BLASTX nr result

ID: Rehmannia22_contig00009702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00009702
         (1212 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004295516.1| PREDICTED: DNA polymerase eta-like [Fragaria...   197   6e-48
ref|XP_006355249.1| PREDICTED: DNA polymerase eta-like isoform X...   181   7e-43
gb|EOX96838.1| Y-family DNA polymerase H isoform 2 [Theobroma ca...   181   7e-43
emb|CBI27227.3| unnamed protein product [Vitis vinifera]              179   2e-42
ref|XP_004504644.1| PREDICTED: DNA polymerase eta-like isoform X...   179   2e-42
ref|XP_004504643.1| PREDICTED: DNA polymerase eta-like isoform X...   179   2e-42
ref|XP_004504642.1| PREDICTED: DNA polymerase eta-like isoform X...   179   2e-42
ref|XP_004504641.1| PREDICTED: DNA polymerase eta-like isoform X...   179   2e-42
ref|XP_006355248.1| PREDICTED: DNA polymerase eta-like isoform X...   179   3e-42
ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]    174   9e-41
ref|XP_004228955.1| PREDICTED: DNA polymerase eta-like [Solanum ...   171   6e-40
ref|XP_006585046.1| PREDICTED: DNA polymerase eta-like isoform X...   166   1e-38
ref|XP_003532665.1| PREDICTED: DNA polymerase eta-like isoform X...   166   1e-38
gb|EOX96837.1| Y-family DNA polymerase H isoform 1 [Theobroma ca...   164   7e-38
gb|EMJ14684.1| hypothetical protein PRUPE_ppa022694mg [Prunus pe...   163   1e-37
gb|ESW30854.1| hypothetical protein PHAVU_002G188000g [Phaseolus...   160   7e-37
gb|AAC79146.1| similar to DNA-damage-inducible protein P [Arabid...   148   5e-33
ref|NP_851130.1| Y-family DNA polymerase H [Arabidopsis thaliana...   148   5e-33
ref|NP_568638.2| Y-family DNA polymerase H [Arabidopsis thaliana...   148   5e-33
gb|AAN39011.1| putative translesion synthesis polymerase RAD30 [...   146   1e-32

>ref|XP_004295516.1| PREDICTED: DNA polymerase eta-like [Fragaria vesca subsp. vesca]
          Length = 722

 Score =  197 bits (502), Expect = 6e-48
 Identities = 132/340 (38%), Positives = 183/340 (53%), Gaps = 21/340 (6%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            LRYG  KIQEDA NLF A LREY+G++ V+T+ S  ++W IT LS+SASKIV IPSGT S
Sbjct: 386  LRYGAAKIQEDAFNLFQAALREYLGLFTVKTQGSHNNQWGITSLSVSASKIVPIPSGTAS 445

Query: 181  ITKYFHS-QPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPLAGPQIDTSEGEAGAKHD 357
            ITKYFH  QP++S  T + +D   +++A              +  PQI+    E   K+ 
Sbjct: 446  ITKYFHGHQPSSS--TKQLHDNFIEESAPPSPSGNENYSELNVNKPQIELPCEETRIKYA 503

Query: 358  MPSLDRDGDETEVCKDTLFTTKFANNHNPTFVKMKQQIEGLTDEISFSCAASENDLGSKL 537
             PSL R  D+ ++  D +      N      +     +     E       S+    +K+
Sbjct: 504  DPSLHRPEDKNDLLNDQIPCCSSENQAEDESIHKSLTLSTSGSETRSGVNQSQASQLTKI 563

Query: 538  IQSKMDFV--GPGLKPEKQKRKFEKEKGTSSILRFFHSHNSSSFPEH-AHVKTVQENEA- 705
                  F     G   ++QKRK  K+KGTSSILRFF + + SS P+   HV+  ++ +A 
Sbjct: 564  HSGDHSFKLNMRGFNKQEQKRKTVKDKGTSSILRFFKNQDPSSAPQKLEHVENTEDVKAP 623

Query: 706  ------SSSD--FQENQQPM--------TGTTLSRCNLGQDDSRSDAWSYKSDEIDPAVL 837
                  S SD   + NQ  +        TGT+ +  +   +  R   WSY +DEIDP+V+
Sbjct: 624  LSVGPQSKSDNCLEHNQSEIPKERPVEETGTSTAPGSAQFEQGRG-VWSYNTDEIDPSVI 682

Query: 838  NELPPEIQAEVRASLQPQKRANTAKRGSSIVHYFSPSTNS 957
            +ELPPEIQ E+RA L+P KR N  KRGSSI  YF P+ N+
Sbjct: 683  DELPPEIQQELRAWLRPHKRQNVVKRGSSIADYFLPTRNA 722


>ref|XP_006355249.1| PREDICTED: DNA polymerase eta-like isoform X2 [Solanum tuberosum]
          Length = 697

 Score =  181 bits (458), Expect = 7e-43
 Identities = 122/334 (36%), Positives = 173/334 (51%), Gaps = 18/334 (5%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            LRYG +KI+EDA +LF AGLREY+G+++V+   ++ + W ITGLS+SASKIVAIPSGT S
Sbjct: 385  LRYGTSKIKEDALSLFQAGLREYLGLFNVKISGNQNNGWGITGLSVSASKIVAIPSGTRS 444

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPLA----GPQIDTSEGEAGA 348
            I  YFH+Q  +      S++   QDA               L      P I   E     
Sbjct: 445  IMNYFHNQEESFPQVKLSSEQLIQDAPLLSPSEDSLESGGHLTLQSIEPWIACREENEET 504

Query: 349  KHDMPSLDRDGDETEVCKDTLFTTKFANNHNPTFVKMKQQIEGLTDEISFSCAASENDL- 525
            K+ MP LDR  ++ ++CK                       E L D+++  C++ + ++ 
Sbjct: 505  KYSMP-LDRQEEDKDMCK-----------------------EKLPDKVTSICSSPDAEVY 540

Query: 526  ---GSKLIQSKMDF----VGPGLKPEKQKRKFEKEKGTSSILRFFHSHNSSSFPEHAHVK 684
                    +S  D+    +   L+ E+ KRK  KEKG S+I ++F S  S S  +  H  
Sbjct: 541  RGWEKDQTESSGDYLTVKIRDSLESEEGKRKSNKEKGMSTISQYFQSQLSGSLLKAEHAS 600

