BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00007275
         (3215 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron sp...  1000   0.0  
ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron sp...   992   0.0  
gb|EMJ28219.1| hypothetical protein PRUPE_ppa001134mg [Prunus pe...   982   0.0  
gb|EOY05900.1| CRM family member 3A isoform 1 [Theobroma cacao]       972   0.0  
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...   972   0.0  
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]   969   0.0  
ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Popu...   957   0.0  
ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron sp...   946   0.0  
ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citr...   941   0.0  
gb|EOY05902.1| CRM family member 3A isoform 3 [Theobroma cacao]       939   0.0  
ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron sp...   932   0.0  
ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citr...   917   0.0  
gb|EPS65975.1| hypothetical protein M569_08800, partial [Genlise...   914   0.0  
ref|XP_002517017.1| conserved hypothetical protein [Ricinus comm...   905   0.0  
ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron sp...   902   0.0  
ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron sp...   886   0.0  
gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitat...   884   0.0  
ref|XP_003590782.1| Chloroplastic group IIA intron splicing faci...   879   0.0  
ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron sp...   862   0.0  
ref|XP_002883397.1| hypothetical protein ARALYDRAFT_898801 [Arab...   861   0.0  

>ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 883

 Score = 1000 bits (2585), Expect = 0.0
 Identities = 533/890 (59%), Positives = 637/890 (71%), Gaps = 13/890 (1%)
 Frame = +1

Query: 235  MAVMPSYQFHPRNT---FLMDSFQSSVSKLHVRTALQLFRYSSSFSTN----KQFLCAIH 393
            MA++PS+QF+PR T   FL  S      K +      +      F  N      F+   H
Sbjct: 1    MALVPSHQFYPRTTRLSFLRYSSSKPFKKPNFHAPHDIVNQDCIFKQNPPKRSNFMITPH 60

Query: 394  HSSNSNFTPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAK 573
               N +    + P KR N + KN +   N  +  PN +  +  T +  +SWL  W  T  
Sbjct: 61   DVVNQDCIFRRTPSKRSNFVVKNSSRRWNLDTISPNLKSRDSGTSVFSSSWLGKWNGTRN 120

Query: 574  PNCGKKPQAVVNYRNL-GDVXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYIDDVSDKNEN 750
                KK Q V+NYRN  GD                    RIVEKLKKFGY D+ ++K + 
Sbjct: 121  DIKLKKAQIVLNYRNSNGDTSGSDCEESISGSTMD----RIVEKLKKFGYADEATEKEKK 176

Query: 751  MSRGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDAR---SNGEVRFPWEKK-APNEQX 918
              R +EKGSIEDIF+VEEG+LPN RGGFSEE PFGD      +G VRFPWE+     E+ 
Sbjct: 177  EKRVVEKGSIEDIFFVEEGILPNVRGGFSEESPFGDENVIAKDGVVRFPWERPLVKKEES 236

Query: 919  XXXXXXXXXXXAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKSCEVV 1098
                       AELTLP SELRRL N ALRIKNK++I GAGVTQQVV+ I EKWK+ EVV
Sbjct: 237  NSMASRSRTHLAELTLPASELRRLTNLALRIKNKSRITGAGVTQQVVETIREKWKTSEVV 296

Query: 1099 RLKVEGAPALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEI 1278
            RLKVEGAPALNM+RMHEILERKTGGLV+WRSGTSV+LYRGV+YE P++++KKRI+R++EI
Sbjct: 297  RLKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSYETPSERMKKRIMRRDEI 356

Query: 1279 SHK-SPSATNKTRQDSSEFGPLAATDTPQAEPVSTDPDNKYPETSSEVRYEDEIEKLLDS 1455
             HK SP    ++ Q+     P    D+ + + V T  +NK  +  SEV YEDE++KLLD 
Sbjct: 357  RHKNSPIVDGESNQN-----PRNDVDSLREDSVDTSEENKNIDRQSEVNYEDEVDKLLDG 411

Query: 1456 LGPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPP 1635
            LGPRY DWPG GPLPVDADLLPG+V GYQPPFR+LPYGVRSTL  +EATALRRLAR LPP
Sbjct: 412  LGPRYTDWPGSGPLPVDADLLPGIVPGYQPPFRILPYGVRSTLAAREATALRRLARVLPP 471

Query: 1636 HFALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNK 1815
            HFALGRSRQHQGLA+ M+KLW+RSSI KIA+KRGVQLTTSERMAED+K+LTGG+LLSRNK
Sbjct: 472  HFALGRSRQHQGLASVMVKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNK 531

Query: 1816 DFLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAEETDESRTAGT 1995
            DFLV+YRGKDFLSP+VAE LLEKERLAK LQDEEE+AR R S L+T      + SRTAGT
Sbjct: 532  DFLVFYRGKDFLSPEVAEALLEKERLAKTLQDEEEKARLRASLLLTAGVTTINSSRTAGT 591

