BLASTX nr result
ID: Rehmannia22_contig00009357
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00009357
(782 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,... 191 3e-46
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,... 182 1e-43
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ... 175 2e-41
ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,... 166 1e-38
ref|XP_002333134.1| predicted protein [Populus trichocarpa] 164 4e-38
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro... 162 2e-37
gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe... 161 3e-37
gb|EMJ20208.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe... 161 3e-37
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,... 157 5e-36
ref|XP_002331841.1| predicted protein [Populus trichocarpa] 154 3e-35
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,... 154 4e-35
gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao] gi|508... 153 7e-35
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,... 152 1e-34
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,... 151 3e-34
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis] 150 5e-34
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr... 146 7e-33
ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago t... 145 2e-32
gb|AFK49090.1| unknown [Medicago truncatula] 143 6e-32
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [... 140 4e-31
ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glyci... 135 1e-29
>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Solanum tuberosum]
Length = 516
Score = 191 bits (484), Expect = 3e-46
Identities = 110/191 (57%), Positives = 141/191 (73%), Gaps = 2/191 (1%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEVN 394
MGVVTVSSSA+R+P+GL++R STR+ LKRPVI+SFK DK+KNT LIAP+ES++L +E +
Sbjct: 1 MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETS 60
Query: 395 KENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 574
KEN KR R+V KRSERV AV+ EA PSTLELDYSEAAAKLE+IYKRS T S+ +V
Sbjct: 61 KENEKRSRRVSKRSERVHAVAI-EASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQD 119
Query: 575 XXXXXXXXXXXXNGE-VEETEKKTAENFVRSQRK-GKRMGLEKRIALKMKKEGEFVASSE 748
E EE +K+ A+N V+++RK KR+ L++RIAL KEGE VASSE
Sbjct: 120 HLVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSE 179
Query: 749 KKKQSKNDEDE 781
++K ++ EDE
Sbjct: 180 RRKLKEDTEDE 190
>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform 1 [Solanum
lycopersicum]
Length = 516
Score = 182 bits (462), Expect = 1e-43
Identities = 103/191 (53%), Positives = 139/191 (72%), Gaps = 2/191 (1%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEVN 394
MGVVTVSSSA+R+P+GL++R S R+ LKRPVI+SFK D +KNT L++P+ES++ P+E +
Sbjct: 1 MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60
Query: 395 KENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 574
KEN KR R+V KR+ERV AV T EAPPSTLELDYSEAAAKLE+IYKRS T + +V
Sbjct: 61 KENEKRSRRVSKRTERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119
Query: 575 XXXXXXXXXXXXNGEV-EETEKKTAENFVRSQR-KGKRMGLEKRIALKMKKEGEFVASSE 748
E EE +K+ +N V+++R K KR+ L++RIAL KEG+ +ASSE
Sbjct: 120 HLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSE 179
Query: 749 KKKQSKNDEDE 781
++K +++ EDE
Sbjct: 180 RRKLNEDTEDE 190