Query: 685  TVQENEASS-----SDFQENQQPMTGTTLSRCNL-GQDDSRSDAWSYKSDEIDPAVLNEL 846
            T + +E+SS     S+  +   P  G +    +L GQ   +  AWSY  DEID  +LNEL
Sbjct: 601  TSKLSESSSLSACQSELPQENSPTRGESSVDTHLYGQIKLKRPAWSYDIDEIDQDILNEL 660

Query: 847  PPEIQAEVRASLQPQKRANTAKRGSSIVHYFSPS 948
            P +IQ EV+A L+PQKR NT KR   I  YF P+
Sbjct: 661  PKQIQEEVQAWLRPQKRPNTVKRDLGITRYFLPA 694


>gb|EOX96838.1| Y-family DNA polymerase H isoform 2 [Theobroma cacao]
          Length = 649

 Score =  181 bits (458), Expect = 7e-43
 Identities = 128/338 (37%), Positives = 178/338 (52%), Gaps = 19/338 (5%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            LRYG  KIQEDA NLF AGLREYIG+Y  +++ S    W IT LS+SASKIV IPSGT S
Sbjct: 322  LRYGTAKIQEDAFNLFQAGLREYIGLYGGKSEGSHYSGWGITSLSVSASKIVPIPSGTCS 381

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPLAGPQIDTSEGEAGAKHDM 360
            I KYFH Q ++   + +S +    DA               L  P+ID S  E+  +  +
Sbjct: 382  IAKYFHWQTSSHFSSIQSPENLRMDATHLSPPGNESYSEVNLPEPKIDFSGEESWIEDTI 441

Query: 361  PSLDRDGDETEVCKDTLFTTKFANNHNPTFVKMKQQIEGLTDEIS-FSCAASENDLGSKL 537
            P L     +  V KD           +      K++ +GLT++ S    + ++  L    
Sbjct: 442  PGLGLQEQKINVWKD----------EDLACFPSKKKEDGLTEDTSPLLLSGTQGCLEQNQ 491

Query: 538  IQSKMDFVGPGLKPEKQKRKFE----KEKGTSSILRFFHSHN-SSSFPEHAHVKTVQENE 702
             + + +F     + + + R+ +    K KGTSSIL+FF S N S +     H +TVQ  +
Sbjct: 492  NKQQREFSKDESRFKSEYREQKGTRLKNKGTSSILKFFKSCNPSGASLSQEHDRTVQGTD 551

Query: 703  AS-SSDFQENQQPMT---------GTTLSRCNL--GQDDSRSDAWSYKSDEIDPAVLNEL 846
            A  ++ FQ     +              S C+    QD+ R +AWSY  DEIDP+V++EL
Sbjct: 552  AQLTNGFQSRGHSLAELNEVEVAEENERSSCSYIRDQDERRREAWSYNIDEIDPSVIDEL 611

Query: 847  PPEIQAEVRASLQPQKRANT-AKRGSSIVHYFSPSTNS 957
            P EIQ E++A LQP+KR N   KRGS+I HYFSP+  S
Sbjct: 612  PTEIQDEIQAWLQPRKRPNNIVKRGSTISHYFSPTKKS 649


>emb|CBI27227.3| unnamed protein product [Vitis vinifera]
          Length = 773

 Score =  179 bits (455), Expect = 2e-42
 Identities = 140/389 (35%), Positives = 187/389 (48%), Gaps = 71/389 (18%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            LRYGI KIQEDA NLF AGLREY+G   V+T+ ++   W+IT LS+SASKIVAIP+GT S
Sbjct: 385  LRYGIAKIQEDALNLFQAGLREYLGSCKVKTRANQCSGWSITALSVSASKIVAIPTGTCS 444

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPLAGPQIDTSEGEAGAKHDM 360
            I KYFH Q  +S+   +  D  T++AA                  Q      E    +DM
Sbjct: 445  IMKYFHGQDLSSSSLKQPQDRSTEEAASLSHSGSESYLGLNPRETQKQFPGEETRINYDM 504

Query: 361  PSLDRDGDETEVCKD--TLFTTKFANNHNPT-FVKMKQQIEGLTD----------EISFS 501
            P+LD+   + ++ +D  T    +F   HNPT  +  ++Q+E + D            S S
Sbjct: 505  PNLDQQEKKRKMWEDQGTPSILRFFKRHNPTSSLSEQEQVEPIQDTKVSSSSGLWTTSES 564

Query: 502  C--------------------------AASENDLGSKLIQ---SKMDFVGPGLKPEKQKR 594
            C                          AA  ND G K+     S MD + P ++ E Q R
Sbjct: 565  CSETGQIQLPKEMMVAETESNARRDSSAAKRND-GYKIDDIDCSVMDELPPEIQEEVQAR 623

Query: 595  KFE--------KEKGTSSILRFFHSHNSS--------------SFPEHAHVKTVQENEA- 705
              E        KE   +         +S+              S  +    +  +E +A 
Sbjct: 624  SSEDLNQVQLPKEMMVAETESNARRDSSAAKRNDGYKIDDIDCSVMDELSPEIQEEVQAW 683

Query: 706  SSSDFQENQQPM------TGTTLSRCNLGQDDSRSDAWSYKSDEIDPAVLNELPPEIQAE 867
            SS +  + Q P       TG    RC+LG    R + WSYK DEIDP+V++ELPPEI+AE
Sbjct: 684  SSEELNQVQLPKETMAAETGPNDRRCSLGGGAERRETWSYKIDEIDPSVMDELPPEIRAE 743

Query: 868  VRASLQPQKRANTAKRGSSIVHYFSPSTN 954
            V+A L+PQK A T KRGSSI HYFSP  N
Sbjct: 744  VQAWLRPQKPAKTGKRGSSIAHYFSPMKN 772


>ref|XP_004504644.1| PREDICTED: DNA polymerase eta-like isoform X4 [Cicer arietinum]
          Length = 703

 Score =  179 bits (454), Expect = 2e-42
 Identities = 122/345 (35%), Positives = 167/345 (48%), Gaps = 30/345 (8%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            LRYG TKIQEDA  LF AGLR+++  Y+ +T  ++ + W IT LS+SASKIV IPSGTHS
Sbjct: 378  LRYGTTKIQEDALTLFLAGLRDFLSFYNFKTHGNENNNWGITALSVSASKIVPIPSGTHS 437

