BLASTX nr result
ID: Rehmannia22_contig00009787
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00009787
(392 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS57873.1| hypothetical protein M569_16944, partial [Genlise... 48 3e-09
ref|XP_004245534.1| PREDICTED: high mobility group B protein 13-... 52 3e-08
ref|XP_006343879.1| PREDICTED: high mobility group B protein 6-l... 52 6e-08
gb|EOY24967.1| High mobility group family isoform 1 [Theobroma c... 50 7e-08
gb|EOY24968.1| HMG box protein isoform 2 [Theobroma cacao] 50 7e-08
gb|EXC02935.1| High mobility group B protein 6 [Morus notabilis] 49 3e-07
ref|XP_002273198.1| PREDICTED: high mobility group B protein 13-... 51 6e-07
emb|CBI34461.3| unnamed protein product [Vitis vinifera] 51 6e-07
ref|XP_006573920.1| PREDICTED: high mobility group B protein 13-... 49 6e-07
ref|XP_003525347.1| PREDICTED: high mobility group B protein 6-l... 47 1e-06
ref|XP_002303636.1| high mobility group family protein [Populus ... 46 2e-06
emb|CAN70902.1| hypothetical protein VITISV_028213 [Vitis vinifera] 51 2e-06
gb|EMJ11132.1| hypothetical protein PRUPE_ppa004611mg [Prunus pe... 47 2e-06
ref|XP_003530362.1| PREDICTED: high mobility group B protein 6 i... 47 2e-06
gb|ACU19173.1| unknown [Glycine max] 47 2e-06
ref|XP_002509934.1| transcription factor, putative [Ricinus comm... 45 4e-06
gb|AAS79547.1| At4g11080 [Arabidopsis thaliana] gi|46367464|emb|... 46 4e-06
ref|NP_192846.1| HMG (high mobility group) box protein [Arabidop... 46 4e-06
gb|AAC35540.1| contains similarity to HMG (high mobility group) ... 46 4e-06
ref|XP_004503638.1| PREDICTED: high mobility group B protein 6-l... 45 5e-06
>gb|EPS57873.1| hypothetical protein M569_16944, partial [Genlisea aurea]
Length = 463
Score = 47.8 bits (112), Expect(3) = 3e-09
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCL 185
KE+ K+ G EK E EAM+LLE+EHKQKTA++ L
Sbjct: 207 KEAYFKVTGNEKREQEAMKLLEEEHKQKTALDLL 240
Score = 30.4 bits (67), Expect(3) = 3e-09
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +1
Query: 271 MSAYFIFLNERRAALLGVN 327
MSA+FIF NERRA LL N
Sbjct: 270 MSAFFIFSNERRAGLLSEN 288
Score = 28.1 bits (61), Expect(3) = 3e-09
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 2 PDVGFKDM*NLLGSKWKQ 55
P+ FK+M +LL SKWKQ
Sbjct: 173 PEADFKEMSSLLSSKWKQ 190
>ref|XP_004245534.1| PREDICTED: high mobility group B protein 13-like [Solanum
lycopersicum]
Length = 499
Score = 52.0 bits (123), Expect(2) = 3e-08
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCL 185
KE LKIVG EK EHEAMRLL+DE KQKTAM L
Sbjct: 232 KEVYLKIVGMEKREHEAMRLLDDEQKQKTAMELL 265
Score = 31.6 bits (70), Expect(2) = 3e-08
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1
Query: 265 QHMSAYFIFLNERRAALLGVN 327
Q +SA+F+F NERRAALL N
Sbjct: 294 QPLSAFFLFTNERRAALLAEN 314
>ref|XP_006343879.1| PREDICTED: high mobility group B protein 6-like [Solanum tuberosum]
Length = 500
Score = 52.0 bits (123), Expect(2) = 6e-08
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCL 185