>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|302143685|emb|CBI22546.3| unnamed protein product
[Vitis vinifera]
Length = 518
Score = 175 bits (443), Expect = 2e-41
Identities = 97/192 (50%), Positives = 133/192 (69%), Gaps = 4/192 (2%)
Frame = +2
Query: 215 MGVVTVSSSAA--RTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVE 388
MGVVTVSSSA+ RTP GLN + S + L+RP++L+FK+DK+KN AL+ P E + LP+E
Sbjct: 1 MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60
Query: 389 VNKENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-ED 565
+K++ KRLR+ K S+RV AVSTDE P ++ELDY+EAAAKLENIYK SPAT VS+ ED
Sbjct: 61 TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAED 120
Query: 566 VXXXXXXXXXXXXXXNGEVEETEKKTAENFVR-SQRKGKRMGLEKRIALKMKKEGEFVAS 742
+ ++ EK+ ++N VR +K KR+ LEKRIAL K+ + VAS
Sbjct: 121 LERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVAS 180
Query: 743 SEKKKQSKNDED 778
+KK+ SKN+++
Sbjct: 181 IQKKRDSKNEDE 192
>ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform 2 [Solanum
lycopersicum]
Length = 487
Score = 166 bits (419), Expect = 1e-38
Identities = 99/184 (53%), Positives = 130/184 (70%), Gaps = 3/184 (1%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEVN 394
MGVVTVSSSA+R+P+GL++R S R+ LKRPVI+SFK D +KNT L++P+ES++ P+E +
Sbjct: 1 MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60
Query: 395 KENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 574
KEN KR R+V KR+ERV AV T EAPPSTLELDYSEAAAKLE+IYKRS T + +V
Sbjct: 61 KENEKRSRRVSKRTERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119
Query: 575 XXXXXXXXXXXXNGEV-EETEKKTAENFVRSQR-KGKRMGLEKRIALKMKKEGEF-VASS 745
E EE +K+ +N V+++R K KR+ L++RIAL KEG +AS
Sbjct: 120 HLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGATDLASL 179
Query: 746 EKKK 757
+ KK
Sbjct: 180 DWKK 183
>ref|XP_002333134.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 164 bits (414), Expect = 4e-38
Identities = 96/191 (50%), Positives = 129/191 (67%), Gaps = 2/191 (1%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEVN 394
MGVV+VSSSA+RTP+GL+T+ ST S KRP+I++FK+DKS NT+L+AP E + LPVE
Sbjct: 1 MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETT 60
Query: 395 KENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 571
K KRL K KK S R+ AV T E P TL +DY+EAAAKLENIYK SP T SD ED
Sbjct: 61 K-GKKRLGKSKKSSNRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDAS 118
Query: 572 XXXXXXXXXXXXXNGEVEETEKKTAENFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSE 748
+ +ETE +T + VR++ +K KR+ LEKRI+L++K E + V+S+
Sbjct: 119 GVIRRGRQRKRKISEGGKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAG 178
Query: 749 KKKQSKNDEDE 781
K+K KN+ ++
Sbjct: 179 KRKDRKNENEK 189
>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
sigma subunit SigE family protein [Populus trichocarpa]
Length = 512
Score = 162 bits (409), Expect = 2e-37
Identities = 95/191 (49%), Positives = 129/191 (67%), Gaps = 2/191 (1%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEVN 394
MGVV+VSSSA+RTP+GL+T+ ST S KRP+I++FK++KS NT+L+AP E + LPVE
Sbjct: 1 MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETT 60
Query: 395 KENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 571
K KRL K KK S R+ AV T E P TL +DY+EAAAKLENIYK SP T SD ED
Sbjct: 61 K-GKKRLGKSKKSSNRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDAS 118
