BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00009356
         (646 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   176   4e-42
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   171   2e-40
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   166   4e-39
ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,...   155   1e-35
ref|XP_002333134.1| predicted protein [Populus trichocarpa]           152   8e-35
gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe...   152   1e-34
gb|EMJ20208.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe...   152   1e-34
gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao] gi|508...   151   2e-34
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,...   150   2e-34
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro...   150   3e-34
ref|XP_002331841.1| predicted protein [Populus trichocarpa]           147   3e-33
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,...   146   6e-33
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,...   145   8e-33
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]     141   1e-31
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   140   4e-31
ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago t...   137   4e-30
gb|AFK49090.1| unknown [Medicago truncatula]                          136   5e-30
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr...   136   6e-30
gb|ESW09563.1| hypothetical protein PHAVU_009G1376001g, partial ...   133   5e-29
ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glyci...   132   1e-28

>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  176 bits (447), Expect = 4e-42
 Identities = 104/191 (54%), Positives = 134/191 (70%), Gaps = 2/191 (1%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 258
           MGVVTVSSSA+R+P+GL++R STR+  LKRPVI+SFK DK+KNT LIAP+ES++L +E +
Sbjct: 1   MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETS 60

Query: 259 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDV-X 435
           KEN KR R+V KRSERV+AV+  EA PSTLELDYSEAAAKLE+IYKRS  T  S+ +V  
Sbjct: 61  KENEKRSRRVSKRSERVHAVAI-EASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQD 119

Query: 436 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRK-GKRMGLEKRIALKMKKEGEFVASSQ 612
                                     N V+++RK  KR+ L++RIAL   KEGE VASS+
Sbjct: 120 HLVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSE 179

Query: 613 KKKHSKNDEDE 645
           ++K  ++ EDE
Sbjct: 180 RRKLKEDTEDE 190


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform 1 [Solanum
           lycopersicum]
          Length = 516

 Score =  171 bits (432), Expect = 2e-40
 Identities = 101/195 (51%), Positives = 134/195 (68%), Gaps = 6/195 (3%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 258
           MGVVTVSSSA+R+P+GL++R S R+  LKRPVI+SFK D +KNT L++P+ES++ P+E +
Sbjct: 1   MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60

Query: 259 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKR-----SPATTVSD 423
           KEN KR R+V KR+ERV+AV T EAPPSTLELDYSEAAAKLE+IYKR     SP T V D
Sbjct: 61  KENEKRSRRVSKRTERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119

Query: 424 EDVXXXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQR-KGKRMGLEKRIALKMKKEGEFV 600
             V                           N V+++R K KR+ L++RIAL   KEG+ +
Sbjct: 120 HLVKRRPRTRKRIVESDE----EAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKML 175

Query: 601 ASSQKKKHSKNDEDE 645
           ASS+++K +++ EDE
Sbjct: 176 ASSERRKLNEDTEDE 190


>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
           gi|302143685|emb|CBI22546.3| unnamed protein product
           [Vitis vinifera]
          Length = 518

 Score =  166 bits (421), Expect = 4e-39
 Identities = 96/192 (50%), Positives = 126/192 (65%), Gaps = 4/192 (2%)
 Frame = +1

Query: 79  MGVVTVSSSAA--RTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVE 252
           MGVVTVSSSA+  RTP GLN + S   + L+RP++L+FK+DK+KN AL+ P E + LP+E
Sbjct: 1   MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60

Query: 253 VNKENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-ED 429
            +K++ KRLR+  K S+RV AVSTDE  P ++ELDY+EAAAKLENIYK SPAT VS+ ED
Sbjct: 61  TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAED 120

Query: 430 VXXXXXXXXXXXXXXNGXXXXXXXXXXXNFVR-SQRKGKRMGLEKRIALKMKKEGEFVAS 606
           +                           N VR   +K KR+ LEKRIAL   K+ + VAS
Sbjct: 121 LERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVAS 180

