BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00007892
         (1535 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607...   332   3e-88
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                     319   2e-84
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]               315   4e-83
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             307   7e-81
ref|XP_004301972.1| PREDICTED: uncharacterized protein LOC101291...   306   2e-80
gb|AAD27571.1|AF114171_12 polyprotein [Sorghum bicolor] gi|43780...   301   4e-79
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             301   5e-79
gb|AFU25705.1| gag-pol precursor [Castanea mollissima]                298   4e-78
dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]                293   1e-76
gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subc...   292   3e-76
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...   291   4e-76
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga...   291   5e-76
emb|CAN77422.1| hypothetical protein VITISV_032393 [Vitis vinifera]   291   7e-76
gb|ABF97034.1| retrotransposon protein, putative, Ty3-gypsy subc...   290   9e-76
emb|CAD39384.2| OSJNBb0016B03.14 [Oryza sativa Japonica Group]        290   9e-76
gb|AAP44597.1| putative polyprotein [Oryza sativa Japonica Group]     290   9e-76
emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]                  289   2e-75
gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group...   289   2e-75
emb|CAN79562.1| hypothetical protein VITISV_020822 [Vitis vinifera]   288   6e-75
dbj|BAD18986.1| GAG-POL precursor [Vitis vinifera] gi|109659801|...   287   7e-75

>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
          Length = 1866

 Score =  332 bits (850), Expect = 3e-88
 Identities = 171/388 (44%), Positives = 248/388 (63%), Gaps = 14/388 (3%)
 Frame = +3

Query: 3    KVRAIREMAPPRDAKDVQCLTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKA 182
            K+RA+ EM  PR  K+VQ LTG+LAALNRFISR  ++  PFF++++K KK  W  EC++A
Sbjct: 1074 KIRAVIEMRSPRTVKEVQSLTGKLAALNRFISRATDKCHPFFQIIKKGKKMEWTPECEEA 1133

Query: 183  FEDLKNYLADLSLLTKPLPGEPLYLYLSVGEQGVSTVLIREERSVQRPVYYVSKVLRNAE 362
            F  LK YLA   LL+ P  G+ L LYL++ ++  S+VL+REE   Q PVYY SK L +AE
Sbjct: 1134 FGQLKEYLARAPLLSTPREGDQLLLYLAISKRATSSVLVREEEGKQHPVYYTSKALVDAE 1193

Query: 363  LRYAEIEKAGLALVVTARRLRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSEY 542
             RY  +EK  LAL+  AR+LRPYF +H+++V T+ PLR V+ KP+ +GRLVKW++ELSE+
Sbjct: 1194 TRYPPMEKWALALITAARKLRPYFQAHQIVVMTDQPLRQVLQKPDASGRLVKWSVELSEF 1253

Query: 543  DIGFENRSAIKAQALADFV------------QESTRDDSSEGAWVIYVDGSVGSSGCGAG 686
            D+ +  R A KAQAL DF+            ++    + S+G W++ VDGS    G GAG
Sbjct: 1254 DLSYRPRGATKAQALVDFMVDCVEPGEEVQEEQPEEQEDSKGTWLVMVDGSCSEQGSGAG 1313

Query: 687  IVLISPQGIENDFAVRLEFKLSNNEAEYEAFIRGMQMAIEMGAVRMVIYMDSQLVHKQVM 866
            +V+ SP+G E  +AV+ EF+L+NN+AEYEAFI G+ +A  + A R+ I  DSQLV  Q+ 
Sbjct: 1314 VVIRSPEGTEITYAVKFEFQLTNNQAEYEAFITGLGLAHALRAERVEIRADSQLVCNQLN 1373

Query: 867  GEFEVREERMKRYVEAYRALEGRVKEIKICQVPREENGRADFLAKLASSALENQAKHITL 1046
             +F+ R E+M  Y++  + +    + +++ Q+ R EN RAD LA++A+ A     K + L
Sbjct: 1374 DQFQARGEKMGLYLKKAKQMVRLFQAVEVKQISRNENFRADMLARMAAIADPKLPKSVPL 1433

Query: 1047 LVAKETAL--GLEVGEIEEKEDWRSAIK 1124
             V    ++    EV  +   E W   I+
Sbjct: 1434 EVRTSPSIEEEAEVMRVSIGESWMDPIR 1461


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score =  319 bits (818), Expect = 2e-84
 Identities = 173/379 (45%), Positives = 245/379 (64%), Gaps = 6/379 (1%)
 Frame = +3

Query: 3    KVRAIREMAPPRDAKDVQCLTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKA 182
            KV+AI ++  PR+ K+V  LTGR+AAL RFISR  ++S PFFKVL+  K F W EE   A
Sbjct: 525  KVQAILDLLEPRNRKEVMMLTGRMAALARFISRSTDKSTPFFKVLKGNKDFSWGEEQSTA 584

Query: 183  FEDLKNYLADLSLLTKPLPGEPLYLYLSVGEQGVSTVLIREERSVQRPVYYVSKVLRNAE 362
            F  LK +L  L  L++P+ GE LYLY++V    VS V+IREE   Q P+Y++S  L  AE
Sbjct: 585  FRQLKAHLITLPTLSRPMLGETLYLYIAVTSATVSAVIIREEDKQQHPIYFISHTLLAAE 644

Query: 363  LRYAEIEKAGLALVVTARRLRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSEY 542
              Y  IEKA  A+VV AR+L+PYF +H V V T+ PL   +   E +GRL+KWA+ELS +
Sbjct: 645  TNYPLIEKAAFAVVVAARKLKPYFNAHPVTVLTDQPLEKALENFEKSGRLIKWAVELSGF 704

Query: 543  DIGFENRSAIKAQALADFVQEST-RDDSSEGAWVIYVDGSVGSSGCGAGIVLISPQGIEN 719
             I ++ R +IK QALADF+ E T +++ + G W +Y DGS  ++  GAGI++ISP G E 
Sbjct: 705  GIQYKPRPSIKGQALADFLAECTYQEEPNPGVWEVYTDGSSTTNSSGAGILIISPNGDEF 764

Query: 720  DFAVRLEFKLSNNEAEYEAFIRGMQMAIEMGAVRMVIYMDSQLVHKQVMGEFEVREERMK 899
            ++A++  F  SNNE+EYEA I G+++A   GA  +V+  DS LV  Q+ GE+E R++ M 
Sbjct: 765  EYALKFTFSASNNESEYEAVITGVELARAAGAEHIVLKTDSLLVTNQIRGEYEARDDGMV 824

Query: 900  RYVEAYRALEGRVKEIKICQVPREENGRADFLAKLASSALENQAKHITLLVAKETALGLE 1079
            RY+E  +A   ++K  +I  +PR EN RAD L+KL SS ++N ++  T+LV    A  + 
Sbjct: 825  RYLERVKADTAKLKSFQIQCIPRSENNRADTLSKLTSSTIKNVSR--TVLVDIRNAKSIT 882

Query: 1080 -----VGEIEEKEDWRSAI 1121
                 VG+IE +  W + I
Sbjct: 883  ETVGMVGDIEAETTWMTPI 901


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score =  315 bits (806), Expect = 4e-83
 Identities = 168/378 (44%), Positives = 242/378 (64%), Gaps = 4/378 (1%)
 Frame = +3