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPLAGPQIDTSEGEAGAKHDM 360
            I KYF  +  + + +N+S D    + A               +  Q++  E + G  H  
Sbjct: 438  IAKYFSERFPSGSSSNQSVDDVIDEVAPSSPSGSDNCLGVIPSELQLEYPEEDTGVNHSK 497

Query: 361  PSLDRDGDETEVCKDTLFTTKFANNHNPTFVKMKQQIEGLTDEISFSCAASE-------- 516
              LD                     H      + ++++GLT+E S               
Sbjct: 498  ACLD---------------------HQDLLCNLSEKVDGLTEESSHVALPGNEDRMTRNE 536

Query: 517  --NDLGSKLIQSKMDFVGPGLKP-EKQKRKFEKEKGTSSILRFFHS-HNSSSFPEHAHVK 684
               DL SK  + ++ F    LK  EK+K   +K  G SSI++FF++ HNS S  E  +V 
Sbjct: 537  PYRDLLSK--EPRLAFNASSLKAVEKKKAAGKKPHGNSSIIKFFNNYHNSQSSFEQKNVT 594

Query: 685  TVQ---------ENEASSSDFQENQQPMTG---------TTLSRCNLGQDDSRSDAWSYK 810
              Q            AS S+   NQ  M              S C++      S AWSY 
Sbjct: 595  NAQGVKIPLLHGSQSASGSNLTSNQVEMASEIHQLEEIDANNSGCSIDTMPQGSQAWSYN 654

Query: 811  SDEIDPAVLNELPPEIQAEVRASLQPQKRANTAKRGSSIVHYFSP 945
             DEIDP++++ELPPEIQ E+R  L+P+KR N  KRGSSI  YF P
Sbjct: 655  IDEIDPSIIDELPPEIQEELRTWLRPRKRPNVVKRGSSITQYFRP 699


>ref|XP_004504643.1| PREDICTED: DNA polymerase eta-like isoform X3 [Cicer arietinum]
          Length = 711

 Score =  179 bits (454), Expect = 2e-42
 Identities = 122/345 (35%), Positives = 167/345 (48%), Gaps = 30/345 (8%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            LRYG TKIQEDA  LF AGLR+++  Y+ +T  ++ + W IT LS+SASKIV IPSGTHS
Sbjct: 386  LRYGTTKIQEDALTLFLAGLRDFLSFYNFKTHGNENNNWGITALSVSASKIVPIPSGTHS 445

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPLAGPQIDTSEGEAGAKHDM 360
            I KYF  +  + + +N+S D    + A               +  Q++  E + G  H  
Sbjct: 446  IAKYFSERFPSGSSSNQSVDDVIDEVAPSSPSGSDNCLGVIPSELQLEYPEEDTGVNHSK 505

Query: 361  PSLDRDGDETEVCKDTLFTTKFANNHNPTFVKMKQQIEGLTDEISFSCAASE-------- 516
              LD                     H      + ++++GLT+E S               
Sbjct: 506  ACLD---------------------HQDLLCNLSEKVDGLTEESSHVALPGNEDRMTRNE 544

Query: 517  --NDLGSKLIQSKMDFVGPGLKP-EKQKRKFEKEKGTSSILRFFHS-HNSSSFPEHAHVK 684
               DL SK  + ++ F    LK  EK+K   +K  G SSI++FF++ HNS S  E  +V 
Sbjct: 545  PYRDLLSK--EPRLAFNASSLKAVEKKKAAGKKPHGNSSIIKFFNNYHNSQSSFEQKNVT 602

Query: 685  TVQ---------ENEASSSDFQENQQPMTG---------TTLSRCNLGQDDSRSDAWSYK 810
              Q            AS S+   NQ  M              S C++      S AWSY 
Sbjct: 603  NAQGVKIPLLHGSQSASGSNLTSNQVEMASEIHQLEEIDANNSGCSIDTMPQGSQAWSYN 662

Query: 811  SDEIDPAVLNELPPEIQAEVRASLQPQKRANTAKRGSSIVHYFSP 945
             DEIDP++++ELPPEIQ E+R  L+P+KR N  KRGSSI  YF P
Sbjct: 663  IDEIDPSIIDELPPEIQEELRTWLRPRKRPNVVKRGSSITQYFRP 707


>ref|XP_004504642.1| PREDICTED: DNA polymerase eta-like isoform X2 [Cicer arietinum]
          Length = 717

 Score =  179 bits (454), Expect = 2e-42
 Identities = 122/345 (35%), Positives = 167/345 (48%), Gaps = 30/345 (8%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            LRYG TKIQEDA  LF AGLR+++  Y+ +T  ++ + W IT LS+SASKIV IPSGTHS
Sbjct: 392  LRYGTTKIQEDALTLFLAGLRDFLSFYNFKTHGNENNNWGITALSVSASKIVPIPSGTHS 451

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPLAGPQIDTSEGEAGAKHDM 360
            I KYF  +  + + +N+S D    + A               +  Q++  E + G  H  
Sbjct: 452  IAKYFSERFPSGSSSNQSVDDVIDEVAPSSPSGSDNCLGVIPSELQLEYPEEDTGVNHSK 511

Query: 361  PSLDRDGDETEVCKDTLFTTKFANNHNPTFVKMKQQIEGLTDEISFSCAASE-------- 516
              LD                     H      + ++++GLT+E S               
Sbjct: 512  ACLD---------------------HQDLLCNLSEKVDGLTEESSHVALPGNEDRMTRNE 550

Query: 517  --NDLGSKLIQSKMDFVGPGLKP-EKQKRKFEKEKGTSSILRFFHS-HNSSSFPEHAHVK 684
               DL SK  + ++ F    LK  EK+K   +K  G SSI++FF++ HNS S  E  +V 
Sbjct: 551  PYRDLLSK--EPRLAFNASSLKAVEKKKAAGKKPHGNSSIIKFFNNYHNSQSSFEQKNVT 608

Query: 685  TVQ---------ENEASSSDFQENQQPMTG---------TTLSRCNLGQDDSRSDAWSYK 810
              Q            AS S+   NQ  M              S C++      S AWSY 
Sbjct: 609  NAQGVKIPLLHGSQSASGSNLTSNQVEMASEIHQLEEIDANNSGCSIDTMPQGSQAWSYN 668

Query: 811  SDEIDPAVLNELPPEIQAEVRASLQPQKRANTAKRGSSIVHYFSP 945
             DEIDP++++ELPPEIQ E+R  L+P+KR N  KRGSSI  YF P
Sbjct: 669  IDEIDPSIIDELPPEIQEELRTWLRPRKRPNVVKRGSSITQYFRP 713


