLLNPIPNHVFDQLVSIGKLITDFQEVSDAVNGSAGGD 207
Query: 1657 XXXXXXXXXXVXXXXXXXXXXE---SXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDD 1487
V E S +GSG MQMGG IDD+D
Sbjct: 208 VDGGLDDDVGVAVEFEENEDDEDEESDLDMVQEEEEDDDDLAEGNGSGGMQMGG-IDDED 266
Query: 1486 EQEANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKL 1307
+EANEGM LNVQDIDAYWLQRKIS A++++IDPQ Q LAEEVLKILAE DDREVE KL
Sbjct: 267 MEEANEGMNLNVQDIDAYWLQRKISDAFERQIDPQHCQTLAEEVLKILAEPDDREVENKL 326
Query: 1306 LVHLQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHA 1127
L HL+FDKFSLIK+LLRNRLK+VWCTRLARA +M G D ILEQLHA
Sbjct: 327 LFHLEFDKFSLIKFLLRNRLKIVWCTRLARAQDQEEREKIEEDMKG--SDLQPILEQLHA 384
Query: 1126 TRATAKERQKIVAKNIREEARRLKDETG-GDGDRERHQ--------LVDRDADGGWLKGQ 974
TRA+AKERQK + K+IREEARRLKD++ GDGD+ER + + DRD + GWLKGQ
Sbjct: 385 TRASAKERQKNLEKSIREEARRLKDDSVVGDGDKERDRDRDRSRRGVGDRDGESGWLKGQ 444
Query: 973 RQLLDLDSLAFHQGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKIS 794
RQ+LDLD+LAF QGGLFMA KKC+LP GSYR+ KGYEE+HVPALK PL E+LVKIS
Sbjct: 445 RQMLDLDNLAFAQGGLFMAKKKCDLPDGSYRHLSKGYEEIHVPALKAKPLDPNEKLVKIS 504
Query: 793 DMPDWAQPAFRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNM 614
MPDWAQPAF+GM+QLNRVQSKVYETALF N+LLCAPTGAGKTNVA+LTILQQIA +
Sbjct: 505 AMPDWAQPAFKGMTQLNRVQSKVYETALFKPDNLLLCAPTGAGKTNVAVLTILQQIARHR 564
Query: 613 N-EDGSINHSNYKIVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQ 437
N DGSI+H+ YKIVYVAPMKALVAEVVGNLSNRLE Y VKV+ELSGDQ+LTRQQIEETQ
Sbjct: 565 NPNDGSIDHTAYKIVYVAPMKALVAEVVGNLSNRLEKYDVKVRELSGDQSLTRQQIEETQ 624
Query: 436 IIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKE 257
IIVTTPEKWDIITRKSGDRTYTQLVK DNRGPVLESI+ARTVRQIETTK+
Sbjct: 625 IIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKD 684
Query: 256 HIRLVGLSATLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQL 77
+IRLVGLSATLPNYEDVA+ LRV+L KGLF+FDNSYRPVPL+QQY+GITVKKPLQRFQL
Sbjct: 685 YIRLVGLSATLPNYEDVALFLRVDL-NKGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQL 743
Query: 76 MNDVCYEKVISVAGKHQVLIFVHSR 2
MND+CYEKV++VAGKHQVLIFVHSR
Sbjct: 744 MNDICYEKVMAVAGKHQVLIFVHSR 768
Score = 108 bits (271), Expect = 6e-21
Identities = 83/278 (29%), Positives = 134/278 (48%), Gaps = 8/278 (2%)
Frame = -3
Query: 811 QLVKISDMPDWA--QPAFRGMSQ----LNRVQSKVYETALFSAVNILLCAPTGAGKTNVA 650
+L+ + +P A P++ + Q N VQ++V+ S N+L+ APTG+GKT A
Sbjct: 1340 ELLDLQPLPVTALRNPSYEALYQEFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICA 1399
Query: 649 MLTILQQIALNMNEDGSINHSNYKIVYVAPMKALVAEVVGNLSNRLEH-YGVKVKELSGD 473
IL+ ++ G S ++VY+AP++AL E + + ++V EL+G+
Sbjct: 1400 EFAILRN-----HQKGP--DSVMRVVYIAPIEALAKERYRDWKKKFGGGLELRVVELTGE 1452