Query: 3    KVRAIREMAPPRDAKDVQCLTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKA 182
            K +AI EM  P+  K++Q L  RL +L+RF+ +LAER+ P  K+L+K  KF W +EC++ 
Sbjct: 1116 KCKAITEMRSPKGLKEIQRLVSRLTSLSRFVPKLAERTRPIIKLLKKTSKFEWTDECEQN 1175

Query: 183  FEDLKNYLADLSLLTKPLPGEPLYLYLSVGEQGVSTVLIREERSVQRPVYYVSKVLRNAE 362
            F+ LK +LA   ++ KP   EP+ +YL+V  + VS+ L++E ++ +RPVY+VS+VL +AE
Sbjct: 1176 FQQLKAFLASPPVIQKPNAREPIVVYLAVSNEAVSSALVQEIKAEERPVYFVSRVLHDAE 1235

Query: 363  LRYAEIEKAGLALVVTARRLRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSEY 542
             RY  +EK   ALV+TARR+R YF +HKVIVRTN P+  +++KP++AGR++ WA+ELSE+
Sbjct: 1236 TRYQMVEKVAFALVITARRMRMYFQNHKVIVRTNYPIMKILTKPDLAGRMIGWAVELSEF 1295

Query: 543  DIGFENRSAIKAQALADFVQESTRD-DSSEGAWVIYVDGSVGSSGCGAGIVLISPQGIEN 719
             I ++ R AIK+QALADF  E T         W +YVDGS  S   GAG+VL  P  I  
Sbjct: 1296 HIEYQPRGAIKSQALADFTAELTPYLTERTPRWTLYVDGSSNSRSSGAGVVLEGPGEIVV 1355

Query: 720  DFAVRLEFKLSNNEAEYEAFIRGMQMAIEMGAVRMVIYMDSQLVHKQVMGEFEVREERMK 899
            + A++ EFK SNN+AEYEA I G+ +AIE+    +    DS+LV  Q+ GE+EVRE  ++
Sbjct: 1356 EQAMKFEFKTSNNQAEYEAIIAGLHLAIELEVTNITCKSDSRLVVGQLTGEYEVRETLLQ 1415

Query: 900  RYVEAYRALEGRVKEIKICQVPREENGRADFLAKLAS---SALENQAKHITLLVAKETAL 1070
            +Y    + L  R KEI    V RE N RAD L++LA+         A H+TL  AK +  
Sbjct: 1416 QYFHFVKNLLNRFKEISFQHVRRENNTRADALSRLATLKKKGAHRSAIHVTL--AKPSVG 1473

Query: 1071 GLEVGEIEEKEDWRSAIK 1124
              E    + + +W + IK
Sbjct: 1474 TEECMATDTQPNWMTPIK 1491


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  307 bits (787), Expect = 7e-81
 Identities = 175/404 (43%), Positives = 243/404 (60%), Gaps = 21/404 (5%)
 Frame = +3

Query: 3    KVRAIREMAPPRDAKDVQCLTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKA 182
            ++ A   M  PR+ K+VQ LTGR+AALNRFISR  ++SLPF+++L+  K F+WDE+C++A
Sbjct: 236  QINAFLNMPSPRNFKEVQRLTGRIAALNRFISRSTDKSLPFYQILKGNKGFLWDEKCEEA 295

Query: 183  FEDLKNYLADLSLLTKPLPGEPLYLYLSVGEQGVSTVLIREERSVQRPVYYVSKVLRNAE 362
            F  LK YL    +L+KP   E LYLY+SV    VS VL+RE+R  Q+P+YYVSK + + E
Sbjct: 296  FGQLKAYLTTPPILSKPEVDEKLYLYVSVSNHAVSGVLVREDRGEQKPIYYVSKSMTDPE 355

Query: 363  LRYAEIEKAGLALVVTARRLRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSEY 542
             RY  +EK  LA+V +AR+LRPYF SH V V TN PLR ++  P  +GRL KWA+ELSEY
Sbjct: 356  TRYTMMEKLALAVVTSARKLRPYFQSHPVQVLTNQPLRTILHSPSQSGRLAKWAVELSEY 415

Query: 543  DIGFENRSAIKAQALADFVQE----STRDDSSEGAWVIYVDGSVGSSGCGAGIVLISPQG 710
            DI F++R ++KAQ LADF+ E     T +      W ++VDGS    G   GI L SP  
Sbjct: 416  DIEFKSRISMKAQVLADFLTELPIPGTIERPENQTWKLHVDGSSTKQGSVVGIKLESPTS 475

Query: 711  IENDFAVRLEFKLSNNEAEYEAFIRGMQMAIEMGAVRMVIYMDSQLVHKQVMGEFEVREE 890
               + + RL F  SNNEAEYEA I G+++A  +GA  ++ Y DSQLV  Q  G++E ++ 
Sbjct: 476  EILEQSFRLLFDASNNEAEYEALIAGLRLAQGVGAKEILAYCDSQLVVNQFNGDYEAKDS 535

Query: 891  RMKRYVEAYRALEGRVKEIKICQVPREENGRADFLAKLAS---------------SALEN 1025
            RM+ Y+E  + L     + ++ ++ R EN  AD LA LAS               S    
Sbjct: 536  RMEAYLEVAKDLSKNFSKFELIRILRGENTTADALAALASTSDPGLKRVIPVECISERSI 595

Query: 1026 QAKHITLLVAKETALGLEVGE--IEEKEDWRSAIKGNTKS*RNP 1151
            Q    TL++ +  A   + GE  IE   + R   +G+  S + P
Sbjct: 596  QDNKETLVITRSRAAARDRGEPDIEPPSNKRRKSRGSNTSNKGP 639


>ref|XP_004301972.1| PREDICTED: uncharacterized protein LOC101291061 [Fragaria vesca
            subsp. vesca]
          Length = 567

 Score =  306 bits (783), Expect = 2e-80
 Identities = 165/374 (44%), Positives = 233/374 (62%), Gaps = 33/374 (8%)
 Frame = +3

Query: 24   MAPPRDAKDVQCLTGRLAALNRFISRLAERSLPFFKVLRKAKKFV-WDEECQKAFEDLKN 200
            M  P   K+VQ LTGR+AALNRFISR  +R LPFFK L+K  K + W +EC+KAF +LK 
Sbjct: 1    MKSPTTKKEVQSLTGRVAALNRFISRSTDRCLPFFKALKKVGKSIDWTDECEKAFINLKE 60

Query: 201  YLADLSLLTKPLPGEPLYLYLSVGEQGVSTVLIREERSVQRPVYYVSKVLRNAELRYAEI 380
            ++    +L+KP  G+ L +YLSV    +S+VL+REE   +  +YYVSK   +AE RY EI
Sbjct: 61   HMGKAPVLSKPRSGDVLLIYLSVSTAAISSVLVREEEKHEEAIYYVSKGFVDAEFRYPEI 120

Query: 381  EKAGLALVVTARRLRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSEYDIGFEN 560
            EK   AL+  AR+LRPYF +H + V TN PL+ V+ KPE +GRLVK A+EL E+DI +  
Sbjct: 121  EKLAFALITLARKLRPYFQAHTIKVMTNQPLKQVLWKPETSGRLVKCAVELGEFDIHYSP 180

