BLASTX nr result
ID: Rehmannia22_contig00009361
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00009361
(418 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAS82860.1| geranyl diphosphate synthase large subunit [Antir... 100 2e-23
gb|AAW66658.1| geranyl diphosphate synthase [Picrorhiza kurrooa] 92 7e-22
sp|Q42698.1|GGPPS_CATRO RecName: Full=Geranylgeranyl pyrophospha... 100 8e-21
gb|AGL91645.1| geranyl diphosphate synthase large subunit [Catha... 102 7e-20
gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avel... 100 2e-19
gb|AEI53622.1| chloroplast geranylgeranyl diphosphate synthase [... 100 2e-19
gb|ABD92926.2| geranylgeranyl diphosphate synthase [Stevia rebau... 96 1e-18
gb|AFY26193.1| geranylgeranyl diphosphate synthase [Picrorhiza k... 91 1e-18
gb|EMJ05575.1| hypothetical protein PRUPE_ppa007368mg [Prunus pe... 91 3e-18
dbj|BAA86285.1| geranylgeranyl pyrophosphate synthase [Scoparia ... 92 4e-18
gb|AFK49502.1| unknown [Medicago truncatula] 94 2e-17
gb|ACJ83329.1| unknown [Medicago truncatula] 94 2e-17
ref|XP_003629488.1| Geranylgeranyl pyrophosphate synthase [Medic... 94 2e-17
ref|XP_003547995.1| PREDICTED: geranylgeranyl pyrophosphate synt... 93 3e-17
ref|XP_004509239.1| PREDICTED: geranylgeranyl pyrophosphate synt... 93 4e-17
gb|AAF08793.1|AF182828_1 geranyl diphosphate synthase large subu... 93 4e-17
gb|EOX91186.1| Geranylgeranyl pyrophosphate synthase 1 [Theobrom... 92 5e-17
gb|ADG01841.1| geranylgeranyl-diphosphate synthase [Medicago sat... 92 5e-17
dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton su... 92 7e-17
gb|ABR15420.1| geranyl pyrophosphate synthase large subunit [Men... 92 7e-17
>gb|AAS82860.1| geranyl diphosphate synthase large subunit [Antirrhinum majus]
Length = 372
Score = 100 bits (249), Expect(2) = 2e-23
Identities = 54/77 (70%), Positives = 61/77 (79%)
Frame = +3
Query: 186 FSISATLTKQHQEEDIKNSKNDTVSATPTFNFKTYMLQKANSVNKALEDAVSLRDPLKIH 365
FSIS+ LTK QE K SK+ T T +FKTYML+KA+SVNKALE AV L++PLKIH
Sbjct: 54 FSISSILTKNPQESSQKTSKDPTF----TLDFKTYMLEKASSVNKALEQAVLLKEPLKIH 109
Query: 366 ESMRYSLLAGGKRVRPM 416
ESMRYSLLAGGKRVRPM
Sbjct: 110 ESMRYSLLAGGKRVRPM 126
Score = 33.9 bits (76), Expect(2) = 2e-23
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 11/37 (29%)
Frame = +2
Query: 20 MSLVSPITTWS-----------QTKPRSKPILLPHPL 97
MSLV+PITTWS QT RS+ I+LPH +
Sbjct: 1 MSLVNPITTWSTTTTSKSPKNVQTTTRSRSIILPHKI 37
>gb|AAW66658.1| geranyl diphosphate synthase [Picrorhiza kurrooa]
Length = 371
Score = 92.0 bits (227), Expect(2) = 7e-22
Identities = 49/88 (55%), Positives = 62/88 (70%)
Frame = +3
Query: 153 PITKTQITFPSFSISATLTKQHQEEDIKNSKNDTVSATPTFNFKTYMLQKANSVNKALED 332
P K+ I+ + +SA LTK + K TPTF+FK+YMLQKA+SVNKAL+D
Sbjct: 46 PNPKSNISNSNTPLSAILTK--------DQKPQNPPTTPTFDFKSYMLQKADSVNKALDD 97