Query: 1996 LRETLDSDTRWGKQLDDDHKEKVMREAEVLRHANLVRKLEKKLDFAEKKLTKAERALSKV 2175
            L ETLD+D RWGK+LDD  KE VMREAE+LRH +LVRKLEKKL FAE+KL KAER LSKV
Sbjct: 592  LGETLDADARWGKRLDDKDKENVMREAELLRHGDLVRKLEKKLAFAERKLMKAERVLSKV 651

Query: 2176 EESLNPADRVEDPESLSDEERFMFRKLGLRMKAXXXXXXXXXXXXTVENMHLHWKYRELV 2355
            EE+LNP DR  +P+SL+DEERFMFRKLGLRMKA            TVENMHLHWKYRELV
Sbjct: 652  EETLNPLDRRAEPDSLTDEERFMFRKLGLRMKAFLLLGRRGIFDGTVENMHLHWKYRELV 711

Query: 2356 KIIVKAQNIEEVKNIALSLEAESGGVLVSVDKISKGYAIIVFRGRDYKRPSLLRPKNLLT 2535
            KI+VKA+N E+V  IAL+LEAESGGVLVSVDK+SKGYAIIVFRG+DY RP  LRPKNLLT
Sbjct: 712  KIMVKAKNFEQVSKIALALEAESGGVLVSVDKVSKGYAIIVFRGKDYSRPPTLRPKNLLT 771

Query: 2536 KRKALARSIELQRHQALLHHISTIETRVNQLRSEIEQMAAVKDQGDEQLYNKLDLAYPTX 2715
            KRKALARSIELQR +ALL HIS ++TRV QL +EIEQ+A++KD  D++LY+KL+ AY + 
Sbjct: 772  KRKALARSIELQRREALLEHISAVQTRVGQLTAEIEQLASLKDSTDDELYDKLNSAYSSE 831

Query: 2716 XXXXXXXXXXTYLETYDSENEMVDGNKDSAPNAYLETNFPYDFQEESETE 2865
                       Y+E +D++N++V+ + DS   ++ E  F Y  Q ESE E
Sbjct: 832  DEDSEEEGDDAYIEVFDNDNDVVNRSDDSDDTSHPEREFQYVHQNESERE 881


>ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 883

 Score =  992 bits (2565), Expect = 0.0
 Identities = 539/907 (59%), Positives = 637/907 (70%), Gaps = 30/907 (3%)
 Frame = +1

Query: 235  MAVMPSYQFHPRNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHH------ 396
            MA++PS+QF+PR T                  L  FRYSSS    K    A H       
Sbjct: 1    MALVPSHQFYPRTT-----------------RLSFFRYSSSKPFKKPNFHAPHDIVNQDC 43

Query: 397  ------SSNSNF--TPH----------KNPHKRFNLLPKNKNSICNYASEPPNSQKSNCA 522
                  S  SNF  TPH          + P KR N + KN +   N  +  PN +  +  
Sbjct: 44   IFKQNPSKRSNFVVTPHDVVNKDCIFKRTPLKRSNFVVKNSSRRWNLDTISPNLKSRDSG 103

Query: 523  TILSHNSWLDNWTITAKPNCGKKPQAVVNYRNL-GDVXXXXXXXXXXXXXXXXXXXRIVE 699
            T +  +SWL  W  T      KK Q V+NYRN  GD                    RIVE
Sbjct: 104  TSVFSSSWLGKWNETRNDIKLKKAQIVLNYRNSNGDTSGSDCEESISGSTMD----RIVE 159

Query: 700  KLKKFGYIDDVSDKNENMSRGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDAR---SN 870
            KLKKFGY D+ ++K +   R +EKGSIEDIF+VEEG+LPN RGGFSEE PFGD      +
Sbjct: 160  KLKKFGYADEATEKEKREKRVVEKGSIEDIFFVEEGILPNVRGGFSEETPFGDENIIAKD 219

Query: 871  GEVRFPWEKK-APNEQXXXXXXXXXXXXAELTLPESELRRLRNFALRIKNKTKIGGAGVT 1047
            G V FPWEK     E+            AELTLP SELRRL N ALRIKNK++I GAGVT
Sbjct: 220  GVVGFPWEKPLVKKEESNSMASRSRTHLAELTLPASELRRLTNLALRIKNKSRITGAGVT 279

Query: 1048 QQVVDAIHEKWKSCEVVRLKVEGAPALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTY 1227
            QQVV+ I EKWK+ EVVRLKVEGAPALNM+RMHEILERKTGGLV+WRSGTSV+LYRGV+Y
Sbjct: 280  QQVVETIREKWKTSEVVRLKVEGAPALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSY 339

