BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00007891
         (1415 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607...   148   6e-33
ref|XP_006492207.1| PREDICTED: uncharacterized protein LOC102617...   147   8e-33
ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614...   147   8e-33
ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608...   145   5e-32
ref|XP_006480303.1| PREDICTED: uncharacterized protein LOC102610...   144   1e-31
ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626...   142   3e-31
ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623...   139   4e-30
ref|XP_006481408.1| PREDICTED: uncharacterized protein LOC102613...   139   4e-30
ref|XP_006494926.1| PREDICTED: uncharacterized protein LOC102618...   135   4e-29
gb|EXB29434.1| hypothetical protein L484_022105 [Morus notabilis]     135   5e-29
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...   130   2e-27
gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subc...   128   5e-27
gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group...   128   7e-27
gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subc...   127   9e-27
ref|XP_006828672.1| hypothetical protein AMTR_s04653p00000520, p...   127   1e-26
ref|XP_006484870.1| PREDICTED: uncharacterized protein LOC102608...   122   4e-25
gb|ABA96677.1| retrotransposon protein, putative, Ty3-gypsy subc...   117   9e-24
gb|AAO23086.1| putative gag-pol precursor [Oryza sativa Japonica...   117   1e-23
ref|NP_001050456.1| Os03g0439900 [Oryza sativa Japonica Group] g...   117   1e-23
gb|ABF96839.1| retrotransposon protein, putative, Ty3-gypsy subc...   117   1e-23

>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
          Length = 1866

 Score =  148 bits (373), Expect = 6e-33
 Identities = 91/236 (38%), Positives = 135/236 (57%), Gaps = 13/236 (5%)
 Frame = +1

Query: 700  IQMIVGGPA-EGDSRRARKNYVRAAAPDR-------VQEQLKVEQVGQGPNIHFGPEDCR 855
            +++I GGP   GDS RARKNY R A   +         ++ KV QV     I +   D  
Sbjct: 564  VRVIAGGPTLAGDSNRARKNYGRYALTSKEVLFNLPAAKRAKVRQVP----IMWTENDEE 619

Query: 856  GIVTPHSDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDLQ-VGLETVDTALVGF 1032
            GI+ PH DALVI A +++ +++R+ VDTGSS DILF      M +  + LE  +T+L GF
Sbjct: 620  GILYPHEDALVIKALVASTELRRILVDTGSSVDILFKSALDDMGISDLKLERTNTSLKGF 679

Query: 1033 AGGMIQPIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVSVYHL 1212
             GG + P+G+I LP+++G +P  +T M+ F++VE  S Y ++LGRP +   Q V+S ++L
Sbjct: 680  GGGRLTPMGVIELPITVGTKPFERTMMLDFVVVEERSPYQMILGRPFMRISQCVISTHYL 739

Query: 1213 KMKFLVGEKVGEVDGDQYMARKLYV----ESIQKAERGSIG*S*TPRSVPLGSGRE 1368
             +K+ +   VG V GDQ MAR  Y     E++Q     + G S   R  P+   +E
Sbjct: 740  ALKYRINGVVGVVKGDQRMARSCYATAAKETLQVTSLDNRGDSKNGRQEPVEKLKE 795



 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 25/32 (78%), Positives = 30/32 (93%)
 Frame = +3

Query: 1317 YRMKLNPKKCAFGVRSGKFLGYMVTEKGIEAN 1412
            Y+MKLNP+KCAFGV SGKFLGY+V+ +GIEAN
Sbjct: 1040 YKMKLNPEKCAFGVSSGKFLGYLVSHRGIEAN 1071


>ref|XP_006492207.1| PREDICTED: uncharacterized protein LOC102617447 [Citrus sinensis]
          Length = 1100

 Score =  147 bits (372), Expect = 8e-33
 Identities = 94/253 (37%), Positives = 137/253 (54%), Gaps = 32/253 (12%)
 Frame = +1

Query: 700  IQMIVGGPA-EGDSRRARKNYVRAAAPDR-------VQEQLKVEQVGQGPNIHFGPEDCR 855
            I++IVGGP   GDS RARKNY R A   +         E+ K+ QV     I +  +D  
Sbjct: 263  IRVIVGGPTVAGDSNRARKNYGRYAMTSKEVLFNLPAAEKAKMRQVP----IMWTDDDEE 318