Query: 472 QTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESII 293
+ +E+ QII++TPEKWD ++R+ R + Q V GPVLE I+
Sbjct: 1453 TATDVKLLEKGQIIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIV 1512
Query: 292 ARTVRQIETTKEHIRLVGLSATLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIG 113
+R + IR+V LS +L N +D+ + GLF+F RPVPL G
Sbjct: 1513 SRMRYIASQVENKIRIVALSTSLANAKDLGEW--IGATSHGLFNFPPGVRPVPLEIHIQG 1570
Query: 112 ITVKKPLQRFQLMNDVCYEKVISVA-GKHQVLIFVHSR 2
+ + R Q M Y + A + L+FV +R
Sbjct: 1571 VDIANFEARMQAMTKPTYTAIAQHAKNRKPALVFVPTR 1608
>ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata]
gi|297338984|gb|EFH69401.1| EMB1507 [Arabidopsis lyrata
subsp. lyrata]
Length = 2171
Score = 795 bits (2053), Expect = 0.0
Identities = 418/612 (68%), Positives = 479/612 (78%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDYQXXXXXXXXXXXXX 1658
DEILAVLKNDT +NP+KK EIEKLLN I FDQLVSIG+LITD+Q
Sbjct: 145 DEILAVLKNDTFRNPEKKMEIEKLLNHIENHEFDQLVSIGKLITDFQEGGDSGGGKADEE 204
Query: 1657 XXXXXXXXXXVXXXXXXXXXXESXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDDEQE 1478
V ES +G MQ+ GI+D D +
Sbjct: 205 EGLDDDLGVAVEFEENEEDDDESDPDMVQEEDDEEDEEPTR--TGGMQVDAGINDQDAGD 262
Query: 1477 ANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKLLVH 1298
ANEG LNVQDIDAYWLQRKISQAY+Q+IDPQQ Q LAEE+LK+LAEGDDR VE KLL+H
Sbjct: 263 ANEGANLNVQDIDAYWLQRKISQAYEQQIDPQQCQVLAEELLKVLAEGDDRVVENKLLMH 322
Query: 1297 LQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHATRA 1118
LQF+KFSL+K+LLRNRLKVVWCTRLARA EM GLGP+ AI+EQLHATRA
Sbjct: 323 LQFEKFSLVKFLLRNRLKVVWCTRLARAEDQEERKRIEEEMRGLGPELTAIVEQLHATRA 382
Query: 1117 TAKERQKIVAKNIREEARRLKDETGGDGDRERHQLVDRDADGGWLKGQRQLLDLDSLAFH 938
TAKER++ + K+I EEARRLKDETGGDG R R + DRD++ GW+KGQRQ+LDL+SLAF
Sbjct: 383 TAKEREENLQKSINEEARRLKDETGGDGGRRRRDVADRDSESGWVKGQRQMLDLESLAFD 442
Query: 937 QGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKISDMPDWAQPAFRG 758
QGGL MANKKC+LP GSYR+H KGY+EVHVP + + + E+LVKI++MPDWAQPAF+G
Sbjct: 443 QGGLLMANKKCDLPPGSYRSHGKGYDEVHVPWVSKK-VDSNEKLVKITEMPDWAQPAFKG 501
Query: 757 MSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHSNYK 578
M QLNRVQSKVY+TALF A N+LLCAPTGAGKTNVAMLTILQQ+ +N N+DG+ NH +YK
Sbjct: 502 MQQLNRVQSKVYDTALFKAENLLLCAPTGAGKTNVAMLTILQQLEMNRNKDGTYNHGDYK 561
Query: 577 IVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKWDIIT 398
IVYVAPMKALVAEVVGNLSNRL+ YGV V+ELSGDQ+LT ++IEETQIIVTTPEKWDIIT
Sbjct: 562 IVYVAPMKALVAEVVGNLSNRLKDYGVTVRELSGDQSLTGREIEETQIIVTTPEKWDIIT 621
Query: 397 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSATLPN 218
RKSGDRTYTQLV+ DNRGPVLESI+ART+RQIETTKE+IRLVGLSATLPN
Sbjct: 622 RKSGDRTYTQLVRLLIIDEIHLLHDNRGPVLESIVARTLRQIETTKENIRLVGLSATLPN 681