Query: 607 SQKKKHSKNDED 642
            QKK+ SKN+++
Sbjct: 181 IQKKRDSKNEDE 192


>ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform 2 [Solanum
           lycopersicum]
          Length = 487

 Score =  155 bits (392), Expect = 1e-35
 Identities = 94/177 (53%), Positives = 119/177 (67%), Gaps = 6/177 (3%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 258
           MGVVTVSSSA+R+P+GL++R S R+  LKRPVI+SFK D +KNT L++P+ES++ P+E +
Sbjct: 1   MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60

Query: 259 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKR-----SPATTVSD 423
           KEN KR R+V KR+ERV+AV T EAPPSTLELDYSEAAAKLE+IYKR     SP T V D
Sbjct: 61  KENEKRSRRVSKRTERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119

Query: 424 EDVXXXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQR-KGKRMGLEKRIALKMKKEG 591
             V                           N V+++R K KR+ L++RIAL   KEG
Sbjct: 120 HLVKRRPRTRKRIVESDE----EAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEG 172


>ref|XP_002333134.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  152 bits (384), Expect = 8e-35
 Identities = 92/191 (48%), Positives = 122/191 (63%), Gaps = 2/191 (1%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 258
           MGVV+VSSSA+RTP+GL+T+ ST  S  KRP+I++FK+DKS NT+L+AP E + LPVE  
Sbjct: 1   MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETT 60

Query: 259 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 435
           K   KRL K KK S R+ AV T E  P TL +DY+EAAAKLENIYK SP T  SD ED  
Sbjct: 61  K-GKKRLGKSKKSSNRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDAS 118

Query: 436 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSQ 612
                        +              VR++ +K KR+ LEKRI+L++K E + V+S+ 
Sbjct: 119 GVIRRGRQRKRKISEGGKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAG 178

Query: 613 KKKHSKNDEDE 645
           K+K  KN+ ++
Sbjct: 179 KRKDRKNENEK 189


>gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  152 bits (383), Expect = 1e-34
 Identities = 83/193 (43%), Positives = 124/193 (64%), Gaps = 4/193 (2%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 258
           MGVVTVSSSA+RTP+GL+T+ + + S L++P+I++FK+D++  TAL+AP+E + LP+E  
Sbjct: 1   MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60

Query: 259 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD--EDV 432
           K++ KRL K +K ++ V + +TD A P TLE+DY+EAAAKLEN+YKRSP T  +   EDV
Sbjct: 61  KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 120

Query: 433 XXXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQR--KGKRMGLEKRIALKMKKEGEFVAS 606
                         +            N V   R  K KR+ L KR+ALK  K+ + ++S
Sbjct: 121 DGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISS 180

Query: 607 SQKKKHSKNDEDE 645
             +K+ S+ +E+E
Sbjct: 181 IVRKRKSRKNENE 193


>gb|EMJ20208.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
          Length = 390

 Score =  152 bits (383), Expect = 1e-34
 Identities = 83/193 (43%), Positives = 124/193 (64%), Gaps = 4/193 (2%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 258
           MGVVTVSSSA+RTP+GL+T+ + + S L++P+I++FK+D++  TAL+AP+E + LP+E  
Sbjct: 1   MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60

Query: 259 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD--EDV 432
           K++ KRL K +K ++ V + +TD A P TLE+DY+EAAAKLEN+YKRSP T  +   EDV
Sbjct: 61  KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 120

Query: 433 XXXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQR--KGKRMGLEKRIALKMKKEGEFVAS 606
                         +            N V   R  K KR+ L KR+ALK  K+ + ++S
Sbjct: 121 DGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISS 180

Query: 607 SQKKKHSKNDEDE 645
             +K+ S+ +E+E
Sbjct: 181 IVRKRKSRKNENE 193


>gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao]
           gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
           [Theobroma cacao]
          Length = 516