Query: 856  GIVTPHSDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDL-QVGLETVDTALVGF 1032
            GI+ PH DALVI A ++  +++R+ ++ GSS DI+F      M +  + LE  +T+L GF
Sbjct: 319  GILYPHEDALVIKAMVAGTELRRILIEMGSSVDIVFKSTLDDMGIADLKLERTNTSLKGF 378

Query: 1033 AGGMIQPIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVSVYHL 1212
             GG + PIG+I LP+++G +P  +T M+ F++VE  S Y ++LGRP +   Q VVS ++L
Sbjct: 379  GGGRLTPIGIIELPITVGTKPFERTMMLDFVVVEERSPYEIILGRPFMRISQCVVSTHYL 438

Query: 1213 KMKFLVGEKVGEVDGDQYMARKLYV-----------------------ESIQKAERGSIG 1323
             +K+ V   VG V GDQ MAR  Y                        E ++K E  ++ 
Sbjct: 439  PLKYRVNGVVGVVKGDQRMARSCYATAAKETLQVTSLDNRGDSKKGRQEPVEKLEEVAVS 498

Query: 1324 *S*TPRSVPLGSG 1362
             S   R V +GSG
Sbjct: 499  KSNPSRVVKIGSG 511


>ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614166 [Citrus sinensis]
          Length = 1089

 Score =  147 bits (372), Expect = 8e-33
 Identities = 92/228 (40%), Positives = 133/228 (58%), Gaps = 10/228 (4%)
 Frame = +1

Query: 700  IQMIVGGPA-EGDSRRARKNYVRAAAPDRVQ----EQLKVEQVGQGPNIHFGPEDCRGIV 864
            I++I GGP   GDS RARKNY R A   R         K  +V Q P I +  +D  GI+
Sbjct: 397  IRVIAGGPTLAGDSNRARKNYGRYAMTGREVLLNLPAAKKARVRQVP-IMWTEDDEEGIL 455

Query: 865  TPHSDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDLQ-VGLETVDTALVGFAGG 1041
             PH DALVI A +++ +++R+ VDTGSS DILF      M +  + LE  +T+L GF GG
Sbjct: 456  YPHEDALVIKALVASTELRRILVDTGSSVDILFKSALDDMGISDLKLERTNTSLKGFGGG 515

Query: 1042 MIQPIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVSVYHLKMK 1221
             + P+G+I LP+++G +P  +T M+ F++VE  S Y ++LGRP +   Q V+S ++L +K
Sbjct: 516  RLTPMGVIELPITVGTKPFERTMMLDFVVVEERSPYQMILGRPFMRISQCVMSTHYLALK 575

Query: 1222 FLVGEKVGEVDGDQYMARKLYV----ESIQKAERGSIG*S*TPRSVPL 1353
            + +   VG V GDQ MAR  Y     E++Q     + G S   R  P+
Sbjct: 576  YRINGVVGVVKGDQRMARSCYATAAKETLQVTSLDNRGDSKNGRQEPV 623



 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = +3

Query: 1314 EYRMKLNPKKCAFGVRSGKFLGYMVTEKGIEANP 1415
            +Y MKLNP+KCAFGV SGKFLGY+V+ +GIEANP
Sbjct: 872  KYEMKLNPEKCAFGVGSGKFLGYLVSHRGIEANP 905


>ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608416 [Citrus sinensis]
          Length = 1313

 Score =  145 bits (365), Expect = 5e-32
 Identities = 90/231 (38%), Positives = 133/231 (57%), Gaps = 13/231 (5%)
 Frame = +1

Query: 700  IQMIVGGPA-EGDSRRARKNYVRAAAPDR-------VQEQLKVEQVGQGPNIHFGPEDCR 855
            IQ+I G P   GDS RARKNY R A   +         ++ KV QV     I +  ++  
Sbjct: 409  IQVIAGRPTLAGDSNRARKNYGRYALTSKEVLFNLPAAKRAKVRQVP----IMWTEDEEE 464

Query: 856  GIVTPHSDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDLQ-VGLETVDTALVGF 1032
            GI+ PH DALVI A +++ +++R+ VDTGSS DILF      M +  + LE  +T+L GF
Sbjct: 465  GILYPHEDALVIKALVASTELRRILVDTGSSVDILFKSALDDMGISDLKLERTNTSLKGF 524

Query: 1033 AGGMIQPIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVSVYHL 1212
             GG + P+G+I LP+++G +P  +T M+ F++VE  S Y ++LGRP +   Q V+S ++L
Sbjct: 525  GGGRLTPMGVIELPITVGTKPFERTMMLDFVVVEERSPYQMILGRPFMRISQCVMSTHYL 584

