BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00009732
         (4075 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   674   0.0  
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   655   0.0  
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   565   e-158
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       562   e-157
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   559   e-156
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...   532   e-148
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   518   e-144
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   517   e-143
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   514   e-142
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   503   e-139
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           503   e-139
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]              486   e-134
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00...   482   e-133
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   481   e-132
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   448   e-123
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   436   e-119
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   432   e-118
emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]   419   e-114
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               419   e-114
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...   410   e-111

>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  674 bits (1739), Expect = 0.0
 Identities = 370/1104 (33%), Positives = 579/1104 (52%), Gaps = 19/1104 (1%)
 Frame = +2

Query: 500  MIIATWNIRGFNSPLKQDEVFNLIREKNIDVFGLLETKASQQTINKFVDNRLNGWSSCNN 679
            M I TWN+RG N P+K  EV + +  + I +  L ET+  QQ   K      N WS  NN
Sbjct: 1    MKITTWNVRGLNDPIKVKEVKHFLHSQKISLCSLFETRVRQQNSGKIQKKFGNRWSWINN 60

Query: 680  FDLVKGGRIAIFWNMAKVNIEVIGFHPQVIHTLATCKITQRIFFVSFVYGLHSVGDRKPL 859
            +     GRI + W    VNI V+    QVI           +F ++ VYGLH++ DRK L
Sbjct: 61   YACSPRGRIWVGWLNNDVNINVLSVTEQVITMEVKNSYGLNMFKMAAVYGLHTIADRKVL 120

Query: 860  WEELNRIKQIVGRAWLIMGDFNSILNSNERRNGVPIQPRDIKDFVNCSSVLGLMDLPSTG 1039
            WEEL     +     +++GD+N++ ++ +R NG  +   +  D  +      L++ P+TG
Sbjct: 121  WEELYNFVSVCHEPCILIGDYNAVYSAQDRLNGNDVSEAETSDLRSFVLKAQLLEAPTTG 180

Query: 1040 HFFTWTNNTVW-----SKLDRAMVDNDWIMENPHAAAHFLPSGLSDHSPCVVNITNASAA 1204
             F++W N ++      S++D++ V+  WI + P     +  +G+SDHSP + N+      
Sbjct: 181  LFYSWNNKSIGADRISSRIDKSFVNVAWINQYPDVVVEYREAGISDHSPLIFNLATQHDE 240

Query: 1205 GKTPWRFFNMWTEHDEFMATVRDKWDITIWGTAQFRLRTK-----LRELKSCLKTLNDKH 1369
            G  P++F N   + + F+  V++ W     G+A  R + K     L+ +K  LK+ + K 
Sbjct: 241  GGRPFKFLNFLADQNGFVEVVKEAW-----GSANHRFKMKNIWVRLQAVKRALKSFHSKK 295

Query: 1370 FXXXXXXXXXXXXXXXXXXXGLHDDPNNQEIANILPALRERSSFL---SNAEKQFFRQKA 1540
            F                    +   P   +++ +    ++  + L   S  ++   +QK+
Sbjct: 296  FSKAHCQVEELRRKLA----AVQALPEVSQVSELQEEEKDLIAQLRKWSTIDESILKQKS 351

Query: 1541 KSKFIIHSDKCSKFFHAIVKRNAKRNFISSLTRDDGTLTNSTEQVVGEFLGFYKGLLGTA 1720
            + +++   D  SKFF   +K    RN I  L  D G       ++  E   FY+ LLGT+
Sbjct: 352  RIQWLSLGDSNSKFFFTAIKVRKARNKIVLLQNDRGDQLTENTEIQNEICNFYRRLLGTS 411

Query: 1721 Q-HTQHIDEDVINNGPLLAAENWDSLLRAVSKEEISYALNDVEYDKSPGPDGFSSKFFKK 1897
                + ID  V+  G  L+A +   L++ ++ +EI  AL D++  K+PG DGF+S FFKK
Sbjct: 412  SSQLEAIDLHVVRVGAKLSATSCAQLVQPITIQEIDQALADIDDTKAPGLDGFNSVFFKK 471

Query: 1898 AWNIVGVDFTEAINEFFVSGRLLKEWNHVTVALIPKTAHSPKVGDFRPISCCNVFYKVLS 2077
            +W ++  +  E I +FF +G + K  N   V LIPK   +    D+RPI+CC+  YK++S
Sbjct: 472  SWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYRPIACCSTLYKIIS 531

Query: 2078 KILATRLSSVLDGIIDGAQAAFVKGRSMVDNIHLMQELLRSYNRKRTTPRCTLKIDLRKA 2257
            KIL  RL +V+  ++D AQ  F+  R + DNI L  EL+R YNR+  +PRC +K+D+RKA
Sbjct: 532  KILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKA 591

Query: 2258 FDSVSWTFLREVLDGLGFPPRFVRWVMECVTTASYSLSINXXXXXXXXXXXXXRQGDPLS 2437
            +DSV W FL  +L  LGFP  F+RW+M CV T SYS+ +N             RQGDPLS
Sbjct: 592  YDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDPLS 651

Query: 2438 PYLFVICLEYLSRLIRKKTTNTHFNFHPKCGPLNITHLAFADDLMMLSRGDPISVKILLD 2617
            P+LF + +EYLSR +     +  FNFHPKC  + +THL FADDL+M +R D  S+  ++ 
Sbjct: 652  PFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMA 711

Query: 2618 CLDDFGSKSGLKMNILKSNIFMAGIKERDSLNILSFSQLTQGSMPFRYLGIPLAAERLKV 2797
              + F   SGL+ +I KS I+  G+   ++  +    Q+  GS+PFRYLG+PLA+++L  
Sbjct: 712  AFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNF 771

Query: 2798 AHYEELIAKIREYISGWSASTLSYAGRTELIRSVVQGVECFWLSIFPIPNSVRDKIIQIC 2977
            +  + LI KI     GW A  LSYAGR +L+++++  ++ +W  IFP+P  +   +   C
Sbjct: 772  SQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTC 831

Query: 2978 RNFLW----GTGGKAHIAWTTICLPKDEGGLGIRDLQAWNHSLLAKTLWNIHARKDSLWY 3145
            R FLW     T  KA +AW  +  PK  GGL + ++  WN + + K LW I  ++D LW 
Sbjct: 832  RKFLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWV 891

Query: 3146 RWIHHYYLHNRPFRDWTVARSDSNLIKNIYSIRTQILHKYGGNWQKTEQQLVNWHSNHQV 3325
            RW++ YY+  +   + TV+ + S +++ I+  R ++L + GG W+          SNH  
Sbjct: 892  RWVNAYYIKRQNIENVTVSSNTSWILRKIFESR-ELLTRTGG-WEAV--------SNHMN 941

Query: 3326 KGPKNVYNFFRDAGTKKPWAGIVWASGITPKHSFTLWLAAHKRIQTKDRLGHLELE-DGT 3502
               K  Y   ++      W  ++  +  TPK  F LWLA   R+ T +R+     +    
Sbjct: 942  FSIKKTYKLLQEDYENVVWKRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVSPL 1001

Query: 3503 CNFCAAQPETAAHLFFNCPFSAAIWDGIKEWTGISRQMTTLSSAFKWLKKEARGTSKKSK 3682
            C  C  + ET  HLFFNC +S  IW  +  +  +  Q    +     +KK AR T  ++K
Sbjct: 1002 CKMCGNEIETIQHLFFNCIYSKEIWGKVLLYLNLQPQADAQAKKELAIKK-ARSTKDRNK 1060

Query: 3683 GQKIAMATTVYQIWNARNRLIFEG 3754
               +    +VY IW  RN  +F G
Sbjct: 1061 LYVMMFTESVYAIWLLRNAKVFRG 1084


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  655 bits (1690), Expect = 0.0
 Identities = 382/1126 (33%), Positives = 573/1126 (50%), Gaps = 29/1126 (2%)
 Frame = +2

Query: 500  MIIATWNIRGFNSPLKQDEVFNLIREKNIDVFGLLETKASQQTINKFVDNRLNGWSSCNN 679
            M+  +WN+RG N P K  E+ N +    I V  LLET+  +Q  +K        W   NN
Sbjct: 1    MLCVSWNVRGMNDPFKIKEIKNFLYSHKIVVCALLETRVREQNASKVQGKLGKDWKWLNN 60

Query: 680  FDLVKGGRIAIFWNMAKVNIEVIGFHPQVIHTLATCKITQRIFFVSFV--YGLHSVGDRK 853
            +      RI I W  A VN+ +     Q    L  C I  +   +  V  YGLH++ DRK
Sbjct: 61   YSHSARERIWIGWRPAWVNVTLTHTQEQ----LMVCDIQDQSHKLKMVAVYGLHTIADRK 116

Query: 854  PLWEELNRIKQIVGRAWLIMGDFNSILNSNERRNGVPIQPRDIKDFVNCSSVLGLMDLPS 1033
             LW  L +  Q      +I+GDFN++ +SN+R  G  +   + +DF        L++  S
Sbjct: 117  SLWSGLLQCVQQQD-PMIIIGDFNAVCHSNDRLYGTLVTDAETEDFQQFLLQSNLIESRS 175

Query: 1034 TGHFFTWTNNT-----VWSKLDRAMVDNDWIMENPHAAAHFLPSGLSDHSPCVVNITNAS 1198
            T  +++W+N++     V S++D+A V+  W+      +  +LP G+SDHSP + N+    
Sbjct: 176  TWSYYSWSNSSIGRDRVLSRIDKAYVNLVWLGMYAEVSVQYLPPGISDHSPLLFNLMTGR 235

Query: 1199 AAGKTPWRFFNMWTEHDEFMATVRDKWDIT--------IWGTAQFRLRTKLRELKSCLKT 1354
              G  P++F N+  E  EF+ TV   W+          IW      L+   RELK  +KT
Sbjct: 236  PQGGKPFKFMNVMAEQGEFLETVEKAWNSVNGRFKLQAIW----LNLKAVKRELKQ-MKT 290

Query: 1355 LNDKHFXXXXXXXXXXXXXXXXXXXGLHDDPNNQEIANILPALRERSSFLSNAEKQFFRQ 1534
                                       H+D    +  +I+  LR      S+ E    +Q
Sbjct: 291  QKIGLAHEKVKNLRHQLQDLQSQDDFDHNDIMQTDAKSIMNDLRH----WSHIEDSILQQ 346

Query: 1535 KAKSKFIIHSDKCSKFFHAIVKRNAKRNFISSLTRDDGTLTNSTEQVVGEFLGFYKGLLG 1714
            K++  ++   D  SK F   VK     N I  L  +DG +    ++V  E L FYK LLG
Sbjct: 347  KSRITWLQQGDTNSKLFFTAVKARHAINRIDMLNTEDGRVIQDADEVQEEILEFYKKLLG 406

Query: 1715 TAQHT-QHIDEDVINNGPLLAAENWDSLLRAVSKEEISYALNDVEYDKSPGPDGFSSKFF 1891
            T   T   +D + +  G  L+A+  +SL+R V+  EI  AL  +  DK+PG DGF++ FF
Sbjct: 407  TRASTLMGVDLNTVRGGKCLSAQAKESLIREVASTEIDEALAGIGNDKAPGLDGFNAYFF 466

Query: 1892 KKAWNIVGVDFTEAINEFFVSGRLLKEWNHVTVALIPKTAHSPKVGDFRPISCCNVFYKV 2071
            KK+W  +  +    I EFF + R+ +  N + V L+PK  H+ +V +FRPI+CC V YK+
Sbjct: 467  KKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIACCTVIYKI 526

Query: 2072 LSKILATRLSSVLDGIIDGAQAAFVKGRSMVDNIHLMQELLRSYNRKRTTPRCTLKIDLR 2251
            +SK+L  R+  ++  +++ AQ+ F+ GR + DNI L  EL+R Y RK  +PRC +K+D+R
Sbjct: 527  ISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIR 586

Query: 2252 KAFDSVSWTFLREVLDGLGFPPRFVRWVMECVTTASYSLSINXXXXXXXXXXXXXRQGDP 2431
            KA+DSV W+FL  +L   GFP RFV W+MECV+T SYS+ +N             RQGDP
Sbjct: 587  KAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDP 646

Query: 2432 LSPYLFVICLEYLSRLIRKKTTNTHFNFHPKCGPLNITHLAFADDLMMLSRGDPISVKIL 2611
            +SP+LF +C+EYLSR + +   +  FNFHPKC  LNITHL FADDL+M  R D  S+  +
Sbjct: 647  MSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHM 706

Query: 2612 LDCLDDFGSKSGLKMNILKSNIFMAGIKERDSLNILSFSQLTQGSMPFRYLGIPLAAERL 2791
                  F   SGL  +  KSNI+  G+ +  +  +  +  +  G +PFRYLG+PL +++L
Sbjct: 707  NVAFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKL 766

Query: 2792 KVAHYEELIAKIREYISGWSASTLSYAGRTELIRSVVQGVECFWLSIFPIPNSVRDKIIQ 2971
              A  + L+  I      W A  LSYAGR +LI+S++  ++ +W  IFP+   V   + +
Sbjct: 767  TYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEK 826

Query: 2972 ICRNFLWGTG-----GKAHIAWTTICLPKDEGGLGIRDLQAWNHSLLAKTLWNIHARKDS 3136
            +CR FLW TG      KA +AW TI  PK  GG  + +++ WN + + K LW I  ++D 
Sbjct: 827  VCRKFLW-TGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDK 885

Query: 3137 LWYRWIHHYYLHNRPFRDWTVARSDSNLIKNIYSIRTQILHKYGGNWQKTEQQLVNWHSN 3316
            LW RWIH YY+  +      ++   + +++ I   R  + +   G+W +           
Sbjct: 886  LWVRWIHSYYIKRQDILTVNISNQTTWILRKIVKARDHLSNI--GDWDEI--------CI 935

Query: 3317 HQVKGPKNVYNFFRDAGTKKPWAGIVWASGITPKHSFTLWLAAHKRIQTKDRLGHLELE- 3493
                  K  Y    + G +  W  ++  +  TPK  F LW+  H+R+ T DR+    ++ 
Sbjct: 936  GDKFSMKKAYKKISENGERVRWRRLICNNYATPKSKFILWMMLHERLPTVDRISRWGVQC 995

Query: 3494 DGTCNFCAAQPETAAHLFFNCPFSAAIWDGI-----KEWTGISRQMTTLSSAFKWLKKEA 3658
            D     C    ET  HLFF+C +SA +W  I        +G+S Q    S          
Sbjct: 996  DLNYRLCRNDGETIQHLFFSCSYSAGVWSKICYIMRFPNSGVSHQEIISSVC-------- 1047

Query: 3659 RGTSKKSKGQKIAMATT--VYQIWNARNRLIFEGEVLHIDFVIHKI 3790
             G ++K KG+ I M  T  VY IW  RN+  F GE    + V+ KI
Sbjct: 1048 -GQARKKKGKLIVMLYTEFVYAIWKQRNKRTFTGENKDENEVLRKI 1092


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  565 bits (1457), Expect = e-158
 Identities = 335/1000 (33%), Positives = 514/1000 (51%), Gaps = 19/1000 (1%)
 Frame = +2

Query: 512  TWNIRGFNSPLKQDEVFNLIREKNIDVFGLLETKASQQTINKFVDNRLNGWSSCNNFDLV 691
            +WN+RGFN+ +++       +        +LET+  +    + + +   GW S  N++  
Sbjct: 6    SWNVRGFNNSVRRRNFRKWFKLSKALFGSILETRVKEHRARRSLLSSFPGWKSVCNYEFA 65

Query: 692  KGGRIAIFWNMAKVNIEVIGFHPQVIHTLATCKITQRIFFVSFVYGLHSVGDRKPLWEEL 871
              GRI + W+ A V + V+    Q I            F V+FVY ++    R+ LW EL
Sbjct: 66   ALGRIWVVWDPA-VEVTVLSKSDQTISCTVKLPHISTEFVVTFVYAVNCRYGRRRLWSEL 124

Query: 872  NRI---KQIVGRAWLIMGDFNSILNSNERRNGVPIQPRDIKDFVNCSSVLGLMDLPSTGH 1042
              +   +    + W+I+GDFN  L+  +   G     R +++F  C     + DLP  G+
Sbjct: 125  ELLAANQTTSDKPWIILGDFNQSLDPVDASTGGSRITRGMEEFRECLLTSNISDLPFRGN 184