Query: 572 XXXXXXXXXXXXXNGEVEETEKKTAENFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSE 748
+ +ETE +T + VR++ +K KR+ LEKRI+L++K E + V+S+
Sbjct: 119 GVIRRGRQRKRKISEGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAG 178
Query: 749 KKKQSKNDEDE 781
K+K KN+ ++
Sbjct: 179 KRKDRKNENEK 189
>gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
Length = 519
Score = 161 bits (407), Expect = 3e-37
Identities = 84/193 (43%), Positives = 134/193 (69%), Gaps = 4/193 (2%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEVN 394
MGVVTVSSSA+RTP+GL+T+ + + S L++P+I++FK+D++ TAL+AP+E + LP+E
Sbjct: 1 MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60
Query: 395 KENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD--EDV 568
K++ KRL K +K ++ V + +TD A P TLE+DY+EAAAKLEN+YKRSP T + EDV
Sbjct: 61 KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 120
Query: 569 XXXXXXXXXXXXXXN-GEVEETEKKTAENFVRSQ-RKGKRMGLEKRIALKMKKEGEFVAS 742
+ + ++ E +T+ VR++ +K KR+ L KR+ALK K+ + ++S
Sbjct: 121 DGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISS 180
Query: 743 SEKKKQSKNDEDE 781
+K++S+ +E+E
Sbjct: 181 IVRKRKSRKNENE 193
>gb|EMJ20208.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
Length = 390
Score = 161 bits (407), Expect = 3e-37
Identities = 84/193 (43%), Positives = 134/193 (69%), Gaps = 4/193 (2%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEVN 394
MGVVTVSSSA+RTP+GL+T+ + + S L++P+I++FK+D++ TAL+AP+E + LP+E
Sbjct: 1 MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60
Query: 395 KENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD--EDV 568
K++ KRL K +K ++ V + +TD A P TLE+DY+EAAAKLEN+YKRSP T + EDV
Sbjct: 61 KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 120
Query: 569 XXXXXXXXXXXXXXN-GEVEETEKKTAENFVRSQ-RKGKRMGLEKRIALKMKKEGEFVAS 742
+ + ++ E +T+ VR++ +K KR+ L KR+ALK K+ + ++S
Sbjct: 121 DGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISS 180
Query: 743 SEKKKQSKNDEDE 781
+K++S+ +E+E
Sbjct: 181 IVRKRKSRKNENE 193
>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 514
Score = 157 bits (396), Expect = 5e-36
Identities = 92/190 (48%), Positives = 118/190 (62%), Gaps = 1/190 (0%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEVN 394
MGVVTVSS+AARTP L + S S LKRP I++FK+DK NT L++P E VTLPVE N
Sbjct: 1 MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60
Query: 395 KENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 574
KR K +RV AV DEA P +L+LDY+EAAAKLENI+K SP T SD++
Sbjct: 61 NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKE--- 117
Query: 575 XXXXXXXXXXXXNGEVEETEKKTAENFVRSQRKG-KRMGLEKRIALKMKKEGEFVASSEK 751
+++ + + VR+Q K KR+ L+KRIALK KKEG+ VA K
Sbjct: 118 ---CKDGRSKRGQKRSKKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRK 174
Query: 752 KKQSKNDEDE 781
+K +KN+ DE
Sbjct: 175 QKDTKNEADE 184
>ref|XP_002331841.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 154 bits (389), Expect = 3e-35
Identities = 91/191 (47%), Positives = 126/191 (65%), Gaps = 2/191 (1%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEVN 394
MG+V+VSSSA+ TP+G +T+ ST S KRP+I++FK+DKS TAL+AP E + LP+E
Sbjct: 1 MGIVSVSSSASWTPLGFSTKFSTCRSTAKRPLIVAFKADKSNETALVAPHEQIPLPIETT 60
Query: 395 KENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 571
KE KR K KK S+R+ AV T E P TL +DY+EAAAKLENIYK SP T SD EDV