KE LKIVG EK EHEAMRLL+DE KQKTAM L
Sbjct: 233 KEVYLKIVGMEKREHEAMRLLDDEQKQKTAMELL 266
Score = 30.4 bits (67), Expect(2) = 6e-08
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 265 QHMSAYFIFLNERRAALLGVN 327
Q +SA+F+F NERR+ALL N
Sbjct: 295 QPLSAFFLFTNERRSALLAEN 315
>gb|EOY24967.1| High mobility group family isoform 1 [Theobroma cacao]
Length = 502
Score = 49.7 bits (117), Expect(2) = 7e-08
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCL 185
KE+ L+++ KEK E EAM+LLEDEHKQKTAM L
Sbjct: 236 KEAYLQVIAKEKRECEAMKLLEDEHKQKTAMELL 269
Score = 32.3 bits (72), Expect(2) = 7e-08
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1
Query: 265 QHMSAYFIFLNERRAALLGVN 327
Q MSA+F+F NERRAALL N
Sbjct: 297 QPMSAFFLFSNERRAALLAEN 317
>gb|EOY24968.1| HMG box protein isoform 2 [Theobroma cacao]
Length = 370
Score = 49.7 bits (117), Expect(2) = 7e-08
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCL 185
KE+ L+++ KEK E EAM+LLEDEHKQKTAM L
Sbjct: 236 KEAYLQVIAKEKRECEAMKLLEDEHKQKTAMELL 269
Score = 32.3 bits (72), Expect(2) = 7e-08
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1
Query: 265 QHMSAYFIFLNERRAALLGVN 327
Q MSA+F+F NERRAALL N
Sbjct: 297 QPMSAFFLFSNERRAALLAEN 317
>gb|EXC02935.1| High mobility group B protein 6 [Morus notabilis]
Length = 499
Score = 48.5 bits (114), Expect(2) = 3e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCL 185
KE+ L+++ KEK E EAM+L EDEHKQKTAM L
Sbjct: 236 KEAYLQVIAKEKRETEAMKLFEDEHKQKTAMELL 269
Score = 31.2 bits (69), Expect(2) = 3e-07
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1
Query: 265 QHMSAYFIFLNERRAALLGVN 327
Q MSA+F+F NERRA LL N
Sbjct: 297 QPMSAFFLFTNERRATLLAEN 317
>ref|XP_002273198.1| PREDICTED: high mobility group B protein 13-like [Vitis vinifera]
Length = 505
Score = 50.8 bits (120), Expect(2) = 6e-07
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCL 185
KE+ L+IVGKEK E+EAMRLLE+E KQKTAM L
Sbjct: 237 KEAYLQIVGKEKRENEAMRLLEEEQKQKTAMELL 270
Score = 28.1 bits (61), Expect(2) = 6e-07
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 271 MSAYFIFLNERRAALLG 321
+SA+F+F ERRAALLG
Sbjct: 300 VSAFFLFSKERRAALLG 316
>emb|CBI34461.3| unnamed protein product [Vitis vinifera]
Length = 386
Score = 50.8 bits (120), Expect(2) = 6e-07
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCL 185
KE+ L+IVGKEK E+EAMRLLE+E KQKTAM L
Sbjct: 118 KEAYLQIVGKEKRENEAMRLLEEEQKQKTAMELL 151
Score = 28.1 bits (61), Expect(2) = 6e-07
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 271 MSAYFIFLNERRAALLG 321
+SA+F+F ERRAALLG
Sbjct: 181 VSAFFLFSKERRAALLG 197
>ref|XP_006573920.1| PREDICTED: high mobility group B protein 13-like [Glycine max]
Length = 350
Score = 48.9 bits (115), Expect(2) = 6e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCL 185
KE+ L+++ KEKHE E+MRLLEDE KQ+TAM L
Sbjct: 121 KEAYLQVIAKEKHETESMRLLEDEQKQRTAMELL 154
Score = 30.0 bits (66), Expect(2) = 6e-07
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1
Query: 271 MSAYFIFLNERRAALLGVN 327