Query: 1043 FFTW----TNNTVWSKLDRAMVDNDWIMENPHAAAHFLPSGLSDHSPCVVNITNASAAGK 1210
             +TW     NN +  K+DR +V++ W++ +P +   F     SDH P  VNI+N S    
Sbjct: 185  HYTWWNNQENNPIAKKIDRILVNDSWLIASPLSYGSFCAMEFSDHCPSCVNISNQSGGRN 244

Query: 1211 TPWRFFNMWTEHDEFMATVRDKWD-ITIWGTAQFRLRTKLRELKSCLKTLNDKHFXXXXX 1387
             P++  N    H EF+  +R  WD +   G+A F L  K + LK  ++T N +H+     
Sbjct: 245  KPFKLSNFLMHHPEFIEKIRVTWDRLAYQGSAMFTLSKKSKFLKGTIRTFNREHYSGLEK 304

Query: 1388 XXXXXXXXXXXXXXGLHDDPNNQEIANILPALRERSSFLSNAEKQFFRQKAKSKFIIHSD 1567
                           L   P++  +A +        + L+ AE++F  QK++  ++   D
Sbjct: 305  RVVQAAQNLKTCQNNLLAAPSSY-LAGLEKEAHRSWAELALAEERFLCQKSRVLWLKCGD 363

Query: 1568 KCSKFFHAIVKRNAKRNFISSLTRDDGTLTNSTEQVVGEFLGFYKGLLGTAQHTQHID-- 1741
              + FFH ++      N I  L    G    +T+++    + F+K L G++ H    +  
Sbjct: 364  SNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQTHCVDFFKELFGSSSHLISAEGI 423

Query: 1742 EDVINNGPLLAAENWDSLLRA-VSKEEISYALNDVEYDKSPGPDGFSSKFFKKAWNIVGV 1918
              + +       EN   LL A VS+ +I      +  +KSPGPDG++S+FFKK W+IVG 
Sbjct: 424  SQINSLTRFKCDENTRQLLEAEVSEADIKSEFFALPSNKSPGPDGYTSEFFKKTWSIVGP 483

Query: 1919 DFTEAINEFFVSGRLLKEWNHVTVALIPKTAHSPKVGDFRPISCCNVFYKVLSKILATRL 2098
                A+ EFF SGRLL +WN   V ++PK  ++ ++ +FRPISCCN  YKV+SK+LA RL
Sbjct: 484  SLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRITEFRPISCCNAIYKVISKLLARRL 543

Query: 2099 SSVLDGIIDGAQAAFVKGRSMVDNIHLMQELLRSYNRKRTTPRCTLKIDLRKAFDSVSWT 2278
             ++L   I  +Q+AFVKGR + +N+ L  EL++ + +   + R  LK+DLRKAFDSV W 
Sbjct: 544  ENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQANISSRGVLKVDLRKAFDSVGWG 603

Query: 2279 FLREVLDGLGFPPRFVRWVMECVTTASYSLSINXXXXXXXXXXXXXRQGDPLSPYLFVIC 2458
            F+ E L     PPRFV W+ +C+T+ S+S++++             RQGDPLSP LFVI 
Sbjct: 604  FIIETLKAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKGLRQGDPLSPSLFVIA 663

Query: 2459 LEYLSRLIRKKTTNTHFNFHPKCGPLNITHLAFADDLMMLSRGDPISVKILLDCLDDFGS 2638
            +E LSRL+  K ++    +HPK   + I+ LAFADDLM+   G   S++ +   L+ F +
Sbjct: 664  MEILSRLLENKFSDGSIGYHPKASEVRISSLAFADDLMIFYDGKASSLRGIKSVLESFKN 723

Query: 2639 KSGLKMNILKSNIFMAGIKERDSLNILSFSQLTQGSMPFRYLGIPLAAERLKVAHYEELI 2818
             SGL+MN  KS ++ AG+++ D  + L+F     G+ PFRYLG+PL   +L+ + Y +LI
Sbjct: 724  LSGLEMNTEKSAVYTAGLEDTDKEDTLAFG-FVNGTFPFRYLGLPLLHRKLRRSDYSQLI 782

Query: 2819 AKIREYISGWSASTLSYAGRTELIRSVVQGVECFWLSIFPIPNSVRDKIIQICRNFLWGT 2998
             KI    + W+  TLS+AGR +LI SV+     FWLS F +P      I Q+C  FLWG 
Sbjct: 783  DKIAARFNHWATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNRFLWGN 842

Query: 2999 G----GKAHIAWTTICLPKDEGGLGIRDLQAWNHSLLAKTLWNIHARKDSLWYRWIHHYY 3166
                 G   ++W   CLPK EGGLG+R+   WN +L  + +W + AR+DSLW  W H   
Sbjct: 843  DITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHANR 902

Query: 3167 LHNRPFRDWTVARSDSNLIKNIYSIR---TQILHKYGGNWQKTEQQLVNWHSNHQVKGPK 3337
            L +  F +   A   S + K I  +R    + L    GN     Q L  W+ +    GP 
Sbjct: 903  LRHVNFWNAEAASHHSWIWKAILGLRPLAKRFLRGAVGN----GQLLSYWYDHWSNLGP- 957

Query: 3338 NVYNFFRDAGTKKP-WAGIVWASGITPKHSFTLWLAAHKR 3454
                     G   P   GI  ++ +T   S T W+    R
Sbjct: 958  ----LIEAIGASGPQLTGIHESAVVTEASSSTGWILPSAR 993



 Score = 72.4 bits (176), Expect = 2e-09
 Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
 Frame = +2

Query: 3335 KNVYNFFRDAGTKKPWAGIVWASGITPKHSFTLWLAAHKRIQTKDRLGHLEL-EDGTCNF 3511
            K  +   R   T K WA  VW  G  PK++F  W+A   R+  + R  H        C  
Sbjct: 1036 KLTWECLRQRDTTKLWAAAVWYKGCIPKYAFNFWVAHLNRLPVRARTTHWSTNRPSLCCV 1095

Query: 3512 CAAQPETAAHLFFNCPFSAAIWDGIKEWTGISRQMTTLSSAFKWLKKEARGTSKKSKGQK 3691
            C  + ET  HLF +C   + IW  +    G S+         +W+       S   K  K
Sbjct: 1096 CQRETETRDHLFIHCTLGSLIWQQVLARFGRSQMFREWKDIIEWMLSNQGSFSGTLK--K 1153

Query: 3692 IAMATTVYQIWNARN 3736
            +A+ T ++ IW  RN
Sbjct: 1154 LAVQTAIFHIWKERN 1168


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  562 bits (1449), Expect = e-157
 Identities = 371/1180 (31%), Positives = 568/1180 (48%), Gaps = 103/1180 (8%)
 Frame = +2

Query: 515  WNIRGFNSPLKQDEVFNLIREKNIDVFGLLETKASQQTINKFVDNRLNGWSSCNNFDLVK 694
            WNIRGFN+   +      ++       G++ET   Q    KF++  L GWS   N+    
Sbjct: 8    WNIRGFNNVSHRSGFKKWVKANKPIFGGVIETHVKQPKDRKFINALLPGWSFVENYAFSD 67

Query: 695  GGRIAIFWNMAKVNIEVIGFHPQVIHTLATCKI----TQRIFFVSFVYGLHSVGDRKPLW 862
             G+I + W+ + V + V+    Q+I    TC++    +     VS VY  + V  RK LW
Sbjct: 68   LGKIWVMWDPS-VQVVVVAKSLQMI----TCEVLLPGSPSWIIVSVVYAANEVASRKELW 122

Query: 863  EELNR--IKQIVG-RAWLIMGDFNSILNSNERRNGVPIQPR-DIKDFVNCSSVLGLMDLP 1030
             E+    +  I+G R WL++GDFN +LN  E  N V +    +++DF +C     L DL 
Sbjct: 123  IEIVNMVVSGIIGDRPWLVLGDFNQVLNPQEHSNPVSLNVDINMRDFRDCLLAAELSDLR 182

Query: 1031 STGHFFTWTNNT----VWSKLDRAMVDNDWIMENPHAAAHFLPSGLSDHSPCVVNITNAS 1198
              G+ FTW N +    V  K+DR +V++ W    P +   F     SDH  C V +   S
Sbjct: 183  YKGNTFTWWNKSHTTPVAKKIDRILVNDSWNALFPSSLGIFGSLDFSDHVSCGVVLEETS 242

Query: 1199 AAGKTPWRFFNMWTEHDEFMATVRDKW-DITIWGTAQFRLRTKLRELKSCLKTLNDKHFX 1375
               K P++FFN   ++ +F+  VRD W  + + G++ FR+  KL+ LK  +K  +  ++ 
Sbjct: 243  IKAKRPFKFFNYLLKNLDFLNLVRDNWFTLNVVGSSMFRVSKKLKALKKPIKDFSRLNYS 302

Query: 1376 XXXXXXXXXXXXXXXXXXGLHDDPNNQEIANILPALRERSSFLSNAEKQFFRQKAKSKFI 1555
                                  DP     +  L A R +   L+ AE+ FFRQK++  + 
Sbjct: 303  ELEKRTKEAHDFLIGCQDRTLADPTPINASFELEAER-KWHILTAAEESFFRQKSRISWF 361

Query: 1556 IHSDKCSKFFHAIVKRNAKRNFISSLTRDDGTLTNSTEQVVGEFLGFYKGLLGTAQHTQH 1735
               D  +K+FH +       N IS+L   +G L +S E ++     ++  LLG       
Sbjct: 362  AEGDGNTKYFHRMADARNSSNSISALYDGNGKLVDSQEGILDLCASYFGSLLGDEVDPYL 421

Query: 1736 IDEDVINN------GPLLAAENWDSLLRAVSKEEISYALNDVEYDKSPGPDGFSSKFFKK 1897
            ++++ +N        P    E    L    S E+I  AL  +  +KS GPDGF+++FF  
Sbjct: 422  MEQNDMNLLLSYRCSPAQVCE----LESTFSNEDIRAALFSLPRNKSCGPDGFTAEFFID 477

Query: 1898 AWNIVGVDFTEAINEFFVSGRLLKEWNHVTVALIPKTAHSPKVGDFRPISCCNVFYKVLS 2077
            +W+IVG + T+AI EFF SG LLK+WN  T+ LIPK  +     DFRPISC N  YKV++
Sbjct: 478  SWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRPISCLNTLYKVIA 537

Query: 2078 KILATRLSSVLDGIIDGAQAAFVKGRSMVDNIHLMQELLRSYNRKRTTPRCTLKIDLRKA 2257
            ++L  RL  +L G+I  AQ+AF+ GRS+ +N+ L  +L+  YN    +PR  LK+DL+KA
Sbjct: 538  RLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPRGMLKVDLKKA 597

Query: 2258 FDSVSWTFLREVLDGLGFPPRFVRWVMECVTTASYSLSINXXXXXXXXXXXXXRQGDPLS 2437
            FDSV W F+   L  L  P +F+ W+ +C++T ++++SIN             RQGDPLS
Sbjct: 598  FDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQGDPLS 657

Query: 2438 PYLFVICLEYLSRLIRKKTTNTHFNFHPKCGPLNITHLAFADDLMMLSRGDPISVKILLD 2617
            PYLFV+ +E  S L+  +  +   ++HPK   L+I+HL FADD+M+   G   S+  + +
Sbjct: 658  PYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVMIFFDGGSFSLHGICE 717

Query: 2618 CLDDFGSKSGLKMNILKSNIFMAGIKERDSLNILSFSQLTQGSMPFRYLGIPLAAERLKV 2797
             LDDF S SGLK+N  KS++++AG+ + +S N  +      G++P RYLG+PL   +L++
Sbjct: 718  TLDDFASWSGLKVNKDKSHLYLAGLNQLES-NANAAYGFPIGTLPIRYLGLPLMNRKLRI 776

Query: 2798 AHYEELIAKIREYISGWSASTLSYAGRTELIRSVVQGVECFWLSIFPIPNSVRDKIIQIC 2977
            A YE L+ KI      W    LS+AGR +LI SV+ G   FW+S F +P     +I  +C
Sbjct: 777  AEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLC 836

Query: 2978 RNFLWGTGGKA----HIAWTTICLPKDEGGLGIRDLQA----------WNHSLLAKTLWN 3115
              FLW    +      ++W  +CLPK EGGLG+R L            W   +   +LW 
Sbjct: 837  SRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWA 896

Query: 3116 I-----HARKDSLWY-------RWIHHYYLHNRP-------------------FRDWTVA 3202
                  H  + S W         W     L  RP                   + +WT  
Sbjct: 897  DWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNGLKADYWYDNWTSL 956

Query: 3203 RSDSNLIKNI--YSIRTQILHKYGG-----NWQ----------------------KTEQQ 3295
                 +I +I   S+R  +L K         W+                       T Q+
Sbjct: 957  GPLFRIIGDIGPSSLRVPLLAKVASAFSEDGWRLPVSRSAPAKGIHDHLCTVPVPSTAQE 1016

Query: 3296 LVN---WHSNH---QVKGPKNVYNFFRDAGTKKPWAGIVWASGITPKHSFTLWLAAHKRI 3457
             V+   W  N    Q       +   R   T K WA  +W  G  PK++F +W++   R+
Sbjct: 1017 DVDRYEWSVNGFLCQGFSAAKTWEAIRPKATVKSWASSIWFKGAVPKYAFNMWVSHLNRL 1076

Query: 3458 QTKDRL---GHLELEDGTCNFCAAQPETAAHLFFNCPFSAAIWDGI-KEWTGISRQMTTL 3625
             T+ RL   GH++ +   C  C+   E+  HL   C FSA +W  + +      R  ++ 
Sbjct: 1077 LTRQRLASWGHIQSD--ACVLCSFASESRDHLLLICEFSAQVWRLVFRRICPRQRLFSSW 1134

Query: 3626 SSAFKWLKKEARGTSKKSKGQKIAMATTVYQIWNARNRLI 3745
            S    W+++ +       +  KI     VY +W  RN L+
Sbjct: 1135 SELLSWVRQSSPEAPPLLR--KIVSQVVVYNLWRQRNNLL 1172


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  559 bits (1440), Expect = e-156
 Identities = 366/1187 (30%), Positives = 553/1187 (46%), Gaps = 113/1187 (9%)
 Frame = +2

Query: 515  WNIRGFNSPLKQDEVFNLIREKNIDVFGLLETKASQQTINKFVDNRLNGWSSCNNFDLVK 694
            WN+RG N   K   +   I E N     L+ET+  +  +++ V      WS   N++  +
Sbjct: 6    WNVRGLNKSSKHSVIKKWIEENNFQFGCLVETRVKESKVSQLVGKLFKDWSILTNYEHNR 65

Query: 695  GGRIAIFWNMAKVNIEVIGFHPQVIHTLATCKITQRIFFVSFVYGLHSVGDRKPLWEELN 874
             GRI + W    V +  I    Q++      +  Q  FF SFVY  + V +RK LW EL 
Sbjct: 66   RGRIWVLWRK-NVRLSPIYKSCQLLTCSVKLEDRQDEFFCSFVYASNYVEERKVLWSELK 124

Query: 875  RIKQ---IVGRAWLIMGDFNSILNSNERRNGV--PIQPRDIKDFVNCSSVLGLMDLPSTG 1039
                   I  + W ++GDFN  L+  E       P+    ++DF    +   L D+ + G
Sbjct: 125  DHYDSPIIRHKPWTLLGDFNETLDIAEHSQSFVHPMVTPGMRDFQQVINYCSLTDMAAQG 184

Query: 1040 HFFTWTNNT----VWSKLDRAMVDNDWIMENPHAAAHFLPSGLSDHSPCVVNITNASA-- 1201
              FTW N      +  KLDR ++++ W      + + F   G SDH  C +++ + +   
Sbjct: 185  PLFTWCNKREHGLIMKKLDRVLINDCWNQTFSQSYSVFEAGGCSDHLRCRISLNSEAGNK 244

Query: 1202 -AGKTPWRFFNMWTEHDEFMATVRDKWDIT----IWGTAQFRLRTKLRELKSCLKTLNDK 1366
              G  P++F N  T+ ++F   V   W  T    +  +  FR    L+ LK  ++++   
Sbjct: 245  VQGLKPFKFVNALTDMEDFKPMVSTYWKDTEPLILSTSTLFRFSKNLKGLKPKIRSMARD 304

Query: 1367 HFXXXXXXXXXXXXXXXXXXXGLHDDPNNQ--EIANILPALRERSSFLSNAEKQFFRQKA 1540
                                     +P++   E  N   +  +R + L   E+++ +QK+
Sbjct: 305  RLGNLSKKANEAYKILCAKQHVNLTNPSSMAMEEENAAYSRWDRVAIL---EEKYLKQKS 361