>ref|XP_004504641.1| PREDICTED: DNA polymerase eta-like isoform X1 [Cicer arietinum]
          Length = 725

 Score =  179 bits (454), Expect = 2e-42
 Identities = 122/345 (35%), Positives = 167/345 (48%), Gaps = 30/345 (8%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            LRYG TKIQEDA  LF AGLR+++  Y+ +T  ++ + W IT LS+SASKIV IPSGTHS
Sbjct: 400  LRYGTTKIQEDALTLFLAGLRDFLSFYNFKTHGNENNNWGITALSVSASKIVPIPSGTHS 459

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPLAGPQIDTSEGEAGAKHDM 360
            I KYF  +  + + +N+S D    + A               +  Q++  E + G  H  
Sbjct: 460  IAKYFSERFPSGSSSNQSVDDVIDEVAPSSPSGSDNCLGVIPSELQLEYPEEDTGVNHSK 519

Query: 361  PSLDRDGDETEVCKDTLFTTKFANNHNPTFVKMKQQIEGLTDEISFSCAASE-------- 516
              LD                     H      + ++++GLT+E S               
Sbjct: 520  ACLD---------------------HQDLLCNLSEKVDGLTEESSHVALPGNEDRMTRNE 558

Query: 517  --NDLGSKLIQSKMDFVGPGLKP-EKQKRKFEKEKGTSSILRFFHS-HNSSSFPEHAHVK 684
               DL SK  + ++ F    LK  EK+K   +K  G SSI++FF++ HNS S  E  +V 
Sbjct: 559  PYRDLLSK--EPRLAFNASSLKAVEKKKAAGKKPHGNSSIIKFFNNYHNSQSSFEQKNVT 616

Query: 685  TVQ---------ENEASSSDFQENQQPMTG---------TTLSRCNLGQDDSRSDAWSYK 810
              Q            AS S+   NQ  M              S C++      S AWSY 
Sbjct: 617  NAQGVKIPLLHGSQSASGSNLTSNQVEMASEIHQLEEIDANNSGCSIDTMPQGSQAWSYN 676

Query: 811  SDEIDPAVLNELPPEIQAEVRASLQPQKRANTAKRGSSIVHYFSP 945
             DEIDP++++ELPPEIQ E+R  L+P+KR N  KRGSSI  YF P
Sbjct: 677  IDEIDPSIIDELPPEIQEELRTWLRPRKRPNVVKRGSSITQYFRP 721


>ref|XP_006355248.1| PREDICTED: DNA polymerase eta-like isoform X1 [Solanum tuberosum]
          Length = 698

 Score =  179 bits (453), Expect = 3e-42
 Identities = 121/335 (36%), Positives = 173/335 (51%), Gaps = 19/335 (5%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            LRYG +KI+EDA +LF AGLREY+G+++V+   ++ + W ITGLS+SASKIVAIPSGT S
Sbjct: 385  LRYGTSKIKEDALSLFQAGLREYLGLFNVKISGNQNNGWGITGLSVSASKIVAIPSGTRS 444

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDA-----AXXXXXXXXXXXXXPLAGPQIDTSEGEAG 345
            I  YFH+Q  +      S++   QDA     +                 P I   E    
Sbjct: 445  IMNYFHNQEESFPQVKLSSEQLIQDAPLLSPSEEDSLESGGHLTLQSIEPWIACREENEE 504

Query: 346  AKHDMPSLDRDGDETEVCKDTLFTTKFANNHNPTFVKMKQQIEGLTDEISFSCAASENDL 525
             K+ MP LDR  ++ ++CK                       E L D+++  C++ + ++
Sbjct: 505  TKYSMP-LDRQEEDKDMCK-----------------------EKLPDKVTSICSSPDAEV 540

Query: 526  ----GSKLIQSKMDF----VGPGLKPEKQKRKFEKEKGTSSILRFFHSHNSSSFPEHAHV 681
                     +S  D+    +   L+ E+ KRK  KEKG S+I ++F S  S S  +  H 
Sbjct: 541  YRGWEKDQTESSGDYLTVKIRDSLESEEGKRKSNKEKGMSTISQYFQSQLSGSLLKAEHA 600

Query: 682  KTVQENEASS-----SDFQENQQPMTGTTLSRCNL-GQDDSRSDAWSYKSDEIDPAVLNE 843
             T + +E+SS     S+  +   P  G +    +L GQ   +  AWSY  DEID  +LNE
Sbjct: 601  STSKLSESSSLSACQSELPQENSPTRGESSVDTHLYGQIKLKRPAWSYDIDEIDQDILNE 660

Query: 844  LPPEIQAEVRASLQPQKRANTAKRGSSIVHYFSPS 948
            LP +IQ EV+A L+PQKR NT KR   I  YF P+
Sbjct: 661  LPKQIQEEVQAWLRPQKRPNTVKRDLGITRYFLPA 695


>ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]
          Length = 779

 Score =  174 bits (440), Expect = 9e-41
 Identities = 140/395 (35%), Positives = 187/395 (47%), Gaps = 77/395 (19%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            LRYGI KIQEDA NLF AGLREY+G   V+T+ ++   W+IT LS+SASKIVAIP+GT S
Sbjct: 385  LRYGIAKIQEDALNLFQAGLREYLGSCKVKTRANQCSGWSITALSVSASKIVAIPTGTCS 444

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPL------AGPQIDTSEGEA 342
            I KYFH Q  +S+   +  D  T++AA                        Q      E 
Sbjct: 445  IMKYFHGQDLSSSSLKQPQDRSTEEAASLSHSDWGVYSGSESYLGLNPRETQKQFPGEET 504

Query: 343  GAKHDMPSLDRDGDETEVCKD--TLFTTKFANNHNPT-FVKMKQQIEGLTD--------- 486
               +DMP+LD+   + ++ +D  T    +F   HNPT  +  ++Q+E + D         
Sbjct: 505  RINYDMPNLDQQEKKRKMWEDQGTPSILRFFKRHNPTSSLSEQEQVEPIQDTKVSSSSGL 564

Query: 487  -EISFSC--------------------------AASENDLGSKLIQ---SKMDFVGPGLK 576
               S SC                          AA  ND G K+     S MD + P ++
Sbjct: 565  WTTSESCSETGQIQLPKEMMVAETESNARRDSSAAKRND-GYKIDDIDCSVMDELPPEIQ 623