Query: 561  RSAIKAQALADFVQEST-------------------------RDDSSEGA-------WVI 644
            R+A+K QA+ADF+ + T                         ++++   A       W +
Sbjct: 181  RTAVKGQAIADFISKFTNPLFPSNGGNTENTIHPPRDRVQPLKEETGTPAVCDHDPIWTL 240

Query: 645  YVDGSVGSSGCGAGIVLISPQGIENDFAVRLEFKLSNNEAEYEAFIRGMQMAIEMGAVRM 824
            YVDGS   SG GAG+VL +PQ  E ++A+R  FK SNNEA+YEA I G+++A E+ A ++
Sbjct: 241  YVDGSSNQSGSGAGLVLTTPQNDELEYALRFNFKASNNEAKYEALIAGLRIAKELEATKV 300

Query: 825  VIYMDSQLVHKQVMGEFEVREERMKRYVEAYRALEGRVKEIKICQVPREENGRADFLAKL 1004
             ++ DSQLV  QV+GE++ ++  M  Y+   ++L        + Q+PRE+N RAD LA+L
Sbjct: 301  RVHSDSQLVVNQVLGEYQAKDHVMAAYLIKVKSLLSCFTSYDVVQIPREQNERADALARL 360

Query: 1005 ASSALENQAKHITL 1046
            AS+   N  KHI +
Sbjct: 361  ASAIDCNVGKHIPI 374


>gb|AAD27571.1|AF114171_12 polyprotein [Sorghum bicolor] gi|4378066|gb|AAD19359.1| polyprotein
            [Sorghum bicolor]
          Length = 1877

 Score =  301 bits (772), Expect = 4e-79
 Identities = 180/394 (45%), Positives = 237/394 (60%), Gaps = 17/394 (4%)
 Frame = +3

Query: 3    KVRAIREMAPPRDAKDVQCLTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKA 182
            K +AI  MA P + K+VQ LTGR+AALNRFISR AERSLPFFKVLR+ K   W  E  +A
Sbjct: 1092 KTKAIMSMAEPSNKKEVQRLTGRIAALNRFISRSAERSLPFFKVLREGKT-EWGPEQSEA 1150

Query: 183  FEDLKNYLADLSLLTKPLPGEPLYLYLSVGEQGVSTVLIRE----ERSVQRPVYYVSKVL 350
            F  LKNY+A   L+T P P  PL LY++  E  VS VL+ E    + +VQRPVYYVS+ L
Sbjct: 1151 FRQLKNYIATNLLVTVPEPDTPLLLYVAASEHAVSGVLVHETSDTKGTVQRPVYYVSEAL 1210

Query: 351  RNAELRYAEIEKAGLALVVTARRLRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIE 530
              A+L Y EIEK   A++  +R+L+ YF SH++ V T+ PL +++   E +GR+ KWA E
Sbjct: 1211 SGAKLNYTEIEKIAYAVLCASRKLKHYFQSHEIKVPTSQPLGDILRNKEASGRIGKWAAE 1270

Query: 531  LSEYDIGFENRSAIKAQALADFVQESTRDDSSEGA-----WVIYVDGSVGSSGCGAGIVL 695
            LS++DI +  R++IK+QALADF+ + T  + +E       W +Y DG+ G +G GA  VL
Sbjct: 1271 LSQFDITYVPRTSIKSQALADFMADWTPSNKNEEKVIDQPWTLYTDGAWGQAGAGAAAVL 1330

Query: 696  ISPQGIENDFAVRLEFKLSNNEAEYEAFIRGMQMAIEMGAVRMVIYMDSQLVHKQVMGEF 875
            I+P G++  FA+RLEFK +NN AEYE  I G+  A   GA  +VI  DSQ+V  QV  E+
Sbjct: 1331 IAPSGLKLKFAIRLEFKATNNIAEYEGLILGLNKAKASGAKTLVIKTDSQVVAGQVEKEY 1390

Query: 876  EVREERMKRYVEAYRALEGRVKEIKICQVPREENGRADFLAKLASSAL---ENQAKHITL 1046
                  + RY+   R LE R K   +  +PR EN  AD LAK A++     E     I  
Sbjct: 1391 LAHNPELARYLAVVRGLERRFKGFTLQYIPRAENYEADELAKAAANNTPLPEGTFHQIVT 1450

Query: 1047 LVAKET-ALGLEVGEIEEKEDWRSAI----KGNT 1133
              A ET         + E EDWR AI    KG T
Sbjct: 1451 TPATETLPKAFRSVLLTESEDWRQAIADCLKGKT 1484


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  301 bits (771), Expect = 5e-79
 Identities = 155/342 (45%), Positives = 222/342 (64%), Gaps = 7/342 (2%)
 Frame = +3

Query: 3    KVRAIREMAPPRDAKDVQCLTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKA 182
            ++RAI E+  PR+A++VQ LTGR+AALNRFISR  ++ LPF+ +L++  +F WD++ ++A
Sbjct: 1039 QIRAILELPSPRNAREVQRLTGRIAALNRFISRSTDKCLPFYNLLKRRAQFDWDKDSEEA 1098

Query: 183  FEDLKNYLADLSLLTKPLPGEPLYLYLSVGEQGVSTVLIREERSVQRPVYYVSKVLRNAE 362
            FE LK+YL+   +L KP  GE LYLY++V +  VS+VL+RE+R  QRP++Y SK L  AE
Sbjct: 1099 FEKLKDYLSTPPILVKPEVGETLYLYIAVSDHAVSSVLVREDRGEQRPIFYTSKSLVEAE 1158

Query: 363  LRYAEIEKAGLALVVTARRLRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSEY 542
             RY  IEKA LA+V +AR+LRPYF SH + V T+ PLR  +  P  +GR+ KWA+ELSEY
Sbjct: 1159 TRYPVIEKAALAVVTSARKLRPYFQSHTIAVLTDQPLRVALHSPSQSGRMTKWAVELSEY 1218

Query: 543  DIGFENRSAIKAQALADFVQESTRDDSSEGA-------WVIYVDGSVGSSGCGAGIVLIS 701
            DI F  R A+K+Q LADF+ E     +           W +YVDGS  + G G GI L+S
Sbjct: 1219 DIDFRPRPAMKSQVLADFLIELPLQSAERAVSGNRGEEWSLYVDGSSSARGSGIGIRLVS 1278

Query: 702  PQGIENDFAVRLEFKLSNNEAEYEAFIRGMQMAIEMGAVRMVIYMDSQLVHKQVMGEFEV 881
            P     + + RL F  +NN AEYE  I G+++A  M    +  + DSQL+  Q+ GE+E 
Sbjct: 1279 PTAEVLEQSFRLRFVATNNVAEYEVLIAGLRLAAGMQITTIHAFTDSQLIAGQLSGEYEA 1338

Query: 882  REERMKRYVEAYRALEGRVKEIKICQVPREENGRADFLAKLA 1007
            + E+M  Y++  + +    +  K+ ++PR +N  AD LA LA
Sbjct: 1339 KNEKMDAYLKIVQLMTKDFENFKLSKIPRGDNAPADALAALA 1380