Query: 1213 KMKFLVGEKVGEVDGDQYMARKLYV----ESIQKAERGSIG*S*TPRSVPL 1353
             +K+ +   VG V GDQ MAR  Y     E++Q     + G S   R  P+
Sbjct: 585  ALKYRINGVVGVVKGDQRMARSCYATAAKETLQVTSLDNRGDSKNGRQEPV 635


>ref|XP_006480303.1| PREDICTED: uncharacterized protein LOC102610907 [Citrus sinensis]
          Length = 1231

 Score =  144 bits (362), Expect = 1e-31
 Identities = 81/211 (38%), Positives = 127/211 (60%), Gaps = 9/211 (4%)
 Frame = +1

Query: 700  IQMIVGGPA-EGDSRRARKNYVRAAAPDR-------VQEQLKVEQVGQGPNIHFGPEDCR 855
            I++I GGP   GDS R+RKNY R A   +       V ++ +V QV     I +  ED  
Sbjct: 22   IRVIAGGPTLAGDSNRSRKNYARYAMTSKELFFNTPVAKRARVRQVP----IIWTDEDKE 77

Query: 856  GIVTPHSDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDL-QVGLETVDTALVGF 1032
            GI+ PH DALVI AT+++    R+ +DTGSS D+LF     +M +  + LE  +T+L GF
Sbjct: 78   GILYPHEDALVIKATVASKKFDRILIDTGSSVDVLFKSTLEEMGIADLKLEYTNTSLKGF 137

Query: 1033 AGGMIQPIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVSVYHL 1212
             GG + P+G++ LP+++G  P ++T ++ F++V+    Y ++LGRP     +AV+S ++L
Sbjct: 138  GGGKLVPLGVVELPITIGSSPKKRTMILDFVMVDEEGPYQMILGRPFPRMSKAVLSNHYL 197

Query: 1213 KMKFLVGEKVGEVDGDQYMARKLYVESIQKA 1305
             +K+ V   VG V GDQ +AR  Y  + ++A
Sbjct: 198  ALKYQVNGVVGVVQGDQRIARSYYSSAAREA 228


>ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626228 [Citrus sinensis]
          Length = 1189

 Score =  142 bits (359), Expect = 3e-31
 Identities = 81/208 (38%), Positives = 125/208 (60%), Gaps = 6/208 (2%)
 Frame = +1

Query: 700  IQMIVGGPA-EGDSRRARKNYVRAAAPDRV----QEQLKVEQVGQGPNIHFGPEDCRGIV 864
            ++MI GGP   GDS R+RKNY R A   +         K  +V Q P I +  ED  GI+
Sbjct: 499  VRMIAGGPTLAGDSNRSRKNYARYAMTSKEVLFSTPAAKRARVRQVP-IMWTDEDEEGIL 557

Query: 865  TPHSDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDL-QVGLETVDTALVGFAGG 1041
             PH DALVI AT+++ +  R+ +DTGSS D+LF     +M +    LE  +T+L GF GG
Sbjct: 558  YPHEDALVIKATVASKEFDRILIDTGSSVDVLFKSTLEEMGIADRKLEYTNTSLKGFGGG 617

Query: 1042 MIQPIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVSVYHLKMK 1221
             + P+G++ LP+++G  P  +T ++ F++V+    Y ++LGRP L   +AV+S ++L +K
Sbjct: 618  KLVPLGVVELPITIGSSPTERTMILDFVVVDEEGPYQMILGRPFLRMSKAVLSNHYLALK 677

Query: 1222 FLVGEKVGEVDGDQYMARKLYVESIQKA 1305
            + V   VG V G Q +AR  Y  ++++A
Sbjct: 678  YRVNGIVGVVRGGQRIARGCYSSAVREA 705



 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 26/34 (76%), Positives = 32/34 (94%)
 Frame = +3

Query: 1314 EYRMKLNPKKCAFGVRSGKFLGYMVTEKGIEANP 1415
            +Y+MKLNP+KCAFGV SGKFLG+MV+ +GIEANP
Sbjct: 974  KYKMKLNPEKCAFGVESGKFLGFMVSHRGIEANP 1007


>ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623105 [Citrus sinensis]
          Length = 1407

 Score =  139 bits (349), Expect = 4e-30
 Identities = 81/208 (38%), Positives = 123/208 (59%), Gaps = 6/208 (2%)
 Frame = +1