Sbjct: 61 KEK-KRRGKSKKSSDRLKAVRT-EVSPCTLGVDYNEAAAKLENIYKLSPGTDTSDVEDVN 118
Query: 572 XXXXXXXXXXXXXNGEVEETEKKTAENFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSE 748
+ +E + +T++ VR+Q +K KR+ L+KRIAL++K + + V S
Sbjct: 119 GVIRRCRQRKRKTSECEKEDDGRTSKIIVRNQAKKAKRLSLQKRIALRIKSDEKLVTSVG 178
Query: 749 KKKQSKNDEDE 781
K+K KN+ ++
Sbjct: 179 KRKGRKNENEK 189
>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 520
Score = 154 bits (388), Expect = 4e-35
Identities = 91/194 (46%), Positives = 129/194 (66%), Gaps = 5/194 (2%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRC-STRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEV 391
MGVVTVSSS +RTP+GL+T S++ S L++P+I++F++DKS AL+AP+E V LP+E
Sbjct: 1 MGVVTVSSSVSRTPLGLSTNLVSSQRSTLRKPLIVAFRTDKSDKKALVAPQEKVPLPIET 60
Query: 392 NKENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDV 568
K+ KRL K +K + V A +EAP LELDY+EAAAKLEN+YKRSP T SD E+V
Sbjct: 61 GKKVQKRLGKARKLPKSVKAALIEEAPTCDLELDYNEAAAKLENLYKRSPETEASDVENV 120
Query: 569 XXXXXXXXXXXXXXNGEVEE-TEKKTAENF-VRS-QRKGKRMGLEKRIALKMKKEGEFVA 739
EV++ EK+T+++ VRS +K KR+ L+KR+ALK K+ + A
Sbjct: 121 DGLMIKRGRKRRKKISEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVAA 180
Query: 740 SSEKKKQSKNDEDE 781
S +K++ K E+E
Sbjct: 181 SVVRKRKDKRSENE 194
>gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao]
gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
[Theobroma cacao]
Length = 516
Score = 153 bits (386), Expect = 7e-35
Identities = 89/191 (46%), Positives = 123/191 (64%), Gaps = 2/191 (1%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEVN 394
MGVV+VSSSAARTP+GL+T+ ST+ +RP+ ++FK+DKS NTAL+ P+E + LP+E
Sbjct: 1 MGVVSVSSSAARTPLGLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETA 60
Query: 395 KENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 571
KE+ KR K KK + V+ V TD+ P TLE+DY+EAAAKLENIYK SPAT SD E+V
Sbjct: 61 KEHPKRRGKAKKDPKIVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVE 120
Query: 572 XXXXXXXXXXXXXNGEVEETEKKTAENFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSE 748
E+ + VR+Q + KR+ L+ RIALK +E + V S
Sbjct: 121 GKIKGRRQRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPVVSVR 180
Query: 749 KKKQSKNDEDE 781
+KK S+N+ ++
Sbjct: 181 RKKSSENESEK 191
>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 515
Score = 152 bits (385), Expect = 1e-34
Identities = 92/196 (46%), Positives = 120/196 (61%), Gaps = 7/196 (3%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEVN 394
MGVVTVSS+AARTP L + S S LKRP I++FK+DK NT L++P E VTLPVE N
Sbjct: 1 MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60
Query: 395 KENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 574
KR K +RV AV DEA P +L+LDY+EAAAKLENI+K SP T SD++
Sbjct: 61 NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKE--- 117
Query: 575 XXXXXXXXXXXXNGEVEETEKKTAENFVRSQRKG-KRMGLEKRIALKMK------KEGEF 733
+++ + + VR+Q K KR+ L+KRIALK K KEG+
Sbjct: 118 ---CKDGRSKRGQKRSKKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGKA 174
Query: 734 VASSEKKKQSKNDEDE 781
V S K+K++KN++DE
Sbjct: 175 VPSLRKQKETKNEDDE 190
>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X1 [Glycine
max] gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X2 [Glycine
max]
Length = 512
Score = 151 bits (381), Expect = 3e-34
Identities = 86/187 (45%), Positives = 121/187 (64%), Gaps = 2/187 (1%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEVN 394