Query: 333 AVSLRDPLKIHESMRYSLLAGGKRVRPM 416
++ L +PLKI ESMRYSLLAGGKR+RPM
Sbjct: 98 SIPLTEPLKIQESMRYSLLAGGKRIRPM 125
Score = 37.4 bits (85), Expect(2) = 7e-22
Identities = 24/46 (52%), Positives = 27/46 (58%), Gaps = 11/46 (23%)
Frame = +2
Query: 20 MSLVSPITTWSQT-----------KPRSKPILLPHPLKNNLPISLF 124
MSLV+ IT WSQT K + +LPHPL NNLPISLF
Sbjct: 1 MSLVNSIT-WSQTSSILNIQSNISKKLTPFSILPHPLTNNLPISLF 45
>sp|Q42698.1|GGPPS_CATRO RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1063276|emb|CAA63486.1| geranylgeranyl pyrophosphate
synthase [Catharanthus roseus]
Length = 357
Score = 99.8 bits (247), Expect(2) = 8e-21
Identities = 53/89 (59%), Positives = 66/89 (74%), Gaps = 2/89 (2%)
Frame = +3
Query: 156 ITKTQITFPSFSISATLTKQH--QEEDIKNSKNDTVSATPTFNFKTYMLQKANSVNKALE 329
I K + SISA +TK+ +E + K+ K S++ +F+FK YM+ KANSVNKALE
Sbjct: 23 IRKPIFSCSRLSISAIITKEQTQEESESKSKKEVAFSSSSSFDFKAYMIGKANSVNKALE 82
Query: 330 DAVSLRDPLKIHESMRYSLLAGGKRVRPM 416
DAV +R+PLKIHESMRYSLLAGGKRVRPM
Sbjct: 83 DAVLVREPLKIHESMRYSLLAGGKRVRPM 111
Score = 26.2 bits (56), Expect(2) = 8e-21
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 83 LPHPLKNNLPISLF 124
L HPLKN LPIS F
Sbjct: 5 LCHPLKNQLPISFF 18
>gb|AGL91645.1| geranyl diphosphate synthase large subunit [Catharanthus roseus]
Length = 383
Score = 102 bits (253), Expect = 7e-20
Identities = 58/118 (49%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
Frame = +3
Query: 69 QNPFFSPTHSRTTYPFLSXXXXXXXXXXPITKTQITFPSFSISATLTKQH--QEEDIKNS 242
+N S S +P + I K + SISA +TK+ +E + K+
Sbjct: 20 ENGRSSSMRSNLCHPLKNQLPISFFLSGTIRKPIFSCSRLSISAIITKEQTQEESESKSK 79
Query: 243 KNDTVSATPTFNFKTYMLQKANSVNKALEDAVSLRDPLKIHESMRYSLLAGGKRVRPM 416
K S+T +F+FK YM+ KANSVNKALEDAV +R+PLKIHESMRYSLLAGGKRVRPM
Sbjct: 80 KEVAFSSTSSFDFKAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPM 137
>gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
Length = 373
Score = 100 bits (250), Expect = 2e-19
Identities = 54/85 (63%), Positives = 64/85 (75%)
Frame = +3
Query: 162 KTQITFPSFSISATLTKQHQEEDIKNSKNDTVSATPTFNFKTYMLQKANSVNKALEDAVS 341
K + + S S+SA LTK ED + ++ S TFNFKTYMLQKANSVN+AL+ AVS
Sbjct: 47 KRRRSISSVSVSAVLTK----EDTLREEEESESEARTFNFKTYMLQKANSVNQALDAAVS 102
Query: 342 LRDPLKIHESMRYSLLAGGKRVRPM 416
L+DP KIHE+MRYSLLAGGKRVRPM
Sbjct: 103 LKDPRKIHEAMRYSLLAGGKRVRPM 127
>gb|AEI53622.1| chloroplast geranylgeranyl diphosphate synthase [Catharanthus
roseus]
Length = 383
Score = 100 bits (249), Expect = 2e-19
Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
Frame = +3
Query: 69 QNPFFSPTHSRTTYPFLSXXXXXXXXXXPITKTQITFPSFSISATLTKQH--QEEDIKNS 242
+N S S +P + I K + SISA +TK+ +E + K+
Sbjct: 20 ENGRSSSMRSNLCHPLKNQLPISFFLSGTIRKPIFSCSRLSISAIITKEQTQEESESKSK 79