Query: 700  IQMIVGGPA-EGDSRRARKNYVRAAAPDRV----QEQLKVEQVGQGPNIHFGPEDCRGIV 864
            +++I GGP   GDS R+RKNY R A   +         K  +V Q P I +  ED  GI+
Sbjct: 608  VRVIAGGPTLAGDSNRSRKNYARYAMTSKEILFNTPAAKRARVRQVP-IMWTDEDEEGIL 666

Query: 865  TPHSDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDL-QVGLETVDTALVGFAGG 1041
             PH DALVI AT+++    R+ VDT SS D+LF     +M +    LE  +T+L GF GG
Sbjct: 667  YPHEDALVIEATVASKKFDRILVDTWSSVDVLFKSTLEEMGIADRKLEYTNTSLKGFGGG 726

Query: 1042 MIQPIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVSVYHLKMK 1221
             + P+G++ LP+++G  P  +T ++ F++V+    Y ++LGRP L   +AV+S ++L +K
Sbjct: 727  KLVPLGVVKLPITVGSPPTERTMILDFVVVDEEGPYQMILGRPFLRMSKAVLSNHYLALK 786

Query: 1222 FLVGEKVGEVDGDQYMARKLYVESIQKA 1305
            + V   VG V GDQ +AR  Y  + ++A
Sbjct: 787  YRVNGVVGVVRGDQRIARSCYSSAAREA 814



 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 26/34 (76%), Positives = 32/34 (94%)
 Frame = +3

Query: 1314 EYRMKLNPKKCAFGVRSGKFLGYMVTEKGIEANP 1415
            +Y+MKLNP+KCAFGV SGKFLG+MV+ +GIEANP
Sbjct: 1052 KYKMKLNPEKCAFGVESGKFLGFMVSHRGIEANP 1085


>ref|XP_006481408.1| PREDICTED: uncharacterized protein LOC102613464 [Citrus sinensis]
          Length = 364

 Score =  139 bits (349), Expect = 4e-30
 Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 9/211 (4%)
 Frame = +1

Query: 700  IQMIVGGPA-EGDSRRARKNYVRAAAPDR-------VQEQLKVEQVGQGPNIHFGPEDCR 855
            ++MI GG    GDS R+RKNY R A   +         ++++V QV     I +  ED  
Sbjct: 121  VRMIAGGLILAGDSNRSRKNYARYAMTSKEVFFNTPAAKRVRVRQVP----IMWTDEDEE 176

Query: 856  GIVTPHSDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDL-QVGLETVDTALVGF 1032
             I+ PH DALVI AT+++    R+ VDTGSS D+LF     ++ +    LE  +T+L GF
Sbjct: 177  RILYPHEDALVIEATVASKKFDRILVDTGSSVDVLFKSTLEEIGIADRKLEYTNTSLKGF 236

Query: 1033 AGGMIQPIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVSVYHL 1212
             GG + P+GM+ LP+++G  P  +T M+ F++V+  S Y ++LG+P L   +AV+S ++L
Sbjct: 237  GGGKLIPLGMVELPITIGSSPTERTMMLDFVVVDEESPYQMILGQPFLRMSKAVLSNHYL 296

Query: 1213 KMKFLVGEKVGEVDGDQYMARKLYVESIQKA 1305
             +K+ V   VG V GDQ +AR  Y  + ++A
Sbjct: 297  ALKYQVNGVVGVVRGDQRIARSCYSSAAREA 327


>ref|XP_006494926.1| PREDICTED: uncharacterized protein LOC102618417 [Citrus sinensis]
          Length = 776

 Score =  135 bits (340), Expect = 4e-29
 Identities = 78/208 (37%), Positives = 123/208 (59%), Gaps = 6/208 (2%)
 Frame = +1

Query: 700  IQMIVGGPA-EGDSRRARKNYVRAAAPDRV----QEQLKVEQVGQGPNIHFGPEDCRGIV 864
            +++I GGP   G S R+RKNY R A   +         K  +V + P I +  ED + ++
Sbjct: 425  VRVIAGGPTLAGGSNRSRKNYARYAMTSKEILFNTPAAKRARVRRVP-IMWTDEDKKWVL 483

Query: 865  TPHSDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDL-QVGLETVDTALVGFAGG 1041
             PH DALVI AT+++    R+ +DTGSS D+LF     +M +    LE  +T+L GF GG
Sbjct: 484  YPHEDALVIKATVASKKFDRILIDTGSSVDVLFKSTLEEMGIADRKLEYTNTSLKGFGGG 543