>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
          Length = 1106

 Score =  298 bits (763), Expect = 4e-78
 Identities = 156/352 (44%), Positives = 221/352 (62%), Gaps = 15/352 (4%)
 Frame = +3

Query: 3    KVRAIREMAPPRDAKDVQCLTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKA 182
            +++AI E+ PPR+ K+VQ L G  A LNRFISR A+R  PF+++L K K F+W +EC  A
Sbjct: 308  QIKAILELHPPRNPKEVQKLAGMFAVLNRFISRSADRCRPFYRLLHKWKDFLWTDECNLA 367

Query: 183  FEDLKNYLADLSLLTKPLPGEPLYLYLSVGEQGVSTVLIREERSVQRPVYYVSKVLRNAE 362
            FEDL+ YLA+  +L++P   E LY YL+V    VS VLIR +  VQ+P+YY+SK L+ AE
Sbjct: 368  FEDLRQYLANPLILSRPEKKEVLYAYLAVMNYAVSLVLIRNDDGVQKPIYYISKSLQEAE 427

Query: 363  LRYAEIEKAGLALVVTARRLRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSEY 542
             RY  +EKA LA+V   R+L  YF +H ++V T LPL+ +M K +  GR+ KW  +L  Y
Sbjct: 428  RRYLPLEKALLAVVHATRKLPHYFQAHTIVVLTQLPLQAIMRKLDYTGRVAKWGTKLGAY 487

Query: 543  DIGFENRSAIKAQALADFVQESTRDDSSE---------------GAWVIYVDGSVGSSGC 677
            D+ +  R+AIK Q L DFV E T  D+ +                 W +  DG+    G 
Sbjct: 488  DVKYMPRTAIKGQDLVDFVAEFTESDTKQEDAMMTVMTIGLGNVPLWEVCTDGASNRKGA 547

Query: 678  GAGIVLISPQGIENDFAVRLEFKLSNNEAEYEAFIRGMQMAIEMGAVRMVIYMDSQLVHK 857
            G G+VLI+P+ +  + ++RL F  +NNEAEYEA + G QM   +G   + +Y DS+LV  
Sbjct: 548  GIGVVLITPEKLVMEKSLRLGFIATNNEAEYEALLAGAQMVRHLGGEVVELYCDSRLVFG 607

Query: 858  QVMGEFEVREERMKRYVEAYRALEGRVKEIKICQVPREENGRADFLAKLASS 1013
            Q+ GEFEVR+ERMK+Y+E  + +    K  ++ Q+PR +N  AD LA LA+S
Sbjct: 608  QINGEFEVRDERMKKYLERVKGVLRLFKSFQVRQIPRGQNAHADLLAMLATS 659


>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
          Length = 764

 Score =  293 bits (750), Expect = 1e-76
 Identities = 150/339 (44%), Positives = 229/339 (67%), Gaps = 2/339 (0%)
 Frame = +3

Query: 60   LTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKAFEDLKNYLADLSLLTKPLP 239
            LTGR+AAL RFISR A+++LPFF++LR  K F W EE + AF  +K +L  L  +T+P  
Sbjct: 3    LTGRMAALTRFISRSADKALPFFQLLRGNKTFTWGEEERTAFAAIKEHLKKLPTVTRPKE 62

Query: 240  GEPLYLYLSVGEQGVSTVLIREERSVQRPVYYVSKVLRNAELRYAEIEKAGLALVVTARR 419
            GE L LY+S   + V+ VL+ E    Q P+Y+VS VL  AE RY  +EK  LA+++ AR+
Sbjct: 63   GERLQLYISASPKTVAAVLLVERIKTQLPIYFVSHVLNEAEQRYPLLEKMSLAVMIAARK 122

Query: 420  LRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSEYDIGFENRSAIKAQALADFV 599
            LRPYF +H + V +N PL   + K + +GRL++WA+ELSE+++ ++ R+AIKAQALADF+
Sbjct: 123  LRPYFDAHTIQVLSNHPLEKALQKLDTSGRLLRWAVELSEFEVEYKPRTAIKAQALADFI 182

Query: 600  QESTRDDSSE--GAWVIYVDGSVGSSGCGAGIVLISPQGIENDFAVRLEFKLSNNEAEYE 773
             E++ ++  E  G W + VDGS   +G GAGI++ SP+G  N F   ++FK SNNEAEYE
Sbjct: 183  VEASYEEEEEPVGVWKLAVDGSAAQTGSGAGIIMTSPEG--NVFEYAIKFKASNNEAEYE 240

Query: 774  AFIRGMQMAIEMGAVRMVIYMDSQLVHKQVMGEFEVREERMKRYVEAYRALEGRVKEIKI 953
            A I G++M +   A ++ +  DSQLV  Q+ GE+E RE  M++Y++  + L  ++  +++
Sbjct: 241  AAIAGIKMCMAADAKKIRLQTDSQLVASQIRGEYEAREPAMQKYLQMIKDLAAQLISLEV 300

Query: 954  CQVPREENGRADFLAKLASSALENQAKHITLLVAKETAL 1070
              VPR +N +AD L+KLASS L++  + + + V ++ ++
Sbjct: 301  VLVPRADNSQADALSKLASSTLQDLNRTVMVEVMEQRSI 339


>gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1889

 Score =  292 bits (747), Expect = 3e-76
 Identities = 159/380 (41%), Positives = 236/380 (62%), Gaps = 7/380 (1%)
 Frame = +3

Query: 3    KVRAIREMAPPRDAKDVQCLTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKA 182
            K+ AI +M PPR+ ++VQ LTGR+A+L+RF+S+ AE+ LPFFK LR A  F W  ECQ+A
Sbjct: 1184 KIAAIHQMEPPRNTREVQRLTGRMASLSRFLSKSAEKGLPFFKTLRGANTFEWTAECQQA 1243

Query: 183  FEDLKNYLADLSLLTKPLPGEPLYLYLSVGEQGVSTVLIREERSVQRPVYYVSKVLRNAE 362
            F+DLK YL ++  L  P  G+PL +Y++     VS VL++EE + Q PVY+VS+ L+  +
Sbjct: 1244 FDDLKKYLHEMPTLASPPKGQPLLMYVAATPATVSAVLVQEEENRQVPVYFVSEALQGPK 1303

Query: 363  LRYAEIEKAGLALVVTARRLRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSEY 542
             RY+E+EK   A+V+ +R+LR YFLSH + + +  P+  V++  EVAGR+ KWA+EL  +
Sbjct: 1304 TRYSEVEKLIYAIVMASRKLRHYFLSHDITIPSAYPIGEVLTNKEVAGRIAKWAMELLPF 1363

Query: 543  DIGFENRSAIKAQALADFVQEST-----RDDSSEGAWVIYVDGSVGSSGCGAGIVLISPQ 707
            D+ + +R+AIK+Q LADFV E T     + +  E  W+++ DG+  ++G GA  V+ +P 
Sbjct: 1364 DLKYISRTAIKSQVLADFVAEWTPNEVEQQEEVEKPWIVFSDGACNAAGAGAAAVVKTPM 1423

