BLASTX nr result
ID: Rehmannia22_contig00009096
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00009096
(314 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670... 80 2e-13
ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668... 77 3e-12
gb|EEC70571.1| hypothetical protein OsI_01753 [Oryza sativa Indi... 71 1e-10
gb|EAZ11749.1| hypothetical protein OsJ_01617 [Oryza sativa Japo... 71 1e-10
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 70 3e-10
ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arab... 68 1e-09
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 67 2e-09
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 67 2e-09
gb|AAF81336.1|AC007767_16 Strong similarity to a putative non-LT... 66 4e-09
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 66 5e-09
ref|XP_006378155.1| hypothetical protein POPTR_0010s04250g, part... 65 7e-09
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub... 64 2e-08
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 64 2e-08
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 64 2e-08
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 62 8e-08
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 62 8e-08
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 62 8e-08
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 62 8e-08
ref|NP_063979.1| orf315 gene product (mitochondrion) [Beta vulga... 62 1e-07
ref|XP_002453810.1| hypothetical protein SORBIDRAFT_04g018371 [S... 62 1e-07
>ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max]
Length = 383
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/86 (41%), Positives = 48/86 (55%)
Frame = -3
Query: 258 SSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYIDTDPMCKLC 79
+ KMYD R P W + IW IP K SF WLA K+RL LD ++++ +C LC
Sbjct: 271 AGKMYDYIRGTRPVVHWSSIIWNPVIPSKMSFILWLATKNRLLALDRAAFLNKGFLCPLC 330
Query: 78 KNELESAPHLFFMCTVTNSLWCRIKN 1
NE ES HLFF C + +W I++
Sbjct: 331 TNEAESHAHLFFSCRTSLRVWAHIRD 356
>ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668530 [Glycine max]
Length = 477
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/103 (33%), Positives = 55/103 (53%)
Frame = -3
Query: 309 QSAIDALTPLVKDNGLNSSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLS 130
++A L + L + K YD R P W++ +W IP K SF WLA K+ L
Sbjct: 283 EAAKQTLNSWNSNEQLLAGKAYDYIRGVKPAVNWNSVVWNPAIPSKMSFILWLATKNHLL 342
Query: 129 TLDNLSYIDTDPMCKLCKNELESAPHLFFMCTVTNSLWCRIKN 1
TLD ++++ +C LC+ + +S HLFF C ++ +W I++
Sbjct: 343 TLDRAAFLNKGLLCPLCRTKAKSHAHLFFSCRISLQVWANIRD 385
>gb|EEC70571.1| hypothetical protein OsI_01753 [Oryza sativa Indica Group]
Length = 395
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/98 (37%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = -3
Query: 291 LTPLVKDNGLNSSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNL- 115
L+PL + L + +Y HN IWK PPKF F WL KDRL T NL
Sbjct: 204 LSPLSQQGDLTTRGIYHTLLPPSETDPVHNFIWKNASPPKFKFFAWLLSKDRLPTAKNLF 263
Query: 114 -SYIDTDPMCKLCKNELESAPHLFFMCTVTNSLWCRIK 4
I P C +C+ E++ HLFFMC + W I+
Sbjct: 264 TKIILQSPQCAICQTGEETSNHLFFMCPFATAFWTTIR 301
>gb|EAZ11749.1| hypothetical protein OsJ_01617 [Oryza sativa Japonica Group]
Length = 267
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = -3
Query: 291 LTPLVKDNGLNSSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNL- 115
L+PL + L + ++Y HN IWK PPKF F WL KDRLST NL
Sbjct: 76 LSPLSQQGDLTTREIYHTLLPPSETDLVHNFIWKNASPPKFKFFAWLLSKDRLSTAKNLF 135
Query: 114 -SYIDTDPMCKLCKNELESAPHLFFMCTVTNSLWCRIK 4
I P C + + E++ HLFFMC + W I+
Sbjct: 136 TKIILQSPQCAIRQTGEETSNHLFFMCPFATAFWTTIR 173
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/75 (44%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = -3
Query: 234 RNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYID--TDPMCKLCKNELES 61
RN WH IW PKFSFC WLA ++RLST D + + P C LC N +E+
Sbjct: 478 RNTSTPVTWHMGIWFAHATPKFSFCAWLAVQNRLSTGDKMLQWNRRLSPTCVLCNNNIET 537
Query: 60 APHLFFMCTVTNSLW 16
HLFF C T +W
Sbjct: 538 RNHLFFSCCYTAEIW 552
>ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arabidopsis lyrata subsp.