 Score =  151 bits (381), Expect = 2e-34
 Identities = 89/191 (46%), Positives = 121/191 (63%), Gaps = 2/191 (1%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 258
           MGVV+VSSSAARTP+GL+T+ ST+    +RP+ ++FK+DKS NTAL+ P+E + LP+E  
Sbjct: 1   MGVVSVSSSAARTPLGLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETA 60

Query: 259 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 435
           KE+ KR  K KK  + VN V TD+  P TLE+DY+EAAAKLENIYK SPAT  SD E+V 
Sbjct: 61  KEHPKRRGKAKKDPKIVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVE 120

Query: 436 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSQ 612
                                       VR+Q  + KR+ L+ RIALK  +E + V S +
Sbjct: 121 GKIKGRRQRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPVVSVR 180

Query: 613 KKKHSKNDEDE 645
           +KK S+N+ ++
Sbjct: 181 RKKSSENESEK 191


>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  150 bits (380), Expect = 2e-34
 Identities = 91/190 (47%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 258
           MGVVTVSS+AARTP  L  + S   S LKRP I++FK+DK  NT L++P E V LPVE N
Sbjct: 1   MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 259 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 438
               KR     K  +RV AV  DEA P +L+LDY+EAAAKLENI+K SP T  SD++   
Sbjct: 61  NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120

Query: 439 XXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRKG-KRMGLEKRIALKMKKEGEFVASSQK 615
                       +              VR+Q K  KR+ L+KRIALK KKEG+ VA  +K
Sbjct: 121 GRSKRGQKRSKKSA------NRPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRK 174

Query: 616 KKHSKNDEDE 645
           +K +KN+ DE
Sbjct: 175 QKDTKNEADE 184


>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
           trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
           sigma subunit SigE family protein [Populus trichocarpa]
          Length = 512

 Score =  150 bits (379), Expect = 3e-34
 Identities = 91/191 (47%), Positives = 122/191 (63%), Gaps = 2/191 (1%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 258
           MGVV+VSSSA+RTP+GL+T+ ST  S  KRP+I++FK++KS NT+L+AP E + LPVE  
Sbjct: 1   MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETT 60

Query: 259 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 435
           K   KRL K KK S R+ AV T E  P TL +DY+EAAAKLENIYK SP T  SD ED  
Sbjct: 61  K-GKKRLGKSKKSSNRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDAS 118

Query: 436 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSQ 612
                        +              VR++ +K KR+ LEKRI+L++K E + V+S+ 
Sbjct: 119 GVIRRGRQRKRKISEGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAG 178

Query: 613 KKKHSKNDEDE 645
           K+K  KN+ ++
Sbjct: 179 KRKDRKNENEK 189


>ref|XP_002331841.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  147 bits (370), Expect = 3e-33
 Identities = 89/191 (46%), Positives = 119/191 (62%), Gaps = 2/191 (1%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 258
           MG+V+VSSSA+ TP+G +T+ ST  S  KRP+I++FK+DKS  TAL+AP E + LP+E  
Sbjct: 1   MGIVSVSSSASWTPLGFSTKFSTCRSTAKRPLIVAFKADKSNETALVAPHEQIPLPIETT 60

Query: 259 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 435
           KE  KR  K KK S+R+ AV T E  P TL +DY+EAAAKLENIYK SP T  SD EDV 
Sbjct: 61  KEK-KRRGKSKKSSDRLKAVRT-EVSPCTLGVDYNEAAAKLENIYKLSPGTDTSDVEDVN 118

Query: 436 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSQ 612
                        +              VR+Q +K KR+ L+KRIAL++K + + V S  
Sbjct: 119 GVIRRCRQRKRKTSECEKEDDGRTSKIIVRNQAKKAKRLSLQKRIALRIKSDEKLVTSVG 178