Query: 243 KNDTVSATPTFNFKTYMLQKANSVNKALEDAVSLRDPLKIHESMRYSLLAGGKRVRPM 416
K S++ +F+FK YM+ KANSVNKALEDAV +R+PLKIHESMRYSLLAGGKRVRPM
Sbjct: 80 KEVAFSSSSSFDFKAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPM 137
>gb|ABD92926.2| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
Length = 361
Score = 95.5 bits (236), Expect(2) = 1e-18
Identities = 49/82 (59%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Frame = +3
Query: 174 TFPSFS-ISATLTKQHQEEDIKNSKNDTVSATPTFNFKTYMLQKANSVNKALEDAVSLRD 350
+ PSFS +SA LT++HQ +N+ T TP FNF +YML+K N VN+AL+ +V L+D
Sbjct: 36 SLPSFSSVSAILTEKHQSNPSENNNLQTHLETP-FNFDSYMLEKVNMVNEALDASVPLKD 94
Query: 351 PLKIHESMRYSLLAGGKRVRPM 416
P+KIHESMRYSLLAGGKR+RPM
Sbjct: 95 PIKIHESMRYSLLAGGKRIRPM 116
Score = 23.1 bits (48), Expect(2) = 1e-18
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 20 MSLVSPITTWSQTKPRSKPILLPHPLKNNLPIS 118
M+LV+P + T R++P L +P + P+S
Sbjct: 1 MALVNPTALFYGTSIRTRPTNLLNPTQKLRPVS 33
>gb|AFY26193.1| geranylgeranyl diphosphate synthase [Picrorhiza kurrooa]
Length = 354
Score = 90.5 bits (223), Expect(2) = 1e-18
Identities = 40/59 (67%), Positives = 52/59 (88%)
Frame = +3
Query: 240 SKNDTVSATPTFNFKTYMLQKANSVNKALEDAVSLRDPLKIHESMRYSLLAGGKRVRPM 416
+K+ +PTF+FK+YML+KANSVNKAL+D++ L +PLKIHESMRYSLLAGGKR+RP+
Sbjct: 50 TKDQNFETSPTFDFKSYMLEKANSVNKALDDSIPLTEPLKIHESMRYSLLAGGKRIRPL 108
Score = 28.1 bits (61), Expect(2) = 1e-18
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2
Query: 20 MSLVSPITTWSQTKPRSKPILLPHPLKNNLPISLF 124
MSLV+ S+ P S +LPHPL N LPI LF
Sbjct: 1 MSLVN-----SRLTPSS---ILPHPLTNRLPIFLF 27
>gb|EMJ05575.1| hypothetical protein PRUPE_ppa007368mg [Prunus persica]
Length = 370
Score = 90.9 bits (224), Expect(2) = 3e-18
Identities = 51/88 (57%), Positives = 63/88 (71%)
Frame = +3
Query: 153 PITKTQITFPSFSISATLTKQHQEEDIKNSKNDTVSATPTFNFKTYMLQKANSVNKALED 332
P + + T P FS+SA LTKQ + + SA P+FNFK+YMLQ A+SVN+AL+
Sbjct: 45 PPKRRRSTSP-FSVSAILTKQQ-------TLKEEESAKPSFNFKSYMLQTADSVNQALDA 96
Query: 333 AVSLRDPLKIHESMRYSLLAGGKRVRPM 416
AV LRDP IHE+MRYSLLAGGKRVRP+
Sbjct: 97 AVPLRDPAMIHEAMRYSLLAGGKRVRPV 124
Score = 26.2 bits (56), Expect(2) = 3e-18
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 59 KPRSKPILLPHPLKNNLPIS 118
+ RS+ L HPLK N+P+S
Sbjct: 23 RSRSQSFSLVHPLKTNMPVS 42
>dbj|BAA86285.1| geranylgeranyl pyrophosphate synthase [Scoparia dulcis]
Length = 351
Score = 91.7 bits (226), Expect(2) = 4e-18
Identities = 49/80 (61%), Positives = 58/80 (72%)
Frame = +3
Query: 177 FPSFSISATLTKQHQEEDIKNSKNDTVSATPTFNFKTYMLQKANSVNKALEDAVSLRDPL 356
F ISA LTK++ + + TF+FK YML+KA+SVNKALE AVSL++PL
Sbjct: 37 FAGKPISAVLTKEYSHQ-----------TSSTFDFKKYMLEKASSVNKALESAVSLKEPL 85
Query: 357 KIHESMRYSLLAGGKRVRPM 416
KIHESMRYSLLAGGKRVRPM
Sbjct: 86 KIHESMRYSLLAGGKRVRPM 105
Score = 25.0 bits (53), Expect(2) = 4e-18