Query: 708  GIENDFAVRLEFKLSNNEAEYEAFIRGMQMAIEMGAVRMVIYMDSQLVHKQVMGEFEVRE 887
                 ++V+L F  +NN AEYE  +  M+ A  + A R+++  DS+LV       FEV+E
Sbjct: 1424 KQTLKYSVQLAFPSTNNTAEYEGVLLAMRKARALRARRLIVKTDSKLVGGHFSKSFEVKE 1483

Query: 888  ERMKRYVEAYRALEGRVKEIKICQVPREENGRADFLAKLASSA--LENQAKHITLLVAKE 1061
            E M +Y+E  R  E     I +  + REENG AD LAK A++   LEN    I    + E
Sbjct: 1484 ETMAKYLEEARLNEKHFLGITVKAITREENGEADELAKAAATGQPLENSFFDIITQPSYE 1543

Query: 1062 TALGLEVGEIEEKEDWRSAI 1121
                 EV  I+ + DWR  I
Sbjct: 1544 KK---EVACIQREGDWREPI 1560


>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score =  291 bits (746), Expect = 4e-76
 Identities = 157/380 (41%), Positives = 236/380 (62%), Gaps = 7/380 (1%)
 Frame = +3

Query: 3    KVRAIREMAPPRDAKDVQCLTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKA 182
            K+ AI +M PP++ ++VQ LTGR+A+L+RF+S+ AE+ LPFFK LR A  F W  ECQ+A
Sbjct: 1202 KIAAIHQMEPPKNTREVQRLTGRMASLSRFLSKSAEKGLPFFKTLRGANTFEWTAECQQA 1261

Query: 183  FEDLKNYLADLSLLTKPLPGEPLYLYLSVGEQGVSTVLIREERSVQRPVYYVSKVLRNAE 362
            F+DLK YL ++  L  P  G+PL +Y++     VS VL++EE + Q PVY+VS+ L+  +
Sbjct: 1262 FDDLKKYLHEMPTLASPPKGQPLLMYVAATPATVSAVLVQEEENRQVPVYFVSEALQGPK 1321

Query: 363  LRYAEIEKAGLALVVTARRLRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSEY 542
             RY+E+EK   A+V+ +R+LR YFLSH + + +  P+  V++  EVAGR+ KWA+EL  +
Sbjct: 1322 TRYSEVEKLIYAIVMASRKLRHYFLSHDITIPSAYPIGEVLTNKEVAGRIAKWAMELLPF 1381

Query: 543  DIGFENRSAIKAQALADFVQEST-----RDDSSEGAWVIYVDGSVGSSGCGAGIVLISPQ 707
            D+ + +R+AIK+Q LADFV E T     + +  E  W+++ DG+  ++G GA  V+ +P 
Sbjct: 1382 DLKYTSRTAIKSQVLADFVAEWTPNEVEQQEEVEKPWIVFSDGACNAAGAGAAAVVKTPM 1441

Query: 708  GIENDFAVRLEFKLSNNEAEYEAFIRGMQMAIEMGAVRMVIYMDSQLVHKQVMGEFEVRE 887
                 ++V+L F  +NN AEYE  +  M+ A  +GA R+++  DS+LV       FE +E
Sbjct: 1442 KQTLKYSVQLAFPSTNNTAEYEGVLLAMRKARALGARRLIVKTDSKLVAGHFSKSFEAKE 1501

Query: 888  ERMKRYVEAYRALEGRVKEIKICQVPREENGRADFLAKLASSA--LENQAKHITLLVAKE 1061
            + M +Y+E  R  E     I +  + REENG AD LAK A++   LEN    I    + E
Sbjct: 1502 KTMAKYLEEARLNEKHFLGITVKAITREENGEADELAKAAATGQPLENSFFDIITQPSYE 1561

Query: 1062 TALGLEVGEIEEKEDWRSAI 1121
                 EV  I+ + DWR  I
Sbjct: 1562 KK---EVACIQREGDWREPI 1578


>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
            gi|323435157|ref|YP_004222375.1| hypothetical protein
            BevumaM_p142 [Beta vulgaris subsp. maritima]
            gi|346683249|ref|YP_004842181.1| hypothetical protein
            BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
            orf764 [Beta vulgaris subsp. vulgaris]
            gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
            vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
            hypothetical protein [Beta vulgaris subsp. maritima]
            gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
            vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
            hypothetical protein [Beta macrocarpa]
            gi|384977907|emb|CBL54131.1| hypothetical protein
            (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 764

 Score =  291 bits (745), Expect = 5e-76
 Identities = 149/339 (43%), Positives = 229/339 (67%), Gaps = 2/339 (0%)
 Frame = +3

Query: 60   LTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKAFEDLKNYLADLSLLTKPLP 239
            LTGR+AAL RFIS+ A+++LPFF++LR  K F W EE + AF  +K +L  L  +T+P  
Sbjct: 3    LTGRMAALTRFISKSADKALPFFQLLRGNKTFKWGEEERTAFAAIKEHLKKLPTVTRPKE 62

Query: 240  GEPLYLYLSVGEQGVSTVLIREERSVQRPVYYVSKVLRNAELRYAEIEKAGLALVVTARR 419
            GE L LY+S   + V+ VL+ E    Q P+Y+VS VL  AE RY  +EK  LA+++ AR+
Sbjct: 63   GERLQLYISASPKTVAAVLLVERIKTQLPIYFVSHVLNEAEQRYPLLEKMSLAVMIAARK 122

Query: 420  LRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSEYDIGFENRSAIKAQALADFV 599
            LRPYF +H + V +N PL   + K + +GRL++WA+ELSE+++ ++ R+AIKAQALADF+
Sbjct: 123  LRPYFDAHTIQVLSNHPLEKALQKLDTSGRLLRWAVELSEFEVEYKPRTAIKAQALADFI 182

Query: 600  QESTRDDSSE--GAWVIYVDGSVGSSGCGAGIVLISPQGIENDFAVRLEFKLSNNEAEYE 773
             E++ ++  E  G W + VDGS   +G GAGI++ SP+G  N F   ++FK SNNEAEYE
Sbjct: 183  VEASYEEEEEPVGVWKLAVDGSAAQTGSGAGIIMTSPEG--NVFEYAIKFKASNNEAEYE 240

Query: 774  AFIRGMQMAIEMGAVRMVIYMDSQLVHKQVMGEFEVREERMKRYVEAYRALEGRVKEIKI 953
            A I G++M +   A ++ +  DSQLV  Q+ GE+E RE  M++Y++  + L  ++  +++
Sbjct: 241  AAIAGIKMCMAADAKKIRLQTDSQLVASQIRGEYEAREPAMQKYLQMIKDLAAQLISLEV 300

Query: 954  CQVPREENGRADFLAKLASSALENQAKHITLLVAKETAL 1070
              VPR +N +AD L+KLASS L++  + + + V ++ ++
Sbjct: 301  VLVPRADNSQADALSKLASSTLQDLNRTVMVEVMEQRSI 339


>emb|CAN77422.1| hypothetical protein VITISV_032393 [Vitis vinifera]
          Length = 987

 Score =  291 bits (744), Expect = 7e-76
 Identities = 153/350 (43%), Positives = 224/350 (64%), Gaps = 7/350 (2%)
 Frame = +3