Query: 613 KKKHSKNDEDE 645
           K+K  KN+ ++
Sbjct: 179 KRKGRKNENEK 189


>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 515

 Score =  146 bits (368), Expect = 6e-33
 Identities = 91/196 (46%), Positives = 115/196 (58%), Gaps = 7/196 (3%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 258
           MGVVTVSS+AARTP  L  + S   S LKRP I++FK+DK  NT L++P E V LPVE N
Sbjct: 1   MGVVTVSSAAARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN 60

Query: 259 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 438
               KR     K  +RV AV  DEA P +L+LDY+EAAAKLENI+K SP T  SD++   
Sbjct: 61  NRRKKRSGNTSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKECKD 120

Query: 439 XXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRKG-KRMGLEKRIALKMK------KEGEF 597
                       +              VR+Q K  KR+ L+KRIALK K      KEG+ 
Sbjct: 121 GRSKRGQKRSKKSA------NRPGDGIVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGKA 174

Query: 598 VASSQKKKHSKNDEDE 645
           V S +K+K +KN++DE
Sbjct: 175 VPSLRKQKETKNEDDE 190


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform X1 [Glycine
           max] gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
           polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform X2 [Glycine
           max]
          Length = 512

 Score =  145 bits (367), Expect = 8e-33
 Identities = 85/187 (45%), Positives = 118/187 (63%), Gaps = 2/187 (1%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 258
           MGV+TVS+SAARTP+ LNTR  +   V KRP+IL+FK +KS  T L++P+E + LP+E  
Sbjct: 1   MGVITVSTSAARTPLRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETA 60

Query: 259 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPAT-TVSDEDVX 435
           K++ KR+ K  +  +RV AVST E  P TL++DY+EAAAKLENIYK SP + T + ED+ 
Sbjct: 61  KKHQKRVGKTSESLKRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNVEDID 120

Query: 436 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSQ 612
                        +            N VR+Q +K KR+ L+KRIALK   + E +  +Q
Sbjct: 121 SKIERVLRRRKKVS---EERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQ 177

Query: 613 KKKHSKN 633
           KK++ KN
Sbjct: 178 KKRNVKN 184


>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 517

 Score =  141 bits (356), Expect = 1e-31
 Identities = 85/192 (44%), Positives = 118/192 (61%), Gaps = 3/192 (1%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRCST-RVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEV 255
           MGVVTVSSSA+RTP+GL+ + S+ R SVLK+P+I++FK DKS  T L+AP++ + LPVE 
Sbjct: 1   MGVVTVSSSASRTPLGLSLKFSSNRSSVLKKPLIVAFKGDKSNKTVLVAPQDQIILPVET 60

Query: 256 NKENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVX 435
            KE   R+ K KK S RV AV+TDEA  ST+E+DY+EAAAKLENI+K S A       + 
Sbjct: 61  RKEVKSRVGKAKKSSNRVKAVATDEASTSTMEVDYNEAAAKLENIFKLSSADVEDAVGLT 120

Query: 436 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRS-QRKGKRMGLEKRIALKM-KKEGEFVASS 609
                        +              VR+ ++K KR+ L KR+ LK  K+E   V   
Sbjct: 121 SRGRRRRSKVIGESDERAGKKSTTSDTVVRNRKKKAKRLSLHKRVELKRDKEENVAVVLV 180

Query: 610 QKKKHSKNDEDE 645
           +K++ S N+E++
Sbjct: 181 RKRRESLNEEEK 192


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Fragaria vesca subsp.
           vesca]
          Length = 520

 Score =  140 bits (352), Expect = 4e-31
 Identities = 86/194 (44%), Positives = 118/194 (60%), Gaps = 5/194 (2%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRC-STRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEV 255
           MGVVTVSSS +RTP+GL+T   S++ S L++P+I++F++DKS   AL+AP+E V LP+E 
Sbjct: 1   MGVVTVSSSVSRTPLGLSTNLVSSQRSTLRKPLIVAFRTDKSDKKALVAPQEKVPLPIET 60