Query: 217 YEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVISVA 38
YEDVA+ LRV+LK KGLF FD SYRPVPL QQYIGI+VKKPLQRFQLMND+CY+KV++ A
Sbjct: 682 YEDVALFLRVDLK-KGLFKFDRSYRPVPLHQQYIGISVKKPLQRFQLMNDLCYQKVLAGA 740
Query: 37 GKHQVLIFVHSR 2
GKHQVLIFVHSR
Sbjct: 741 GKHQVLIFVHSR 752
Score = 117 bits (294), Expect = 1e-23
Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 2/257 (0%)
Frame = -3
Query: 766 FRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHS 587
++ N VQ++V+ + N+L+ APTG+GKT A IL+ +++G +
Sbjct: 1345 YQDFKHFNPVQTQVFTVLYNTNDNVLVAAPTGSGKTICAEFAILRN-----HQEGP--DA 1397
Query: 586 NYKIVYVAPMKALVAEVVGNLSNRL-EHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKW 410
++VY+AP++A+ E + + G++V EL+G+ L + +E+ QII++TPEKW
Sbjct: 1398 TMRVVYIAPLEAIAKEQFRIWEGKFGKGLGLRVVELTGETALDLKLLEKGQIIISTPEKW 1457
Query: 409 DIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSA 230
D ++R+ R Y Q V GPVLE I++R IR+V LS
Sbjct: 1458 DALSRRWKQRKYVQQVSLFIVDELHLIGGQGGPVLEVIVSRMRYISSQVNNKIRIVALST 1517
Query: 229 TLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKV 50
+L N +D+ + GLF+F RPVPL G+ + R Q M Y +
Sbjct: 1518 SLANAKDLGEW--IGASSHGLFNFPPGVRPVPLEIHIQGVDISSFEARMQAMTKPTYTAI 1575
Query: 49 ISVA-GKHQVLIFVHSR 2
+ A K ++FV +R
Sbjct: 1576 VQHAKNKKPAIVFVPTR 1592
>ref|XP_006416344.1| hypothetical protein EUTSA_v10006525mg [Eutrema salsugineum]
gi|557094115|gb|ESQ34697.1| hypothetical protein
EUTSA_v10006525mg [Eutrema salsugineum]
Length = 2160
Score = 792 bits (2046), Expect = 0.0
Identities = 419/612 (68%), Positives = 478/612 (78%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDYQXXXXXXXXXXXXX 1658
DEILAVLKN+T+KN +KK EIEKLLNPI FDQLVSIG+LITD+Q
Sbjct: 145 DEILAVLKNETVKNIEKKIEIEKLLNPISNQDFDQLVSIGKLITDFQEGGDSGGGKASED 204
Query: 1657 XXXXXXXXXXVXXXXXXXXXXESXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDDEQE 1478
V ES GS MQ+G GI+D+D +
Sbjct: 205 EGLDDDLGVAVEFEENEEDDEESDPDMVQEEDDEEDEEPQRTGS--MQVGAGINDEDAGD 262
Query: 1477 ANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKLLVH 1298
ANEG +LNVQDIDAYWLQRKISQAY+Q+IDPQ Q LAEE+LKILAEGDDR+VE KLLVH
Sbjct: 263 ANEGTSLNVQDIDAYWLQRKISQAYEQQIDPQHCQVLAEELLKILAEGDDRDVENKLLVH 322
Query: 1297 LQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHATRA 1118
LQF+KFSL+K+LLRNR KVVWCTRLARA EM GLGP+ AAI+EQLHATRA
Sbjct: 323 LQFEKFSLVKFLLRNRFKVVWCTRLARAEDQEEKNRIEDEMRGLGPELAAIVEQLHATRA 382
Query: 1117 TAKERQKIVAKNIREEARRLKDETGGDGDRERHQLVDRDADGGWLKGQRQLLDLDSLAFH 938
TAKER++ + K+I EEARRLKDETGGDG R R + D+D + GWLKGQRQ+LDL+SLAF
Sbjct: 383 TAKEREENLQKSINEEARRLKDETGGDGGRGRRDVADKDLESGWLKGQRQMLDLESLAFD 442