Query: 1541 KSKFIIHSDKCSKFFHAIVKRNAKRNFISSLTRDDGTLTNSTEQVVGEFLGFYKGLLGTA 1720
            K  +    D+ +K FH         N I  +  +DG +    +++  E   F++  L   
Sbjct: 362  KLHWCQVGDQNTKAFHRAAAAREAHNTIREILSNDGIVKTKGDEIKAEAERFFREFL--- 418

Query: 1721 QHTQHIDED-----VINNGPLLAAENWD----SLLRAVSKEEISYALNDVEYDKSPGPDG 1873
               Q I  D     +     LL     D    SL+R V+ EEI   L  +  DKSPGPDG
Sbjct: 419  ---QLIPNDFEGVTITELQQLLPVRCSDADQQSLIRPVTAEEIRKVLFRMPSDKSPGPDG 475

Query: 1874 FSSKFFKKAWNIVGVDFTEAINEFFVSGRLLKEWNHVTVALIPKTAHSPKVGDFRPISCC 2053
            ++S+FFK  W I+G +FT A+  FF  G L K  N   +ALIPK   + ++ D+RPISCC
Sbjct: 476  YTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCC 535

Query: 2054 NVFYKVLSKILATRLSSVLDGIIDGAQAAFVKGRSMVDNIHLMQELLRSYNRKRTTPRCT 2233
            NV YKV+SKI+A RL  VL   I G Q+AFVK R +++N+ L  EL++ Y++   + RC 
Sbjct: 536  NVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCA 595

Query: 2234 LKIDLRKAFDSVSWTFLREVLDGLGFPPRFVRWVMECVTTASYSLSINXXXXXXXXXXXX 2413
            +KID+ KAFDSV W FL  V   LGFP  F+ W+  C+TTAS+S+ +N            
Sbjct: 596  IKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQSSRG 655

Query: 2414 XRQGDPLSPYLFVICLEYLSRLIRKKTTNTHFNFHPKCGPLNITHLAFADDLMMLSRGDP 2593
             RQG  LSPYLFVIC++ LS+++ K     HF +HPKC  + +THL+FADDLM+LS G  
Sbjct: 656  LRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKI 715

Query: 2594 ISVKILLDCLDDFGSKSGLKMNILKSNIFMAGIKERDSLNILSFSQLTQGSMPFRYLGIP 2773
             S++ ++   D+F   SGL++++ KS +++AG+       +      + G +P RYLG+P
Sbjct: 716  RSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLP 775

Query: 2774 LAAERLKVAHYEELIAKIREYISGWSASTLSYAGRTELIRSVVQGVECFWLSIFPIPNSV 2953
            L  +RL       L+ ++R+ I  W++  LSYAGR  LI SV+  +  FWL+ F +P   
Sbjct: 776  LITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKC 835

Query: 2954 RDKIIQICRNFLWG----TGGKAHIAWTTICLPKDEGGLGIRDLQAWNHSLLAKTLWNIH 3121
              ++ ++C  FLW        KA I+W  +C PKDEGGLG+R L+  N     K +W I 
Sbjct: 836  IRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIV 895

Query: 3122 ARKDSLWYRWIHHYYLHNRPFRDWTVARSDS-------NLIKNIYSIRTQILHKYGG--- 3271
            +  +SLW +W+  + L N  F  W V ++ S        L+K     +T    + G    
Sbjct: 896  SHSNSLWVKWVDQHLLRNASF--WEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGNGKQ 953

Query: 3272 ------NWQKTEQQLVN--------------------WHSNHQVKGPKNVYNFFRDA--- 3364
                  NW    Q L                      W +  Q +   +VYN   DA   
Sbjct: 954  TSFWYDNWSDLGQLLERTGDRGLIDLGISRRMTVEEAWTNRRQRRHRNDVYNVIEDALKK 1013

Query: 3365 -------------------------------------GTKKPWAGIVWASGITPKHSFTL 3433
                                                   + PW  ++W S  TPK+SF  
Sbjct: 1014 SWDTRTETEDKVLWRGKSDVFRTTFSTRDTWHHTRSTSARVPWHKVIWFSHATPKYSFCS 1073

Query: 3434 WLAAHKRIQTKDRLGHLELEDGT-CNFCAAQPETAAHLFFNCPFSAAIWDGIKEWTGISR 3610
            WLAAH R+ T DR+ +      T C FC    ET  HLFF C F++ I      W  ++R
Sbjct: 1074 WLAAHGRLPTGDRMINWANGIATDCIFCQGTLETRDHLFFTCSFTSVI------WVDLAR 1127

Query: 3611 QMTTLSSAFKWLK-KEARGTSKKSKGQ----KIAMATTVYQIWNARN 3736
             +        W    EA   S+  + +    +     T+Y +W  RN
Sbjct: 1128 GIFKTQYTSHWQSIIEAITNSQHHRVEWFLRRYVFQATIYIVWRERN 1174


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score =  532 bits (1371), Expect = e-148
 Identities = 306/912 (33%), Positives = 477/912 (52%), Gaps = 17/912 (1%)
 Frame = +2

Query: 500  MIIATWNIRGFNSPLKQDEVFNLIREKNIDVFGLLETKASQQTINKFVDNRLNGWSSCNN 679
            M +  WNIRG NS  +Q  V + I   N+ V   LET  +Q+  N  + + L GW   +N
Sbjct: 1    MKVFCWNIRGLNSRNRQRVVRSWIASNNLLVGCFLETHVAQENANSVLASTLPGWRMDSN 60

Query: 680  FDLVKGGRIAIFWNMAKVNIEVIGFHPQVIHTLATCKITQRIFFVSFVYGLHSVGDRKPL 859
            +   + GRI I W+ + +++ V     Q++          + F V+FVYG +S  DR+ L
Sbjct: 61   YCCSELGRIWIVWDPS-ISVLVFKRTDQIMFCSIKIPSLLQSFAVAFVYGRNSELDRRSL 119

Query: 860  WEE---LNRIKQIVGRAWLIMGDFNSILNSNERR--NGVPIQPRDIKDFVNCSSVLGLMD 1024
            WE+   L+R   +    WL++GDFN I  ++E    N   +  R ++D   C     L D
Sbjct: 120  WEDILVLSRTSPLSVTPWLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSD 179

Query: 1025 LPSTGHFFTWTN----NTVWSKLDRAMVDNDWIMENPHAAAHFLPSGLSDHSPCVVNITN 1192
            LPS G FFTW+N    N +  KLDRA+ + +W    P A A F P G SDH+PC++ I N
Sbjct: 180  LPSRGVFFTWSNHQQDNPILRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIILIDN 239

Query: 1193 ASAAGKTPWRFFNMWTEHDEFMATVRDKWDI-TIWGTAQFRLRTKLRELKSCLKTLNDKH 1369
                 K  +++F+  + H  ++A +   W+  T+ G+  F LR  L+  K C +TLN   
Sbjct: 240  QPPPSKKSFKYFSFLSSHPSYLAALSTAWEANTLVGSHMFSLRQHLKVAKLCCRTLNRLR 299

Query: 1370 FXXXXXXXXXXXXXXXXXXXGLHDDPNNQEIANILPALRERSSFLSNAEKQFFRQKAKSK 1549
            F                    L   P++        A R++  F + A + FFRQK++ +
Sbjct: 300  FSNIQQRTAQSLTRLEDIQVELLTSPSDTLFRREHVA-RKQWIFFAAALESFFRQKSRIR 358

Query: 1550 FIIHSDKCSKFFHAIVKRNAKRNFISSLTRDDGTLTNSTEQVVGEFLGFYKGLLGTAQH- 1726
            ++   D  ++FFH  V  +   N I  L  DDG    + +Q+ G  + +Y  LLG     
Sbjct: 359  WLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAYYSHLLGIPSEN 418

Query: 1727 -TQHIDEDVINNGPLLAAENWDSLLRAV-SKEEISYALNDVEYDKSPGPDGFSSKFFKKA 1900
             T    E +    P        S L  + S+EEI+  L  +  +K+PGPDGF  +FF +A
Sbjct: 419  VTPFSVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVLFSMPRNKAPGPDGFPVEFFIEA 478

Query: 1901 WNIVGVDFTEAINEFFVSGRLLKEWNHVTVALIPKTAHSPKVGDFRPISCCNVFYKVLSK 2080
            W IV      AI EFF+SG L + +N   + LIPK   + ++  FRP++CC   YKV+++
Sbjct: 479  WAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTGADRLTQFRPVACCTTIYKVITR 538

Query: 2081 ILATRLSSVLDGIIDGAQAAFVKGRSMVDNIHLMQELLRSYNRKRTTPRCTLKIDLRKAF 2260
            I++ RL   +D  +   Q  F+KGR + +N+ L  EL+ ++     T R  L++D+ KA+
Sbjct: 539  IISRRLKLFIDQAVQANQVGFIKGRLLCENVLLASELVDNFEADGETTRGCLQVDISKAY 598

Query: 2261 DSVSWTFLREVLDGLGFPPRFVRWVMECVTTASYSLSINXXXXXXXXXXXXXRQGDPLSP 2440
            D+V+W FL  +L  L  P  F+ W+  C+++ASYS++ N             RQGDP+S 
Sbjct: 599  DNVNWEFLINILKALDLPLVFIHWIWVCISSASYSIAFNGELIGFFQGKKGIRQGDPMSS 658

Query: 2441 YLFVICLEYLSRLIRKKTTNTHFNFHPKCGPLNITHLAFADDLMMLSRGDPISVKILLDC 2620
            +LFV+ ++ LS+ +     N  FN HP C    ITHL+FADD+++ S G   S+  +L  
Sbjct: 659  HLFVLVMDVLSKSLDLGALNGLFNLHPNCLAPIITHLSFADDVLVFSDGAASSIAGILTI 718

Query: 2621 LDDFGSKSGLKMNILKSNIFMAGIKERDSLNILSFSQLTQGSMPFRYLGIPLAAERLKVA 2800
            LDDF   SGL +N  K+ + + G     + ++     +T GS+P RYLG+PL +++++  
Sbjct: 719  LDDFRQGSGLGINREKTELLLDGGNFARNRSLADNLGITHGSLPVRYLGVPLMSQKMRRQ 778

Query: 2801 HYEELIAKIREYISGWSASTLSYAGRTELIRSVVQGVECFWLSIFPIPNSVRDKIIQICR 2980
             Y+ L+ +I    + W+A  LS+AGR +L++SV+     FW S+F  PN    K+ Q+C 
Sbjct: 779  DYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYSTINFWASVFIFPNQCLQKLEQMCN 838

Query: 2981 NFLW----GTGGKAHIAWTTICLPKDEGGLGIRDLQAWNHSLLAKTLWNIHARKDSLWYR 3148
             FLW     +   A I+W  +C PK+ GGLG++ L +WN  L  K +W +     SLW  
Sbjct: 839  AFLWSGAPNSARGAKISWNIVCSPKEAGGLGLKRLSSWNRILALKLIWLLFTSAGSLWVS 898

Query: 3149 WIHHYYLHNRPF 3184
            W+  + +  R F
Sbjct: 899  WVRLHLIGRRNF 910


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  518 bits (1334), Expect = e-144
 Identities = 351/1109 (31%), Positives = 537/1109 (48%), Gaps = 41/1109 (3%)
 Frame = +2

Query: 536  SPLKQDEVFNLIREKNIDV----FG-LLETKASQQTINKFVDNRLNGWSSCNNFDLVKGG 700
            S  K  +  ++  +K  DV    FG +LET+  +  +          W   +N++  + G
Sbjct: 310  SSKKAHKFVSVPNQKATDVLPRQFGCVLETRVIESKVPVIFAKVFKDWQMVSNYEFNRLG 369

Query: 701  RIAIFWNMAKVNIEVIGFHPQVIHTLATCKITQRIFFVSFVYGLHSVGDRKPLWEELNRI 880
            RI + W+ + V ++VI    Q+I  L   +     F  SF+Y  + V +RK LW++L+ +
Sbjct: 370  RIWVVWS-SSVQLQVIFKSSQMIVCLVRVEHYDVEFICSFIYASNFVEERKKLWQDLHNL 428

Query: 881  KQIVG---RAWLIMGDFNSILNSNERRNGV--PIQPRDIKDFVNCSSVLGLMDLPSTGHF 1045
            +  V    + WL+ GDFN  L   E  +    P+    ++DF        L D+ + G  
Sbjct: 429  QNSVAFRNKPWLLFGDFNETLKMEEHSSYAVSPMVTPGMRDFQIVVRYCSLEDMRTHGPL 488

Query: 1046 FTWTNNT----VWSKLDRAMVDNDWIMENPHAAAHFLPSGLSDHSPCVVNITNASAAGKT 1213
            FTW N      +  KLDR +++ ++    PH+       G SDH     ++ +A    K 
Sbjct: 489  FTWGNKRNEGLICKKLDRVLLNPEYNSAYPHSYCIMDSGGCSDHLRGRFHLRSAIQKPKG 548

Query: 1214 PWRFFNMWTEHDEFMATVRDKWDITIW----GTAQFRLRTKLRELKSCLKTLNDKHFXXX 1381
            P++F N+   H EFM  V D W  T       +  FR   KL+ELK  LK L+       
Sbjct: 549  PFKFTNVIAAHPEFMPKVEDFWKNTTELFPSTSTLFRFSKKLKELKPILKDLS------- 601

Query: 1382 XXXXXXXXXXXXXXXXGLHDDPNNQEIANILPALRERSSFLSNAEKQFFRQKAKSKFIIH 1561
                                        N L  L  R+++   A ++  R + KS   ++
Sbjct: 602  ---------------------------RNNLSDLTRRATY---AYEELCRCQTKSLTTLN 631

Query: 1562 SDKC---SKFFHAIVKRNAKRNFISSLTRDDGTLTNSTEQVVGEFLGFYKGLLGTAQHTQ 1732
                   S  F    K     N I  +    GT   + + +  E + F+  LL ++Q + 
Sbjct: 632  PHDIVDESLAFERWEKERHLLNAIHEVMDPQGTRPPNQDDIKIEAVRFFSDLL-SSQPSD 690

Query: 1733 HIDEDVINNGPLL----AAENWDSLLRAVSKEEISYALNDVEYDKSPGPDGFSSKFFKKA 1900
                 V     +L    +    + L+  +++ E+      +  +KSPGPDG++ +FF++ 
Sbjct: 691  FTGISVDELKGILQYRYSLHEQNLLVAEITEAEVMKVFFSIPLNKSPGPDGYTVEFFRET 750

Query: 1901 WNIVGVDFTEAINEFFVSGRLLKEWNHVTVALIPKTAHSPKVGDFRPISCCNVFYKVLSK 2080
            W+++G + T AI  FF  G L K  N   +ALIPK  ++ ++ D+RPISCCNV YK +SK
Sbjct: 751  WSVIGQEVTMAIKSFFTYGFLPKGLNSTILALIPKRTYAKEMKDYRPISCCNVLYKAISK 810

Query: 2081 ILATRLSSVLDGIIDGAQAAFVKGRSMVDNIHLMQELLRSYNRKRTTPRCTLKIDLRKAF 2260
            +LA RL  +L   I   Q+AF+  R +++N+ L  EL++ Y++   +PRC +KIDL KAF
Sbjct: 811  LLANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDYHKDGLSPRCAMKIDLSKAF 870

Query: 2261 DSVSWTFLREVLDGLGFPPRFVRWVMECVTTASYSLSINXXXXXXXXXXXXXRQGDPLSP 2440
            DSV W FL   L  L  P +F+ W+  C++TAS+S+ +N             RQG  LSP
Sbjct: 871  DSVQWPFLLNTLAALDIPEKFIHWINLCISTASFSVQVN-----------GLRQGCSLSP 919

Query: 2441 YLFVICLEYLSRLIRKKTTNTHFNFHPKCGPLNITHLAFADDLMMLSRGDPISVKILLDC 2620
            YLFVIC+  LS ++ K      F +HP+C  + +THL FADD+M+ S G   S++ +L  
Sbjct: 920  YLFVICMNVLSAMLDKGAVEKRFGYHPRCRNMGLTHLCFADDIMVFSAGSAHSLEGVLAI 979