Query: 577  PEKQKRKFE--------KEKGTSSILRFFHSHNSS--------------SFPEHAHVKTV 690
             E Q R  E        KE   +         +S+              S  +    +  
Sbjct: 624  EEVQARSSEDLNQVQLPKEMMVAETESNARRDSSAAKRNDGYKIDDIDCSVMDELSPEIQ 683

Query: 691  QENEA-SSSDFQENQQPM------TGTTLSRCNLGQDDSRSDAWSYKSDEIDPAVLNELP 849
            +E +A SS +  + Q P       TG    RC+LG    R + WSYK DEIDP+V++ELP
Sbjct: 684  EEVQAWSSEELNQVQLPKETMAAETGPNDRRCSLGGGAERRETWSYKIDEIDPSVMDELP 743

Query: 850  PEIQAEVRASLQPQKRANTAKRGSSIVHYFSPSTN 954
            PEI+AEV+A L+PQK A T KRGSSI HYFSP  N
Sbjct: 744  PEIRAEVQAWLRPQKPAKTGKRGSSIAHYFSPMKN 778


>ref|XP_004228955.1| PREDICTED: DNA polymerase eta-like [Solanum lycopersicum]
          Length = 691

 Score =  171 bits (433), Expect = 6e-40
 Identities = 118/326 (36%), Positives = 165/326 (50%), Gaps = 10/326 (3%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            LRYG +KI+EDA +LF AGLREY+G+++V+   ++ + W ITGLS++ASKIVAIPSGT S
Sbjct: 379  LRYGTSKIKEDALSLFQAGLREYLGLFNVKISGNQNNGWGITGLSVTASKIVAIPSGTRS 438

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPLA----GPQIDTSEGEAGA 348
            I  YFH+Q         S++   QDA               L      P I   E     
Sbjct: 439  ILNYFHNQEEAFPQVKLSSEQLIQDAPLLSPSEDSLESGGHLTLQTIEPWIACREENEET 498

Query: 349  KHDMPSLDRDGDETEVCKDTLFTTKFANNHNPTFVKMKQQIEGLTDEISFSCAASENDLG 528
            K+ M SLDR  ++   CK+ L   + +   +P              E+       +N+  
Sbjct: 499  KYSM-SLDRQEEDKNTCKEKLPDKETSICSSP------------DAEVYRGWEKDQNESS 545

Query: 529  SKLIQSKMDFVGPGLKPEKQKRKFEKEKGTSSILRFFHSHNSSSFPEHAHVKTVQENEAS 708
               +  K   +   L+ E  KRK  KEKG S+I R+F S  S S  +  H  T + +E+S
Sbjct: 546  RDYLTVK---IRDSLESEDGKRKSNKEKGMSTISRYFQSQLSGSLLKAEHANTSRLSESS 602

Query: 709  S-----SDFQENQQPMTGTTLSRCNL-GQDDSRSDAWSYKSDEIDPAVLNELPPEIQAEV 870
            S     S+  +   P  G +    +L  Q   +  +WSY  D+ID  VLNELP +IQ EV
Sbjct: 603  SLSDRQSELPQENSPARGESSVDTHLCSQIKLKRPSWSYDIDKIDQDVLNELPKQIQEEV 662

Query: 871  RASLQPQKRANTAKRGSSIVHYFSPS 948
            +A L+PQKR NT K+   I  YF P+
Sbjct: 663  QAWLRPQKRPNTVKKDLGITRYFLPA 688


>ref|XP_006585046.1| PREDICTED: DNA polymerase eta-like isoform X2 [Glycine max]
          Length = 718

 Score =  166 bits (421), Expect = 1e-38
 Identities = 121/343 (35%), Positives = 170/343 (49%), Gaps = 28/343 (8%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            LRYG  KIQEDA  LF AGLR+++G Y+ +   ++ + W +T LS+SASK+V+IPSGTHS
Sbjct: 401  LRYGTRKIQEDALILFQAGLRDFLGFYNCKAHGNENNNWGVTSLSVSASKLVSIPSGTHS 460

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPLAGPQIDTSEGEAGAKHDM 360
            I KYF     +S+ +N+S D+   +AA                 P   +  G        
Sbjct: 461  IVKYFGGSFPSSSTSNQSLDVVIDEAA-----------------PSSPSGSGNCSG---- 499

Query: 361  PSLDRDGDETEVCKDT-LFTTKFANNHNPTFVKMKQQIEGLTDEISF-SCAASEN----- 519
              L  +  E E  +DT +  +K   +       +  + +GLT+E S  S + SE+     
Sbjct: 500  --LVPNEFELEYPEDTGMKDSKACLDQQDPLCHLSCKADGLTEESSLVSPSGSEDRILHN 557

Query: 520  ---------DLGSKLIQSKMDFVGPGLKPEKQKRKFEKEKGTSSILRFFHS-HNSSSFPE 669
                     DL      S +  VG      K+K   +K +G  SI+ FF++ HNS S  E
Sbjct: 558  EPHRDLPATDLRRVSNISSLKAVG------KKKTAGKKLQGNCSIVHFFNNYHNSQSSLE 611

Query: 670  HAHVKTVQENEASSSDFQ-----------ENQQPMTGTTLSRCNLGQDDSRSDAWSYKSD 816
              +VK      + S+D             E+      T  SRC++G        WSY  +
Sbjct: 612  QKNVKISSSLGSHSADNSHSTCIQVEMPAEHPHEEFDTNKSRCSVGNMPQGRQDWSYNIN 671

Query: 817  EIDPAVLNELPPEIQAEVRASLQPQKRANTAKRGSSIVHYFSP 945
            EIDP+++NELPPEIQ E +  L+P KR N AKRGSSI HYFSP
Sbjct: 672  EIDPSIINELPPEIQQEFQIWLRPHKRPNVAKRGSSITHYFSP 714


>ref|XP_003532665.1| PREDICTED: DNA polymerase eta-like isoform X1 [Glycine max]
          Length = 703

 Score =  166 bits (421), Expect = 1e-38
 Identities = 121/343 (35%), Positives = 170/343 (49%), Gaps = 28/343 (8%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            LRYG  KIQEDA  LF AGLR+++G Y+ +   ++ + W +T LS+SASK+V+IPSGTHS
Sbjct: 386  LRYGTRKIQEDALILFQAGLRDFLGFYNCKAHGNENNNWGVTSLSVSASKLVSIPSGTHS 445