lyrata] gi|297311371|gb|EFH41795.1| hypothetical protein
ARALYDRAFT_917542 [Arabidopsis lyrata subsp. lyrata]
Length = 227
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/89 (33%), Positives = 45/89 (50%)
Frame = -3
Query: 273 DNGLNSSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYIDTDP 94
D+ S +++ R + WHN++W P++SF WLA KD+LST + +
Sbjct: 60 DSSFTSRHTWNLLRKAKHKVLWHNSVWFPQRVPRYSFIVWLAVKDQLSTGTRMRAWGVEQ 119
Query: 93 MCKLCKNELESAPHLFFMCTVTNSLWCRI 7
C C+ ES HLFF C T S+W +
Sbjct: 120 PCVFCRERDESRDHLFFACPFTYSIWSEL 148
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = -3
Query: 210 WHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYID--TDPMCKLCKNELESAPHLFFMC 37
WH +W PKFSFC WLA DRLST D + + C LC+N ES HLFF C
Sbjct: 1282 WHKGVWFTHSTPKFSFCVWLAVYDRLSTGDKMLLWNRGLQGTCLLCRNATESRDHLFFSC 1341
Query: 36 TVTNSLW 16
+ ++ +W
Sbjct: 1342 SFSSEVW 1348
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 67.0 bits (162), Expect = 2e-09
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = -3
Query: 234 RNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYID--TDPMCKLCKNELES 61
R + WH +W PKFSFC WLA ++RLST D + + T C C + +E+
Sbjct: 770 RTSSNQRAWHKGVWFAHATPKFSFCAWLAIRNRLSTGDRMMTWNNGTPTTCVFCSSPMET 829
Query: 60 APHLFFMCTVTNSLWCRI 7
HLFF C ++ +W I
Sbjct: 830 RDHLFFQCCYSSEIWTSI 847
>gb|AAF81336.1|AC007767_16 Strong similarity to a putative non-LTR retroelement reverse
transcriptase At2g23880 gi|3738337 from Arabidopsis
thaliana BAC F27L4 gb|AC005170 [Arabidopsis thaliana]
Length = 206
Score = 66.2 bits (160), Expect = 4e-09
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = -3
Query: 234 RNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYID--TDPMCKLCKNELES 61
R + WH +W PKFSFC WLA ++RLS +D + + T C C + +E+
Sbjct: 57 RTSSNQRAWHTGVWFAHATPKFSFCAWLAVRNRLSMVDRMMTWNNGTPTTCVFCSSPMET 116
Query: 60 APHLFFMCTVTNSLWCRI 7
HLFF C ++ +W I
Sbjct: 117 RDHLFFQCHYSSEIWTSI 134
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 65.9 bits (159), Expect = 5e-09
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = -3
Query: 258 SSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYID--TDPMCK 85
S +++ R +G WH AIW PKF+F +WLA DRL+T D ++ + +C
Sbjct: 1223 SPEIWHQIREQGLVKQWHKAIWFSGATPKFTFISWLAAHDRLTTGDKMASWNRGISSVCV 1282
Query: 84 LCKNELESAPHLFFMCTVTNSLWCRI 7
LC ES HLFF C ++ +W R+
Sbjct: 1283 LCNISAESRDHLFFSCNFSSHIWDRL 1308
>ref|XP_006378155.1| hypothetical protein POPTR_0010s04250g, partial [Populus
trichocarpa] gi|550329025|gb|ERP55952.1| hypothetical
protein POPTR_0010s04250g, partial [Populus trichocarpa]
Length = 112
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/84 (38%), Positives = 45/84 (53%)
Frame = -3
Query: 267 GLNSSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYIDTDPMC 88
G ++ Y F + W + +W+Q+ P+ +F WL K L T D L +I TDP+
Sbjct: 10 GSFTANAYHFFTYKVDHVQWASVVWEQWFLPRHNFSLWLLGK--LRTRDRLQFISTDPLY 67
Query: 87 KLCKNELESAPHLFFMCTVTNSLW 16
LC N ES HLFF C ++SLW
Sbjct: 68 PLCHNSSESHAHLFFSCAWSSSLW 91
>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
Length = 441
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = -3
Query: 234 RNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLS--YIDTDPMCKLCKNELES 61
R + PR+ W+ IW PK+SF TWLA K+RLST D + + C C+ + E+
Sbjct: 267 REQKPRNEWYQGIWFSHATPKYSFITWLATKNRLSTGDRMMSWNAGVNLSCVFCQEQTET 326
Query: 60 APHLFFMCTVTNSLW 16
HLFF C + +W
Sbjct: 327 RNHLFFTCRYSREVW 341
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 63.9 bits (154), Expect = 2e-08
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Frame = -3
Query: 234 RNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNL----SYIDTDPMCKLCKNEL 67