Query: 2621 LDDFGSKSGLKMNILKSNIFMAGIKERDSLNILSFSQLTQGSMPFRYLGIPLAAERLKVA 2800
              DF + SGL +++ KS +FMA I      +IL+      GS+P RYLG+PL  +R+ +A
Sbjct: 980  FKDFAAFSGLNISLEKSTLFMASISSETCASILARFPFDSGSLPVRYLGLPLMTKRMTLA 1039

Query: 2801 HYEELIAKIREYISGWSASTLSYAGRTELIRSVVQGVECFWLSIFPIPNSVRDKIIQICR 2980
                L+ KIR  IS W    LSYAGR +L+ SV+  +  FW+S F +P +   +I QI  
Sbjct: 1040 DCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPRACIREIEQISA 1099

Query: 2981 NFLW-GTG---GKAHIAWTTICLPKDEGGLGIRDLQAWNHSLLAKTLWNIHARKDSLWYR 3148
             FLW GT     KA +AW  +C PK EGGLG+R L   N     K +W + + K SLW  
Sbjct: 1100 AFLWSGTDLNPHKAKVAWHDVCKPKSEGGLGLRSLVDANKICCFKLIWRLVSAKHSLWVN 1159

Query: 3149 WIHHYYLHNRPFRDWTVARSDSNLIKNIYSIRTQILHKYGGNWQK-------TEQQLVNW 3307
            WI +  +        TVA + S+  +   S R  IL+      +K       TEQ     
Sbjct: 1160 WIQNNLIR-------TVAEALSSHRRR--SHRDDILNDIEEELEKLLCRGICTEQDRSLC 1210

Query: 3308 HS-NHQVKG---PKNVYNFFRDAGTKKPWAGIVWASGITPKHSFTLWLAAHKRIQTKDRL 3475
             S   Q K       +++  R+ G  K W   +W SG TPK +F  WLAAH R+ T D++
Sbjct: 1211 RSIGGQFKAKFFSPEIWHQIREQGLVKQWHKAIWFSGATPKFTFISWLAAHDRLTTGDKM 1270

Query: 3476 GHLELE-DGTCNFCAAQPETAAHLFFNCPFSAAIWDGIKEWTGISRQMTTLSSAFKWLKK 3652
                      C  C    E+  HLFF+C FS+ IWD +     + R  T   +    L  
Sbjct: 1271 ASWNRGISSVCVLCNISAESRDHLFFSCNFSSHIWDRLTRRLLLCRYTTNFPALLLLLSG 1330

Query: 3653 EARGTSKKSKGQKIAMATTVYQIWNARNR 3739
            +    +K+   + +  A T++ +W  RN+
Sbjct: 1331 QDFSGTKRFLLRYVFQA-TIHTLWRERNK 1358


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 893

 Score =  517 bits (1331), Expect = e-143
 Identities = 313/898 (34%), Positives = 475/898 (52%), Gaps = 22/898 (2%)
 Frame = +2

Query: 515  WNIRGFNSPLKQDEVFNLIREKNIDVFG-LLETKASQQTINKFVDNRLNGWSSCNNFDLV 691
            WN+RGFN    +   F      N  +FG L+ET   Q    KF+ N L GWS   N++  
Sbjct: 8    WNVRGFNISSHR-RGFKKWFLLNKPLFGGLIETHVKQPKEKKFISNLLPGWSFVENYEFS 66

Query: 692  KGGRIAIFWNMAKVNIEVIGFHPQVIHTLATCKITQRIFFVSFVYGLHSVGDRKPLWEEL 871
              G+I + W+ + V + VIG   Q+I        +   F VS VY  +  G RK LW EL
Sbjct: 67   VLGKIWVLWDPS-VKVVVIGRSLQMITCELLLPDSPSWFVVSIVYASNEEGTRKELWNEL 125

Query: 872  NRIKQ---IVGRAWLIMGDFNSILNSNERRNGVPIQPRDIKDFVNCSSVLGLMDLPSTGH 1042
             ++     +VGR+W+++GDFN ILN     N      R I+ F +C     L DL   G 
Sbjct: 126  VQLALSPVVVGRSWIVLGDFNQILNPESAINANI--GRKIRAFRSCLLDSDLYDLVYKGS 183

Query: 1043 FFTWTNNT----VWSKLDRAMVDNDWIMENPHAAAHFLPSGLSDHSPCVVNITNASAAGK 1210
             +TW N      +  K+DR +V++ W    P A A+F     SDHS C V +  A    K
Sbjct: 184  SYTWWNKCSSRPLAKKIDRILVNDHWNTLFPSAYANFGEPDFSDHSSCEVVLDPAVLKAK 243

Query: 1211 TPWRFFNMWTEHDEFMATVRDKW-DITIWGTAQFRLRTKLRELKSCLKTLNDKHFXXXXX 1387
             P+RFFN +  + +F+  +R+ W    + G+A +R+  KL+ LK  +   + +++     
Sbjct: 244  RPFRFFNYFLHNPDFLQLIRENWYSCNVSGSAMYRVSKKLKHLKLPICCFSRENYSDIEK 303

Query: 1388 XXXXXXXXXXXXXXGLHDDPNNQEIANILPALRERSSFLSNAEKQFFRQKAKSKFIIHSD 1567
                              +P+       L A R +   L+ AE+ FF QK+   ++   D
Sbjct: 304  RVSEAHAIVLHRQRITLTNPSVVHATLELEATR-KWQILAKAEESFFCQKSSISWLYEGD 362

Query: 1568 KCSKFFHAIVKRNAKRNFISSLTRDDG----TLTNSTEQVVGEFLGFYKGLLGTAQHTQH 1735
              + +FH +       N I+ L  D G    T     E +      F++ LL   +    
Sbjct: 363  NNTAYFHKMADMRKSINTINFLIDDFGERIETQQGIKEGIKEHSCNFFESLLCGVEGENS 422

Query: 1736 IDEDVINNGPLL-----AAENWDSLLRAVSKEEISYALNDVEYDKSPGPDGFSSKFFKKA 1900
            + +  +N   LL     + +  + L R+ S  +I  A   +  +K+ GPDG+SS+FFK  
Sbjct: 423  LAQSDMN---LLLSFRCSVDQINDLERSFSDLDIQEAFFSLPRNKASGPDGYSSEFFKGV 479

Query: 1901 WNIVGVDFTEAINEFFVSGRLLKEWNHVTVALIPKTAHSPKVGDFRPISCCNVFYKVLSK 2080
            W +VG + TEA+ EFF SG+LLK+WN  T+ LIPK  +S K+ DFRPISC N  YKV++K
Sbjct: 480  WFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAK 539

Query: 2081 ILATRLSSVLDGIIDGAQAAFVKGRSMVDNIHLMQELLRSYNRKRTTPRCTLKIDLRKAF 2260
            +L +RL  +L+ +I  +Q+AF+ GR + +N+ L  E++  YN K  + R  LK+DLRKAF
Sbjct: 540  LLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAF 599

Query: 2261 DSVSWTFLREVLDGLGFPPRFVRWVMECVTTASYSLSINXXXXXXXXXXXXXRQGDPLSP 2440
            DSV W F+      L  P +FV W+ +C++T  +S+ +N             RQGDPLSP
Sbjct: 600  DSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSP 659

Query: 2441 YLFVICLEYLSRLIRKKTTNTHFNFHPKCGPLNITHLAFADDLMMLSRGDPISVKILLDC 2620
            YLFV+ +E  S L++ +    + ++HPK   L+I+HL FADD+M+   G   S+  + + 
Sbjct: 660  YLFVLAMEVFSSLLKARFDAGYIHYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEA 719

Query: 2621 LDDFGSKSGLKMNILKSNIFMAGIKERDSLNILSFSQLTQGSMPFRYLGIPLAAERLKVA 2800
            LDDF S SGL +N  K+N+++AG  E ++L I  +      ++P RYLG+PL + +LK++
Sbjct: 720  LDDFASWSGLHVNKDKTNLYLAGTDEVEALAISHYG-FPISTLPIRYLGLPLMSRKLKIS 778

Query: 2801 HYEELIAKIREYISGWSASTLSYAGRTELIRSVVQGVECFWLSIFPIPNSVRDKIIQICR 2980
             Y EL+ + R     W+  +LS+AGR +LI SV+ G+  FW+S F +      KI  +C 
Sbjct: 779  EY-ELVKRFR----SWAVKSLSFAGRVQLITSVITGLVNFWMSTFVLLLGCVKKIESLCS 833

Query: 2981 NFLWG----TGGKAHIAWTTICLPKDEGGLGIRDLQAWNHSLLAKTLWNIHARKDSLW 3142
             FLW         A IAW+ +CLPK+EGG+G+R    WN +   + +W + A  D LW
Sbjct: 834  RFLWSGSIDASKGAKIAWSGVCLPKNEGGVGLRRFTPWNKTFYLRFIWPLFADNDVLW 891


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
            [Arabidopsis thaliana]
          Length = 893

 Score =  514 bits (1324), Expect = e-142
 Identities = 312/898 (34%), Positives = 473/898 (52%), Gaps = 22/898 (2%)
 Frame = +2

Query: 515  WNIRGFNSPLKQDEVFNLIREKNIDVFG-LLETKASQQTINKFVDNRLNGWSSCNNFDLV 691
            WN+RGFN    +   F      N  +FG L+ET   Q    KF+ N L GWS   N++  
Sbjct: 8    WNVRGFNISSHR-RGFKKWFLLNKPLFGGLIETHVKQPKEKKFISNLLPGWSFVENYEFS 66

Query: 692  KGGRIAIFWNMAKVNIEVIGFHPQVIHTLATCKITQRIFFVSFVYGLHSVGDRKPLWEEL 871
              G+I + W+ + V + VIG   Q+I        +   F VS VY  +  G RK LW EL
Sbjct: 67   VLGKIWVLWDPS-VKVVVIGRSLQMITCELLLPDSPSWFVVSIVYASNEEGTRKELWNEL 125

Query: 872  NRIKQ---IVGRAWLIMGDFNSILNSNERRNGVPIQPRDIKDFVNCSSVLGLMDLPSTGH 1042
             ++     +VGR+W+++GDFN ILN     N      R I+ F +C     L DL   G 
Sbjct: 126  VQLALSPVVVGRSWIVLGDFNQILNPESAINANI--GRKIRAFRSCLLDSDLYDLVYKGS 183

Query: 1043 FFTWTNNT----VWSKLDRAMVDNDWIMENPHAAAHFLPSGLSDHSPCVVNITNASAAGK 1210
             +TW N      +  K+DR +V++ W    P A A+F     SDHS C V +  A    K
Sbjct: 184  SYTWWNKCSSRPLAKKIDRILVNDHWNTLFPSAYANFGEPDFSDHSSCEVVLDPAVLKAK 243

Query: 1211 TPWRFFNMWTEHDEFMATVRDKW-DITIWGTAQFRLRTKLRELKSCLKTLNDKHFXXXXX 1387
             P+RFFN +  + +F+  +R+ W    + G+A +R+  KL+ LK  +   + +++     
Sbjct: 244  RPFRFFNYFLHNPDFLQLIRENWYSCNVSGSAMYRVSKKLKHLKLPICCFSRENYSDIEK 303

Query: 1388 XXXXXXXXXXXXXXGLHDDPNNQEIANILPALRERSSFLSNAEKQFFRQKAKSKFIIHSD 1567
                              +P+       L A R +   L+ AE+ FF QK+   ++   D
Sbjct: 304  RVSEAHAIVLHRQRITLTNPSVVHATLELEATR-KWQILAKAEESFFCQKSSISWLYEGD 362

Query: 1568 KCSKFFHAIVKRNAKRNFISSLTRDDG----TLTNSTEQVVGEFLGFYKGLLGTAQHTQH 1735
              + +FH +       N I+ L  D G    T     E +      F++ LL   +    
Sbjct: 363  NNTAYFHKMADMRKSINTINFLIDDFGERIETQQGIKEGIKEHSCNFFESLLCGVEGENS 422

Query: 1736 IDEDVINNGPLL-----AAENWDSLLRAVSKEEISYALNDVEYDKSPGPDGFSSKFFKKA 1900
            + +  +N   LL     + +  + L R+ S  +I  A   +  +K+ GPDG+SS+FFK  
Sbjct: 423  LAQSDMN---LLLSFRCSVDQINDLERSFSDLDIQEAFFSLPRNKASGPDGYSSEFFKGV 479

Query: 1901 WNIVGVDFTEAINEFFVSGRLLKEWNHVTVALIPKTAHSPKVGDFRPISCCNVFYKVLSK 2080
            W +VG + TEA+ EFF SG+LLK+WN  T+ LIPK  +S K+ DFRPISC N  YKV++K
Sbjct: 480  WFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAK 539

Query: 2081 ILATRLSSVLDGIIDGAQAAFVKGRSMVDNIHLMQELLRSYNRKRTTPRCTLKIDLRKAF 2260
            +L +RL  +L+ +I  +Q+AF+ GR + +N+ L  E++  YN K  + R  LK+DLRKAF
Sbjct: 540  LLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAF 599

Query: 2261 DSVSWTFLREVLDGLGFPPRFVRWVMECVTTASYSLSINXXXXXXXXXXXXXRQGDPLSP 2440
            DSV W F+      L  P +FV W+ +C++T  +S+ +N             RQGDPLSP
Sbjct: 600  DSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSP 659

Query: 2441 YLFVICLEYLSRLIRKKTTNTHFNFHPKCGPLNITHLAFADDLMMLSRGDPISVKILLDC 2620
            YLFV+ +E  S L++ +    +  +HPK   L+I+HL FADD+M+   G   S+  + + 
Sbjct: 660  YLFVLAMEVFSSLLKARFDAGYIQYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEA 719

Query: 2621 LDDFGSKSGLKMNILKSNIFMAGIKERDSLNILSFSQLTQGSMPFRYLGIPLAAERLKVA 2800
            LDDF S SGL +N  K+N+++AG  E ++L I  +      ++P RYLG+PL + +LK++
Sbjct: 720  LDDFASWSGLHVNKDKTNLYLAGTDEVEALAISHYG-FPISTLPIRYLGLPLMSRKLKIS 778

Query: 2801 HYEELIAKIREYISGWSASTLSYAGRTELIRSVVQGVECFWLSIFPIPNSVRDKIIQICR 2980
             Y EL+ + R     W+  +LS+AGR +LI SV+ G+  FW+S F +      KI  +C 
Sbjct: 779  EY-ELVKRFR----SWAVKSLSFAGRVQLITSVITGLVNFWMSTFVLLLGCVKKIESLCS 833

Query: 2981 NFLWG----TGGKAHIAWTTICLPKDEGGLGIRDLQAWNHSLLAKTLWNIHARKDSLW 3142
             FLW         A IAW+ +CLPK+EGG+ +R    WN +   + +W + A  D LW
Sbjct: 834  RFLWSGSIDASKGAKIAWSGVCLPKNEGGVALRRFTPWNKTFYLRFIWPLFADNDVLW 891


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  503 bits (1295), Expect = e-139
 Identities = 274/794 (34%), Positives = 440/794 (55%), Gaps = 15/794 (1%)
 Frame = +2

Query: 908  IMGDFNSILNSNERRNGVPIQ-PRDIKDFVNCSSVLGLMDLPSTGHFFTWTNNT----VW 1072
            ++GDFN +L   E  N   +   R ++DF +C S + L DL   G+ FTW N +    + 
Sbjct: 1    MLGDFNQVLLPQEHSNPPSLNIDRRMRDFGSCLSEMELSDLVFKGNSFTWWNKSSIRPIA 60

Query: 1073 SKLDRAMVDNDWIMENPHAAAHFLPSGLSDHSPCVVNITNASAAGKTPWRFFNMWTEHDE 1252
             KLDR + ++ W    P +   F     SDH  C V +     + K P++FFN   ++++
Sbjct: 61   KKLDRILANDSWCNLYPSSHGLFGNLDFSDHVSCGVVLEANGISAKRPFKFFNFLLKNED 120

Query: 1253 FMATVRDKWDIT-IWGTAQFRLRTKLRELKSCLKTLNDKHFXXXXXXXXXXXXXXXXXXX 1429
            F+  V D W  T + G++ +R+  KL+ +K  +K  +  ++                   
Sbjct: 121  FLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLITCQN 180

Query: 1430 GLHDDPNNQEIANILPALRERSSFLSNAEKQFFRQKAKSKFIIHSDKCSKFFHAIVKRNA 1609
                +P+    A  L A R +   LS AE+ FF Q+++  +    D  + +FH +V    
Sbjct: 181  LTLANPSVSNAALELEAQR-KWVLLSCAEESFFHQRSRVSWFAEGDSNTHYFHRMVDSRK 239