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPLAGPQIDTSEGEAGAKHDM 360
            I KYF     +S+ +N+S D+   +AA                 P   +  G        
Sbjct: 446  IVKYFGGSFPSSSTSNQSLDVVIDEAA-----------------PSSPSGSGNCSG---- 484

Query: 361  PSLDRDGDETEVCKDT-LFTTKFANNHNPTFVKMKQQIEGLTDEISF-SCAASEN----- 519
              L  +  E E  +DT +  +K   +       +  + +GLT+E S  S + SE+     
Sbjct: 485  --LVPNEFELEYPEDTGMKDSKACLDQQDPLCHLSCKADGLTEESSLVSPSGSEDRILHN 542

Query: 520  ---------DLGSKLIQSKMDFVGPGLKPEKQKRKFEKEKGTSSILRFFHS-HNSSSFPE 669
                     DL      S +  VG      K+K   +K +G  SI+ FF++ HNS S  E
Sbjct: 543  EPHRDLPATDLRRVSNISSLKAVG------KKKTAGKKLQGNCSIVHFFNNYHNSQSSLE 596

Query: 670  HAHVKTVQENEASSSDFQ-----------ENQQPMTGTTLSRCNLGQDDSRSDAWSYKSD 816
              +VK      + S+D             E+      T  SRC++G        WSY  +
Sbjct: 597  QKNVKISSSLGSHSADNSHSTCIQVEMPAEHPHEEFDTNKSRCSVGNMPQGRQDWSYNIN 656

Query: 817  EIDPAVLNELPPEIQAEVRASLQPQKRANTAKRGSSIVHYFSP 945
            EIDP+++NELPPEIQ E +  L+P KR N AKRGSSI HYFSP
Sbjct: 657  EIDPSIINELPPEIQQEFQIWLRPHKRPNVAKRGSSITHYFSP 699


>gb|EOX96837.1| Y-family DNA polymerase H isoform 1 [Theobroma cacao]
          Length = 704

 Score =  164 bits (415), Expect = 7e-38
 Identities = 120/325 (36%), Positives = 168/325 (51%), Gaps = 19/325 (5%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            LRYG  KIQEDA NLF AGLREYIG+Y  +++ S    W IT LS+SASKIV IPSGT S
Sbjct: 386  LRYGTAKIQEDAFNLFQAGLREYIGLYGGKSEGSHYSGWGITSLSVSASKIVPIPSGTCS 445

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPLAGPQIDTSEGEAGAKHDM 360
            I KYFH Q ++   + +S +    DA               L  P+ID S  E+  +  +
Sbjct: 446  IAKYFHWQTSSHFSSIQSPENLRMDATHLSPPGNESYSEVNLPEPKIDFSGEESWIEDTI 505

Query: 361  PSLDRDGDETEVCKDTLFTTKFANNHNPTFVKMKQQIEGLTDEIS-FSCAASENDLGSKL 537
            P L     +  V KD           +      K++ +GLT++ S    + ++  L    
Sbjct: 506  PGLGLQEQKINVWKD----------EDLACFPSKKKEDGLTEDTSPLLLSGTQGCLEQNQ 555

Query: 538  IQSKMDFVGPGLKPEKQKRKFE----KEKGTSSILRFFHSHN-SSSFPEHAHVKTVQENE 702
             + + +F     + + + R+ +    K KGTSSIL+FF S N S +     H +TVQ  +
Sbjct: 556  NKQQREFSKDESRFKSEYREQKGTRLKNKGTSSILKFFKSCNPSGASLSQEHDRTVQGTD 615

Query: 703  AS-SSDFQENQQPMT---------GTTLSRCNL--GQDDSRSDAWSYKSDEIDPAVLNEL 846
            A  ++ FQ     +              S C+    QD+ R +AWSY  DEIDP+V++EL
Sbjct: 616  AQLTNGFQSRGHSLAELNEVEVAEENERSSCSYIRDQDERRREAWSYNIDEIDPSVIDEL 675

Query: 847  PPEIQAEVRASLQPQKRANT-AKRG 918
            P EIQ E++A LQP+KR N   KRG
Sbjct: 676  PTEIQDEIQAWLQPRKRPNNIVKRG 700


>gb|EMJ14684.1| hypothetical protein PRUPE_ppa022694mg [Prunus persica]
          Length = 678

 Score =  163 bits (413), Expect = 1e-37
 Identities = 114/322 (35%), Positives = 159/322 (49%), Gaps = 3/322 (0%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            LRYG  KIQEDA +LF A LREY+G Y  + + S+ + W IT LS+SASKIV IPSGT S
Sbjct: 386  LRYGTAKIQEDALSLFQAALREYLGSYTAKMQGSQNNHWGITSLSVSASKIVPIPSGTAS 445

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPLAGPQIDTSEGEAGAKHDM 360
            ITKYFH  P+ S+ T +S +   ++A               +  PQI+    E   K+  
Sbjct: 446  ITKYFHGHPSCSS-TKQSQNNLIEEATPVPPSGNESYSEVNVTKPQIEFPGEETMIKYAE 504

Query: 361  PSLDRDGDETEVCKD--TLFTTKFANNHNPTFVKMKQQIEGLTDEISFSCAASENDLGSK 534
             S D+  D+ ++  D  T    +F  N +P                  SCA  +     +
Sbjct: 505  TSSDQLEDKIDLLNDQRTCSILRFFKNQDP------------------SCAPQK----LE 542

Query: 535  LIQSKMDFVGPGLKPEKQKRKFEKEKGTSSILRFFHSHNSSSFPEHAHVKTVQENEASSS 714
             +++  D   P L P          +      RFF +    +  +      + +N    S
Sbjct: 543  HVENTEDVKAPPLSP---GNFCAPPRSLHFAQRFFLNLTYDAGIQSRSNNCLDQNR---S 596

Query: 715  DFQENQQPMTGTTLSRCNLGQ-DDSRSDAWSYKSDEIDPAVLNELPPEIQAEVRASLQPQ 891
            +  + + P      + C   Q +  R  AWSY  DEIDP+V++ELPPEIQ EVRA ++P 
Sbjct: 597  ELPKERPPEDAGDSNVCGSFQIEHRRGGAWSYNIDEIDPSVIDELPPEIQQEVRAWIRPH 656

Query: 892  KRANTAKRGSSIVHYFSPSTNS 957
            KR NT KRGSSI HYF P+ N+
Sbjct: 657  KRHNTVKRGSSIAHYFLPTKNT 678


>gb|ESW30854.1| hypothetical protein PHAVU_002G188000g [Phaseolus vulgaris]
          Length = 699