MGV+TVS+SAARTP+ LNTR + V KRP+IL+FK +KS T L++P+E + LP+E
Sbjct: 1 MGVITVSTSAARTPLRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETA 60
Query: 395 KENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPAT-TVSDEDVX 571
K++ KR+ K + +RV AVST E P TL++DY+EAAAKLENIYK SP + T + ED+
Sbjct: 61 KKHQKRVGKTSESLKRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDID 120
Query: 572 XXXXXXXXXXXXXNGEVEETEKKTAENFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSE 748
+ EE + +N VR+Q +K KR+ L+KRIALK + E + ++
Sbjct: 121 SKIERVLRRRKKVS---EERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQ 177
Query: 749 KKKQSKN 769
KK+ KN
Sbjct: 178 KKRNVKN 184
>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 517
Score = 150 bits (379), Expect = 5e-34
Identities = 92/195 (47%), Positives = 126/195 (64%), Gaps = 6/195 (3%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRCST-RVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEV 391
MGVVTVSSSA+RTP+GL+ + S+ R SVLK+P+I++FK DKS T L+AP++ + LPVE
Sbjct: 1 MGVVTVSSSASRTPLGLSLKFSSNRSSVLKKPLIVAFKGDKSNKTVLVAPQDQIILPVET 60
Query: 392 NKENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVX 571
KE R+ K KK S RV AV+TDEA ST+E+DY+EAAAKLENI+K S A ED
Sbjct: 61 RKEVKSRVGKAKKSSNRVKAVATDEASTSTMEVDYNEAAAKLENIFKLSSADV---EDAV 117
Query: 572 XXXXXXXXXXXXXNGEVEETEKK---TAENFVRS-QRKGKRMGLEKRIALKM-KKEGEFV 736
GE +E K T++ VR+ ++K KR+ L KR+ LK K+E V
Sbjct: 118 GLTSRGRRRRSKVIGESDERAGKKSTTSDTVVRNRKKKAKRLSLHKRVELKRDKEENVAV 177
Query: 737 ASSEKKKQSKNDEDE 781
K+++S N+E++
Sbjct: 178 VLVRKRRESLNEEEK 192
>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
gi|567858878|ref|XP_006422122.1| hypothetical protein
CICLE_v10004760mg [Citrus clementina]
gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X1 [Citrus
sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED:
RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X2 [Citrus
sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED:
RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like isoform X3 [Citrus
sinensis] gi|557523994|gb|ESR35361.1| hypothetical
protein CICLE_v10004760mg [Citrus clementina]
gi|557523995|gb|ESR35362.1| hypothetical protein
CICLE_v10004760mg [Citrus clementina]
Length = 513
Score = 146 bits (369), Expect = 7e-33
Identities = 86/191 (45%), Positives = 123/191 (64%), Gaps = 2/191 (1%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEVN 394
MGVVT+SSS AR+P+GL+T + S KRP+I++FK+DKS N AL +P+E + LP+E
Sbjct: 1 MGVVTISSSPARSPIGLST--ISHRSTSKRPLIVAFKADKSNNQALFSPQEQIPLPIETP 58
Query: 395 KENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 574
K + KR +KR ERV V +DEA P TL++DY+EAAAKLENIYK SPA T S+
Sbjct: 59 KRHQKRRENSRKRLERVKGVFSDEASPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYAD 118
Query: 575 XXXXXXXXXXXXNGEVE-ETEKKTAENFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSE 748
GEVE +++ + + VR+Q ++ KR+ L+KRI L+ K E E V +
Sbjct: 119 GVVKRGRQRRKRIGEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELR-KNEDEKVVTKT 177
Query: 749 KKKQSKNDEDE 781
+K SK++ ++
Sbjct: 178 RKTDSKDEHEK 188
>ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
gi|355491246|gb|AES72449.1| RNA polymerase sigma factor
rpoD [Medicago truncatula]
Length = 514
Score = 145 bits (365), Expect = 2e-32