Query: 1610 KRNFISSLTRDDGTLTNSTEQVVGEFLGFYKGLLGTAQHTQHIDEDVINNGPLL-----A 1774
              N I+SL   +G L +S + ++   + +Y+ LLG+ +    ++++ +N   LL     +
Sbjct: 240  SFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQEDMN---LLLTYRCS 296

Query: 1775 AENWDSLLRAVSKEEISYALNDVEYDKSPGPDGFSSKFFKKAWNIVGVDFTEAINEFFVS 1954
             +    L ++ + +EI  A   +  +K+ GPDG+S +FF+  W+I+G +   AI+EFF S
Sbjct: 297  QDQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDS 356

Query: 1955 GRLLKEWNHVTVALIPKTAHSPKVGDFRPISCCNVFYKVLSKILATRLSSVLDGIIDGAQ 2134
            G+LLK+WN  T+ LIPKT+++  + +FRPISC N  YKV+SK+L +RL  +L  +I  +Q
Sbjct: 357  GQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQ 416

Query: 2135 AAFVKGRSMVDNIHLMQELLRSYNRKRTTPRCTLKIDLRKAFDSVSWTFLREVLDGLGFP 2314
            +AF+ GRS+ +N+ L  E++  YNR   +PR  LK+DL+KAFDSV W F+   L  L  P
Sbjct: 417  SAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIP 476

Query: 2315 PRFVRWVMECVTTASYSLSINXXXXXXXXXXXXXRQGDPLSPYLFVICLEYLSRLIRKKT 2494
             R++ W+ +C+TT S+++S+N             RQGDPLSPYLFV+ +E  S+L+  + 
Sbjct: 477  ERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRY 536

Query: 2495 TNTHFNFHPKCGPLNITHLAFADDLMMLSRGDPISVKILLDCLDDFGSKSGLKMNILKSN 2674
             + + ++HPK G L+I+HL FADD+M+   G   S+  + + LDDF   SGLK+N  KS 
Sbjct: 537  DSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQ 596

Query: 2675 IFMAGIKERDSLNILSFSQLTQGSMPFRYLGIPLAAERLKVAHYEELIAKIREYISGWSA 2854
            +F AG+   + +   ++     G+ P RYLG+PL   +L++A Y  L+ K+   +  W +
Sbjct: 597  LFQAGLDLSERITSAAYG-FPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVS 655

Query: 2855 STLSYAGRTELIRSVVQGVECFWLSIFPIPNSVRDKIIQICRNFLWG---TGGK-AHIAW 3022
              LS+AGRT+LI SV+ G+  FW+S F +P     KI  +C  FLW     G K + ++W
Sbjct: 656  KALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSW 715

Query: 3023 TTICLPKDEGGLGIRDLQAWNHSLLAKTLWNIHARKDSLWYRWIHHYYLHNRPFRDWTVA 3202
               CLPK EGGLG R    WN +LL + +W +  R  SLW +W  H+ L +  F      
Sbjct: 716  VDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQVNAL 775

Query: 3203 RSDSNLIKNIYSIR 3244
            ++D    K + ++R
Sbjct: 776  QTDPWTWKMLLNLR 789



 Score = 65.1 bits (157), Expect = 2e-07
 Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 2/151 (1%)
 Frame = +2

Query: 3374 KPWAGIVWASGITPKHSFTLWLAAHKRIQTKDRLGHLEL-EDGTCNFCAAQPETAAHLFF 3550
            K WA  VW  G  PKH+F  W A   R+ T+ RL    L     C  C+   ET  HL  
Sbjct: 908  KRWAKSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLL 967

Query: 3551 NCPFSAAIWDGI-KEWTGISRQMTTLSSAFKWLKKEARGTSKKSKGQKIAMATTVYQIWN 3727
             C FS+ +W  +        R + T +    W ++     +  S  +K+     VY +W 
Sbjct: 968  LCDFSSQVWRMVFLRLCPRQRLLCTWAELLSWTRQST--AAAPSLLRKVVAQLVVYNLWR 1025

Query: 3728 ARNRLIFEGEVLHIDFVIHKIKTHIYKIMYS 3820
             RN ++     +    V   +   +  ++ S
Sbjct: 1026 QRNLVLHSSLRVSCSVVFRLVDRELRNVILS 1056


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  503 bits (1295), Expect = e-139
 Identities = 274/794 (34%), Positives = 440/794 (55%), Gaps = 15/794 (1%)
 Frame = +2

Query: 908  IMGDFNSILNSNERRNGVPIQ-PRDIKDFVNCSSVLGLMDLPSTGHFFTWTNNT----VW 1072
            ++GDFN +L   E  N   +   R ++DF +C S + L DL   G+ FTW N +    + 
Sbjct: 1    MLGDFNQVLLPQEHSNPPSLNIDRRMRDFGSCLSEMELSDLVFKGNSFTWWNKSSIRPIA 60

Query: 1073 SKLDRAMVDNDWIMENPHAAAHFLPSGLSDHSPCVVNITNASAAGKTPWRFFNMWTEHDE 1252
             KLDR + ++ W    P +   F     SDH  C V +     + K P++FFN   ++++
Sbjct: 61   KKLDRILANDSWCNLYPSSHGLFGNLDFSDHVSCGVVLEANGISAKRPFKFFNFLLKNED 120

Query: 1253 FMATVRDKWDIT-IWGTAQFRLRTKLRELKSCLKTLNDKHFXXXXXXXXXXXXXXXXXXX 1429
            F+  V D W  T + G++ +R+  KL+ +K  +K  +  ++                   
Sbjct: 121  FLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLITCQN 180

Query: 1430 GLHDDPNNQEIANILPALRERSSFLSNAEKQFFRQKAKSKFIIHSDKCSKFFHAIVKRNA 1609
                +P+    A  L A R +   LS AE+ FF Q+++  +    D  + +FH +V    
Sbjct: 181  LTLANPSVSNAALELEAQR-KWVLLSCAEESFFHQRSRVSWFAEGDSNTHYFHRMVDSRK 239

Query: 1610 KRNFISSLTRDDGTLTNSTEQVVGEFLGFYKGLLGTAQHTQHIDEDVINNGPLL-----A 1774
              N I+SL   +G L +S + ++   + +Y+ LLG+ +    ++++ +N   LL     +
Sbjct: 240  SFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQEDMN---LLLTYRCS 296

Query: 1775 AENWDSLLRAVSKEEISYALNDVEYDKSPGPDGFSSKFFKKAWNIVGVDFTEAINEFFVS 1954
             +    L ++ + +EI  A   +  +K+ GPDG+S +FF+  W+I+G +   AI+EFF S
Sbjct: 297  QDQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDS 356

Query: 1955 GRLLKEWNHVTVALIPKTAHSPKVGDFRPISCCNVFYKVLSKILATRLSSVLDGIIDGAQ 2134
            G+LLK+WN  T+ LIPKT+++  + +FRPISC N  YKV+SK+L +RL  +L  +I  +Q
Sbjct: 357  GQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQ 416

Query: 2135 AAFVKGRSMVDNIHLMQELLRSYNRKRTTPRCTLKIDLRKAFDSVSWTFLREVLDGLGFP 2314
            +AF+ GRS+ +N+ L  E++  YNR   +PR  LK+DL+KAFDSV W F+   L  L  P
Sbjct: 417  SAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIP 476

Query: 2315 PRFVRWVMECVTTASYSLSINXXXXXXXXXXXXXRQGDPLSPYLFVICLEYLSRLIRKKT 2494
             R++ W+ +C+TT S+++S+N             RQGDPLSPYLFV+ +E  S+L+  + 
Sbjct: 477  ERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRY 536

Query: 2495 TNTHFNFHPKCGPLNITHLAFADDLMMLSRGDPISVKILLDCLDDFGSKSGLKMNILKSN 2674
             + + ++HPK G L+I+HL FADD+M+   G   S+  + + LDDF   SGLK+N  KS 
Sbjct: 537  DSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQ 596

Query: 2675 IFMAGIKERDSLNILSFSQLTQGSMPFRYLGIPLAAERLKVAHYEELIAKIREYISGWSA 2854
            +F AG+   + +   ++     G+ P RYLG+PL   +L++A Y  L+ K+   +  W +
Sbjct: 597  LFQAGLDLSERITSAAYG-FPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVS 655

Query: 2855 STLSYAGRTELIRSVVQGVECFWLSIFPIPNSVRDKIIQICRNFLWG---TGGK-AHIAW 3022
              LS+AGRT+LI SV+ G+  FW+S F +P     KI  +C  FLW     G K + ++W
Sbjct: 656  KALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSW 715

Query: 3023 TTICLPKDEGGLGIRDLQAWNHSLLAKTLWNIHARKDSLWYRWIHHYYLHNRPFRDWTVA 3202
               CLPK EGGLG R    WN +LL + +W +  R  SLW +W  H+ L +  F      
Sbjct: 716  VDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQVNAL 775

Query: 3203 RSDSNLIKNIYSIR 3244
            ++D    K + ++R
Sbjct: 776  QTDPWTWKMLLNLR 789



 Score = 65.1 bits (157), Expect = 2e-07
 Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 2/151 (1%)
 Frame = +2

Query: 3374 KPWAGIVWASGITPKHSFTLWLAAHKRIQTKDRLGHLEL-EDGTCNFCAAQPETAAHLFF 3550
            K WA  VW  G  PKH+F  W A   R+ T+ RL    L     C  C+   ET  HL  
Sbjct: 908  KRWARSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLL 967

Query: 3551 NCPFSAAIWDGI-KEWTGISRQMTTLSSAFKWLKKEARGTSKKSKGQKIAMATTVYQIWN 3727
             C FS+ +W  +        R + T +    W ++     +  S  +K+     VY +W 
Sbjct: 968  LCDFSSQVWRMVFLRLCPRQRLLCTWAELLSWTRQST--AAAPSLLRKVVAQLVVYNLWR 1025

Query: 3728 ARNRLIFEGEVLHIDFVIHKIKTHIYKIMYS 3820
             RN ++     +    V   +   +  ++ S
Sbjct: 1026 QRNLVLHSSLRVSCSVVFRLVDRELRNVILS 1056


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score =  486 bits (1250), Expect = e-134
 Identities = 334/1107 (30%), Positives = 519/1107 (46%), Gaps = 18/1107 (1%)
 Frame = +2

Query: 527  GFNSPLKQDEVFNLIREKNIDVFGLLETKASQQTINKFVDNRLNGWSSCNNFDLVKGGRI 706
            G NS  +Q  V + I   N+ V   LET  +Q+  N  + + L GW   +N+   + GRI
Sbjct: 53   GLNSRNRQRVVRSWIASNNLLVGCFLETHVAQENANSVLASTLPGWRMDSNYCCSELGRI 112

Query: 707  AIFWNMAKVNIEVIGFHPQVIHTLATCKITQRIFFVSFVYGLHSVGDRKPLWEE---LNR 877
             I W+ + +++ V     Q++          + F V+FVYG +S  DR+ LWE+   L+R
Sbjct: 113  WIVWDPS-ISVLVFKRTDQIMFCSIKIPSLLQSFAVAFVYGRNSELDRRSLWEDILVLSR 171

Query: 878  IKQIVGRAWLIMGDFNSILNSNERR--NGVPIQPRDIKDFVNCSSVLGLMDLPSTGHFFT 1051
               +    WL++GDFN I  ++E    N   +  R ++D   C     L DLPS G FFT
Sbjct: 172  TSPLSVTPWLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPSRGVFFT 231

Query: 1052 WTN----NTVWSKLDRAMVDNDWIMENPHAAAHFLPSGLSDHSPCVVNITNASAAGKTPW 1219
            W+N    N +  KLDRA+ + +W    P A A F P G SDH+PC++ I N     K  +
Sbjct: 232  WSNHQQDNPILRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPPPSKKSF 291

Query: 1220 RFFNMWTEHDEFMATVRDKWDI-TIWGTAQFRLRTKLRELKSCLKTLNDKHFXXXXXXXX 1396
            ++F+  + H  ++A +   W+  T+ G+  F LR  L+  K C +TLN   F        
Sbjct: 292  KYFSFLSSHPSYLAALSTAWEENTLVGSHMFSLRQHLKVAKLCCRTLNRLRFSNIQQRTA 351

Query: 1397 XXXXXXXXXXXGLHDDPNNQEIANILPALRERSSFLSNAEKQFFRQKAKSKFIIHSDKCS 1576
                        L   P++        A R++  F + A + FFRQK++ +++   D  +
Sbjct: 352  QSLTRLEDIQVELLTSPSDTLFRREHVA-RKQWIFFAAALESFFRQKSRIRWLHEGDANT 410

Query: 1577 KFFHAIVKRNAKRNFISSLTRDDGTLTNSTEQVVGEFLGFYKGLLGTAQH--TQHIDEDV 1750
            +FFH  V  +   N I  L  DDG    + +Q+ G  + +Y  LLG      T    E +
Sbjct: 411  RFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAYYSHLLGIPSENVTPFSVEKI 470

Query: 1751 INNGPLLAAENWDSLLRAV-SKEEISYALNDVEYDKSPGPDGFSSKFFKKAWNIVGVDFT 1927
                P        S L  + S+EEI+  L  +  +K+PGPDGF  +FF +AW IV     
Sbjct: 471  KGLLPFRCDSFLASQLTTIPSEEEITQVLFSMPRNKAPGPDGFPVEFFIEAWAIVKSSVV 530

Query: 1928 EAINEFFVSGRLLKEWNHVTVALIPKTAHSPKVGDFRPISCCNVFYKVLSKILATRLSSV 2107
             AI EFF+SG L + +N   + LIPK   + ++  FRP++CC   YKV+++I++ RL   
Sbjct: 531  AAIREFFISGNLPRGFNATAITLIPKVTGADRLTQFRPVACCTTIYKVITRIISRRLKLF 590

Query: 2108 LDGIIDGAQAAFVKGRSMVDNIHLMQELLRSYNRKRTTPRCTLKIDLRKAFDSVSWTFLR 2287
            +D  +   Q  F+KGR + +N+ L  EL+ ++     T R  L++D+ KA+D+V+W FL 
Sbjct: 591  IDQAVQANQVGFIKGRLLCENVLLASELVDNFEADGETTRGCLQVDISKAYDNVNWEFLI 650

Query: 2288 EVLDGLGFPPRFVRWVMECVTTASYSLSINXXXXXXXXXXXXXRQGDPLSPYLFVICLEY 2467
             +L  L  P  F+ W+  C+++ASYS++ N             RQGDP+S +LFV+ ++ 
Sbjct: 651  NILKALDLPLVFIHWIWVCISSASYSIAFNGELIGFFQGKKGIRQGDPMSSHLFVLVMDV 710

Query: 2468 LSRLIRKKTTNTHFNFHPKCGPLNITHLAFADDLMMLSRGDPISVKILLDCLDDFGSKSG 2647
            LS+ +     N  FN HP C    ITHL+FADD+++ S G   S+  +L  LDDF   SG
Sbjct: 711  LSKSLDLGALNGLFNLHPNCLAPIITHLSFADDVLVFSDGAASSIAGILTILDDFRQGSG 770

Query: 2648 LKMNILKSNIFMAGIKERDSLNILSFSQLTQGSMPFRYLGIPLAAERLKVAHYEELIAKI 2827
            L +N  K+ + + G     + ++     +T GS+P RYLG+PL +++++   Y+ L+ +I
Sbjct: 771  LGINREKTELLLDGGNFARNRSLADNLGITHGSLPVRYLGVPLMSQKMRRQDYQPLVDRI 830

Query: 2828 REYISGWSASTLSYAGRTELIRSVVQGVECFWLSIFPIPNSVRDKIIQICRNFLWGTGGK 3007
                + W+A  LS+AGR +L+  +       W  +  +    R  I  IC      T   
Sbjct: 831  NSRFTSWTARHLSFAGRLQLLNWI-------WRKLCKLRPFARPFI--ICEVGSGVTASF 881

Query: 3008 AHIAWTTICLPKDEGGLGIRDLQAWNHSLLAKTLWNIHARKDSLWYRWIHHYYLHNRPFR 3187
             H  WT      D G L    L      LLA    N   R D+L               R
Sbjct: 882  WHDNWT------DHGPL--LHLTGPAGPLLAGLPLNSVVR-DAL---------------R 917

Query: 3188 DWTVARSDSNLIKNIYSIRTQILHKYGGNWQKTEQQLVNWHSNHQVKGPK----NVYNFF 3355
            D T   S S     + ++  ++L                W   H     +    + +++ 
Sbjct: 918  DDTWRISSSRSRNPVITLLQRVLPSAASLIDCPHDDTYLWKIGHHAPSNRFSTADTWSYL 977