R+ R WH IW PK+SFC+WLA RL T D + + I TD C C+ L
Sbjct: 1048 RSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGIATD--CIFCQGTL 1105
Query: 66 ESAPHLFFMCTVTNSLW 16
E+ HLFF C+ T+ +W
Sbjct: 1106 ETRDHLFFTCSFTSVIW 1122
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 63.9 bits (154), Expect = 2e-08
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = -3
Query: 210 WHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSY--IDTDPMCKLCKNELESAPHLFFMC 37
WH +W PK SFC WLA ++LST + + + + C LC N LE+ HLFF C
Sbjct: 761 WHKGVWFAHETPKHSFCVWLAIWNKLSTGQRMQHWNLQSSVGCVLCNNNLETRDHLFFSC 820
Query: 36 TVTNSLW 16
T+ +W
Sbjct: 821 AYTSGIW 827
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Frame = -3
Query: 300 IDALTPLVKDNGLNSSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLD 121
ID + L+ +N K+Y ++ G R W N ++ P+ +F WLAC RLST D
Sbjct: 313 IDNMEELMIRGSINMGKLYRKLQDCGQRKEWKNLLYGNTARPRANFILWLACHGRLSTKD 372
Query: 120 NL---SYIDTDPMCKLCKNELESAPHLFFMCTVTNSLWCRI 7
L ID D C C E ES HLFF+C + +W +
Sbjct: 373 RLCKYGMID-DKSCCFCSEE-ESMNHLFFVCDNSKRVWMEV 411
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Frame = -3
Query: 210 WHNAIWKQFI-----PPKFSFCTWLACKDRLSTLDNLSYIDTD--PMCKLCKNELESAPH 52
+ N +WK+ I PK F WLA +RL+T + +S + D P+CK+C NE+E+ H
Sbjct: 955 YENVVWKRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVSPLCKMCGNEIETIQH 1014
Query: 51 LFFMCTVTNSLWCRI 7
LFF C + +W ++
Sbjct: 1015 LFFNCIYSKEIWGKV 1029
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 62.0 bits (149), Expect = 8e-08
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = -3
Query: 210 WHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYID--TDPMCKLCKNELESAPHLFFMC 37
W+ +W PK+ FCTWLA ++RLST + + +D C C +E+ HLFF C
Sbjct: 462 WYKGVWFSHSTPKYQFCTWLALRNRLSTGYRMQLWNNGSDVKCTFCSTSIETRDHLFFSC 521
Query: 36 TVTNSLWCRI 7
+ +++W I
Sbjct: 522 SYASAIWTAI 531
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = -3
Query: 234 RNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYIDTDPM--CKLCKNELES 61
R P+ W+ +W + PK+SF WL ++RLST D + ++ + C LC N E+
Sbjct: 1346 RTHQPQQNWYKGVWFPYSTPKYSFLLWLTVQNRLSTGDRIKAWNSGQLVTCTLCNNAEET 1405
Query: 60 APHLFFMCTVTNSLW 16
HLFF C T+ +W
Sbjct: 1406 RDHLFFSCQYTSYVW 1420
>ref|NP_063979.1| orf315 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435090|ref|YP_004222308.1| hypothetical protein
BevumaM_p073 [Beta vulgaris subsp. maritima]
gi|346683181|ref|YP_004842113.1| hypothetical protein
BemaM_p068 [Beta macrocarpa] gi|9049281|dbj|BAA99291.1|
orf315 [Beta vulgaris subsp. vulgaris]
gi|319439823|emb|CBJ17535.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500099|emb|CBX24917.1|
hypothetical protein [Beta macrocarpa]
Length = 315
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = -3
Query: 252 KMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSY--IDTDPMCKLC 79
K+Y++ R R W I PK F TWL ++RL T D ++ + DP+C LC
Sbjct: 9 KLYELIRPSAARVHWKRIICNNKASPKSLFITWLGIQNRLYTKDRMANWNLACDPVCVLC 68
Query: 78 KNELESAPHLFFMCTVTNSLW 16
ESA HLFF C + +W
Sbjct: 69 GQGAESAQHLFFACEYSQQVW 89
>ref|XP_002453810.1| hypothetical protein SORBIDRAFT_04g018371 [Sorghum bicolor]
gi|241933641|gb|EES06786.1| hypothetical protein
SORBIDRAFT_04g018371 [Sorghum bicolor]
Length = 498
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = -3
Query: 249 MYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYID--TDPMCKLCK 76
+Y I + G + +A+WK IPP+ F WL +R+ T DNL+ DP C C
Sbjct: 296 LYAIVNHRGVVPIFVHAVWKLNIPPRVQFFLWLLSNNRVLTRDNLAKRREVNDPTCLFC- 354
Query: 75 NELESAPHLFFMCTVTNSLW 16
NE ES HLFF C V ++W
Sbjct: 355 NEKESITHLFFQCCVARNVW 374