Query: 1228 EDPAQKLKKRILRKNEISHK-SPSATNKTRQDSSEFGPLAATDTPQAEPVSTDPDNKYPE 1404
            E P++++KKRI+R++EI  K SP    ++ Q+S         D+ + + V T  +NK  +
Sbjct: 340  ETPSERMKKRIMRRDEIRQKNSPIVDGESNQNSRN-----DVDSLREDSVDTSEENKSID 394

Query: 1405 TSSEVRYEDEIEKLLDSLGPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTL 1584
              SEV YEDE++KLLD LGPRY DWPG GPLPVDADLLPG+V GYQPPFR+LPYGVRSTL
Sbjct: 395  RQSEVNYEDEVDKLLDGLGPRYTDWPGSGPLPVDADLLPGIVPGYQPPFRILPYGVRSTL 454

Query: 1585 GMKEATALRRLARGLPPHFALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERM 1764
              +EATALRRLAR LPPHFALGRSRQHQGLA+ M+KLW+RSSI KIA+KRGVQLTTSERM
Sbjct: 455  AAREATALRRLARVLPPHFALGRSRQHQGLASVMVKLWQRSSIAKIAIKRGVQLTTSERM 514

Query: 1765 AEDLKRLTGGVLLSRNKDFLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSF 1944
            AED+K+LTGG+LLSRNKDFLV+YRGKDFLSP+VAE LLEKERLAK LQDEEE+AR R S 
Sbjct: 515  AEDIKKLTGGMLLSRNKDFLVFYRGKDFLSPEVAEALLEKERLAKTLQDEEEKARLRASL 574

Query: 1945 LVTPSAEETDESRTAGTLRETLDSDTRWGKQLDDDHKEKVMREAEVLRHANLVRKLEKKL 2124
             +T      + SRTAGTL ETLD+D RWGK+LDD HKE VMREAE+LRH +LVRKLEKKL
Sbjct: 575  NLTAGVTTINSSRTAGTLGETLDADARWGKRLDDKHKENVMREAELLRHGDLVRKLEKKL 634

Query: 2125 DFAEKKLTKAERALSKVEESLNPADRVEDPESLSDEERFMFRKLGLRMKAXXXXXXXXXX 2304
             FAEKKL KAER LSKVEE+LNP DR  +P+SL+DEERFMFRKLGLRMKA          
Sbjct: 635  AFAEKKLMKAERVLSKVEETLNPLDRHAEPDSLTDEERFMFRKLGLRMKAFLLLGRRGIF 694

Query: 2305 XXTVENMHLHWKYRELVKIIVKAQNIEEVKNIALSLEAESGGVLVSVDKISKGYAIIVFR 2484
              TVENMHLHWKYRELVKI+VKA+N E+V  IAL+LEAESGG+LVSVDK+SKGYAIIVFR
Sbjct: 695  DGTVENMHLHWKYRELVKIMVKAKNFEQVSKIALALEAESGGILVSVDKVSKGYAIIVFR 754

Query: 2485 GRDYKRPSLLRPKNLLTKRKALARSIELQRHQALLHHISTIETRVNQLRSEIEQMAAVKD 2664
            G+DY RP  LRPKNLLTKRKALARSIELQR +ALL HIS ++TRV QL +EIEQ+A++KD
Sbjct: 755  GKDYSRPPTLRPKNLLTKRKALARSIELQRREALLEHISAVQTRVGQLTAEIEQLASLKD 814

Query: 2665 QGDEQLYNKLDLAYPTXXXXXXXXXXXTYLETYDSENEMVDGNKDSAPNAYLETNFPYDF 2844
              D++LY+KL+ AY +            ++E +D++N++V  + DS    + E  F Y  
Sbjct: 815  SADDELYDKLNSAYSSEDEDSEEEGDDAFIEVFDNDNDVVHRSDDSDDIPHPEREFQYIH 874

Query: 2845 QEESETE 2865
            Q ESE E
Sbjct: 875  QNESERE 881


>gb|EMJ28219.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
          Length = 899

 Score =  982 bits (2538), Expect = 0.0
 Identities = 533/893 (59%), Positives = 641/893 (71%), Gaps = 12/893 (1%)
 Frame = +1

Query: 235  MAVMPSYQFHPRNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSNF 414
            M ++PS Q +P  T L DSFQSS SK H    + LFR  SS    K    A H++ +S  
Sbjct: 1    MTLVPSRQLYP--TSLFDSFQSSFSKFH-GPHIHLFRCGSSIPFKKHTFYATHYTISSTL 57

Query: 415  TPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGKKP 594
             P +NP ++ N + KN+  I  Y        K N     S +SW+D W  + K N  K P
Sbjct: 58   NPEQNPLRKSNFVRKNQ-PISQY------KPKKN----FSSSSWIDKWNESHKHNRPKPP 106