Query: 3356 RDAGTKKPWAGIVWASGITPKHSFTLWLAAHKRIQTKDRLGHLELE-DGTCNFCAAQPET 3532
            + + T   W   VW     PK +F  W+ AH R+ T+DRL         TC  C    E+
Sbjct: 978  QPSSTSVLWHKAVWFKDHVPKQAFICWVVAHNRLHTRDRLRRWGFSIPPTCVLCNDLDES 1037

Query: 3533 AAHLFFNCPFSAAIWDGIKEWTGISRQMTTLSSAFKWLKKEARGTSKKSKGQKIAMATTV 3712
              HLFF C FS+ IW        ++           W    +R  +  +   K+    +V
Sbjct: 1038 REHLFFRCQFSSEIWSFFMRALNLN-PPPQFMHCLLWTLTASRDRN-ITLITKLLFHASV 1095

Query: 3713 YQIWNARNRLIFEGEVLHIDFVIHKIK 3793
            Y IW  RN  I    V     +I +I+
Sbjct: 1096 YFIWRERNLRIHSNSVRPAHLIIKEIQ 1122


>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
            thaliana]
          Length = 1253

 Score =  482 bits (1241), Expect = e-133
 Identities = 314/1049 (29%), Positives = 506/1049 (48%), Gaps = 56/1049 (5%)
 Frame = +2

Query: 812  VSFVYGLHSVGDRKPLWEELNRIKQIV---GRAWLIMGDFNSILNSNERRNGVPIQP-RD 979
            VS VY  +    RK LWEEL  +   +   G+ W+++GDFN +L   E      +   R 
Sbjct: 55   VSIVYAANEAITRKELWEELLLLSVSLSGNGKPWIMLGDFNQVLCPAEHSQATSLNVNRR 114

Query: 980  IKDFVNCSSVLGLMDLPSTGHFFTWTNNT----VWSKLDRAMVDNDWIMENPHAAAHFLP 1147
            +K F +C     L DL   G+ FTW N +    V  KLDR +V+  W    P A A F  
Sbjct: 115  MKVFRDCLFEAELCDLVFKGNTFTWWNKSATRPVAKKLDRILVNESWCSRFPSAYAVFGE 174

Query: 1148 SGLSDHSPCVVNITNASAAGKTPWRFFNMWTEHDEFMATVRDKW-DITIWGTAQFRLRTK 1324
               SDH+ C V I       K P+RF+N   ++ +F++ V + W  I + G++ F++  K
Sbjct: 175  PDFSDHASCGVIINPLMHREKRPFRFYNFLLQNPDFISLVGELWYSINVVGSSMFKMSKK 234

Query: 1325 LRELKSCLKTLNDKHFXXXXXXXXXXXXXXXXXXXGLHDDPNNQEIANILPALRERSSFL 1504
            L+ LK+ ++T + ++F                       DP     A  + A R +   L
Sbjct: 235  LKALKNPIRTFSMENFSNLEKRVKEAHNLVLYRQNKTLSDPTIPNAALEMEAQR-KWLIL 293

Query: 1505 SNAEKQFFRQKAKSKFIIHSDKCSKFFHAIVKRNAKRNFISSLTRDDGTLTNSTEQVVGE 1684
              AE+ FF Q+++  ++   D  + +FH +       N I  +  D+G   ++   +   
Sbjct: 294  VKAEESFFCQRSRVTWMGEGDSNTSYFHRMADSRKAVNTIHIIIDDNGVKIDTQLGIKEH 353

Query: 1685 FLGFYKGLLGTAQHTQHIDEDVINNGPLLAAENWDSLL-------------RAVSKEEIS 1825
             + ++  LLG                P+L  E++D LL              + S+++I 
Sbjct: 354  CIEYFSNLLGGEV-----------GPPMLIQEDFDLLLPFRCSHDQKKELAMSFSRQDIK 402

Query: 1826 YALNDVEYDKSPGPDGFSSKFFKKAWNIVGVDFTEAINEFFVSGRLLKEWNHVTVALIPK 2005
             A      +K+ GPDGF  +FFK+ W+++G + T+A++EFF S  LLK+WN  T+ LIPK
Sbjct: 403  SAFFSFPSNKTSGPDGFPVEFFKETWSVIGTEVTDAVSEFFTSSVLLKQWNATTLVLIPK 462

Query: 2006 TAHSPKVGDFRPISCCN----VFYKVLSKILATRLSSVLDGIIDGAQAAFVKGRSMVDNI 2173
              ++ K+ DFRPISC +      YKV++++L  RL  +L  +I   Q+AF+ GR + +N+
Sbjct: 463  ITNASKMNDFRPISCNDFGPITLYKVIARLLTNRLQCLLSQVISPFQSAFLPGRFLAENV 522

Query: 2174 HLMQELLRSYNRKRTTPRCTLKIDLRKAFDSVSWTFLREVLDGLGFPPRFVRWVMECVTT 2353
             L  EL++ YNR+   PR  LK+DLRKAFDS+ W F+   L  +G P RFV W+ +C++T
Sbjct: 523  LLATELVQGYNRQNIDPRGMLKVDLRKAFDSIRWDFIISALKAIGIPDRFVYWITQCIST 582

Query: 2354 ASYSLSINXXXXXXXXXXXXXRQGDPLSPYLFVICLEYLSRLIRKKTTNTHFNFHPKCGP 2533
             ++S+ +N             RQG+PLSP+LFV+ +E  S L+  +    + ++HPK  P
Sbjct: 583  PTFSVCVNGNTGGFFKSTRGLRQGNPLSPFLFVLAMEVFSSLLNSRFQAGYIHYHPKTSP 642

Query: 2534 LNITHLAFADDLMMLSRGDPISVKILLDCLDDFGSKSGLKMNILKSNIFMAGIKERDSLN 2713
            L+I+HL FADD+M+   G   S+  + + L+DF   SGL +N  K+++++AG+   ++  
Sbjct: 643  LSISHLMFADDIMVFFDGGSSSLHGISEALEDFAFWSGLVLNREKTHLYLAGLDRIEAST 702

Query: 2714 ILSFSQLTQGSMPFRYLGIPLAAERLKVAHYEELIAKIREYISGWSASTLSYAGRTELIR 2893
            I                     A +L++A Y  L+ K+ +    WS   LS+AGR +LI 
Sbjct: 703  I---------------------ARKLRIAEYGPLLEKLAKRFRSWSVKCLSFAGRVQLIA 741

Query: 2894 SVVQGVECFWLSIFPIPNSVRDKIIQICRNFLWG----TGGKAHIAWTTICLPKDEGGLG 3061
            SV+ G+  FW+S F +P     +I  +C  FLW         A +AW+ +CLPK+EGG+G
Sbjct: 742  SVISGIINFWISTFILPKGCVKRIEALCARFLWSGNIDVKKGAKVAWSEVCLPKEEGGVG 801

Query: 3062 IRDLQAWNHSLLAKTLWNIHARKDSLWY-RW-----IHHYYLHNRPFR------------ 3187
            +R       ++L  TLW+   +K S W+  W     +   +  + P              
Sbjct: 802  LR-----RFTVLNTTLWD--GKKISFWFDNWSPLGPLFKLFGSSGPRALCIPIQAKVADA 854

Query: 3188 ----DWTVA--RSDSNLIKNIYSIRTQILHKYGGNWQKTEQQLVNWHSNHQVKGPKNVYN 3349
                 W ++  R+D  L   I+   T I      +   T   +V+  + H     +  + 
Sbjct: 855  CSDVGWLISPPRTDQALALLIH--LTTIALPCFDSSPDTFVWIVDDFTCHGFSAAR-TWE 911

Query: 3350 FFRDAGTKKPWAGIVWASGITPKHSFTLWLAAHKRIQTKDRLGHLELEDGT-CNFCAAQP 3526
              R     K W   VW  G  PKH+F +W++   R+ T+ RL    +   T C  C+++P
Sbjct: 912  AMRPKKPVKDWTKSVWFKGSVPKHAFNMWVSHLNRLPTRQRLAAWGVTTTTDCCLCSSRP 971

Query: 3527 ETAAHLFFNCPFSAAIWDGI-KEWTGISRQMTTLSSAFKWLKKEARGTSKKSKGQKIAMA 3703
            E+  HL   C FSA IW  +    T       + +    W +     +   S  +KIA  
Sbjct: 972  ESRDHLLLYCVFSAVIWKLVFFRLTPSQAIFNSWAELLSWTR--INSSKAPSLLRKIAAQ 1029

Query: 3704 TTVYQIWNARNRLIFEGEVLHIDFVIHKI 3790
             +V+ +W  RN ++     +    V H I
Sbjct: 1030 ASVFHLWKQRNNVLHNSIFISPATVFHFI 1058


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  481 bits (1237), Expect = e-132
 Identities = 272/795 (34%), Positives = 416/795 (52%), Gaps = 15/795 (1%)
 Frame = +2

Query: 812  VSFVYGLHSVGDRKPLWEELNRIKQ---IVGRAWLIMGDFNSILNSNERRNGVPIQ-PRD 979
            +SFVY       R+ LW E+        ++ + W ++GDFN IL+ +E          R 
Sbjct: 3    LSFVYASTDEVTRQILWNEIVDFSNDPCVIDKPWTVLGDFNQILHPSEHSTSDGFNVDRP 62

Query: 980  IKDFVNCSSVLGLMDLPSTGHFFTWTNNT----VWSKLDRAMVDNDWIMENPHAAAHFLP 1147
             + F     +  L DL   G+ FTW N      V  KLDR +V++ W    P +   F  
Sbjct: 63   TRIFRETILLASLTDLSFRGNTFTWWNKRSRAPVAKKLDRILVNDKWTTTFPSSLGLFGE 122

Query: 1148 SGLSDHSPCVVNITNASAAGKTPWRFFNMWTEHDEFMATVRDKWDIT-IWGTAQFRLRTK 1324
               SDHS C +++ +AS   K P+RF N   + + F++ +  KW  T + G+A +R+  K
Sbjct: 123  PDFSDHSSCELSLMSASPRSKKPFRFNNFLLKDENFLSLICLKWFSTSVTGSAMYRVSVK 182

Query: 1325 LRELKSCLKTLNDKHFXXXXXXXXXXXXXXXXXXXGLHDDPNNQEIANILPALRERSSFL 1504
            L+ LK  ++  +  ++                    L   P     A I    + +   L
Sbjct: 183  LKALKKVIRDFSRDNYSDIEKRTKEAHDALLLAQSVLLASPCPSNAA-IEAETQRKWRIL 241

Query: 1505 SNAEKQFFRQKAKSKFIIHSDKCSKFFHAIVKRNAKRNFISSLTRDDGTLTNSTEQVVGE 1684
            + AE  FF Q+++  ++   D  S +FH +       N I  L+   G      + +   
Sbjct: 242  AEAEASFFYQRSRVNWLREGDMNSSYFHKMASARQSLNHIHFLSDPVGDRIEGQQNLENH 301

Query: 1685 FLGFYKGLLGTAQHTQHIDEDVINN--GPLLAAENWDSLLRAVSKEEISYALNDVEYDKS 1858
             + +++  LG+ Q     ++  I+N      +     SL    S E+I  A   +  +K+
Sbjct: 302  CVEYFQSNLGSEQGLPLFEQADISNLLSYRCSPAQQVSLDTPFSSEQIKNAFFSLPRNKA 361

Query: 1859 PGPDGFSSKFFKKAWNIVGVDFTEAINEFFVSGRLLKEWNHVTVALIPKTAHSPKVGDFR 2038
             GPDGFS +FF   W I+G + TEAI+EFF SG+LLK+WN   + LIPK  ++  + DFR
Sbjct: 362  SGPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLVLIPKITNASSMSDFR 421

Query: 2039 PISCCNVFYKVLSKILATRLSSVLDGIIDGAQAAFVKGRSMVDNIHLMQELLRSYNRKRT 2218
            PISC N  YKV+SK+L  RL   L   I  +Q+AF+ GR  ++N+ L  EL+  YN+K  
Sbjct: 422  PISCLNTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNKKNI 481

Query: 2219 TPRCTLKIDLRKAFDSVSWTFLREVLDGLGFPPRFVRWVMECVTTASYSLSINXXXXXXX 2398
             P   LK+DLRKAFDSV W F+   L  L  P +F  W++EC++TAS+S+ +N       
Sbjct: 482  APSSMLKVDLRKAFDSVRWDFIVSALRALNVPEKFTCWILECLSTASFSVILNGHSAGHF 541

Query: 2399 XXXXXXRQGDPLSPYLFVICLEYLSRLIRKKTTNTHFNFHPKCGPLNITHLAFADDLMML 2578
                  RQGDP+SPYLFV+ +E  S L++ + T+ +  +HPK   L I+HL FADD+M+ 
Sbjct: 542  WSSKGLRQGDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPKTSQLEISHLMFADDVMIF 601

Query: 2579 SRGDPISVKILLDCLDDFGSKSGLKMNILKSNIFMAGIKERDSLNILSFSQLTQGSMPFR 2758
              G   S+  +++ L+DF   SGL MN  K+ ++ AG+ + +S ++ S+     GS+P R
Sbjct: 602  FDGKSSSLHGIVESLEDFAGWSGLLMNTNKTQLYHAGLSQSESDSMASYG-FKLGSLPVR 660

Query: 2759 YLGIPLAAERLKVAHYEELIAKIREYISGWSASTLSYAGRTELIRSVVQGVECFWLSIFP 2938
            YLG+PL + +L +A Y  LI KI    + W    LS+AGR +L+ SV+ G+  FW+S F 
Sbjct: 661  YLGLPLMSRKLTIAEYAPLIEKITARFNSWVVRLLSFAGRVQLLASVISGIVNFWISSFI 720

Query: 2939 IPNSVRDKIIQICRNFLWGT----GGKAHIAWTTICLPKDEGGLGIRDLQAWNHSLLAKT 3106
            +P     KI  +C  FLW +     G A +AW+ +CLPK EGG+G+R     N +L  + 
Sbjct: 721  LPLGCIKKIESLCSRFLWSSRIDKKGIAKVAWSQVCLPKAEGGIGLRRFAVSNRTLYLRM 780

Query: 3107 LWNIHARKDSLWYRW 3151
            +W + +   SLW  W
Sbjct: 781  IWLLFSNSGSLWVAW 795



 Score = 68.6 bits (166), Expect = 2e-08
 Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = +2

Query: 3344 YNFFRDAGTKKPWAGIVWASGITPKHSFTLWLAAHKRIQTKDRLGHLELE-DGTCNFCAA 3520
            ++  R +    PWA  VW  G TPKH+F LW A   R+ TK RL    ++ D TC  C+ 
Sbjct: 936  WSALRPSSAPVPWARAVWFKGATPKHAFHLWTAHLDRLPTKVRLASWGMQIDTTCGLCSL 995

Query: 3521 QPETAAHLFFNCPFS 3565
             PET  HLF +C F+
Sbjct: 996  HPETRDHLFLSCDFA 1010


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  448 bits (1153), Expect = e-123
 Identities = 268/803 (33%), Positives = 414/803 (51%), Gaps = 33/803 (4%)
 Frame = +2

Query: 845  DRKPLWEELNRIKQ---IVGRAWLIMGDFNSILNSNERRNGV--PIQPRDIKDFVNCSSV 1009
            +RK LW +L        I  + W+I GDFN IL+  E  N    P+    ++DF    + 
Sbjct: 3    ERKELWNDLRDHSDSPIIRSKPWIIFGDFNEILDMEEHSNSRENPVTTTGMRDFQMAVNH 62

Query: 1010 LGLMDLPSTGHFFTWTN----NTVWSKLDRAMVDNDWIMENPHAAAHFLPSGLSDHSPCV 1177
              + DL   G  FTW+N    + +  KLDR +V++ W+   P + + F   G SDH  C 
Sbjct: 63   CSITDLAYHGPLFTWSNKRENDLIAKKLDRVLVNDVWLQSFPRSYSVFEAGGCSDHLRCR 122

Query: 1178 VNITNASAA---GKTPWRFFNMWTEHDEFMATVRDKWD----ITIWGTAQFRLRTKLREL 1336
            +N+   + A   GK P++F N+ TE + F+ TV   W+    I +  ++ FR   KL+ L
Sbjct: 123  INLNVGAGAVVKGKRPFKFVNVITEMEHFIPTVESYWNETEAIFMSTSSLFRFSKKLKGL 182