Query: 937 QGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKISDMPDWAQPAFRG 758
QGGL MANKKC+LP GSYR+H KGY+EVHVP + + E+LVKI++MP WAQPAF+G
Sbjct: 443 QGGLLMANKKCDLPPGSYRSHAKGYDEVHVPWVS-KKVDINEKLVKITEMPVWAQPAFKG 501
Query: 757 MSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHSNYK 578
M QLNRVQSKVY+TALF A NILLCAPTGAGKTNVAMLTILQQ+ +N N DG+ NH +YK
Sbjct: 502 MQQLNRVQSKVYDTALFKAENILLCAPTGAGKTNVAMLTILQQLEMNRNPDGTYNHGDYK 561
Query: 577 IVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKWDIIT 398
IVYVAPMKALVAEVV NLSNRL+ YGV V+ELSGDQ+L+ ++IEETQIIVTTPEKWDIIT
Sbjct: 562 IVYVAPMKALVAEVVSNLSNRLKDYGVTVRELSGDQSLSGKEIEETQIIVTTPEKWDIIT 621
Query: 397 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSATLPN 218
RKSGDRTYTQLV+ DNRGPVLESI+ART+RQIETTKE+IRLVGLSATLPN
Sbjct: 622 RKSGDRTYTQLVRLLIIDEIHLLHDNRGPVLESIVARTLRQIETTKENIRLVGLSATLPN 681
Query: 217 YEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVISVA 38
YEDVA+ LRV+LK KGLF FD SYRPVPL QQYIGI+VKKPLQRFQLMND+CY+KV++ A
Sbjct: 682 YEDVALFLRVDLK-KGLFKFDRSYRPVPLHQQYIGISVKKPLQRFQLMNDICYQKVLAGA 740
Query: 37 GKHQVLIFVHSR 2
GKHQVLIFVHSR
Sbjct: 741 GKHQVLIFVHSR 752
Score = 119 bits (298), Expect = 4e-24
Identities = 86/283 (30%), Positives = 147/283 (51%), Gaps = 3/283 (1%)
Frame = -3
Query: 841 LKPMPLAAGEQLVKISDMPDWAQPAFRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGK 662
L+P+P+ A PD+ + ++ N VQ++V+ + N+L+ APTG+GK
Sbjct: 1317 LQPLPVTALRN-------PDYER-LYQDFKHFNPVQTQVFTVLYNTNDNVLVAAPTGSGK 1368
Query: 661 TNVAMLTILQQIALNMNEDGSINHSNYKIVYVAPMKALVAEVVGNLSNRL-EHYGVKVKE 485
T A IL+ +++GS + ++VY+AP++A+ E + + G++V E
Sbjct: 1369 TICAEFAILKN-----HQEGS--DATMRVVYIAPLEAIAKEQFRIWERKFGKGLGLRVVE 1421
Query: 484 LSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVL 305
L+G+ TL + +E+ QII++TPEKWD ++R+ R Y Q V + G VL
Sbjct: 1422 LTGETTLDLKLLEKGQIIISTPEKWDALSRRWKQRKYIQQVSLFIVDELHLIGGHGGTVL 1481
Query: 304 ESIIARTVRQIETTKEH-IRLVGLSATLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLA 128
E I++R +R I + ++ IR+V LS +L N +D+ + GLF+F RPVPL
Sbjct: 1482 EVIVSR-MRYISSQGDNKIRIVALSTSLANAKDLGEW--IGASSHGLFNFPPGVRPVPLE 1538
Query: 127 QQYIGITVKKPLQRFQLMNDVCYEKVISVAGKHQ-VLIFVHSR 2
G+ + R Q M Y ++ A ++ ++FV +R
Sbjct: 1539 IHIQGVDISSFEARMQAMTKPTYTAIVQHAKNNKPAIVFVPTR 1581
>ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis
thaliana] gi|334182730|ref|NP_001185050.1| putative U5
small nuclear ribonucleoprotein helicase [Arabidopsis
thaliana] gi|4836892|gb|AAD30595.1|AC007369_5 Putative
RNA helicase [Arabidopsis thaliana]
gi|332191925|gb|AEE30046.1| putative U5 small nuclear
ribonucleoprotein helicase [Arabidopsis thaliana]
gi|332191926|gb|AEE30047.1| putative U5 small nuclear