Query: 3    KVRAIREMAPPRDAKDVQCLTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKA 182
            +V+A+ E  PPR+ K++Q LTG+L AL RFI+R  +   PFF  +RKA    W + CQ A
Sbjct: 236  QVKAVMETPPPRNKKELQRLTGKLVALGRFIARFTDELRPFFLAIRKAGTHGWTDNCQNA 295

Query: 183  FEDLKNYLADLSLLTKPLPGEPLYLYLSVGEQGVSTVLIR-EERSVQRPVYYVSKVLRNA 359
             E +K+YL    +L+ P+P E LY+YL+V E  +S VL R      Q+P+YYVS+ L + 
Sbjct: 296  LERIKHYLMQPPILSSPIPKEKLYMYLAVSEWAISVVLFRCPSPKEQKPIYYVSRALADV 355

Query: 360  ELRYAEIEKAGLALVVTARRLRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSE 539
            E RY+++E   LAL   A++LRPYF +H VIV T+ PLRN++ KP++ GR+++WAIELSE
Sbjct: 356  ETRYSKMELTALALRSAAQKLRPYFQAHPVIVLTDQPLRNILHKPDLTGRMLQWAIELSE 415

Query: 540  YDIGFENRSAIKAQALADFVQESTR------DDSSEGAWVIYVDGSVGSSGCGAGIVLIS 701
            + I F+ R ++K Q +ADFV E +R      + S +  W + VDG+  SSG G G++L S
Sbjct: 416  FGIEFQPRLSMKGQVMADFVLEYSRKPGQHEESSKKEWWTLRVDGASRSSGSGIGLLLQS 475

Query: 702  PQGIENDFAVRLEFKLSNNEAEYEAFIRGMQMAIEMGAVRMVIYMDSQLVHKQVMGEFEV 881
            P G   + A+RL F  SNNEAEYEA + G+ +A+ +   ++ ++ DSQLV K V  E+E 
Sbjct: 476  PTGEHLEQAIRLGFSASNNEAEYEAILSGLDLALALSVSKLRVFSDSQLVVKHVQEEYET 535

Query: 882  REERMKRYVEAYRALEGRVKEIKICQVPREENGRADFLAKLASSALENQA 1031
            ++ RM RY+   R    +  E  I ++ R +N RAD LA +A+S L  +A
Sbjct: 536  KDARMARYLAKVRNTLQQFTEWTIEKIKRADNRRADALAGIAASLLIKEA 585


>gb|ABF97034.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1908

 Score =  290 bits (743), Expect = 9e-76
 Identities = 158/341 (46%), Positives = 214/341 (62%), Gaps = 5/341 (1%)
 Frame = +3

Query: 3    KVRAIREMAPPRDAKDVQCLTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKA 182
            K+ AI++M PP    +VQ L GR+AAL+RF+S+ AER LPFFK LR A KF W  ECQ A
Sbjct: 1123 KIDAIQQMKPPSSVHEVQKLAGRIAALSRFLSKAAERGLPFFKTLRGAGKFNWTPECQAA 1182

Query: 183  FEDLKNYLADLSLLTKPLPGEPLYLYLSVGEQGVSTVLIREERSVQRPVYYVSKVLRNAE 362
            F++LK YL     L  P PG  L LYL+     +S  L++E  S Q+PVY+VS+ L+ A+
Sbjct: 1183 FDELKQYLQSPPALISPPPGSELLLYLAASPVAISAALVQETESGQKPVYFVSEALQGAK 1242

Query: 363  LRYAEIEKAGLALVVTARRLRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSEY 542
             RY E+EK   ALV+ +R+L+ YF ++KVIV +  PL  ++   EV GRL KWA ELS +
Sbjct: 1243 TRYIEMEKLAYALVMASRKLKHYFQANKVIVPSQYPLGEILRGKEVTGRLSKWAAELSPF 1302

Query: 543  DIGFENRSAIKAQALADFVQEST-----RDDSSEGAWVIYVDGSVGSSGCGAGIVLISPQ 707
            D+ F   SAIK+Q LADFV E T       + +E  WV+  DGS    G G   VL SP 
Sbjct: 1303 DLYFVAHSAIKSQVLADFVAEWTPILAPDPEPAEQFWVMCSDGSWSHKGAGVATVLFSPN 1362

Query: 708  GIENDFAVRLEFKLSNNEAEYEAFIRGMQMAIEMGAVRMVIYMDSQLVHKQVMGEFEVRE 887
            G+   +A RL+F  +NN AEYEA + G++ A  +G  R++I  DS+LV   V   FE +E
Sbjct: 1363 GVPIRYAARLQFDTTNNVAEYEAVLLGLRKAKALGVRRLLIRTDSKLVAGHVDKSFEAKE 1422

Query: 888  ERMKRYVEAYRALEGRVKEIKICQVPREENGRADFLAKLAS 1010
            E MK+Y+EA R++E     I +  +PR++N  AD LAK A+
Sbjct: 1423 EGMKKYLEAVRSMEKCFTGITVKHLPRDQNEEADALAKSAA 1463


>emb|CAD39384.2| OSJNBb0016B03.14 [Oryza sativa Japonica Group]
          Length = 1323

 Score =  290 bits (743), Expect = 9e-76
 Identities = 158/341 (46%), Positives = 213/341 (62%), Gaps = 5/341 (1%)
 Frame = +3

Query: 3    KVRAIREMAPPRDAKDVQCLTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKA 182
            K+ AI++M PP    +V+ L GR+AAL+RF+S+ A+R LPFFK LR A KF W  ECQ+A
Sbjct: 586  KIDAIQQMKPPSSVHEVKKLVGRIAALSRFLSKAAKRGLPFFKTLRGAGKFNWTPECQEA 645

Query: 183  FEDLKNYLADLSLLTKPLPGEPLYLYLSVGEQGVSTVLIREERSVQRPVYYVSKVLRNAE 362
            F++LK YL     L  P PG  L LYL+     VS  L++E +  Q+PVY++S+ L+ A+
Sbjct: 646  FDELKQYLQSPPALISPTPGSELLLYLAASPVAVSAALVQETKFGQKPVYFISEALQGAK 705

Query: 363  LRYAEIEKAGLALVVTARRLRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSEY 542
             RY E+EK   ALV+ +R+L+ YF +HKVIV    PL  ++   EV GRL KWA ELS +
Sbjct: 706  TRYIEMEKLAYALVMASRKLKHYFQAHKVIVPPQYPLGEILRGKEVTGRLSKWAAELSPF 765

Query: 543  DIGFENRSAIKAQALADFVQEST-----RDDSSEGAWVIYVDGSVGSSGCGAGIVLISPQ 707
            D+ F  R+AIK+Q LADFV E T       +  E  WV+  DGS    G G   VLISP 
Sbjct: 766  DLHFVARTAIKSQVLADFVAEWTLVFAPETELVEQLWVMSSDGSWSHKGAGIAAVLISPN 825

Query: 708  GIENDFAVRLEFKLSNNEAEYEAFIRGMQMAIEMGAVRMVIYMDSQLVHKQVMGEFEVRE 887
            G+   +A RL+F  +NN AEYEA + G++ A  +G  R++I  DS+LV   V   FE +E
Sbjct: 826  GVPIRYAARLQFNTTNNAAEYEAILLGLRRAKALGVRRLLIRTDSKLVAGHVDKSFEAKE 885