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = +2
Query: 20 MSLVSPITTWSQTKPRSKPILLPHPL---KNNLPIS 118
MSLV+P++TW P + P P +LPIS
Sbjct: 1 MSLVNPVSTW--PNPTRSSVFRPKPAILNTTHLPIS 34
>gb|AFK49502.1| unknown [Medicago truncatula]
Length = 235
Score = 94.0 bits (232), Expect = 2e-17
Identities = 48/78 (61%), Positives = 60/78 (76%)
Frame = +3
Query: 183 SFSISATLTKQHQEEDIKNSKNDTVSATPTFNFKTYMLQKANSVNKALEDAVSLRDPLKI 362
SFS+S+ LTKQ E + + P FNFK+YM++KA VNKAL+DAVSLR+PLK+
Sbjct: 57 SFSVSSLLTKQEPIEAEEQN--------PIFNFKSYMIEKATRVNKALDDAVSLREPLKV 108
Query: 363 HESMRYSLLAGGKRVRPM 416
HE+MRYSLLAGGKRVRP+
Sbjct: 109 HEAMRYSLLAGGKRVRPV 126
>gb|ACJ83329.1| unknown [Medicago truncatula]
Length = 214
Score = 94.0 bits (232), Expect = 2e-17
Identities = 48/78 (61%), Positives = 60/78 (76%)
Frame = +3
Query: 183 SFSISATLTKQHQEEDIKNSKNDTVSATPTFNFKTYMLQKANSVNKALEDAVSLRDPLKI 362
SFS+S+ LTKQ E + + P FNFK+YM++KA VNKAL+DAVSLR+PLK+
Sbjct: 57 SFSVSSLLTKQEPIEAEEQN--------PIFNFKSYMIEKATRVNKALDDAVSLREPLKV 108
Query: 363 HESMRYSLLAGGKRVRPM 416
HE+MRYSLLAGGKRVRP+
Sbjct: 109 HEAMRYSLLAGGKRVRPV 126
>ref|XP_003629488.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|295322741|gb|ADG01842.1| geranylgeranyl-diphosphate
synthase [Medicago truncatula]
gi|355523510|gb|AET03964.1| Geranylgeranyl pyrophosphate
synthase [Medicago truncatula]
Length = 372
Score = 94.0 bits (232), Expect = 2e-17
Identities = 48/78 (61%), Positives = 60/78 (76%)
Frame = +3
Query: 183 SFSISATLTKQHQEEDIKNSKNDTVSATPTFNFKTYMLQKANSVNKALEDAVSLRDPLKI 362
SFS+S+ LTKQ E + + P FNFK+YM++KA VNKAL+DAVSLR+PLK+
Sbjct: 57 SFSVSSLLTKQEPIEAEEQN--------PIFNFKSYMIEKATRVNKALDDAVSLREPLKV 108
Query: 363 HESMRYSLLAGGKRVRPM 416
HE+MRYSLLAGGKRVRP+
Sbjct: 109 HEAMRYSLLAGGKRVRPV 126
>ref|XP_003547995.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 367
Score = 93.2 bits (230), Expect = 3e-17
Identities = 49/88 (55%), Positives = 62/88 (70%)
Frame = +3
Query: 153 PITKTQITFPSFSISATLTKQHQEEDIKNSKNDTVSATPTFNFKTYMLQKANSVNKALED 332
PI+ + SF++SA LTK+ E T P F+FK YM+ KA++VNKAL+D
Sbjct: 42 PISSLTVAKRSFTLSAVLTKEDTVE--------TEEKPPIFDFKNYMVSKASAVNKALDD 93
Query: 333 AVSLRDPLKIHESMRYSLLAGGKRVRPM 416
AVSLR+P KIHE+MRYSLLAGGKRVRP+
Sbjct: 94 AVSLREPQKIHEAMRYSLLAGGKRVRPV 121
>ref|XP_004509239.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cicer arietinum]
Length = 374
Score = 92.8 bits (229), Expect = 4e-17
Identities = 48/78 (61%), Positives = 57/78 (73%)
Frame = +3
Query: 183 SFSISATLTKQHQEEDIKNSKNDTVSATPTFNFKTYMLQKANSVNKALEDAVSLRDPLKI 362
SFS+S+ LTKQ E N P FNFKTYM++KA VN+AL DAVSLR+P K+
Sbjct: 60 SFSVSSLLTKQETLETEDN---------PIFNFKTYMIEKATRVNQALNDAVSLREPFKV 110
Query: 363 HESMRYSLLAGGKRVRPM 416
HE+MRYSLLAGGKRVRP+
Sbjct: 111 HEAMRYSLLAGGKRVRPV 128