ribonucleoprotein helicase [Arabidopsis thaliana]
Length = 2171
Score = 791 bits (2042), Expect = 0.0
Identities = 418/612 (68%), Positives = 477/612 (77%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDYQXXXXXXXXXXXXX 1658
DEILAVLKND +NP+KK EIEKLLN I FDQLVSIG+LITD+Q
Sbjct: 145 DEILAVLKNDAFRNPEKKMEIEKLLNKIENHEFDQLVSIGKLITDFQEGGDSGGGRANDD 204
Query: 1657 XXXXXXXXXXVXXXXXXXXXXESXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDDEQE 1478
V ES +G MQ+ GI+D+D +
Sbjct: 205 EGLDDDLGVAVEFEENEEDDEESDPDMVEEDDDEEDDEPTR--TGGMQVDAGINDEDAGD 262
Query: 1477 ANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKLLVH 1298
ANEG LNVQDIDAYWLQRKISQAY+Q+IDPQQ Q LAEE+LKILAEGDDR VE KLL+H
Sbjct: 263 ANEGTNLNVQDIDAYWLQRKISQAYEQQIDPQQCQVLAEELLKILAEGDDRVVEDKLLMH 322
Query: 1297 LQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHATRA 1118
LQ++KFSL+K+LLRNRLKVVWCTRLARA EM GLGP+ AI+EQLHATRA
Sbjct: 323 LQYEKFSLVKFLLRNRLKVVWCTRLARAEDQEERNRIEEEMRGLGPELTAIVEQLHATRA 382
Query: 1117 TAKERQKIVAKNIREEARRLKDETGGDGDRERHQLVDRDADGGWLKGQRQLLDLDSLAFH 938
TAKER++ + K+I EEARRLKDETGGDG R R + DRD++ GW+KGQRQ+LDL+SLAF
Sbjct: 383 TAKEREENLQKSINEEARRLKDETGGDGGRGRRDVADRDSESGWVKGQRQMLDLESLAFD 442
Query: 937 QGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKISDMPDWAQPAFRG 758
QGGL MANKKC+LP GSYR+H KGY+EVHVP + + E+LVKI++MPDWAQPAF+G
Sbjct: 443 QGGLLMANKKCDLPPGSYRSHGKGYDEVHVPWVSKK-VDRNEKLVKITEMPDWAQPAFKG 501
Query: 757 MSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHSNYK 578
M QLNRVQSKVY+TALF A NILLCAPTGAGKTNVAMLTILQQ+ +N N DG+ NH +YK
Sbjct: 502 MQQLNRVQSKVYDTALFKAENILLCAPTGAGKTNVAMLTILQQLEMNRNTDGTYNHGDYK 561
Query: 577 IVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKWDIIT 398
IVYVAPMKALVAEVVGNLSNRL+ YGV V+ELSGDQ+LT ++IEETQIIVTTPEKWDIIT
Sbjct: 562 IVYVAPMKALVAEVVGNLSNRLKDYGVIVRELSGDQSLTGREIEETQIIVTTPEKWDIIT 621
Query: 397 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSATLPN 218
RKSGDRTYTQLV+ DNRGPVLESI+ART+RQIETTKE+IRLVGLSATLPN
Sbjct: 622 RKSGDRTYTQLVRLLIIDEIHLLHDNRGPVLESIVARTLRQIETTKENIRLVGLSATLPN 681
Query: 217 YEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVISVA 38
YEDVA+ LRV+LK KGLF FD SYRPVPL QQYIGI+VKKPLQRFQLMND+CY+KV++ A
Sbjct: 682 YEDVALFLRVDLK-KGLFKFDRSYRPVPLHQQYIGISVKKPLQRFQLMNDLCYQKVLAGA 740
Query: 37 GKHQVLIFVHSR 2
GKHQVLIFVHSR
Sbjct: 741 GKHQVLIFVHSR 752
Score = 116 bits (291), Expect = 3e-23
Identities = 78/257 (30%), Positives = 126/257 (49%), Gaps = 2/257 (0%)
Frame = -3
Query: 766 FRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHS 587
++ N VQ++V+ + N+L+ APTG+GKT A IL+ + +G +
Sbjct: 1345 YQDFKHFNPVQTQVFTVLYNTNDNVLVAAPTGSGKTICAEFAILRN-----HHEGP--DA 1397