Query: 595  QAVVNYR-----NLGDVXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYIDDVSD-KNENMS 756
            +AV++Y+     NL                      +IVEKLKKFGY+DD ++ K E   
Sbjct: 107  RAVLDYQSSESGNLSGSGYAEGDGGGGRNSSGSTMEKIVEKLKKFGYVDDSNENKGEVRD 166

Query: 757  RGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDAR---SNGEVRFPWEKKAPNE--QXX 921
              IEKGS+EDIFY+EEG+LPN+RGGFSEE P G       +G+VRFPWEK    E  +  
Sbjct: 167  SVIEKGSVEDIFYIEEGMLPNSRGGFSEESPLGIENVFGGDGKVRFPWEKPKEEEKQEEG 226

Query: 922  XXXXXXXXXXAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKSCEVVR 1101
                      AELTLPESELRRL N   + K+KT+IGG GVTQ VV+ IHE+WK+ E+VR
Sbjct: 227  SVRRKSRTSLAELTLPESELRRLTNLTFQKKHKTRIGGGGVTQAVVEMIHERWKTSEIVR 286

Query: 1102 LKVEGAPALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEIS 1281
            LK+EG PALNM+RMHEILERKTGGLV+WRSGTS+SLYRGV+YE P+ KL KRI +KN+IS
Sbjct: 287  LKIEGPPALNMKRMHEILERKTGGLVIWRSGTSLSLYRGVSYEVPSVKLNKRIYKKNDIS 346

Query: 1282 HKS-PSATNKTRQDSSEFGPLAATDTPQAEPVSTDPDNKYPETSSEVRYEDEIEKLLDSL 1458
                P+  +K+  D +E    +   TPQ +  +T  + +  E  +EV+YEDE++KLLDSL
Sbjct: 347  SAPLPTVADKSVGDFAELASYSNVKTPQEKSENTSQEKEDTEQLAEVKYEDEVDKLLDSL 406

Query: 1459 GPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPH 1638
            GPR+ DWPG  PLPVDAD+LPG+V GYQPPFR+LPYGVRSTLG+KEAT+LRRLAR LPPH
Sbjct: 407  GPRFKDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLGLKEATSLRRLARVLPPH 466

Query: 1639 FALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKD 1818
            FALGRSRQ QGLA AM KLWE+S I KIALKRGVQLTTSERMAED+KRLTGGV+LSRNKD
Sbjct: 467  FALGRSRQLQGLAVAMAKLWEKSLIAKIALKRGVQLTTSERMAEDIKRLTGGVMLSRNKD 526

Query: 1819 FLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAEETDESRTAGTL 1998
            FLV+YRGK+FLSPDV E LLE+ERLAK+LQDEEE+AR R S +  P+ E      TAGTL
Sbjct: 527  FLVFYRGKNFLSPDVTEALLERERLAKSLQDEEEQARLRASAMFIPNVEVAQHFGTAGTL 586

Query: 1999 RETLDSDTRWGKQLDDDHKEKVMREAEVLRHANLVRKLEKKLDFAEKKLTKAERALSKVE 2178
             ETLD+D +WGK+LD   KEKVMREA++LRHA+LVRKLE+KL FAE+KL +AE+ALSKVE
Sbjct: 587  GETLDADAKWGKRLD---KEKVMREADILRHAHLVRKLERKLSFAERKLMRAEQALSKVE 643

Query: 2179 ESLNPADRVEDPESLSDEERFMFRKLGLRMKAXXXXXXXXXXXXTVENMHLHWKYRELVK 2358
            ESL P+ +  DPES++DEERFMFRKLGLRMKA            TVENMHLHWKYRELVK
Sbjct: 644  ESLKPSKQQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK 703

Query: 2359 IIVKAQNIEEVKNIALSLEAESGGVLVSVDKISKGYAIIVFRGRDYKRPSLLRPKNLLTK 2538
            I+V A+  E+VKNIAL+LEAESGGVLVSVDK+SK +AIIV+RG+DY RPS LRPKNLLTK
Sbjct: 704  IMVNAKTFEQVKNIALALEAESGGVLVSVDKVSKKFAIIVYRGKDYHRPSTLRPKNLLTK 763

Query: 2539 RKALARSIELQRHQALLHHISTIETRVNQLRSEIEQMAAVKDQGDEQLYNKLDLAYPTXX 2718
            RKALARSIELQR +ALL HIS ++++V+ LRSEIEQM +VKDQGDE LYNKLD +YPT  
Sbjct: 764  RKALARSIELQRQEALLKHISAVQSKVDTLRSEIEQMDSVKDQGDEALYNKLDSSYPT-- 821