Query: 256 NKENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDV 432
            K+  KRL K +K  + V A   +EAP   LELDY+EAAAKLEN+YKRSP T  SD E+V
Sbjct: 61  GKKVQKRLGKARKLPKSVKAALIEEAPTCDLELDYNEAAAKLENLYKRSPETEASDVENV 120

Query: 433 XXXXXXXXXXXXXXNGXXXXXXXXXXXN--FVRS-QRKGKRMGLEKRIALKMKKEGEFVA 603
                                      +   VRS  +K KR+ L+KR+ALK  K+ +  A
Sbjct: 121 DGLMIKRGRKRRKKISEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVAA 180

Query: 604 SSQKKKHSKNDEDE 645
           S  +K+  K  E+E
Sbjct: 181 SVVRKRKDKRSENE 194


>ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
           gi|355491246|gb|AES72449.1| RNA polymerase sigma factor
           rpoD [Medicago truncatula]
          Length = 514

 Score =  137 bits (344), Expect = 4e-30
 Identities = 78/185 (42%), Positives = 108/185 (58%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 258
           MGVVTVSSSAARTP+GLN + ST   VLKRP+ ++FK DK  +TAL+A +E +   V+  
Sbjct: 1   MGVVTVSSSAARTPLGLNAKFSTHHPVLKRPLTVAFKGDKQNDTALVATQEKIPTQVKPA 60

Query: 259 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 438
           K + KR+ K  K  ++  AV T+E  PS+L++DY+EAAA LENIYK SP T + D D   
Sbjct: 61  KTHKKRIAKTNKLPKKPRAVCTEETFPSSLDVDYNEAAAILENIYKLSPTTDICDADYIE 120

Query: 439 XXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRKGKRMGLEKRIALKMKKEGEFVASSQKK 618
                        G                + K KRM L++RIALK  +  E V  ++KK
Sbjct: 121 RKIKRVSRRGKKIGDVSKEDSNSDRVVRNQKTKAKRMNLDERIALKTSENSEDVIPTRKK 180

Query: 619 KHSKN 633
           ++ ++
Sbjct: 181 RNPRS 185


>gb|AFK49090.1| unknown [Medicago truncatula]
          Length = 210

 Score =  136 bits (343), Expect = 5e-30
 Identities = 78/185 (42%), Positives = 108/185 (58%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 258
           MGVVTVSSSAARTP+GLN + ST   VLKRP+ ++FK DK  +TAL+A +E +   V+  
Sbjct: 1   MGVVTVSSSAARTPLGLNAKFSTHHPVLKRPLTVAFKGDKQNDTALVATQEKIPTQVKPA 60

Query: 259 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 438
           K + KR+ K  K  ++  AV T+E  PS+L++DY+EAAA LENIYK SP T + D D   
Sbjct: 61  KTHKKRIAKTNKLPKKPRAVCTEETFPSSLDVDYNEAAAILENIYKLSPTTDICDADYIE 120

Query: 439 XXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRKGKRMGLEKRIALKMKKEGEFVASSQKK 618
                        G                + K KRM L++RIALK  +  E V  ++KK
Sbjct: 121 RKIKRVSRRGKKIGDVSKEDSNSDRVARNQKTKAKRMNLDERIALKTSENSEDVIPTRKK 180

Query: 619 KHSKN 633
           ++ ++
Sbjct: 181 RNPRS 185


>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
           gi|567858878|ref|XP_006422122.1| hypothetical protein
           CICLE_v10004760mg [Citrus clementina]
           gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
           polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform X1 [Citrus
           sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED:
           RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform X2 [Citrus
           sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED:
           RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform X3 [Citrus
           sinensis] gi|557523994|gb|ESR35361.1| hypothetical
           protein CICLE_v10004760mg [Citrus clementina]
           gi|557523995|gb|ESR35362.1| hypothetical protein
           CICLE_v10004760mg [Citrus clementina]
          Length = 513