Query: 586 NYKIVYVAPMKALVAEVVGNLSNRL-EHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKW 410
++VY+AP++A+ E + + G++V EL+G+ L + +E+ QII++TPEKW
Sbjct: 1398 TMRVVYIAPLEAIAKEQFRIWEGKFGKGLGLRVVELTGETALDLKLLEKGQIIISTPEKW 1457
Query: 409 DIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSA 230
D ++R+ R Y Q V GPVLE I++R IR+V LS
Sbjct: 1458 DALSRRWKQRKYVQQVSLFIVDELHLIGGQHGPVLEVIVSRMRYISSQVINKIRIVALST 1517
Query: 229 TLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKV 50
+L N +D+ + GLF+F RPVPL G+ + R Q M Y +
Sbjct: 1518 SLANAKDLGEW--IGASSHGLFNFPPGVRPVPLEIHIQGVDISSFEARMQAMTKPTYTAI 1575
Query: 49 ISVA-GKHQVLIFVHSR 2
+ A K ++FV +R
Sbjct: 1576 VQHAKNKKPAIVFVPTR 1592
>ref|XP_006306573.1| hypothetical protein CARUB_v10008066mg [Capsella rubella]
gi|482575284|gb|EOA39471.1| hypothetical protein
CARUB_v10008066mg [Capsella rubella]
Length = 2170
Score = 790 bits (2039), Expect = 0.0
Identities = 416/612 (67%), Positives = 476/612 (77%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDYQXXXXXXXXXXXXX 1658
DEILAVLKN+T +NP+KK EIEKLLN I FDQLVSIG+LITD+Q
Sbjct: 145 DEILAVLKNETFRNPEKKMEIEKLLNRIGSQEFDQLVSIGKLITDFQEGGDSGGGKANED 204
Query: 1657 XXXXXXXXXXVXXXXXXXXXXESXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDDDEQE 1478
V ES +G MQ+G GI+D+D +
Sbjct: 205 EGLDDDLGVAVEFEENEEDDEESDPDMVQEEDEEEDEEPTR--TGGMQVGAGINDEDAGD 262
Query: 1477 ANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETKLLVH 1298
NEG LNVQDIDAYWLQRKISQAY+Q+IDPQQ Q LAEE+LK LAEGDDR+VE KLLVH
Sbjct: 263 VNEGTNLNVQDIDAYWLQRKISQAYEQQIDPQQCQVLAEELLKTLAEGDDRDVENKLLVH 322
Query: 1297 LQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMGLGPDHAAILEQLHATRA 1118
LQ++KFSL+K+LL+NRLK+VWCTRLARA EM GLGP+ AI+EQLHATRA
Sbjct: 323 LQYEKFSLVKFLLQNRLKIVWCTRLARAEDQEERNRIEEEMRGLGPELTAIVEQLHATRA 382
Query: 1117 TAKERQKIVAKNIREEARRLKDETGGDGDRERHQLVDRDADGGWLKGQRQLLDLDSLAFH 938
TAKER++ + K+I EEARRLKDETG DG R R + DRD + GW+KGQRQ+LDL+SLAF
Sbjct: 383 TAKEREENLQKSINEEARRLKDETGDDGGRGRRDVADRDLESGWVKGQRQMLDLESLAFD 442
Query: 937 QGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLVKISDMPDWAQPAFRG 758
QGGL MANKKC+LP GSYR+H KGY+EVHVP + + E+LVKI++MPDWAQPAF+G
Sbjct: 443 QGGLLMANKKCDLPPGSYRSHGKGYDEVHVPWVSKK-VDINEKLVKITEMPDWAQPAFKG 501
Query: 757 MSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIALNMNEDGSINHSNYK 578
M QLNRVQSKVYETALF A NILLCAPTGAGKTNVAMLTILQQ+ +N N DG+ NH +YK
Sbjct: 502 MQQLNRVQSKVYETALFKAENILLCAPTGAGKTNVAMLTILQQLEMNRNTDGTYNHGDYK 561
Query: 577 IVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIEETQIIVTTPEKWDIIT 398
IVYVAPMKALVAEVVGNLSNRL+ YGV V+ELSGDQ+LT ++IEETQIIVTTPEKWDIIT