Query: 1042 MIQPIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVSVYHLKMK 1221
             + P+G++ LP+++G  P  +T M+ F++V+    Y ++LGRP L   +AV+S ++L +K
Sbjct: 544  KLVPLGVVELPITIGSSPTERTIMLDFVVVDEEGPYQMILGRPFLRMSKAVLSNHYLALK 603

Query: 1222 FLVGEKVGEVDGDQYMARKLYVESIQKA 1305
            + V   VG V GDQ +AR  Y  + ++A
Sbjct: 604  YWVNGVVGVVRGDQRIARSCYSLAAREA 631


>gb|EXB29434.1| hypothetical protein L484_022105 [Morus notabilis]
          Length = 363

 Score =  135 bits (339), Expect = 5e-29
 Identities = 76/208 (36%), Positives = 118/208 (56%), Gaps = 7/208 (3%)
 Frame = +1

Query: 697  VIQMIVGGP-AEGDSRRARKNYV---RAAAPDRVQEQLKVEQVGQ--GPNIHFGPEDCRG 858
            +I+ +  GP   GDSRR++K+Y    R   P R    L   ++ +    ++ F  ED  G
Sbjct: 132  IIRTVPDGPYVRGDSRRSQKDYAYEARRVYPKRFWN-LSTAKITKYISVDVTFNEEDVNG 190

Query: 859  IVTPHSDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDL-QVGLETVDTALVGFA 1035
            +   H+DALV+ A I N+ V R+ VD GSS  +L+ DC  K+ + +  LE     L GF 
Sbjct: 191  VHFSHNDALVVEAIIGNHTVCRILVDNGSSVGLLYADCLEKIGVPKEQLEKTSRPLYGFI 250

Query: 1036 GGMIQPIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVSVYHLK 1215
            G  + P G I LP++ G++P   T M  F++++  S YN ++GR TL A +A+ S+YH K
Sbjct: 251  GDSVIPQGTIRLPINAGEKPRHATTMANFVVIKGVSQYNAVIGRLTLQALRAITSIYHQK 310

Query: 1216 MKFLVGEKVGEVDGDQYMARKLYVESIQ 1299
            +KF     VGE+  +QY AR  Y ++++
Sbjct: 311  VKFSTPNDVGEMKSNQYEARVAYSDALR 338


>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score =  130 bits (326), Expect = 2e-27
 Identities = 81/196 (41%), Positives = 109/196 (55%), Gaps = 2/196 (1%)
 Frame = +1

Query: 697  VIQMIVGGPAEG-DSRRARKNYVRAAAPDRVQEQLKVEQVGQGPNIHFGPEDCRGIVTPH 873
            VI  I GG + G +S+R RK YVR         Q K   V     I FGPED  GI+ PH
Sbjct: 693  VINAITGGSSLGVESKRQRKAYVRQVNHVGTIYQSK-PPVYSKTVISFGPEDAEGILFPH 751

Query: 874  SDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDL-QVGLETVDTALVGFAGGMIQ 1050
             D LV++  I+  +VQRV +D GSSAD+LFYD ++KM + +  L      L GF G  + 
Sbjct: 752  QDPLVVSVEIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDRLTNAGVPLQGFGGQQVH 811

Query: 1051 PIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVSVYHLKMKFLV 1230
             IG I+L V  GK  N +   I F +V+ P  YN +LGR T+N F+A++   ++ MK   
Sbjct: 812  AIGKISLQVVFGKGTNVRKEEIVFDVVDMPYQYNAILGRSTINIFEAIIHHNYICMKLPG 871

Query: 1231 GEKVGEVDGDQYMARK 1278
               V  V G+Q +ARK
Sbjct: 872  PRGVITVRGEQLVARK 887


>gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1889

 Score =  128 bits (322), Expect = 5e-27
 Identities = 80/196 (40%), Positives = 107/196 (54%), Gaps = 2/196 (1%)
 Frame = +1

Query: 697  VIQMIVGGPAEG-DSRRARKNYVRAAAPDRVQEQLKVEQVGQGPNIHFGPEDCRGIVTPH 873
            VI  I GG + G +S+R RK YVR         Q     V     I FGPED  GI+ PH
Sbjct: 693  VINAITGGSSLGVESKRQRKAYVRQVNHVGTSYQSN-PPVYSKTVISFGPEDAEGILFPH 751

Query: 874  SDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDL-QVGLETVDTALVGFAGGMIQ 1050
             D LV++  I+  +VQRV +D GSSAD+LFYD ++KM + +  L      L GF G  + 
Sbjct: 752  QDPLVVSVEIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDRLTNAGVPLQGFGGQQVH 811