>gb|AAF08793.1|AF182828_1 geranyl diphosphate synthase large subunit [Mentha x piperita]
gi|10637876|emb|CAC10561.1| gpp synthase large subunit
[Mentha x piperita] gi|158979013|gb|ABW86879.1| geranyl
pyrophosphate synthase large subunit [Mentha x piperita]
Length = 377
Score = 92.8 bits (229), Expect = 4e-17
Identities = 57/124 (45%), Positives = 70/124 (56%)
Frame = +3
Query: 45 HGHKQNPDQNPFFSPTHSRTTYPFLSXXXXXXXXXXPITKTQITFPSFSISATLTKQHQE 224
HG ++ ++ F RT PF P T FS+SA TK+ E
Sbjct: 21 HGGRRRRSRSTLFQSHPLRTEMPF--SLYFSSPLKAPAT--------FSVSAVYTKEGSE 70
Query: 225 EDIKNSKNDTVSATPTFNFKTYMLQKANSVNKALEDAVSLRDPLKIHESMRYSLLAGGKR 404
K+ S +P F+F YML+KA SVNKALE AV +++PLKIHESMRYSLLAGGKR
Sbjct: 71 I---RDKDPAPSTSPAFDFDGYMLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAGGKR 127
Query: 405 VRPM 416
VRPM
Sbjct: 128 VRPM 131
>gb|EOX91186.1| Geranylgeranyl pyrophosphate synthase 1 [Theobroma cacao]
Length = 370
Score = 92.4 bits (228), Expect = 5e-17
Identities = 49/75 (65%), Positives = 61/75 (81%)
Frame = +3
Query: 189 SISATLTKQHQEEDIKNSKNDTVSATPTFNFKTYMLQKANSVNKALEDAVSLRDPLKIHE 368
SISA LTK E+ IK + D P+F+FK+YM+QKA++VN+AL+ AVSLRDP+KIHE
Sbjct: 54 SISAVLTK---EDTIKEEEQDPQK--PSFDFKSYMVQKASTVNQALDSAVSLRDPVKIHE 108
Query: 369 SMRYSLLAGGKRVRP 413
+MRYSLLAGGKRVRP
Sbjct: 109 AMRYSLLAGGKRVRP 123
>gb|ADG01841.1| geranylgeranyl-diphosphate synthase [Medicago sativa]
Length = 370
Score = 92.4 bits (228), Expect = 5e-17
Identities = 49/88 (55%), Positives = 62/88 (70%)
Frame = +3
Query: 153 PITKTQITFPSFSISATLTKQHQEEDIKNSKNDTVSATPTFNFKTYMLQKANSVNKALED 332
PI + SFS+ + LTKQ E + + P FNFK+YM++KA VNKAL+D
Sbjct: 45 PIKPSSKPNSSFSVLSLLTKQEPIEAEEQN--------PIFNFKSYMIEKATRVNKALDD 96
Query: 333 AVSLRDPLKIHESMRYSLLAGGKRVRPM 416
AVSLR+PLK+HE+MRYSLLAGGKRVRP+
Sbjct: 97 AVSLREPLKVHEAMRYSLLAGGKRVRPV 124
>dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton sublyratus]
Length = 368
Score = 92.0 bits (227), Expect = 7e-17
Identities = 47/74 (63%), Positives = 61/74 (82%)
Frame = +3
Query: 192 ISATLTKQHQEEDIKNSKNDTVSATPTFNFKTYMLQKANSVNKALEDAVSLRDPLKIHES 371
+SA +TK EE I+ +N S++ F+FK+YM+QKA+++N+ALE AVSLR+PLKIHES
Sbjct: 50 VSAIVTKD--EETIQEEQNKNSSSSLGFDFKSYMVQKASAINQALEAAVSLREPLKIHES 107
Query: 372 MRYSLLAGGKRVRP 413
MRYSLLAGGKRVRP
Sbjct: 108 MRYSLLAGGKRVRP 121
>gb|ABR15420.1| geranyl pyrophosphate synthase large subunit [Mentha canadensis]
Length = 377
Score = 92.0 bits (227), Expect = 7e-17
Identities = 48/78 (61%), Positives = 58/78 (74%)
Frame = +3
Query: 183 SFSISATLTKQHQEEDIKNSKNDTVSATPTFNFKTYMLQKANSVNKALEDAVSLRDPLKI 362
+FS+SA TK+ E K+ S +P F+F YML+KA SVNKALE AV +++PLKI
Sbjct: 57 TFSVSAVYTKEGSEI---RDKDPAPSTSPAFDFDGYMLRKAKSVNKALEAAVQMKEPLKI 113
Query: 363 HESMRYSLLAGGKRVRPM 416
HESMRYSLLAGGKRVRPM
Sbjct: 114 HESMRYSLLAGGKRVRPM 131