Query: 1337 KSCLKTLNDKHFXXXXXXXXXXXXXXXXXXXGLHDDPNNQEIANILPALRERSSFLSNAE 1516
            K  L+ L  +                         +P+   +     A   +   ++  E
Sbjct: 183  KPLLRNLGKERLGNLVKQTKEAFETLCQKQAMKMANPSPSSMQEENEAY-AKWDHIAVLE 241

Query: 1517 KQFFRQKAKSKFIIHSDKCSKFFHAIVKRNAKRNFISSLTRDDGTLTNSTEQVVGEFLGF 1696
            ++F +Q++K  ++   D+ +K FH  V     +N I  +   DG++ +  E++  E    
Sbjct: 242  EKFLKQRSKLHWLDIGDRNNKAFHRAVVAREAQNSIREIICHDGSVASQEEKIKTE---- 297

Query: 1697 YKGLLGTAQHTQHIDEDVINNGPLLAAENWDSLL-------------RAVSKEEISYALN 1837
                     H +   + + N+   +A E    LL               VS EEI   + 
Sbjct: 298  ------AEHHFREFLQLIPNDFEGIAVEELQDLLPYRCSDSDKEMLTNHVSAEEIHKVVF 351

Query: 1838 DVEYDKSPGPDGFSSKFFKKAWNIVGVDFTEAINEFFVSGRLLKEWNHVTVALIPKTAHS 2017
             +  DKSPGPDG++++F+K AWNI+G +F  AI  FF  G L K  N   +ALIPK   +
Sbjct: 352  SMPNDKSPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEA 411

Query: 2018 PKVGDFRPISCCNVFYKVLSKILATRLSSVLDGIIDGAQAAFVKGRSMVDNIHLMQELLR 2197
             ++ D+RPISCCNV YKV+SKI+A RL  VL   I G Q+AFVK R +++N+ L  E+++
Sbjct: 412  KEMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVK 471

Query: 2198 SYNRKRTTPRCTLKIDLRKAFDSVSWTFLREVLDGLGFPPRFVRWVMECVTTASYSLSIN 2377
             Y++   + RC LKID+ KAFDSV W FL  VL+ + FPP F  W+  C+TTAS+S+ +N
Sbjct: 472  DYHKDSVSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVN 531

Query: 2378 XXXXXXXXXXXXXRQGDPLSPYLFVICLEYLSRLIRKKTTNTHFNFHPKCGPLNITHLAF 2557
                         RQG  LSPYLFVI ++ LS+++ K      F +HPKC  + +THL+F
Sbjct: 532  GELAGVFSSARELRQGCSLSPYLFVISMDVLSKMLDKAVGARQFGYHPKCRAIGLTHLSF 591

Query: 2558 ADDLMMLSRGDPISVKILLDCLDDFGSKSGLKMNILKSNIFMAGIKERDSLNILSFSQLT 2737
            ADDLM+LS G   S+  ++  L +F   SGLK+++ KS +++AG++      I+      
Sbjct: 592  ADDLMILSDGKVRSIDGIVKVLYEFAKWSGLKISMEKSTMYLAGVQASVYQEIVQKFSFD 651

Query: 2738 QGSMPFRYLGIPLAAERLKVAHYEELIAKIREYISGWSASTLSYAGRTELIRSVVQGVEC 2917
             G +P RYLG+PL ++RL  +    LI ++R+ I  W++  LS+AGR  LI S +  +  
Sbjct: 652  VGKLPVRYLGLPLVSKRLTASDCLPLIEQLRKKIEAWTSRFLSFAGRLNLISSTLWSICN 711

Query: 2918 FWLSIFPIPNSVRDKIIQICRNFLWG----TGGKAHIAWTTICLPKDEGGLGIRDLQAWN 3085
            FW++ F +P +   +I ++C  FLW     +  KA ++W  IC PK E         AW+
Sbjct: 712  FWMAAFRLPRACIREIDKLCSAFLWSGTELSSNKAKVSWEAICKPKKE---------AWH 762

Query: 3086 HSLLAKTLWNIHARKDSLWYRWI 3154
                 K +W  H      +  W+
Sbjct: 763  -----KGVWFAHETPKHSFCVWL 780



 Score = 66.6 bits (161), Expect = 9e-08
 Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
 Frame = +2

Query: 3371 KKPWAGIVWASGITPKHSFTLWLAAHKRIQTKDRLGHLELEDGT-CNFCAAQPETAAHLF 3547
            K+ W   VW +  TPKHSF +WLA   ++ T  R+ H  L+    C  C    ET  HLF
Sbjct: 758  KEAWHKGVWFAHETPKHSFCVWLAIWNKLSTGQRMQHWNLQSSVGCVLCNNNLETRDHLF 817

Query: 3548 FNCPFSAAIWDGIKEWTGISRQMTTLSSAFKWLKKEARGTSKKSKGQKIAMATTVYQIWN 3727
            F+C +++ IW+ + +        T   +   ++  +          + +  A +VY IW 
Sbjct: 818  FSCAYTSGIWEALAKNLLQRSYTTDWQTIISYVSGQCHDRVSCFLARSVLQA-SVYTIWR 876

Query: 3728 ARN 3736
             RN
Sbjct: 877  ERN 879


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  436 bits (1122), Expect = e-119
 Identities = 276/892 (30%), Positives = 419/892 (46%), Gaps = 12/892 (1%)
 Frame = +2

Query: 1124 HAAAHFLPSGLSDHSPCVVNITNASAAGKTPWRFFNMWTEHDEFMATVRDKWDITIWGTA 1303
            ++   FLP G+SDH+  VV +       K P++FFN   + ++F+  V   W   +WG+ 
Sbjct: 136  YSVLSFLPPGISDHAAMVVKVGLPFRIRKAPFKFFNFLADREDFIPIVSAVWATNVWGSK 195

Query: 1304 QFRLRTKLRELKSCLKTLNDKHFXXXXXXXXXXXXXXXXXXXGLHDDPNNQEIANILPAL 1483
            QF++  KL+ +K+  K LN                                         
Sbjct: 196  QFQVWRKLKLVKNQFKLLN----------------------------------------- 214

Query: 1484 RERSSFLSNAEKQFFRQKAKSKFIIHSDKCSKFFHAIVKRNAKRNFISSLTRDDGTLTNS 1663
                    N  ++  ++K++ +++   DK S FF   + ++  RN I+++ R DG     
Sbjct: 215  -------CNVVEKLLKKKSRVQWLKKGDKNSTFFFKTMTKHRNRNRIATINRSDG----- 262

Query: 1664 TEQVVGEFLGFYKGLLGTAQHTQHIDEDVINNGPLLAAENWDSLLRAVSKEEISYALNDV 1843
                                             P LA     SL    + ++I      +
Sbjct: 263  ---------------------------------PDLAK----SLCNEFTHDDIRAVFFSM 285

Query: 1844 EYDKSPGPDGFSSKFFKKAWNIVGVDFTEA-INEFFVSGRLLKEWNHVTVALIPKTAHSP 2020
              +KSPGPDGF+  FF+KAW ++G +   A + EFF  G LL E N   + L+PK A+  
Sbjct: 286  NPNKSPGPDGFNGCFFQKAWLVIGDNVVAAAVKEFFSYGSLLMELNSTIITLVPKVANPT 345

Query: 2021 KVGDFRPISCCNVFYKVLSKILATRLSSVLDGIIDGAQAAFVKGRSMVDNIHLMQELLRS 2200
             + DFRPISCCN FYK+++K+LA RL   L  I+  +Q+ F+ GR + DNI L QE++  
Sbjct: 346  TMSDFRPISCCNTFYKIIAKLLANRLKGTLHLIVGPSQSTFIPGRRIGDNILLAQEIICD 405

Query: 2201 YNRKRTTPRCTLKIDLRKAFDSVSWTFLREVLDGLGFPPRFVRWVMECVTTASYSLSINX 2380
            Y++    PRCT  +D+ KA D+V W F+   L     P   + W+  C+++A +S+ +N 
Sbjct: 406  YHKADGQPRCTFMVDMMKANDTVEWDFIIATLQAFNIPSTLIGWIKSCISSAKFSVCVNG 465

Query: 2381 XXXXXXXXXXXXRQGDPLSPYLFVICLEYLSRLIRKK-TTNTHFNFHPKCGPLNITHLAF 2557
                        RQGDPLSPYLFVI +E LS  I+++   +  F +H +C  LN++HL F
Sbjct: 466  ELAGFFARRRGLRQGDPLSPYLFVIAMEVLSLCIQRRINCSPCFRYHWRCDQLNLSHLCF 525

Query: 2558 ADDLMMLSRGDPISVKILLDCLDDFGSKSGLKMNILKSNIFMAGIKERDSLNILSFSQLT 2737
            ADDL+M   GD  SV+ L D   +F S S LK N+ +S IF+AG+    S ++L  +  +
Sbjct: 526  ADDLLMFCNGDENSVRTLHDAFSNFESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFS 585

Query: 2738 QGSMPFRYLGIPLAAERLKVAHYEELIAKIREYISGWSASTLSYAGRTELIRSVVQGVEC 2917
             G+ P RYLGIPL   +L++     L+ +I   I  W    LS+AGR +LI+SV+  ++ 
Sbjct: 586  LGTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQV 645

Query: 2918 FWLSIFPIPNSVRDKIIQICRNFLW--GTGGKA--HIAWTTICLPKDEGGLGIRDLQAWN 3085
            +W S   +P  V   I +  R FLW     G+A   +AW+ ICLPK EGGLGI+DL  WN
Sbjct: 646  YWASHLILPKKVLKDIEKRLRCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWN 705

Query: 3086 HSLLAKTLWNIHARKDSLWYRWIHHYYLHNRPFRDWTVARSDSNLIKNIYSIR---TQIL 3256
             +L+   +WN+ +   + W  W+  Y L    F +  +    S   + +  IR       
Sbjct: 706  KALMISHIWNLVSSSSNFWTDWVKVYLLKGNSFWNAPLPSICSWNWRKLLKIRELCCSFF 765

Query: 3257 HKYGGNWQKTEQQLVNWHSNHQVKGPKNV---YNFFRDAGTKKPWAGIVWASGITPKHSF 3427
                G+ + T     NWH      GP  +    N   ++G  K  + ++  +G     S 
Sbjct: 766  VNIIGDGRATSLWFDNWHP----LGPLTLRWSSNIIGESGLSK--SAMLTPNGFYSTSSA 819

Query: 3428 TLWLAAHKRIQTKDRLGHLELEDGTCNFCAAQPETAAHLFFNCPFSAAIWDGIKEWTGIS 3607
               L   + I    RL           F A   ET  HLFF+C +S  IW  +     +S
Sbjct: 820  WNTLRPSRFIVPWYRL---------VWFVA---ETHNHLFFDCAYSFGIWTHVLSKCDVS 867

Query: 3608 RQMTTLSSAFKWLKKEARGTSKKSKGQKIAMATTVYQIWNARNRLIFEGEVL 3763
            + +   S    W+    +G S      K+A+   VY IW  RN   F  E L
Sbjct: 868  KPLLPWSDFIFWVATNWKGNSLPVVILKLALQAVVYAIWRERNNRRFRNESL 919


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  432 bits (1111), Expect = e-118
 Identities = 243/694 (35%), Positives = 372/694 (53%), Gaps = 12/694 (1%)
 Frame = +2

Query: 1139 FLPSGLSDHSPCVVNITNASAAG-KTPWRFFNMWTEHDEFMATVRDKW----DITIWGTA 1303
            + P G+ D       +  A+A G + P++F N+ T+  +F+  V   W     + +  +A
Sbjct: 521  YTPPGMRDFQEIGRLMLEAAATGGRKPFKFVNVLTKLPQFLPVVESHWASSAPLYVSTSA 580

Query: 1304 QFRLRTKLRELKSCLKTLNDKHFXXXXXXXXXXXXXXXXXXXGLHDDPNNQEIANILPAL 1483
             +R   KL+ LK  L+ L  +                         +P+ + IA  L A 
Sbjct: 581  LYRFSKKLKTLKPHLRELGKEKLGDLPKRTREAHILLCEKQATTLANPSQETIAEELKAY 640

Query: 1484 RERSSFLSNAEKQFFRQKAKSKFIIHSDKCSKFFHAIVKRNAKRNFISSLTRDDGTLTNS 1663
             + +  LS  E+ F +QK+K  ++   D  + +FH   +    RN I  +   +     +
Sbjct: 641  TDWTH-LSELEEGFLKQKSKLHWMNVGDGNNSYFHKAAQVRKMRNSIREIRGPNAETLQT 699

Query: 1664 TEQVVGEFLGFYKGLLGTAQHTQH-IDEDVINN--GPLLAAENWDSLLRAVSKEEISYAL 1834
            +E++ GE   F+   L       H I  + + N      +  + + L R V+ EEI   L
Sbjct: 700  SEEIKGEAERFFNEFLNRQSGDFHGISVEDLRNLMSYRCSVTDQNILTREVTGEEIQKVL 759

Query: 1835 NDVEYDKSPGPDGFSSKFFKKAWNIVGVDFTEAINEFFVSGRLLKEWNHVTVALIPKTAH 2014
              +  +KSPGPDG++S+FFK  W++ G DF  AI  FFV G L K  N   +ALIPK   
Sbjct: 760  FAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDE 819

Query: 2015 SPKVGDFRPISCCNVFYKVLSKILATRLSSVLDGIIDGAQAAFVKGRSMVDNIHLMQELL 2194
            + ++ D+RPISCCNV YKV+SKILA RL  +L   I   Q+AFVK R +++N+ L  EL+
Sbjct: 820  AIEMKDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELV 879

Query: 2195 RSYNRKRTTPRCTLKIDLRKAFDSVSWTFLREVLDGLGFPPRFVRWVMECVTTASYSLSI 2374
            + Y+++  TPRC +KID+ KAFDSV W FL   L+ L FP  F  W+  C++TA++S+ +
Sbjct: 880  KDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQV 939

Query: 2375 NXXXXXXXXXXXXXRQGDPLSPYLFVICLEYLSRLIRKKTTNTHFNFHPKCGPLNITHLA 2554
            N             RQG  LSPYLFVIC+  LS +I +   + +  +HPKC  + +THL 
Sbjct: 940  NGELAGFFGSSRGLRQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLC 999

Query: 2555 FADDLMMLSRGDPISVKILLDCLDDFGSKSGLKMNILKSNIFMAGIKERDSLNILSFSQL 2734
            FADDLM+   G   S++ +++   +F  +SGL++++ KS I++AG+   D +  LS    
Sbjct: 1000 FADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPF 1059

Query: 2735 TQGSMPFRYLGIPLAAERLKVAHYEELIAKIREYISGWSASTLSYAGRTELIRSVVQGVE 2914
              G +P RYLG+PL  +++  A Y  LI  ++  IS W+A +LSYAGR  L+ SV+  + 
Sbjct: 1060 ANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIA 1119

Query: 2915 CFWLSIFPIPNSVRDKIIQICRNFLWG----TGGKAHIAWTTICLPKDEGGLGIRDLQAW 3082
             FW+S + +P     +I ++C  FLW        KA IAW++IC PK EGGLGI+ L   
Sbjct: 1120 NFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEA 1179

Query: 3083 NHSLLAKTLWNIHARKDSLWYRWIHHYYLHNRPF 3184
            N     K +W + + + SLW  WI  + +    F
Sbjct: 1180 NKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGTF 1213


>emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]
          Length = 1881

 Score =  419 bits (1078), Expect = e-114
 Identities = 282/909 (31%), Positives = 436/909 (47%), Gaps = 20/909 (2%)
 Frame = +2

Query: 500  MIIATWNIRGFNSPLKQDEVFNLIREKNIDVFGLLETKASQQTINKFVDN----RLNGWS 667
            M I +WN RG  S  K+  V + +R +  DV    ETK  ++   +FV +    R   W+
Sbjct: 830  MKIISWNTRGLGSKKKRRVVKDFLRSEKPDVVMFQETK-KEECDRRFVGSVWTARNKDWA 888

Query: 668  SCNNFDLVKGGRIAIFWNMAKVNIEVI---GFHPQVIHTLATCKITQRIFFVSFVYGLHS 838
            +         G I I W+  K++ E +    F   +  TL  C+      ++S VYG ++
Sbjct: 889  ALPACGA--SGGILIIWDTKKLSREEVMLGSFSVSIKFTLNGCES----LWLSAVYGPNN 942