Query: 1051 PIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVSVYHLKMKFLV 1230
             IG I+L V  GK  N +   I F +V+ P  YN +LGR T+N F+A++   ++ MK   
Sbjct: 812  AIGKISLQVVFGKGTNVRKEEIVFDVVDMPYQYNAILGRSTINIFEAIIHHNYICMKLPG 871

Query: 1231 GEKVGEVDGDQYMARK 1278
               V  V G+Q  ARK
Sbjct: 872  PRGVITVRGEQLAARK 887


>gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981311|gb|AAT07629.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1459

 Score =  128 bits (321), Expect = 7e-27
 Identities = 80/200 (40%), Positives = 109/200 (54%), Gaps = 2/200 (1%)
 Frame = +1

Query: 697  VIQMIVGGPAEG-DSRRARKNYVRAAAPDRVQEQLKVEQVGQGPNIHFGPEDCRGIVTPH 873
            VI  I GG + G +S+R RK YVR         Q  V        I FGPED  GI+ PH
Sbjct: 210  VINAITGGSSLGVESKRQRKAYVRQIHHVGTSYQ-SVPPAYSNTVISFGPEDAEGILFPH 268

Query: 874  SDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDL-QVGLETVDTALVGFAGGMIQ 1050
             D LVI+  I+  +VQRV VD GSSAD+LFYD ++KM + +  L      L GF G  + 
Sbjct: 269  QDPLVISVEIAQCEVQRVLVDGGSSADVLFYDAFKKMQIPEDRLTHAGIPLQGFGGHQVH 328

Query: 1051 PIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVSVYHLKMKFLV 1230
             IG I+L V  G   N++   + F +V+ P  YN +LGR T+N F+A++   ++ MK   
Sbjct: 329  TIGKISLQVVFGGGENKRREEVVFDVVDMPYQYNAVLGRSTINIFEAIIHHNYICMKLPG 388

Query: 1231 GEKVGEVDGDQYMARKLYVE 1290
             + V  V G Q  ARK  ++
Sbjct: 389  PKGVISVRGGQLAARKFELQ 408


>gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 504

 Score =  127 bits (320), Expect = 9e-27
 Identities = 79/200 (39%), Positives = 109/200 (54%), Gaps = 2/200 (1%)
 Frame = +1

Query: 697  VIQMIVGGPAEG-DSRRARKNYVRAAAPDRVQEQLKVEQVGQGPNIHFGPEDCRGIVTPH 873
            VI  I GG + G +S+R RK YVR         Q  +        I FGPED  GI+ PH
Sbjct: 44   VINAITGGSSLGVESKRQRKAYVRQINHVGTSYQ-SIPPAYSNTVISFGPEDAEGILFPH 102

Query: 874  SDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDL-QVGLETVDTALVGFAGGMIQ 1050
             D LVI+  I+  +VQRV VD GSSAD+LFYD ++KM + +  L      L GF G  + 
Sbjct: 103  QDPLVISVEITQCEVQRVLVDGGSSADVLFYDAFKKMQIPEDRLTHAGIPLQGFGGQQVH 162

Query: 1051 PIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVSVYHLKMKFLV 1230
             IG I+L V  G   N++   + F +V+ P  YN +LGR T+N F+A++   ++ MK   
Sbjct: 163  AIGKISLQVVFGGGENKRREEVVFDVVDMPYQYNAILGRSTINIFEAIIHHNYICMKLPG 222

Query: 1231 GEKVGEVDGDQYMARKLYVE 1290
             + V  V G Q  ARK  ++
Sbjct: 223  PKGVISVRGGQLAARKFELQ 242


>ref|XP_006828672.1| hypothetical protein AMTR_s04653p00000520, partial [Amborella
            trichopoda] gi|548833479|gb|ERM96088.1| hypothetical
            protein AMTR_s04653p00000520, partial [Amborella
            trichopoda]
          Length = 563

 Score =  127 bits (319), Expect = 1e-26
 Identities = 81/219 (36%), Positives = 119/219 (54%), Gaps = 11/219 (5%)
 Frame = +1

Query: 700  IQMIVGGP-AEGDSRRARKNYVRAAAPDRVQEQLKVEQVGQGP---------NIHFGPED 849
            I  I+GGP   GDSR++++ Y R A   + +    V  +G+ P         +I F   D
Sbjct: 207  ILTIIGGPHIAGDSRKSQERYAREA---KEKPLTNVNNLGERPEKLFKRECEDIVFMESD 263