Identities = 83/186 (44%), Positives = 116/186 (62%), Gaps = 1/186 (0%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEVN 394
MGVVTVSSSAARTP+GLN + ST VLKRP+ ++FK DK +TAL+A +E + V+
Sbjct: 1 MGVVTVSSSAARTPLGLNAKFSTHHPVLKRPLTVAFKGDKQNDTALVATQEKIPTQVKPA 60
Query: 395 KENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 574
K + KR+ K K ++ AV T+E PS+L++DY+EAAA LENIYK SP T + D D
Sbjct: 61 KTHKKRIAKTNKLPKKPRAVCTEETFPSSLDVDYNEAAAILENIYKLSPTTDICDADYIE 120
Query: 575 XXXXXXXXXXXXNGEVEETEKKTAENFVRSQR-KGKRMGLEKRIALKMKKEGEFVASSEK 751
G+V + E ++ VR+Q+ K KRM L++RIALK + E V + K
Sbjct: 121 RKIKRVSRRGKKIGDVSK-EDSNSDRVVRNQKTKAKRMNLDERIALKTSENSEDVIPTRK 179
Query: 752 KKQSKN 769
K+ ++
Sbjct: 180 KRNPRS 185
>gb|AFK49090.1| unknown [Medicago truncatula]
Length = 210
Score = 143 bits (361), Expect = 6e-32
Identities = 82/186 (44%), Positives = 115/186 (61%), Gaps = 1/186 (0%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEVN 394
MGVVTVSSSAARTP+GLN + ST VLKRP+ ++FK DK +TAL+A +E + V+
Sbjct: 1 MGVVTVSSSAARTPLGLNAKFSTHHPVLKRPLTVAFKGDKQNDTALVATQEKIPTQVKPA 60
Query: 395 KENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 574
K + KR+ K K ++ AV T+E PS+L++DY+EAAA LENIYK SP T + D D
Sbjct: 61 KTHKKRIAKTNKLPKKPRAVCTEETFPSSLDVDYNEAAAILENIYKLSPTTDICDADYIE 120
Query: 575 XXXXXXXXXXXXNGEVEETEKKTAENFVRSQR-KGKRMGLEKRIALKMKKEGEFVASSEK 751
G+V + E ++ R+Q+ K KRM L++RIALK + E V + K
Sbjct: 121 RKIKRVSRRGKKIGDVSK-EDSNSDRVARNQKTKAKRMNLDERIALKTSENSEDVIPTRK 179
Query: 752 KKQSKN 769
K+ ++
Sbjct: 180 KRNPRS 185
>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 501
Score = 140 bits (354), Expect = 4e-31
Identities = 84/190 (44%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEVN 394
MGVVT SSSAARTP+GL+ + ST S +KR ++++FK DK+ + L+ PRE LP+E +
Sbjct: 1 MGVVTASSSAARTPLGLSLKFSTYRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIETS 60
Query: 395 KENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 574
K GK+ R R E TLE+DY+EAAAKLENIYK SPAT SD D+
Sbjct: 61 K--GKKRRGKTNR----------EVSSGTLEVDYNEAAAKLENIYKLSPATDTSDVDING 108
Query: 575 XXXXXXXXXXXXNGEVEETEKKTAENFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSEK 751
E+ E +T+ VR++ +K KR+ L+KRIALK +E E V K
Sbjct: 109 LIRKGRQRKRKTGEGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIRK 168
Query: 752 KKQSKNDEDE 781
KK SK+D ++
Sbjct: 169 KKDSKDDNEK 178
>ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glycine max]
gi|382365028|dbj|BAM05477.1| sigma-like factor 5A
[Glycine max]
Length = 512
Score = 135 bits (341), Expect = 1e-29
Identities = 79/187 (42%), Positives = 116/187 (62%), Gaps = 2/187 (1%)
Frame = +2
Query: 215 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVTLPVEVN 394
MGVVTVS+ AARTP+ LNTR ++ V KRP+I++FK +K AL++P+E + LP+E
Sbjct: 1 MGVVTVSTLAARTPLRLNTRLTSHQQVHKRPLIVAFKGNKLNKAALVSPQEQIPLPIETA 60
Query: 395 KENGKRLRKVKKRSERVSAVSTDEAPPSTLELDYSEAAAKLENIYKRSPAT-TVSDEDVX 571
K++ KR+ K + +RV AVS E P TL++DY+EAAAKLENIYK SP + T + ED+
Sbjct: 61 KKDQKRVGKTSESLKRVRAVSIVETSPCTLDMDYNEAAAKLENIYKLSPVSDTCNMEDID 120
Query: 572 XXXXXXXXXXXXXNGEVEETEKKTAENFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSE 748
E ++ + + VR+Q +K KR+ L+KRI LK + E + ++
Sbjct: 121 SKVERVLWRRRKVGNEHDD---ENCDIVVRNQNKKAKRLSLDKRITLKNNAKEEVIDQTQ 177
Query: 749 KKKQSKN 769
K + KN
Sbjct: 178 KIRNVKN 184