Sbjct: 562 IVYVAPMKALVAEVVGNLSNRLKDYGVTVRELSGDQSLTGREIEETQIIVTTPEKWDIIT 621
Query: 397 RKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIETTKEHIRLVGLSATLPN 218
RKSGDRTYTQLV+ DNRGPVLESI+ART+RQIETTKE+IRLVGLSATLPN
Sbjct: 622 RKSGDRTYTQLVRLLIIDEIHLLHDNRGPVLESIVARTLRQIETTKENIRLVGLSATLPN 681
Query: 217 YEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYEKVISVA 38
YEDVA+ LRV+LK KGLF FD SYRPVPL QQYIGI+VKKPLQRFQLMND+CY+KV++ A
Sbjct: 682 YEDVALFLRVDLK-KGLFKFDRSYRPVPLHQQYIGISVKKPLQRFQLMNDLCYQKVLAGA 740
Query: 37 GKHQVLIFVHSR 2
GKHQVLIFVHSR
Sbjct: 741 GKHQVLIFVHSR 752
Score = 118 bits (295), Expect = 1e-23
Identities = 83/282 (29%), Positives = 138/282 (48%), Gaps = 2/282 (0%)
Frame = -3
Query: 841 LKPMPLAAGEQLVKISDMPDWAQPAFRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGK 662
L+P+P+ A P++ + ++ N VQ++V+ + N+L+ APTG+GK
Sbjct: 1328 LQPLPVTALRN-------PNYER-LYQDFKHFNPVQTQVFTVLYNTNDNVLVAAPTGSGK 1379
Query: 661 TNVAMLTILQQIALNMNEDGSINHSNYKIVYVAPMKALVAEVVGNLSNRL-EHYGVKVKE 485
T A IL+ +++G + ++VY+AP++A+ E + + G++V E
Sbjct: 1380 TICAEFAILRN-----HQEGP---ATMRVVYIAPLEAIAKEQFRIWEKKFGKGLGLRVVE 1431
Query: 484 LSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVL 305
L+G+ L + +E+ QII+TTPEKWD ++R+ R + Q V GPVL
Sbjct: 1432 LTGETALDLKLLEKGQIIITTPEKWDALSRRWKQRKFVQQVSLFIVDELHLIGGRGGPVL 1491
Query: 304 ESIIARTVRQIETTKEHIRLVGLSATLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQ 125
E I++R IR+V LS +L N +D+ + GLF+F RPVPL
Sbjct: 1492 EVIVSRMRYISSQVNNKIRIVALSTSLANAKDLGEW--IGASSHGLFNFPPGVRPVPLEI 1549
Query: 124 QYIGITVKKPLQRFQLMNDVCYEKVISVA-GKHQVLIFVHSR 2
G+ + R Q M Y ++ A K ++FV +R
Sbjct: 1550 HIQGVDISSFEARMQAMTKPTYTAIVQHAKNKKPAIVFVPTR 1591
>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
ribonucleoprotein 200 kDa helicase [Medicago truncatula]
Length = 2223
Score = 788 bits (2034), Expect = 0.0
Identities = 429/628 (68%), Positives = 480/628 (76%), Gaps = 16/628 (2%)
Frame = -3
Query: 1837 DEILAVLKNDTIKNPDKKKEIEKLLNPIPGPTFDQLVSIGRLITDY----QXXXXXXXXX 1670
DEILAVLKNDT+KN DKKK+IEKLLN IP FDQLVSIG+LITD+ +
Sbjct: 151 DEILAVLKNDTLKNVDKKKDIEKLLNTIPNQVFDQLVSIGKLITDFQEVGEVGGGGGGGG 210
Query: 1669 XXXXXXXXXXXXXXVXXXXXXXXXXESXXXXXXXXXXXXXXXXXXDGSGAMQMGGGIDDD 1490
ES +GSG MQMGG IDD+
Sbjct: 211 EVDGGLDDDVGVAVEFEENEDDEDEESDLDVVQEDEEDEDDVVEGNGSGGMQMGG-IDDE 269
Query: 1489 DEQEANEGMTLNVQDIDAYWLQRKISQAYDQKIDPQQSQKLAEEVLKILAEGDDREVETK 1310
D ++ANEGM LNVQDIDAYWLQRKIS AY+Q IDP Q QKLA EVLKILA+ DDREVE K
Sbjct: 270 DMEDANEGMNLNVQDIDAYWLQRKISHAYEQLIDPDQCQKLAGEVLKILADPDDREVENK 329
Query: 1309 LLVHLQFDKFSLIKYLLRNRLKVVWCTRLARAXXXXXXXXXXXEMMG---LGPDHAAILE 1139
LL HL++DKFSLIK+LLRNRLK++WCTRLARA EM L P ILE