Query: 850  CRGIVTPHSDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDLQV-GLETVDTALV 1026
             R +  PHSDALVI A I   +V R+ VD GSS ++L +  +++M LQ   L  + +++ 
Sbjct: 264  ARWVHHPHSDALVIVANIGGDNVHRILVDNGSSVNLLNFQAFKQMGLQEKDLRPMTSSIY 323

Query: 1027 GFAGGMIQPIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVSVY 1206
            GF G +I   GMI LP++LG  P     M  F +++  S+YN ++GRP L   + V S+Y
Sbjct: 324  GFTGDVIAIKGMIKLPITLGTAPITAKSMADFAVIDQYSAYNAVIGRPILKEMKIVTSIY 383

Query: 1207 HLKMKFLVGEKVGEVDGDQYMARKLYVESIQKAERGSIG 1323
            HL MKF     VG V G Q  +R+ Y  ++ KA R   G
Sbjct: 384  HLTMKFPTPSGVGSVRGVQSDSRECYNAAV-KARRKKDG 421



 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 34/90 (37%), Positives = 47/90 (52%)
 Frame = +3

Query: 291 PQKKPRSEAMGGRPRFEKYTPLAVPQGEVLIAIERHPDLRWPKAHAEAPVKAKCKEFCRF 470
           P KK  S    G PRF  YT LAVP+  +    ER+   + P        +   K+FC++
Sbjct: 90  PPKKESSPKRKGGPRFVNYTELAVPRDHIYAVEERNGVFKKPPPIRGNRDRRDPKKFCKY 149

Query: 471 HNEYGHTTDRCTHLRDEIERLIQAGHLREF 560
           H + GHTT  C  L+DEIE LI+ G   ++
Sbjct: 150 HKDIGHTTLECWVLQDEIEELIRRGKFDKY 179


>ref|XP_006484870.1| PREDICTED: uncharacterized protein LOC102608935, partial [Citrus
            sinensis]
          Length = 301

 Score =  122 bits (306), Expect = 4e-25
 Identities = 60/155 (38%), Positives = 99/155 (63%), Gaps = 1/155 (0%)
 Frame = +1

Query: 844  EDCRGIVTPHSDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDL-QVGLETVDTA 1020
            +D  GI+ PH DALVI AT+++    R+ ++TGSS D+LF     +M +    LE ++T+
Sbjct: 5    DDEEGILYPHEDALVIKATVASKKFDRILINTGSSVDVLFKSTLEEMGIADRKLEYINTS 64

Query: 1021 LVGFAGGMIQPIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVS 1200
            L GF GG + P+G++ LP+++G  P  +T ++ F++V+    Y ++LGRP L   +AV+S
Sbjct: 65   LKGFGGGKLVPLGVVELPITIGSSPTERTMILDFVVVDEEGPYQMILGRPFLRMSKAVLS 124

Query: 1201 VYHLKMKFLVGEKVGEVDGDQYMARKLYVESIQKA 1305
             ++L +K+ V   VG V GDQ +AR  Y  + ++A
Sbjct: 125  NHYLALKYRVNGVVGVVRGDQRIARSCYSSAAREA 159


>gb|ABA96677.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1412

 Score =  117 bits (294), Expect = 9e-24
 Identities = 59/145 (40%), Positives = 89/145 (61%), Gaps = 1/145 (0%)
 Frame = +1

Query: 790  EQLKVEQVGQGPNIHFGPEDCRGIVTPHSDALVITATISNYDVQRVFVDTGSSADILFYD 969
            EQ   E     P I FGPED  G++ PH + LVI+A ++ ++V+++ VD GSSA+++F +
Sbjct: 228  EQGNQESSNPTPQISFGPEDAEGVLFPHQEPLVISAEVAGFEVRQILVDGGSSANVIFAE 287

Query: 970  CYRKMDL-QVGLETVDTALVGFAGGMIQPIGMITLPVSLGKEPNRKTRMIRFLIVEAPSS 1146
             Y KM L  + L    T+L GF G  +Q +G + L V+ G + NR+   I F IV+ P +
Sbjct: 288  AYAKMGLPTLALTQAPTSLRGFGGEAVQVLGQVQLAVAFGTDENRREEQILFDIVDIPYN 347

Query: 1147 YNVMLGRPTLNAFQAVVSVYHLKMK 1221
            YN + GR TLN F+A+    +LK+K
Sbjct: 348  YNAIFGRATLNKFEAISHHNYLKLK 372