Query: 888  ERMKRYVEAYRALEGRVKEIKICQVPREENGRADFLAKLAS 1010
            E MKRY+EA R+ E     I +  +PR +N  AD LAK A+
Sbjct: 886  EGMKRYLEAVRSTEKCFTGITVEHLPRGQNEEADALAKSAA 926


>gb|AAP44597.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1862

 Score =  290 bits (743), Expect = 9e-76
 Identities = 158/341 (46%), Positives = 214/341 (62%), Gaps = 5/341 (1%)
 Frame = +3

Query: 3    KVRAIREMAPPRDAKDVQCLTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKA 182
            K+ AI++M PP    +VQ L GR+AAL+RF+S+ AER LPFFK LR A KF W  ECQ A
Sbjct: 1077 KIDAIQQMKPPSSVHEVQKLAGRIAALSRFLSKAAERGLPFFKTLRGAGKFNWTPECQAA 1136

Query: 183  FEDLKNYLADLSLLTKPLPGEPLYLYLSVGEQGVSTVLIREERSVQRPVYYVSKVLRNAE 362
            F++LK YL     L  P PG  L LYL+     +S  L++E  S Q+PVY+VS+ L+ A+
Sbjct: 1137 FDELKQYLQSPPALISPPPGSELLLYLAASPVAISAALVQETESGQKPVYFVSEALQGAK 1196

Query: 363  LRYAEIEKAGLALVVTARRLRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSEY 542
             RY E+EK   ALV+ +R+L+ YF ++KVIV +  PL  ++   EV GRL KWA ELS +
Sbjct: 1197 TRYIEMEKLAYALVMASRKLKHYFQANKVIVPSQYPLGEILRGKEVTGRLSKWAAELSPF 1256

Query: 543  DIGFENRSAIKAQALADFVQEST-----RDDSSEGAWVIYVDGSVGSSGCGAGIVLISPQ 707
            D+ F   SAIK+Q LADFV E T       + +E  WV+  DGS    G G   VL SP 
Sbjct: 1257 DLYFVAHSAIKSQVLADFVAEWTPILAPDPEPAEQFWVMCSDGSWSHKGAGVATVLFSPN 1316

Query: 708  GIENDFAVRLEFKLSNNEAEYEAFIRGMQMAIEMGAVRMVIYMDSQLVHKQVMGEFEVRE 887
            G+   +A RL+F  +NN AEYEA + G++ A  +G  R++I  DS+LV   V   FE +E
Sbjct: 1317 GVPIRYAARLQFDTTNNVAEYEAVLLGLRKAKALGVRRLLIRTDSKLVAGHVDKSFEAKE 1376

Query: 888  ERMKRYVEAYRALEGRVKEIKICQVPREENGRADFLAKLAS 1010
            E MK+Y+EA R++E     I +  +PR++N  AD LAK A+
Sbjct: 1377 EGMKKYLEAVRSMEKCFTGITVKHLPRDQNEEADALAKSAA 1417


>emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]
          Length = 2097

 Score =  289 bits (740), Expect = 2e-75
 Identities = 151/344 (43%), Positives = 219/344 (63%), Gaps = 7/344 (2%)
 Frame = +3

Query: 3    KVRAIREMAPPRDAKDVQCLTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKA 182
            K+ AI +M PP   K+VQ LTG +AAL+RFI+RL E+ LPFFK+LRK   F W +E   A
Sbjct: 1286 KIAAIDQMRPPTTKKEVQKLTGCMAALSRFIARLGEKGLPFFKLLRKHGSFEWTKEANDA 1345

Query: 183  FEDLKNYLADLSLLTKPLPGEPLYLYLSVGEQGVSTVLIREERSVQRPVYYVSKVLRNAE 362
            FE+LK YL    +L  P PGE L +Y++   Q VS VL+ E  ++QRPVYYVS+VL   +
Sbjct: 1346 FEELKKYLTSTPVLVSPRPGETLLIYVAATLQTVSGVLVVERDNIQRPVYYVSEVLHGPK 1405

Query: 363  LRYAEIEKAGLALVVTARRLRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSEY 542
             RY  ++K    L++++R+LR YF +HKV+V T  PL  V+   E +GR+ KWA+EL  +
Sbjct: 1406 ERYPHVQKLLYGLLMSSRKLRHYFQAHKVVVPTGYPLGQVLGNRESSGRIAKWAVELGAF 1465

Query: 543  DIGFENRSAIKAQALADFVQESTRDDSSEG-------AWVIYVDGSVGSSGCGAGIVLIS 701
            D+ F +R+AIK+QA+A+F+ E T  + ++G        W +Y DGS+   G GAG+VLIS
Sbjct: 1466 DLHFISRTAIKSQAIAEFIAEWTNPEPTQGPEYEHHDEWTLYFDGSLMLQGSGAGVVLIS 1525

Query: 702  PQGIENDFAVRLEFKLSNNEAEYEAFIRGMQMAIEMGAVRMVIYMDSQLVHKQVMGEFEV 881
            P G    +A++L F  +NN AEYE  + G+++A  +G  R+++  DSQLV  QV  E++ 
Sbjct: 1526 PTGEHIKYAIQLNFPATNNVAEYEGLLAGLRVARSLGIRRLLVKGDSQLVANQVGKEYQC 1585

Query: 882  REERMKRYVEAYRALEGRVKEIKICQVPREENGRADFLAKLASS 1013
               +M  Y+   R LE      +I  +PR+EN   D LA++AS+
Sbjct: 1586 SSTKMSSYLAEVRKLEKHFFGFQIQHIPRKENFLVDQLARMAST 1629


>gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981311|gb|AAT07629.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1459

 Score =  289 bits (740), Expect = 2e-75
 Identities = 154/378 (40%), Positives = 230/378 (60%), Gaps = 5/378 (1%)
 Frame = +3

Query: 3    KVRAIREMAPPRDAKDVQCLTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKA 182
            K+ AI++M PP++ +++Q LTGR+A+L+RF+S+ AER LPFFK LR    F W+EECQKA
Sbjct: 680  KIAAIQQMEPPKNTREMQRLTGRMASLSRFLSKSAERGLPFFKTLRAVNNFKWNEECQKA 739

Query: 183  FEDLKNYLADLSLLTKPLPGEPLYLYLSVGEQGVSTVLIREERSVQRPVYYVSKVLRNAE 362
            F+DLK+YL ++  L+ P  GEPL LY++     VS VL++E+ + Q PVY+VS+ L+  +
Sbjct: 740  FDDLKDYLHNMPTLSSPQKGEPLLLYVAATPVTVSAVLVQEQGNKQMPVYFVSEALQGPK 799

Query: 363  LRYAEIEKAGLALVVTARRLRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSEY 542
             RY E+EK   A+V+ +R+LR YFLSH + + +  P+  V+S  E+AGR+ KWA+EL  +
Sbjct: 800  TRYIEVEKMIYAIVMASRKLRHYFLSHDITIPSTYPIGEVLSNKEIAGRIAKWAMELLPF 859