MSAYF+F N+RRAAL N
Sbjct: 184 MSAYFLFTNDRRAALAAEN 202
>ref|XP_003525347.1| PREDICTED: high mobility group B protein 6-like [Glycine max]
Length = 473
Score = 47.4 bits (111), Expect(2) = 1e-06
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCL 185
KE+ L+++ KEK E EAMRLLEDE KQKTAM L
Sbjct: 206 KEAYLQMIAKEKRETEAMRLLEDEQKQKTAMELL 239
Score = 30.8 bits (68), Expect(2) = 1e-06
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 271 MSAYFIFLNERRAALLGVN 327
MSAYF+F N+RRAAL+ N
Sbjct: 269 MSAYFLFTNDRRAALVAEN 287
>ref|XP_002303636.1| high mobility group family protein [Populus trichocarpa]
gi|222841068|gb|EEE78615.1| high mobility group family
protein [Populus trichocarpa]
Length = 480
Score = 45.8 bits (107), Expect(2) = 2e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCL 185
KE+ LK++ KEK E EAM+LLE+E KQKTAM L
Sbjct: 212 KEAYLKVMTKEKRESEAMKLLEEEQKQKTAMELL 245
Score = 31.6 bits (70), Expect(2) = 2e-06
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1
Query: 265 QHMSAYFIFLNERRAALLGVN 327
Q +SA+F+F NERRAALL N
Sbjct: 275 QPLSAFFLFCNERRAALLAEN 295
>emb|CAN70902.1| hypothetical protein VITISV_028213 [Vitis vinifera]
Length = 532
Score = 50.8 bits (120), Expect(2) = 2e-06
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCL 185
KE+ L+IVGKEK E+EAMRLLE+E KQKTAM L
Sbjct: 237 KEAYLQIVGKEKRENEAMRLLEEEQKQKTAMELL 270
Score = 26.2 bits (56), Expect(2) = 2e-06
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 271 MSAYFIFLNERRAALLGVN 327
+SA+F+F ERRAALL +
Sbjct: 300 VSAFFLFSKERRAALLXEB 318
>gb|EMJ11132.1| hypothetical protein PRUPE_ppa004611mg [Prunus persica]
Length = 500
Score = 47.0 bits (110), Expect(2) = 2e-06
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCL 185
KE+ L++ KEK E EAM LLE+EHKQKTAM L
Sbjct: 232 KEAYLQVTAKEKRESEAMHLLEEEHKQKTAMELL 265
Score = 30.0 bits (66), Expect(2) = 2e-06
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 265 QHMSAYFIFLNERRAALL 318
Q MSA+F+F NERRAAL+
Sbjct: 293 QPMSAFFLFTNERRAALV 310
>ref|XP_003530362.1| PREDICTED: high mobility group B protein 6 isoform 1 [Glycine max]
Length = 478
Score = 47.0 bits (110), Expect(2) = 2e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCL 185
KE+ L+++ KEK E EAMRLLEDE KQ+TAM L
Sbjct: 208 KEAYLQVIAKEKRETEAMRLLEDEQKQRTAMELL 241
Score = 30.0 bits (66), Expect(2) = 2e-06
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1
Query: 271 MSAYFIFLNERRAALLGVN 327
MSAYF+F N+RRAAL N
Sbjct: 271 MSAYFLFTNDRRAALAAEN 289
>gb|ACU19173.1| unknown [Glycine max]
Length = 478
Score = 47.0 bits (110), Expect(2) = 2e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCL 185
KE+ L+++ KEK E EAMRLLEDE KQ+TAM L
Sbjct: 208 KEAYLQVIAKEKRETEAMRLLEDEQKQRTAMELL 241
Score = 30.0 bits (66), Expect(2) = 2e-06
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1
Query: 271 MSAYFIFLNERRAALLGVN 327
MSAYF+F N+RRAAL N
Sbjct: 271 MSAYFLFTNDRRAALAAEN 289
>ref|XP_002509934.1| transcription factor, putative [Ricinus communis]