Query: 2719 XXXXXXXXXTYLETYDSENEMVDGNKDSAPNAYLETNFPYDFQEESETEFAEP 2877
                      YLETY+ ENE  D    S  N  LETNFPY   ++S+TE   P
Sbjct: 822  DDEDSEEVDAYLETYNRENEGEDEGNYSICNPQLETNFPYFENQDSQTELEVP 874


>gb|EOY05900.1| CRM family member 3A isoform 1 [Theobroma cacao]
          Length = 876

 Score =  972 bits (2512), Expect = 0.0
 Identities = 517/891 (58%), Positives = 640/891 (71%), Gaps = 15/891 (1%)
 Frame = +1

Query: 235  MAVMPSYQFHP----RNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSS 402
            M ++P+ QFHP    ++TFL DSFQ+ +SK H          SS+F      L A +++ 
Sbjct: 1    MTLLPTRQFHPATTTKSTFL-DSFQTRLSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTV 59

Query: 403  NSNFTPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNC 582
             SN   H+ P  +    P    +                      ++WLD+W  T K   
Sbjct: 60   TSNSLFHQYPKSKTKAFPTKDPTF--------------------RSNWLDSWNKTHKGFG 99

Query: 583  GKKPQAVVNYRNLGDVXXXXXXXXXXXXXXXXXXX-RIVEKLKKFGYIDDVSDKNEN--- 750
             K P+ V NYR  GDV                    +IVEKLKKFGYI + +++ E    
Sbjct: 100  PKPPKTVFNYRKKGDVWSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEE 159

Query: 751  -MSRGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDAR---SNGEVRFPWEKKAPNEQX 918
               R IE+GSIEDIFYVEEG+LPN RGGFS+E P G      S+GEVRFPWEK+  +E+ 
Sbjct: 160  EPKRVIERGSIEDIFYVEEGMLPNNRGGFSKESPLGMENVFGSDGEVRFPWEKRKEDEEE 219

Query: 919  XXXXXXXXXXX--AELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKSCE 1092
                         AELTLPESELRRLRN   R K+K +I GAGVTQ+VVD IHEKWK+ E
Sbjct: 220  GGWTARRDSKTSLAELTLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEE 279

Query: 1093 VVRLKVEGAPALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTYEDPAQKLKKRILRKN 1272
            +VRLK+EGAPALNM+RMHEILERKTGGLV+WRSGTSVSLYRGV+YE P+  L KRI ++N
Sbjct: 280  IVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKRIYKRN 339

Query: 1273 E-ISHKSPSATNKTRQDSSEFGPLAATDTPQAEPVSTDPDNKYPETSSEVRYEDEIEKLL 1449
            E  ++  PS ++KT+ D S  G      +PQA   +    NK  E+  E+RYEDE++KLL
Sbjct: 340  ETFTYALPSVSDKTK-DLSSLGSHKDVVSPQANSETAAEGNKDTESLPEIRYEDEVDKLL 398

Query: 1450 DSLGPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGL 1629
            + LGPRY DWPG  PLPVDADLLPG+VAGYQPPFR+LPYGVRS+LG+KEAT+LRRLAR L
Sbjct: 399  EGLGPRYTDWPGCNPLPVDADLLPGIVAGYQPPFRVLPYGVRSSLGLKEATSLRRLARVL 458

Query: 1630 PPHFALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSR 1809
            PPHFA+GRSRQ QGLA AMIKLWE+SSI KIALKRGVQLTTSERMAED+K+LTGG+LLSR
Sbjct: 459  PPHFAIGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGMLLSR 518

Query: 1810 NKDFLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAEETDESRTA 1989
            NKDFLV+YRGK+FLS DVAE L+E+ERLAK+LQDEEE+AR R S  + PS E  ++S  A
Sbjct: 519  NKDFLVFYRGKNFLSADVAEALVERERLAKSLQDEEEQARLRASAFLVPSTEVAEQSGAA 578

Query: 1990 GTLRETLDSDTRWGKQLDDDHKEKVMREAEVLRHANLVRKLEKKLDFAEKKLTKAERALS 2169
            GTL ETLD+D RWGK+LD+ HKEKVM+EAE+LRHANLVRKL+K L FA++KL KAERAL+
Sbjct: 579  GTLGETLDADARWGKRLDNHHKEKVMKEAEILRHANLVRKLDKNLAFADRKLLKAERALT 638

Query: 2170 KVEESLNPADRVEDPESLSDEERFMFRKLGLRMKAXXXXXXXXXXXXTVENMHLHWKYRE 2349
            KVE+ L PADR  DPES++DEERFMFRKLGLRMKA            T+ENMHLHWKYRE
Sbjct: 639  KVEDYLKPADRQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRE 698