Query: 839  VGDRKPLWEELNRIKQIVGRAWLIMGDFNSILNSNERRNGVPIQPRDIKDFVNCSSVLGL 1018
               RK LW EL+ I  +    W + GDFN I  S+E+  G  + P  +KDF +  S   L
Sbjct: 943  SALRKDLWVELSDIAGLASPRWCVGGDFNVIRRSSEKLGGSRLTP-SMKDFDDFISDCEL 1001

Query: 1019 MDLPSTGHFFTWTN---NTVWSKLDRAMVDNDWIMENPHAAAHFLPSGLSDHSPCVVNIT 1189
            +DLP     FTW+N   N V  +LDR +  N+W    P +    LP   SDH P V+  T
Sbjct: 1002 IDLPLRSASFTWSNMQVNPVCKRLDRFLYSNEWEQTFPQSIQGVLPRWTSDHWPIVLE-T 1060

Query: 1190 NASAAGKTPWRFFNMWTEHDEFMATVRDKW-DITIWGTAQFRLRTKLRELKSCLKTLNDK 1366
            N    G TP+RF NMW +H  F       W +    G    +   KL+ +K+ LK  N  
Sbjct: 1061 NPFKWGPTPFRFENMWLQHPSFKENFGRWWREFQGNGWEGHKFMRKLQFVKAKLKVWNKA 1120

Query: 1367 HFXXXXXXXXXXXXXXXXXXXGLHDDPNNQEIANILPALRERSSFLSNAEKQFFRQKAKS 1546
             F                      +   + E+       +     L   E+  +RQKA+ 
Sbjct: 1121 SFGELSKRKEDILSALVNFDSLEQEGGLSHELLAQRAIKKGELEELILREEIHWRQKARV 1180

Query: 1547 KFIIHSDKCSKFFHAIVKRNAKRNFISSLTRDDGTLTNSTEQVVGEFLGFYKGLL----G 1714
            K++   D  SKFFH +      R FI  L  ++G + N++E +  E L +++ L     G
Sbjct: 1181 KWVKEGDCNSKFFHKVANGRRNRKFIKELENENGQMMNNSESIKEEILRYFEKLYTSPSG 1240

Query: 1715 TAQHTQHIDEDVINNGPLLAAENWDSLLRAVSKEEISYALNDVEYDKSPGPDGFSSKFFK 1894
             +   + +D   I+    +  E+        ++EEI  A+  ++ DK+PGPDGF+   F+
Sbjct: 1241 ESWRVEGLDWSPISGESAVRLES------PFTEEEICKAIFQMDRDKAPGPDGFTIAVFQ 1294

Query: 1895 KAWNIVGVDFTEAINEFFVSGRLLKEWNHVTVALIPKTAHSPKVGDFRPISCCNVFYKVL 2074
              W ++  D  +   EF  SG + +  N   + L+PK + S ++ DFRPIS     YK++
Sbjct: 1295 DCWEVIKEDLVKVFTEFHRSGIINQSTNASFIVLLPKKSMSRRISDFRPISLITSLYKII 1354

Query: 2075 SKILATRLSSVLDGIIDGAQAAFVKGRSMVDNIHLMQELLRSYNRKRTTPRCTLKIDLRK 2254
            +K+LA R+  VL   I   Q AFV+GR ++D + +  E++    R+        KID  K
Sbjct: 1355 AKVLAGRIREVLHETIHSTQGAFVQGRQILDAVLIANEIV-DEKRRSGEEGVVFKIDFEK 1413

Query: 2255 AFDSVSWTFLREVLDGLGFPPRFVRWVMECVTTASYSLSINXXXXXXXXXXXXXRQGDPL 2434
            A+D VSW FL  V++  GF  R+ +W+  C+++ S+++ +N             RQGDPL
Sbjct: 1414 AYDHVSWDFLDHVMEMKGFGIRWRKWMRGCLSSVSFAVLVNGNAKGWVKASRGLRQGDPL 1473

Query: 2435 SPYLFVICLEYLSR-LIRKKTTNTHFNFHPKCGPLNITHLAFADDLMMLSRGDPISVKIL 2611
            SP+LF I  + LSR L++ +  N    F        ++HL FADD +  S      +  L
Sbjct: 1474 SPFLFTIVADVLSRMLLKAEERNVLEGFKVGRNRTRVSHLQFADDTIFFSSSREEDMMTL 1533

Query: 2612 LDCLDDFGSKSGLKMNILKSNIFMAGIKERDSLNILSFSQLTQGSMPFRYLGIPLAAERL 2791
             + L  FG  SGLK+N+ KSNI+   +++     +           P  YLG+PL     
Sbjct: 1534 KNVLLVFGHISGLKVNLDKSNIYGINLEQNHLSRLAEMLDCKASGWPILYLGLPLGGNPK 1593

Query: 2792 KVAHYEELIAKIREYISGWSASTLSYAGRTELIRSVVQGVECFWLSIFPIPNSVRDKIIQ 2971
                ++ +I +I   + GW  + LS+ GR  LI+S +  + C++LS+F IP SV  KI +
Sbjct: 1594 TSGFWDPVIERISRRLDGWQKAYLSFGGRITLIQSCLTHMPCYFLSLFKIPASVAAKIER 1653

Query: 2972 ICRNFLW---GTGGKAHIA-WTTICLPKDEGGLGIRDLQAWNHSLLAKTLWNIHARKDSL 3139
            + R+FLW   G G + H+  W  +C PK  GGLG   +   N +LL K LW       +L
Sbjct: 1654 MQRDFLWSGVGEGKRDHLVNWDVVCKPKSRGGLGFGKISIRNVALLGKWLWRYPREGSAL 1713

Query: 3140 WYRWIHHYY 3166
            W++ I   Y
Sbjct: 1714 WHQVILSIY 1722


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  419 bits (1076), Expect = e-114
 Identities = 263/812 (32%), Positives = 397/812 (48%), Gaps = 92/812 (11%)
 Frame = +2

Query: 1577 KFFHAIVKRNAKRNFISSLTRDDGTLTNSTEQVVGEFLGFYKGLLGTAQHTQHIDEDVIN 1756
            K FH  V     +N I  +   DG +    + +V E   F+K  L      Q I ED + 
Sbjct: 22   KTFHRAVIERETKNMIKEIYCTDGRVVQGDDIMV-EAEKFFKEFL------QLIPEDFVG 74

Query: 1757 -------NGPLLAAENWDS--LLRAVSKEEISYALNDVEYDKSPGPDGFSSKFFKKAWNI 1909
                   +       N D+  L R VS EEI   L  +  DKSPGPDG++S+F+K  W+I
Sbjct: 75   VEVRELQDLLQFRCTNSDNEMLTREVSSEEIKTVLFSMPKDKSPGPDGYTSEFYKATWDI 134

Query: 1910 VGVDFTEAINEFFVSGRLLKEWNHVTVALIPKTAHSPKVGDFRPISCCNVFYKVLSKILA 2089
            +G +FT  +  FF  G L K  N + +ALIPK   + ++ D+RPISCCNV YKV+SKI+A
Sbjct: 135  IGQEFTLPVQSFFQKGFLPKGINSIILALIPKKLAAKEMRDYRPISCCNVLYKVISKIIA 194

Query: 2090 TRLSSVLDGIIDGAQAAFVKGRSMVDNIHLMQELLRSYNRKRTTPRCTLKIDLRKAFDSV 2269
             RL  +L   I   Q+AFVK R +++N+ L  EL++ Y++   + RC +KID+ KAFDSV
Sbjct: 195  NRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDSISARCAIKIDISKAFDSV 254

Query: 2270 SWTFLREVLDGLGFPPRFVRWVMECVTTASYSLSINXXXXXXXXXXXXXRQGDPLSPYLF 2449
             W+FL   L  + F P F+ W+  C+TTAS+S+ +N             RQG  LSPYLF
Sbjct: 255  QWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYLF 314

Query: 2450 VICLEYLSRLIRKKTTNTHFNFHPKCGPLNITHLAFADDLMMLSRGDPISVKILLDCLDD 2629
            VIC++ LS+++ K      F FHPKC  L +THL+FADDLM+LS G   S++ +L+  D+
Sbjct: 315  VICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDE 374

Query: 2630 FGSKSGLKMNILKSNIFMAGIKERDSLNILSFSQLTQGSMPFRYLGIPLAAERLKVAHYE 2809
            F  +SGL++++ KS ++MAG+       I +      G +P RYLG+PL  +RL  A Y 
Sbjct: 375  FCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYS 434

Query: 2810 ELIAKIREYISGWSASTLSYAGRTELIRSVVQGVECFWLSIFPIPNSVRDKIIQICRNFL 2989
             L+ +I++ I+ W+    S+AGR  LI+SV+  +  FWL+ F +P     +I ++C +FL
Sbjct: 435  PLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFL 494

Query: 2990 WG----TGGKAHIAWTTICLPKDEGGLGIRDLQAWNHSLLAKTLWNIHA----------- 3124
            W     +  KA I+W  +C PK EGGLG+R+L+  N     K +W I +           
Sbjct: 495  WSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVA 554

Query: 3125 ----RKDSLWYR-------------------------------------WIHHYYLHNRP 3181
                RK S+W                                       W  H+  H R 
Sbjct: 555  EYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGNGESASFWYDHWSAHGRL 614

Query: 3182 F--------------RDWTVARSDSNLIKNIYSIRTQILHK------YGGNWQKTEQQLV 3301
                           R+ +VA + +   +  +  RT +L++      Y        +  V
Sbjct: 615  IDTVGDKGTIDLGIPREASVADAWTRRSRRRH--RTSLLNEIEEMMAYQRIHHSDAEDTV 672

Query: 3302 NWHSNHQVKGP----KNVYNFFRDAGTKKPWAGIVWASGITPKHSFTLWLAAHKRIQTKD 3469
             W   + V  P    ++ ++  +   +   W   VW    TPK++   WLA H R+ T D
Sbjct: 673  LWRGKNDVFKPHFSTRDTWHLIKATSSTVSWHKGVWFRHATPKYALCTWLAIHNRLPTGD 732

Query: 3470 RL---GHLELEDGTCNFCAAQPETAAHLFFNCPFSAAIWDGIKEWTGISRQMTTLSSAFK 3640
            R+          G C  C    +T  HLFF+C +++ +W  + +    +R  T  S    
Sbjct: 733  RMLKWNSSGSVSGNCVLCTNNSKTLEHLFFSCSYASTVWAALAKGIWKTRYSTRWSHLLT 792

Query: 3641 WLKKEARGTSKKSKGQKIAMATTVYQIWNARN 3736
             +    +   +    + I  A T+Y +W  RN
Sbjct: 793  HISTHFQDRVEGFLTRYIFQA-TIYHVWRERN 823


>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
            putative protein [Arabidopsis thaliana]
          Length = 1141

 Score =  410 bits (1054), Expect = e-111
 Identities = 252/786 (32%), Positives = 402/786 (51%), Gaps = 20/786 (2%)
 Frame = +2

Query: 527  GFNSPLKQDEVFNLIREKNIDVFGLLETKASQQTINKFVDNRLNGWSSCNNFDLVKGGRI 706
            GFN P  ++      +       G++E    Q    KF++  L GW    N+     G+I
Sbjct: 4    GFNIPSHRNGFKKWFKVNRPIFGGVIEKHVKQPKDKKFINALLPGWFFDENYGFSDLGKI 63

Query: 707  AIFWNMAKVNIEVIGFHPQVIHTLATCKI----TQRIFFVSFVYGLHSVGDRKPLWEELN 874
             + W+ + V + ++    Q+I    TC++    ++    +S VY  +    RK LW E+ 
Sbjct: 64   WVLWDPS-VEVVIVAKSLQMI----TCEVLFPNSRTWIVISVVYAANEDDKRKELWREIT 118

Query: 875  RIKQ---IVGRAWLIMGDFNSILNSNERRNGVPIQ-PRDIKDFVNCSSVLGLMDLPSTGH 1042
             +        R W+++GDFN +L+ +E    V +   R I+DF  C     L DL   G 
Sbjct: 119  ALVASPVTFNRPWILLGDFNQVLHPHEHSRHVSLNVDRRIRDFRECLLDAELSDLVYKGS 178

Query: 1043 FFTWTNNT----VWSKLDRAMVDNDWIMENPHAAAHFLPSGLSDHSPCVVNITNASAAGK 1210
             FTW N +    V  K+DR +V+  W    P +   F P   SDH+ C V +       K
Sbjct: 179  SFTWWNKSKTRPVAKKIDRILVNESWSNLFPSSFGLFGPPDFSDHASCGVVLELDPIKAK 238

Query: 1211 TPWRFFNMWTEHDEFMATVRDKWDIT-IWGTAQFRLRTKLRELKSCLKTLNDKHFXXXXX 1387
             P++FFN   ++ EF+  V D W  T + G++ FR+  KL+ LK  +K  +  ++     
Sbjct: 239  RPFKFFNFLLKNPEFLNLVWDVWYSTNVVGSSMFRVSKKLKALKKPIKDFSRLNYSNLEK 298

Query: 1388 XXXXXXXXXXXXXXGLHDDPNNQEIANILPALRERSSFLSNAEKQFFRQKAKSKFIIHSD 1567
                             D+P+ +  A+ L A R +   L+ AE+ FFRQ+++  +    D
Sbjct: 299  RTEEAHETLLSFQNLTLDNPSLENAAHELEAQR-KWQILATAEESFFRQRSRVTWFAEGD 357

Query: 1568 KCSKFFHAIVKRNAKRNFISSLTRDDGTLTNSTEQVVGEFLGFYKGLLGTAQHTQHIDED 1747
              +++FH +       N I++L  D GT  +S + +      +++ LL        +++D
Sbjct: 358  GNTRYFHRMADSRKSVNTITTLVDDSGTQIDSQQGIADHCALYFENLLSDDNDPYSLEQD 417

Query: 1748 VIN-----NGPLLAAENWDSLLRAVSKEEISYALNDVEYDKSPGPDGFSSKFFKKAWNIV 1912
             +N       P     + +++    S E+I  A   +  +K+ GPDGF            
Sbjct: 418  DMNLLLTYRCPYSQVADLEAMF---SDEDIKAAFFGLPSNKACGPDGFP----------- 463

Query: 1913 GVDFTEAINEFFVSGRLLKEWNHVTVALIPKTAHSPKVGDFRPISCCNVFYKVLSKILAT 2092
                T A+ EFF+SG LLK+WN  T+ LIPK  ++    DFRPISC N  YKV++++L  
Sbjct: 464  ---VTAAVREFFISGNLLKQWNATTIVLIPKFPNASCTSDFRPISCMNTLYKVIARLLTD 520

Query: 2093 RLSSVLDGIIDGAQAAFVKGRSMVDNIHLMQELLRSYNRKRTTPRCTLKIDLRKAFDSVS 2272
            RL  +L  +I  +Q+AF+ GR + +N+ L  E++  YN +  + R  LK+DLRKAFDSV 
Sbjct: 521  RLQKLLSCVISPSQSAFLPGRLLAENVLLATEMVHGYNWRNISLRGMLKVDLRKAFDSVR 580

Query: 2273 WTFLREVLDGLGFPPRFVRWVMECVTTASYSLSINXXXXXXXXXXXXXRQGDPLSPYLFV 2452
            W F+   L  LG P +F+ W+ +C++T ++++S+N             RQGDPLSPYLFV
Sbjct: 581  WEFIIAALLALGVPTKFINWIHQCISTPTFTVSVNGCCGGFFKSAKGLRQGDPLSPYLFV 640

Query: 2453 ICLEYLSRLIRKKTTNTHFNFHPKCGPLNITHLAFADDLMMLSRGDPISVKILLDCLDDF 2632
            + +E  S+L+  +  + +  +HPK   L+I+HL FADD+M+   G   S+  + + L+DF
Sbjct: 641  LAMEVFSKLLNSRFDSGYIRYHPKASDLSISHLMFADDVMIFFDGGSSSLHGICETLEDF 700

Query: 2633 GSKSGLKMNILKSNIFMAGIK--ERDSLNILSFSQLTQGSMPFRYLGIPLAAERLKVAHY 2806
             S SGLK+N  KS+ F AG++  ER+SL    F    QG +P RYLG+PL   +L++A Y
Sbjct: 701  ASWSGLKVNNDKSHFFCAGLEQAERNSLAAYGF---PQGCLPIRYLGLPLMCRKLRIAEY 757

Query: 2807 EELIAK 2824
            E L+ K
Sbjct: 758  EPLLEK 763