 Score =  136 bits (342), Expect = 6e-30
 Identities = 83/191 (43%), Positives = 115/191 (60%), Gaps = 2/191 (1%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 258
           MGVVT+SSS AR+P+GL+T   +  S  KRP+I++FK+DKS N AL +P+E + LP+E  
Sbjct: 1   MGVVTISSSPARSPIGLST--ISHRSTSKRPLIVAFKADKSNNQALFSPQEQIPLPIETP 58

Query: 259 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 438
           K + KR    +KR ERV  V +DEA P TL++DY+EAAAKLENIYK SPA T S+     
Sbjct: 59  KRHQKRRENSRKRLERVKGVFSDEASPCTLDVDYNEAAAKLENIYKLSPAVTTSEVKYAD 118

Query: 439 XXXXXXXXXXXXNGXXXXXXXXXXXN-FVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSQ 612
                        G              VR+Q ++ KR+ L+KRI L+ K E E V +  
Sbjct: 119 GVVKRGRQRRKRIGEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELR-KNEDEKVVTKT 177

Query: 613 KKKHSKNDEDE 645
           +K  SK++ ++
Sbjct: 178 RKTDSKDEHEK 188


>gb|ESW09563.1| hypothetical protein PHAVU_009G1376001g, partial [Phaseolus
           vulgaris]
          Length = 398

 Score =  133 bits (334), Expect = 5e-29
 Identities = 76/190 (40%), Positives = 116/190 (61%), Gaps = 1/190 (0%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 258
           MGVVTVSSSAARTP+GLNT+ S   + LKRP+I++FK DK  ++AL+A +E + +PVE +
Sbjct: 1   MGVVTVSSSAARTPLGLNTKFSC--NRLKRPLIIAFKGDKHDDSALVATQEKIPVPVETS 58

Query: 259 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 438
           K   K++ K KK  +R      +E   ++L++DY+EAAA LENIYK SPA+  ++ +   
Sbjct: 59  KTQKKKMGKAKKLPKRERVAFVEENSQTSLDVDYNEAAAMLENIYKLSPASDTANAECMD 118

Query: 439 XXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSQK 615
                                      VR+Q +K KR+GL++RI+LK   +G+ V  +QK
Sbjct: 119 GKIKRVSRRRKKIVDDCEEKDVNDDRVVRNQNKKAKRLGLDQRISLKSNTDGDEVVPTQK 178

Query: 616 KKHSKNDEDE 645
           K+++ N  ++
Sbjct: 179 KRNANNSVEK 188


>ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glycine max]
           gi|382365028|dbj|BAM05477.1| sigma-like factor 5A
           [Glycine max]
          Length = 512

 Score =  132 bits (331), Expect = 1e-28
 Identities = 79/187 (42%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
 Frame = +1

Query: 79  MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 258
           MGVVTVS+ AARTP+ LNTR ++   V KRP+I++FK +K    AL++P+E + LP+E  
Sbjct: 1   MGVVTVSTLAARTPLRLNTRLTSHQQVHKRPLIVAFKGNKLNKAALVSPQEQIPLPIETA 60

Query: 259 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPAT-TVSDEDVX 435
           K++ KR+ K  +  +RV AVS  E  P TL++DY+EAAAKLENIYK SP + T + ED+ 
Sbjct: 61  KKDQKRVGKTSESLKRVRAVSIVETSPCTLDMDYNEAAAKLENIYKLSPVSDTCNMEDID 120

Query: 436 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSQ 612
                                       VR+Q +K KR+ L+KRI LK   + E +  +Q
Sbjct: 121 SKVERVLWRRRKVGNEHDDENCDI---VVRNQNKKAKRLSLDKRITLKNNAKEEVIDQTQ 177

Query: 613 KKKHSKN 633
           K ++ KN
Sbjct: 178 KIRNVKN 184