Query: 543  DIGFENRSAIKAQALADFVQEST-----RDDSSEGAWVIYVDGSVGSSGCGAGIVLISPQ 707
            D+ + +R+AIK+Q LA FV E T     + +  E  W ++ DG+  ++G GA  V+ +P 
Sbjct: 860  DLKYTSRTAIKSQVLAKFVVEWTPTELEKKEEEEKPWTVFSDGACNATGAGAAAVVKTPM 919

Query: 708  GIENDFAVRLEFKLSNNEAEYEAFIRGMQMAIEMGAVRMVIYMDSQLVHKQVMGEFEVRE 887
                 ++ RL F  +NN AEYE  +  M+ +  +GA R++I  DS+LV       FE RE
Sbjct: 920  KQTLKYSARLNFPSTNNTAEYEGVLLAMRKSRALGARRLIIKTDSKLVAGHFSKTFEARE 979

Query: 888  ERMKRYVEAYRALEGRVKEIKICQVPREENGRADFLAKLASSALENQAKHITLLVAKETA 1067
            E M +Y+E  R  E     I +  + REENG AD L K A++    +     +L      
Sbjct: 980  EIMTKYLEEARLNERHFLGITVKAITREENGEADELTKAAAAGQPLENSFFEILEHPSYD 1039

Query: 1068 LGLEVGEIEEKEDWRSAI 1121
                +   EE  DWR  I
Sbjct: 1040 KKEVICIQEEGLDWRDPI 1057


>emb|CAN79562.1| hypothetical protein VITISV_020822 [Vitis vinifera]
          Length = 1027

 Score =  288 bits (736), Expect = 6e-75
 Identities = 155/344 (45%), Positives = 220/344 (63%), Gaps = 7/344 (2%)
 Frame = +3

Query: 3    KVRAIREMAPPRDAKDVQCLTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKA 182
            +++A+ E  PPR+ K++Q LTG+L AL RFI+R  +   PFF  +RKA    W + CQ A
Sbjct: 236  QIKAVMETPPPRNKKELQRLTGKLVALGRFIARFTDELRPFFLAIRKAGAHGWTDSCQNA 295

Query: 183  FEDLKNYLADLSLLTKPLPGEPLYLYLSVGEQGVSTVLIR-EERSVQRPVYYVSKVLRNA 359
            FE +K  L    +L+ P+P E LY+YL V E  +S VL R      Q+P+YYVS+ L + 
Sbjct: 296  FEKIKYCLTQPPILSSPIPKEKLYMYLRVSEWAISAVLFRCPSPKEQKPIYYVSRALADV 355

Query: 360  ELRYAEIEKAGLALVVTARRLRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSE 539
            E RY+++E   LAL   A++LRPYF +H VIV T+ PLRN++ KP++ GR+++WAIELSE
Sbjct: 356  ETRYSKMELTALALRSAAQKLRPYFQAHPVIVLTDQPLRNILYKPDLTGRMLQWAIELSE 415

Query: 540  YDIGFENRSAIKAQALADFVQE-----STRDDSSEGA-WVIYVDGSVGSSGCGAGIVLIS 701
            + I F+ R A+K Q +ADFV E     S  D+SS+   W + VDG+  SSG G G++L S
Sbjct: 416  FGIEFQPRLAMKGQVMADFVLEYFRRPSQHDESSKKEWWTLRVDGASRSSGSGVGLLLQS 475

Query: 702  PQGIENDFAVRLEFKLSNNEAEYEAFIRGMQMAIEMGAVRMVIYMDSQLVHKQVMGEFEV 881
            P G   + A+RL F  SNNEAEYEA + G+ +A+ +   ++ IY DSQLV K V  E+E 
Sbjct: 476  PIGEHLEQAIRLGFSASNNEAEYEAILSGLDLALALSVSKLRIYSDSQLVVKHVQEEYEA 535

Query: 882  REERMKRYVEAYRALEGRVKEIKICQVPREENGRADFLAKLASS 1013
            ++ RM RY+   R    +  E  I ++ R +N RAD LA +A+S
Sbjct: 536  KDARMVRYLAKVRNTLQQFTEWAIEKIKRADNRRADALAGIAAS 579


>dbj|BAD18986.1| GAG-POL precursor [Vitis vinifera] gi|109659801|dbj|BAE96746.1|
            GAG-POL precursor [Vitis vinifera]
            gi|109659805|dbj|BAE96749.1| GAG-POL precursor [Vitis
            vinifera] gi|221271542|dbj|BAH15077.1| GAG-POL precursor
            [Vitis vinifera]
          Length = 1027

 Score =  287 bits (735), Expect = 7e-75
 Identities = 153/344 (44%), Positives = 221/344 (64%), Gaps = 7/344 (2%)
 Frame = +3

Query: 3    KVRAIREMAPPRDAKDVQCLTGRLAALNRFISRLAERSLPFFKVLRKAKKFVWDEECQKA 182
            +V+A+ E  PPR+ K++Q LTG+L AL RFI+R  +   PFF  +RKA    W + CQ A
Sbjct: 236  QVKAVMETPPPRNKKELQRLTGKLVALGRFIARFIDELRPFFLAIRKAGTHGWTDNCQNA 295

Query: 183  FEDLKNYLADLSLLTKPLPGEPLYLYLSVGEQGVSTVLIR-EERSVQRPVYYVSKVLRNA 359
             E +K+YL    +L+ P+P E LY+YL+V E  +S VL R      Q+P+YYVS+ L + 
Sbjct: 296  LERIKHYLMQPPILSSPIPKEKLYMYLAVSEWAISAVLFRCPSPKEQKPIYYVSRALADV 355

Query: 360  ELRYAEIEKAGLALVVTARRLRPYFLSHKVIVRTNLPLRNVMSKPEVAGRLVKWAIELSE 539
            E RY+++E   LAL   A++LRPYF +H VIV T+ PLRN++ KP++ GR+++WAIELSE
Sbjct: 356  ETRYSKMELISLALRSAAQKLRPYFQAHPVIVLTDQPLRNILHKPDLTGRMLQWAIELSE 415

Query: 540  YDIGFENRSAIKAQALADFVQE-STRDDSSEGA-----WVIYVDGSVGSSGCGAGIVLIS 701
            + I F+ R ++K Q +ADFV E S +    EG+     W + VDG+  SSG G G++L S
Sbjct: 416  FGIEFQPRLSMKGQVMADFVLEYSRKPGQHEGSRKKEWWTLRVDGASRSSGSGVGLLLQS 475

Query: 702  PQGIENDFAVRLEFKLSNNEAEYEAFIRGMQMAIEMGAVRMVIYMDSQLVHKQVMGEFEV 881
            P G   + A+RL F  SNNEAEYEA + G+ +A+ +   ++ I+ DSQLV K V  E+E 
Sbjct: 476  PTGEHLEQAIRLGFSASNNEAEYEAILSGLDLALALSVSKLRIFSDSQLVVKHVQEEYEA 535

Query: 882  REERMKRYVEAYRALEGRVKEIKICQVPREENGRADFLAKLASS 1013
            ++ RM RY+   R    +  E  I ++ R +N RAD LA +A+S
Sbjct: 536  KDARMARYLAKVRNTLQQFTEWTIEKIKRADNRRADALAGIAAS 579