>gb|AAO23086.1| putative gag-pol precursor [Oryza sativa Japonica Group]
          Length = 971

 Score =  117 bits (293), Expect = 1e-23
 Identities = 67/177 (37%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
 Frame = +1

Query: 697  VIQMIVGGPAEGD-SRRARKNYVRAAAPDRVQEQLKVEQVGQGPNIHFGPEDCRGIVTPH 873
            VIQ+I      G  S+R +K ++RA        +   + V Q   I FGPED  G++ PH
Sbjct: 672  VIQVITRADPPGQLSKRQKKMHIRAVHSITSAGKRAPQYVNQ--LISFGPEDAEGVMFPH 729

Query: 874  SDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDLQV-GLETVDTALVGFAGGMIQ 1050
             D LVI+A I+ ++V R+ VD GSSAD++F + Y KM L    L     ++ GF G  +Q
Sbjct: 730  QDPLVISAEIAGFEVWRILVDGGSSADVIFVEAYAKMGLPTQALTPAPASIRGFGGEAVQ 789

Query: 1051 PIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVSVYHLKMK 1221
             +G   L ++ G   NR+   + F +V+ P +YN +LGR TLN F+A+    +LK+K
Sbjct: 790  VLGQALLLIAFGSGENRREEQVLFDVVDIPYNYNAILGRATLNKFEAISHHNYLKLK 846


>ref|NP_001050456.1| Os03g0439900 [Oryza sativa Japonica Group]
            gi|113548927|dbj|BAF12370.1| Os03g0439900, partial [Oryza
            sativa Japonica Group]
          Length = 420

 Score =  117 bits (293), Expect = 1e-23
 Identities = 67/177 (37%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
 Frame = +1

Query: 697  VIQMIVGGPAEGD-SRRARKNYVRAAAPDRVQEQLKVEQVGQGPNIHFGPEDCRGIVTPH 873
            VIQ+I      G  S+R +K ++RA        +   + V Q   I FGPED  G++ PH
Sbjct: 121  VIQVITRADPPGQLSKRQKKMHIRAVHSITSAGKRAPQYVNQ--LISFGPEDAEGVMFPH 178

Query: 874  SDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDLQV-GLETVDTALVGFAGGMIQ 1050
             D LVI+A I+ ++V R+ VD GSSAD++F + Y KM L    L     ++ GF G  +Q
Sbjct: 179  QDPLVISAEIAGFEVWRILVDGGSSADVIFVEAYAKMGLPTQALTPAPASIRGFGGEAVQ 238

Query: 1051 PIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVSVYHLKMK 1221
             +G   L ++ G   NR+   + F +V+ P +YN +LGR TLN F+A+    +LK+K
Sbjct: 239  VLGQALLLIAFGSGENRREEQVLFDVVDIPYNYNAILGRATLNKFEAISHHNYLKLK 295


>gb|ABF96839.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
            [Oryza sativa Japonica Group]
          Length = 406

 Score =  117 bits (293), Expect = 1e-23
 Identities = 67/177 (37%), Positives = 100/177 (56%), Gaps = 2/177 (1%)
 Frame = +1

Query: 697  VIQMIVGGPAEGD-SRRARKNYVRAAAPDRVQEQLKVEQVGQGPNIHFGPEDCRGIVTPH 873
            VIQ+I      G  S+R +K ++RA        +   + V Q   I FGPED  G++ PH
Sbjct: 107  VIQVITRADPPGQLSKRQKKMHIRAVHSITSAGKRAPQYVNQ--LISFGPEDAEGVMFPH 164

Query: 874  SDALVITATISNYDVQRVFVDTGSSADILFYDCYRKMDLQV-GLETVDTALVGFAGGMIQ 1050
             D LVI+A I+ ++V R+ VD GSSAD++F + Y KM L    L     ++ GF G  +Q
Sbjct: 165  QDPLVISAEIAGFEVWRILVDGGSSADVIFVEAYAKMGLPTQALTPAPASIRGFGGEAVQ 224

Query: 1051 PIGMITLPVSLGKEPNRKTRMIRFLIVEAPSSYNVMLGRPTLNAFQAVVSVYHLKMK 1221
             +G   L ++ G   NR+   + F +V+ P +YN +LGR TLN F+A+    +LK+K
Sbjct: 225  VLGQALLLIAFGSGENRREEQVLFDVVDIPYNYNAILGRATLNKFEAISHHNYLKLK 281