Sbjct: 330 LLFHLEYDKFSLIKFLLRNRLKILWCTRLARAQDQEERETIEEEMKESDLLQP----ILE 385
Query: 1138 QLHATRATAKERQKIVAKNIREEARRLKDETGGDGDRERHQ--------LVDRDADGGWL 983
QLHATRA+AKERQK + K+IREEARRLKD+T GDGD+ER + DRD + GWL
Sbjct: 386 QLHATRASAKERQKNLEKSIREEARRLKDDTVGDGDKERDRDRDRIRRGAGDRDGESGWL 445
Query: 982 KGQRQLLDLDSLAFHQGGLFMANKKCELPVGSYRNHRKGYEEVHVPALKPMPLAAGEQLV 803
KGQRQ+LDLD+L F QGGLFMA KKC+LP GSYR+ KGYEE+HVPALK PL E+L+
Sbjct: 446 KGQRQMLDLDNLTFEQGGLFMAKKKCDLPDGSYRHLEKGYEEIHVPALKAKPLDPNEKLL 505
Query: 802 KISDMPDWAQPAFRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGKTNVAMLTILQQIA 623
KIS MPDWAQPAF+GM+QLNRVQSKVYETALF N+LLCAPTGAGKTNVA+LTILQQIA
Sbjct: 506 KISAMPDWAQPAFKGMTQLNRVQSKVYETALFKPDNLLLCAPTGAGKTNVAVLTILQQIA 565
Query: 622 LNMN-EDGSINHSNYKIVYVAPMKALVAEVVGNLSNRLEHYGVKVKELSGDQTLTRQQIE 446
+ N +DGSI+HS YKIVYVAPMKALVAEVVGNLSNRL+ Y V V+ELSGDQ+LTRQQIE
Sbjct: 566 RHRNTDDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQDYNVTVRELSGDQSLTRQQIE 625
Query: 445 ETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPVLESIIARTVRQIET 266
ETQIIVTTPEKWDIITRKSGDRTYTQLVK DNRGPVLESI+ARTVRQIET
Sbjct: 626 ETQIIVTTPEKWDIITRKSGDRTYTQLVKLVIIDEIHLLHDNRGPVLESIVARTVRQIET 685
Query: 265 TKEHIRLVGLSATLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPLAQQYIGITVKKPLQR 86
+K++IRLVGLSATLPNYEDVA+ LRV+L KGLF+FDNSYRPVPL+QQYIGIT+KKPLQR
Sbjct: 686 SKDYIRLVGLSATLPNYEDVALFLRVDL-NKGLFYFDNSYRPVPLSQQYIGITIKKPLQR 744
Query: 85 FQLMNDVCYEKVISVAGKHQVLIFVHSR 2
FQLMND+CY KV+ VAGKHQVLIFVHSR
Sbjct: 745 FQLMNDICYRKVLDVAGKHQVLIFVHSR 772
Score = 111 bits (278), Expect = 9e-22
Identities = 86/284 (30%), Positives = 139/284 (48%), Gaps = 4/284 (1%)
Frame = -3
Query: 841 LKPMPLAAGEQLVKISDMPDWAQPAFRGMSQLNRVQSKVYETALFSAVNILLCAPTGAGK 662
L+P+P+ A P + + ++ N VQ++V+ S N+L+ APTG+GK
Sbjct: 1385 LQPLPVTALRN-------PSY-EALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGK 1436
Query: 661 TNVAMLTILQQIALNMNEDGSINHSNYKIVYVAPMKALVAEVVGNLSNRLEHYGVKVK-- 488
T A IL+ + S ++VY+AP++AL E + + G+K+K
Sbjct: 1437 TICAEFAILRN-------HQKLPDSVMRVVYIAPVEALAKERYRDWEKKFGG-GLKLKVV 1488
Query: 487 ELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKXXXXXXXXXXXDNRGPV 308
EL+G+ + +E+ Q+I++TPEKWD ++R+ R + Q V GPV
Sbjct: 1489 ELTGETATDLKLLEKGQVIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPV 1548
Query: 307 LESIIARTVRQIETTKEH-IRLVGLSATLPNYEDVAVLLRVNLKEKGLFHFDNSYRPVPL 131
LE I++R +R I + E+ IR+V LS +L N +D+ + GLF+F RPVPL
Sbjct: 1549 LEVIVSR-MRYISSQLENKIRIVALSTSLANAKDLGEW--IGATSHGLFNFPPGVRPVPL 1605
Query: 130 AQQYIGITVKKPLQRFQLMNDVCYEKVISVA-GKHQVLIFVHSR 2
G+ + R Q M Y + A K ++FV +R
Sbjct: 1606 EIHIQGVDIANFEARMQAMTKPTYTSIAQHAKNKKPAIVFVPTR 1649