gi|223549833|gb|EEF51321.1| transcription factor,
putative [Ricinus communis]
Length = 514
Score = 45.1 bits (105), Expect(2) = 4e-06
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCL 185
KE L++V KEK E EAM+LLE+E KQKTAM L
Sbjct: 252 KEVYLQVVNKEKRESEAMKLLEEEQKQKTAMELL 285
Score = 31.2 bits (69), Expect(2) = 4e-06
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1
Query: 265 QHMSAYFIFLNERRAALLGVN 327
Q MSA+F+F NERRA+LL N
Sbjct: 313 QPMSAFFLFSNERRASLLAEN 333
>gb|AAS79547.1| At4g11080 [Arabidopsis thaliana] gi|46367464|emb|CAG25858.1|
hypothetical protein [Arabidopsis thaliana]
Length = 450
Score = 46.2 bits (108), Expect(2) = 4e-06
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCLN 188
KE+ L+++ KEK E EAM+LL+DE KQKTAM L+
Sbjct: 190 KEAYLQVITKEKREREAMKLLDDEQKQKTAMELLD 224
Score = 30.0 bits (66), Expect(2) = 4e-06
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1
Query: 265 QHMSAYFIFLNERRAALLGVN 327
Q +SAY I+ NERRAAL G N
Sbjct: 252 QPISAYLIYANERRAALKGEN 272
>ref|NP_192846.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266789|sp|Q9T012.1|HMG13_ARATH RecName: Full=High
mobility group B protein 13; AltName:
Full=Nucleosome/chromatin assembly factor group D 13
gi|4850287|emb|CAB43043.1| 98b like protein [Arabidopsis
thaliana] gi|7267807|emb|CAB81209.1| 98b like protein
[Arabidopsis thaliana] gi|22136604|gb|AAM91621.1|
putative 98b protein [Arabidopsis thaliana]
gi|332657570|gb|AEE82970.1| HMG (high mobility group)
box protein [Arabidopsis thaliana]
Length = 446
Score = 46.2 bits (108), Expect(2) = 4e-06
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCLN 188
KE+ L+++ KEK E EAM+LL+DE KQKTAM L+
Sbjct: 186 KEAYLQVITKEKREREAMKLLDDEQKQKTAMELLD 220
Score = 30.0 bits (66), Expect(2) = 4e-06
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1
Query: 265 QHMSAYFIFLNERRAALLGVN 327
Q +SAY I+ NERRAAL G N
Sbjct: 248 QPISAYLIYANERRAALKGEN 268
>gb|AAC35540.1| contains similarity to HMG (high mobility group) box (Pfam:
HMG_box.hmm, scores: 70.67, 53.09 and 80.15)
[Arabidopsis thaliana]
Length = 401
Score = 46.2 bits (108), Expect(2) = 4e-06
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCLN 188
KE+ L+++ KEK E EAM+LL+DE KQKTAM L+
Sbjct: 198 KEAYLQVITKEKREREAMKLLDDEQKQKTAMELLD 232
Score = 30.0 bits (66), Expect(2) = 4e-06
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1
Query: 265 QHMSAYFIFLNERRAALLGVN 327
Q +SAY I+ NERRAAL G N
Sbjct: 260 QPISAYLIYANERRAALKGEN 280
>ref|XP_004503638.1| PREDICTED: high mobility group B protein 6-like [Cicer arietinum]
Length = 466
Score = 44.7 bits (104), Expect(2) = 5e-06
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +3
Query: 84 KESCLKIVGKEKHEHEAMRLLEDEHKQKTAMNCL 185
KE+ L+++ KEK E EAM+LLE+E KQKTAM L
Sbjct: 196 KEAYLQVITKEKRETEAMKLLEEEQKQKTAMELL 229
Score = 31.2 bits (69), Expect(2) = 5e-06
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +1
Query: 271 MSAYFIFLNERRAALLGVNGLASDGVLE 354
MSAYF++ N+RRAA+L N GVLE
Sbjct: 259 MSAYFLYTNDRRAAILAEN----KGVLE 282