 Score =  160 bits (406), Expect = 7e-37
 Identities = 120/338 (35%), Positives = 157/338 (46%), Gaps = 23/338 (6%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            LRYG  KIQEDA  LF AGLR+++G Y  +   ++   W +T LS+SASKIV+IPSGTHS
Sbjct: 386  LRYGTRKIQEDALILFQAGLRDFLGSYSFKVHGNENSIWGVTSLSVSASKIVSIPSGTHS 445

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPLAGPQIDTSEGEAGAKHDM 360
            I KYF  Q  +S+ +N S DI   DA                   Q+   +  A  KH  
Sbjct: 446  IAKYFGGQFPSSSTSNPSIDIVIHDAVPSSPSGSENCTGMVPYDLQLQYPD-YAEMKHSN 504

Query: 361  PSLDRDGDETEVCKDTLFTTKFANNHNPTFVKMKQQIEGLTDEISFSCAAS--------- 513
              LD                +  +NH+ T      ++EGLT+E SF   +          
Sbjct: 505  ACLD---------------PQDPSNHSTT------KVEGLTEESSFMSPSGSEDRVTHGE 543

Query: 514  ------ENDLGSKLIQSKMDFVGPGLKPEKQKRKFEKEKGTSSILRFFHS-HNSSSFPEH 672
                  E DL      S +  VG      K+KR  +      SI+  F++ HNS S  E 
Sbjct: 544  PHRVLPEKDLSHVSNLSSLKAVG------KKKRAGKMLHENCSIINIFNNYHNSRSSLEQ 597

Query: 673  AHVKTVQE-------NEASSSDFQENQQPMTGTTLSRCNLGQDDSRSDAWSYKSDEIDPA 831
             +V    +          S+ D          T    C++G    R    SY  DEIDP+
Sbjct: 598  KNVSNAHDVKISLSLESQSADDSYSTCNEEIDTNKGGCSVGVPQGRETWSSYNIDEIDPS 657

Query: 832  VLNELPPEIQAEVRASLQPQKRANTAKRGSSIVHYFSP 945
            +++ELPPEIQ E R  L+PQKR N AKRGSSI HYF P
Sbjct: 658  IIDELPPEIQEEFRTWLRPQKRPNVAKRGSSITHYFLP 695


>gb|AAC79146.1| similar to DNA-damage-inducible protein P [Arabidopsis thaliana]
            gi|9758378|dbj|BAB08827.1| DNA-damage-inducible protein P
            [Arabidopsis thaliana]
          Length = 689

 Score =  148 bits (373), Expect = 5e-33
 Identities = 109/325 (33%), Positives = 162/325 (49%), Gaps = 10/325 (3%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            +RYG+TKIQEDA NLF A LREY+G + ++ + +K   W ITGLS+SASKIV IPSGT S
Sbjct: 403  MRYGVTKIQEDAFNLFQAALREYMGSFGIKPQGNKLETWRITGLSVSASKIVDIPSGTSS 462

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPLAGPQIDTSEGEAGAKHDM 360
            I +YF SQP   T  + S D C Q                   G    T+    G   + 
Sbjct: 463  IMRYFQSQP---TVPSRSADGCVQ-------------------GNVAMTASASEGCS-EQ 499

Query: 361  PSLDRDGDETEVCKDTLFTTKFANNHNPTFVKMKQQIEGLTDEISFSCAASE-NDLGSKL 537
             S +      EV     +T        P F    + I+ ++++   SC ++E  D+ ++ 
Sbjct: 500  RSTETQAAMPEVDTGVTYTL-------PNFENQDKDIDLVSEKDVVSCPSNEATDVSTQS 552

Query: 538  IQSKMDFVGPGLKPEKQKRKF----EKEKGTSSILRFFHSHNSSSFPEHAHVKTVQENEA 705
              +K      G + +K  RK     EK +G  SI+  F ++N++        K   + ++
Sbjct: 553  ESNK------GTQTKKIGRKMNNSKEKNRGMPSIVDIFKNYNAT-----PPSKQETQEDS 601

Query: 706  SSSDFQENQQPMTGTTLSRCNLGQDDSRSDAWSYKSDEIDPAVLNELPPEIQAEVRASLQ 885
            + S   +  +  + +  S+ N   ++SR   W YK+DEID +V +ELP EIQ E+R+ L+
Sbjct: 602  TVSSASKRAKLSSSSHNSQVNQEVEESRETDWGYKTDEIDQSVFDELPVEIQRELRSFLR 661

Query: 886  PQKRANTAK-----RGSSIVHYFSP 945
              K+ NT K       SSI HYF P
Sbjct: 662  TNKQFNTGKSKGDGSTSSIAHYFPP 686


>ref|NP_851130.1| Y-family DNA polymerase H [Arabidopsis thaliana]
            gi|13430742|gb|AAK25993.1|AF360283_1 putative
            DNA-damage-inducible protein P [Arabidopsis thaliana]
            gi|21280927|gb|AAM44927.1| putative DNA-damage-inducible
            protein P [Arabidopsis thaliana]
            gi|332007771|gb|AED95154.1| Y-family DNA polymerase H
            [Arabidopsis thaliana]
          Length = 588

 Score =  148 bits (373), Expect = 5e-33
 Identities = 109/325 (33%), Positives = 162/325 (49%), Gaps = 10/325 (3%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            +RYG+TKIQEDA NLF A LREY+G + ++ + +K   W ITGLS+SASKIV IPSGT S
Sbjct: 302  MRYGVTKIQEDAFNLFQAALREYMGSFGIKPQGNKLETWRITGLSVSASKIVDIPSGTSS 361

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPLAGPQIDTSEGEAGAKHDM 360
            I +YF SQP   T  + S D C Q                   G    T+    G   + 
Sbjct: 362  IMRYFQSQP---TVPSRSADGCVQ-------------------GNVAMTASASEGCS-EQ 398

Query: 361  PSLDRDGDETEVCKDTLFTTKFANNHNPTFVKMKQQIEGLTDEISFSCAASE-NDLGSKL 537
             S +      EV     +T        P F    + I+ ++++   SC ++E  D+ ++ 
Sbjct: 399  RSTETQAAMPEVDTGVTYTL-------PNFENQDKDIDLVSEKDVVSCPSNEATDVSTQS 451