Query: 2350 LVKIIVKAQNIEEVKNIALSLEAESGGVLVSVDKISKGYAIIVFRGRDYKRPSLLRPKNL 2529
            LVKII+KA+  ++VK +AL+LEAESGGVLVSVD+ISKGYAIIV+RG+DY+RPS +RPKNL
Sbjct: 699  LVKIIMKAKTFDQVKKVALALEAESGGVLVSVDRISKGYAIIVYRGKDYQRPSTIRPKNL 758

Query: 2530 LTKRKALARSIELQRHQALLHHISTIETRVNQLRSEIEQMAAVKDQGDEQLYNKLDLAYP 2709
            LTKR+ALARSIELQR +AL+ H+S ++ +V+++RSEI+QM ++++QGDE+ Y++LD +YP
Sbjct: 759  LTKRRALARSIELQRREALVKHVSALQAKVDKIRSEIDQMHSMEEQGDEEFYDRLDSSYP 818

Query: 2710 TXXXXXXXXXXXTYLETYDSENEMVDGNKDSAPNAYLETNFPYDFQEESET 2862
            T            YLETY+SEN+  + N +   N +LET FP+  Q   E+
Sbjct: 819  TDDDDTEEEGDEAYLETYESENDAEEENDELIHNLHLETKFPFHDQHHQES 869


>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Vitis vinifera]
            gi|297737163|emb|CBI26364.3| unnamed protein product
            [Vitis vinifera]
          Length = 902

 Score =  972 bits (2512), Expect = 0.0
 Identities = 535/895 (59%), Positives = 636/895 (71%), Gaps = 16/895 (1%)
 Frame = +1

Query: 235  MAVMPSYQFHPRNTFLMDSFQSSVSKLHVRTALQLFRYSSS--FSTNKQFLCAIHHSSNS 408
            MA++PS QF+P  T  +DSF S        T LQ FRY SS  F T+  ++     +SNS
Sbjct: 1    MALLPSRQFYPTTTSFLDSFHS--------TRLQFFRYGSSNRFRTHSSYVARNTIASNS 52

Query: 409  NFTPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGK 588
                  NP ++ N++  N           P SQ  +     S  +W+D W    + +  K
Sbjct: 53   T-----NPQRKSNIVFTNT----------PVSQYDSGGVSSSGGNWIDKWNGPHQKSHPK 97

Query: 589  KPQAVVNYRNLGDVXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYIDDVSDKNENMS-RGI 765
            + + V+NYRN   V                   +IVEKLKKFGY+DDV +  EN+  R I
Sbjct: 98   ESRPVMNYRNSETVSRSDGGSGGGSTME-----KIVEKLKKFGYMDDVKETKENVQERII 152

Query: 766  EKGSIEDIFYVEEGLLPNTRGGFSEEFPFG---DARSNGEVRFPWEKKAPNEQXXXXXXX 936
            EKGSIEDIFY+EEG+LPN +GGFS + P G       NGEVRFPWE+  P  +       
Sbjct: 153  EKGSIEDIFYIEEGILPNPQGGFSLDSPLGVENKGDGNGEVRFPWER--PKVEEGSVRIK 210

Query: 937  XXXXXAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKSCEVVRLKVEG 1116
                 AELTLPESELRRLRN  +R KNKTKIGG GVTQ VVD I EKWK+ E+V+LK EG
Sbjct: 211  SRTSLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEG 270

Query: 1117 APALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEISHKSPS 1296
            A ALNMRR+HEILERKTGGLV+WRSGTSVSLYRGV+YE P Q L KR+ +KNE SH S S
Sbjct: 271  AAALNMRRIHEILERKTGGLVIWRSGTSVSLYRGVSYEVPVQ-LNKRVYKKNETSHSSFS 329

Query: 1297 A---------TNKTRQDSSEFGPLAATDTPQAEPVSTDPDNKYPETSSEVRYEDEIEKLL 1449
            +         +NKT  ++   G        QA    TD +NK  +T SEV+YEDEI+KLL
Sbjct: 330  SITPNSFAISSNKTSGNAPAVGSNQNVHASQATLNITDGENK--DTESEVKYEDEIDKLL 387

Query: 1450 DSLGPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGL 1629
            D LGPRY DWPG  PLP+DADLLPG + GYQPPFR+LPYGVRS+LG+KEATALRRLAR L
Sbjct: 388  DGLGPRYTDWPGCDPLPIDADLLPGKIHGYQPPFRILPYGVRSSLGLKEATALRRLARVL 447

Query: 1630 PPHFALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSR 1809
            PPHFALGRSRQ +GLA AMIKLWERSSI K+ALKRGVQLTTSERMAED+K+LTGGVLLSR
Sbjct: 448  PPHFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVLLSR 507

Query: 1810 NKDFLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAEETDESRTA 1989
            NKDFLV+YRGK+FLS DV E LLE+ERLAKALQDEEE+AR R S L+TP+   T++  +A
Sbjct: 508  NKDFLVFYRGKNFLSSDVTEALLERERLAKALQDEEEQARLRASTLITPTVGITEQVGSA 567

Query: 1990 GTLRETLDSDTRWGKQLDDDHKEKVMREAEVLRHANLVRKLEKKLDFAEKKLTKAERALS 2169
            GTL ETL++D RWGK+LDD  K+K++++AEV RHANLVRKLE++L  AE+KL KAE ALS
Sbjct: 568  GTLGETLEADARWGKRLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENALS 627

Query: 2170 KVEESLNPADRVEDPESLSDEERFMFRKLGLRMKAXXXXXXXXXXXXTVENMHLHWKYRE 2349
            KVEE L PA+R  DPES++DEERFMFRKLGLRMKA            TVENMHLHWKYRE
Sbjct: 628  KVEEFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYRE 687

Query: 2350 LVKIIVKAQNIEEVKNIALSLEAESGGVLVSVDKISKGYAIIVFRGRDYKRPSLLRPKNL 2529
            LVKIIVKA+  ++VK  AL+LE+ESGGVLVSVDK+SKG+AI+VFRG+DY+RPS LRPKNL
Sbjct: 688  LVKIIVKAKTFDQVKKTALALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPSTLRPKNL 747

Query: 2530 LTKRKALARSIELQRHQALLHHISTIETRVNQLRSEIEQMAAVKDQGDEQLYNKLDLAYP 2709
            LTKRKALARSIELQR +AL +HIS ++  V +LRSEIEQM  VKD GDE+LY+KLD AY 
Sbjct: 748  LTKRKALARSIELQRREALYNHISALQRNVEKLRSEIEQMDIVKDHGDEELYDKLDSAYA 807

Query: 2710 TXXXXXXXXXXXTYLETYDSENEMVDGNKDSAPNAYLETNFPYDFQ-EESETEFA 2871
            T            YLETY  EN+    + +S  N ++ETNFPYD Q EE ETE A
Sbjct: 808  TEDEHTEEEGDEAYLETYADENDGEHESDNSIHNHHIETNFPYDIQGEEFETEAA 862


>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score =  969 bits (2506), Expect = 0.0
 Identities = 534/895 (59%), Positives = 635/895 (70%), Gaps = 16/895 (1%)
 Frame = +1

Query: 235  MAVMPSYQFHPRNTFLMDSFQSSVSKLHVRTALQLFRYSSS--FSTNKQFLCAIHHSSNS 408
            MA++PS QF+P  T  +DSF S        T LQ FRY SS  F T+  ++     +SNS
Sbjct: 1    MALLPSRQFYPTTTSFLDSFHS--------TRLQFFRYGSSNRFRTHSSYVTRNTIASNS 52

Query: 409  NFTPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGK 588
                  NP ++ N++  N           P SQ  +     S  +W+D W    + +  K
Sbjct: 53   T-----NPQRKSNIVFTNT----------PVSQYDSGGVSSSGGNWIDKWNGPHQKSHPK 97

Query: 589  KPQAVVNYRNLGDVXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYIDDVSDKNENMS-RGI 765
            + + V+NYRN   V                   +IVEKLKKFGY+DDV +  EN+  R I
Sbjct: 98   EXRPVMNYRNSETVSRSDGGSGGGSTME-----KIVEKLKKFGYMDDVKETKENVQERII 152

Query: 766  EKGSIEDIFYVEEGLLPNTRGGFSEEFPFG---DARSNGEVRFPWEKKAPNEQXXXXXXX 936
            EKGSIEDIFY+EEG+LPN +GGFS + P G       NGEVRFPWE+  P  +       
Sbjct: 153  EKGSIEDIFYIEEGILPNPQGGFSLDSPLGVENKGDGNGEVRFPWER--PKVEEGSVRIK 210

Query: 937  XXXXXAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKSCEVVRLKVEG 1116
                 AELTLPESELRRLRN  +R KNKTKIGG GVTQ VVD I EKWK+ E+V+LK EG
Sbjct: 211  SRTSLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEG 270

Query: 1117 APALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEISHKSPS 1296
            A ALNMRR+HEILERKTGGLV+WRSGTSVSLYRGV+YE P Q L KR+ +KNE SH S S
Sbjct: 271  AAALNMRRIHEILERKTGGLVIWRSGTSVSLYRGVSYEVPVQ-LNKRVYKKNETSHSSFS 329

Query: 1297 A---------TNKTRQDSSEFGPLAATDTPQAEPVSTDPDNKYPETSSEVRYEDEIEKLL 1449
            +         +NKT  ++   G        QA    TD +NK  +T SEV+YEDEI+KLL
Sbjct: 330  SITPNSFAISSNKTSGNAPAVGSNQNVHASQATLXITDGENK--DTESEVKYEDEIDKLL 387