Query: 538  IQSKMDFVGPGLKPEKQKRKF----EKEKGTSSILRFFHSHNSSSFPEHAHVKTVQENEA 705
              +K      G + +K  RK     EK +G  SI+  F ++N++        K   + ++
Sbjct: 452  ESNK------GTQTKKIGRKMNNSKEKNRGMPSIVDIFKNYNAT-----PPSKQETQEDS 500

Query: 706  SSSDFQENQQPMTGTTLSRCNLGQDDSRSDAWSYKSDEIDPAVLNELPPEIQAEVRASLQ 885
            + S   +  +  + +  S+ N   ++SR   W YK+DEID +V +ELP EIQ E+R+ L+
Sbjct: 501  TVSSASKRAKLSSSSHNSQVNQEVEESRETDWGYKTDEIDQSVFDELPVEIQRELRSFLR 560

Query: 886  PQKRANTAK-----RGSSIVHYFSP 945
              K+ NT K       SSI HYF P
Sbjct: 561  TNKQFNTGKSKGDGSTSSIAHYFPP 585


>ref|NP_568638.2| Y-family DNA polymerase H [Arabidopsis thaliana]
            gi|75244699|sp|Q8H2D5.1|POLH_ARATH RecName: Full=DNA
            polymerase eta; AltName: Full=Radiation-sensitive protein
            30; Short=AtRAD30; AltName: Full=Y-family DNA polymerase
            H; Short=AtPOLH gi|23954185|emb|CAC94893.1| putative DNA
            polymerase eta [Arabidopsis thaliana]
            gi|332007772|gb|AED95155.1| Y-family DNA polymerase H
            [Arabidopsis thaliana]
          Length = 672

 Score =  148 bits (373), Expect = 5e-33
 Identities = 109/325 (33%), Positives = 162/325 (49%), Gaps = 10/325 (3%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            +RYG+TKIQEDA NLF A LREY+G + ++ + +K   W ITGLS+SASKIV IPSGT S
Sbjct: 386  MRYGVTKIQEDAFNLFQAALREYMGSFGIKPQGNKLETWRITGLSVSASKIVDIPSGTSS 445

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPLAGPQIDTSEGEAGAKHDM 360
            I +YF SQP   T  + S D C Q                   G    T+    G   + 
Sbjct: 446  IMRYFQSQP---TVPSRSADGCVQ-------------------GNVAMTASASEGCS-EQ 482

Query: 361  PSLDRDGDETEVCKDTLFTTKFANNHNPTFVKMKQQIEGLTDEISFSCAASE-NDLGSKL 537
             S +      EV     +T        P F    + I+ ++++   SC ++E  D+ ++ 
Sbjct: 483  RSTETQAAMPEVDTGVTYTL-------PNFENQDKDIDLVSEKDVVSCPSNEATDVSTQS 535

Query: 538  IQSKMDFVGPGLKPEKQKRKF----EKEKGTSSILRFFHSHNSSSFPEHAHVKTVQENEA 705
              +K      G + +K  RK     EK +G  SI+  F ++N++        K   + ++
Sbjct: 536  ESNK------GTQTKKIGRKMNNSKEKNRGMPSIVDIFKNYNAT-----PPSKQETQEDS 584

Query: 706  SSSDFQENQQPMTGTTLSRCNLGQDDSRSDAWSYKSDEIDPAVLNELPPEIQAEVRASLQ 885
            + S   +  +  + +  S+ N   ++SR   W YK+DEID +V +ELP EIQ E+R+ L+
Sbjct: 585  TVSSASKRAKLSSSSHNSQVNQEVEESRETDWGYKTDEIDQSVFDELPVEIQRELRSFLR 644

Query: 886  PQKRANTAK-----RGSSIVHYFSP 945
              K+ NT K       SSI HYF P
Sbjct: 645  TNKQFNTGKSKGDGSTSSIAHYFPP 669


>gb|AAN39011.1| putative translesion synthesis polymerase RAD30 [Arabidopsis
            thaliana]
          Length = 672

 Score =  146 bits (369), Expect = 1e-32
 Identities = 109/325 (33%), Positives = 161/325 (49%), Gaps = 10/325 (3%)
 Frame = +1

Query: 1    LRYGITKIQEDAHNLFHAGLREYIGIYHVRTKESKPHEWAITGLSISASKIVAIPSGTHS 180
            +RYG+TKIQEDA NLF A LREY+G   ++ + +K   W ITGLS+SASKIV IPSGT S
Sbjct: 386  MRYGVTKIQEDAFNLFQAALREYMGSVGIKPQGNKLETWRITGLSVSASKIVDIPSGTSS 445

Query: 181  ITKYFHSQPNNSTYTNESNDICTQDAAXXXXXXXXXXXXXPLAGPQIDTSEGEAGAKHDM 360
            I +YF SQP   T  + S D C Q                   G    T+    G   + 
Sbjct: 446  IMRYFQSQP---TVPSRSADGCVQ-------------------GNVAMTASASEGCS-EQ 482

Query: 361  PSLDRDGDETEVCKDTLFTTKFANNHNPTFVKMKQQIEGLTDEISFSCAASE-NDLGSKL 537
             S +      EV     +T        P F    + I+ ++++   SC ++E  D+ ++ 
Sbjct: 483  RSTETQAAMPEVDTGVTYTL-------PNFENQDKDIDLVSEKDVVSCPSNEATDVSTQS 535

Query: 538  IQSKMDFVGPGLKPEKQKRKF----EKEKGTSSILRFFHSHNSSSFPEHAHVKTVQENEA 705
              +K      G + +K  RK     EK +G  SI+  F ++N++        K   + ++
Sbjct: 536  ESNK------GTQTKKIGRKMNNSKEKNRGMPSIVDIFKNYNAT-----PPSKQETQEDS 584

Query: 706  SSSDFQENQQPMTGTTLSRCNLGQDDSRSDAWSYKSDEIDPAVLNELPPEIQAEVRASLQ 885
            + S   +  +  + +  S+ N   ++SR   W YK+DEID +V +ELP EIQ E+R+ L+
Sbjct: 585  TVSSASKRAKLSSSSHNSQVNQEVEESRETDWGYKTDEIDQSVFDELPVEIQRELRSFLR 644

Query: 886  PQKRANTAK-----RGSSIVHYFSP 945
              K+ NT K       SSI HYF P
Sbjct: 645  TNKQFNTGKSKGDGSTSSIAHYFPP 669


Top