Query: 1450 DSLGPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGL 1629
            D LGPRY DWP   PLP+DADLLPG + GYQPPFR+LPYGVRS+LG+KEATALRRLAR L
Sbjct: 388  DGLGPRYTDWPXCDPLPIDADLLPGKIHGYQPPFRILPYGVRSSLGLKEATALRRLARVL 447

Query: 1630 PPHFALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSR 1809
            PPHFALGRSRQ +GLA AMIKLWERSSI K+ALKRGVQLTTSERMAED+K+LTGGVLLSR
Sbjct: 448  PPHFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVLLSR 507

Query: 1810 NKDFLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAEETDESRTA 1989
            NKDFLV+YRGK+FLS DV E LLE+ERLAKALQDEEE+AR R S L+TP+   T++  +A
Sbjct: 508  NKDFLVFYRGKNFLSSDVTEALLERERLAKALQDEEEQARLRASTLITPTVGITEQVGSA 567

Query: 1990 GTLRETLDSDTRWGKQLDDDHKEKVMREAEVLRHANLVRKLEKKLDFAEKKLTKAERALS 2169
            GTL ETL++D RWGK+LDD  K+K++++AEV RHANLVRKLE++L  AE+KL KAE ALS
Sbjct: 568  GTLGETLEADARWGKRLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENALS 627

Query: 2170 KVEESLNPADRVEDPESLSDEERFMFRKLGLRMKAXXXXXXXXXXXXTVENMHLHWKYRE 2349
            KVEE L PA+R  DPES++DEERFMFRKLGLRMKA            TVENMHLHWKYRE
Sbjct: 628  KVEEFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYRE 687

Query: 2350 LVKIIVKAQNIEEVKNIALSLEAESGGVLVSVDKISKGYAIIVFRGRDYKRPSLLRPKNL 2529
            LVKIIVKA+  ++VK  AL+LE+ESGGVLVSVDK+SKG+AI+VFRG+DY+RPS LRPKNL
Sbjct: 688  LVKIIVKAKTFDQVKKTALALESESGGVLVSVDKVSKGFAIVVFRGKDYQRPSTLRPKNL 747

Query: 2530 LTKRKALARSIELQRHQALLHHISTIETRVNQLRSEIEQMAAVKDQGDEQLYNKLDLAYP 2709
            LTKRKALARSIELQR +AL +HIS ++  V +LRSEIEQM  VKD GDE+LY+KLD AY 
Sbjct: 748  LTKRKALARSIELQRREALYNHISALQRNVEKLRSEIEQMDIVKDHGDEELYDKLDSAYA 807

Query: 2710 TXXXXXXXXXXXTYLETYDSENEMVDGNKDSAPNAYLETNFPYDFQ-EESETEFA 2871
            T            YLETY  EN+    + +S  N ++ETNFPYD Q EE ETE A
Sbjct: 808  TEDEHTEEEGDEAYLETYADENDGEHESDNSIHNHHIETNFPYDIQDEEFETEAA 862


>ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Populus trichocarpa]
            gi|222864769|gb|EEF01900.1| hypothetical protein
            POPTR_0010s08770g [Populus trichocarpa]
          Length = 894

 Score =  957 bits (2475), Expect = 0.0
 Identities = 527/892 (59%), Positives = 644/892 (72%), Gaps = 15/892 (1%)
 Frame = +1

Query: 235  MAVMPSYQFHPRNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSNF 414
            MA++PS Q +      +DSFQSS SK H  T LQ FRYSSSF           HS  +  
Sbjct: 1    MALVPSRQLY------IDSFQSSFSKFH-GTPLQFFRYSSSFPLRS-------HSGYACS 46

Query: 415  TPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGKKP 594
               KNP  +    P +K+   N ++                +SW  NW    K N  + P
Sbjct: 47   ITDKNPSTKSTSFPTDKSKTLNLSTG---------------SSWFFNWNKPNKQNLPRTP 91

Query: 595  QAVVNYRNLGDVXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYID-DVSDKNENMS-RGIE 768
            QAV +YR+                       +IVEKLKK GY+D DV++  E M  R IE
Sbjct: 92   QAVFDYRSNNS----------NSSGSGSTMEKIVEKLKKHGYMDGDVNENKERMQERVIE 141

Query: 769  KGSIEDIFYVEEGLLPNTRGGFSEEFPFGDA---RSNGEVRFPWEK--KAPNEQXXXXXX 933
            KGS+EDIFYVEEG+LPN RGGFS+E P G     RS+GEVRFPWEK  K  +E       
Sbjct: 142  KGSVEDIFYVEEGMLPNARGGFSKESPLGVEDVFRSDGEVRFPWEKPKKEEDEGKWTARS 201

Query: 934  XXXXXXAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKSCEVVRLKVE 1113
                  AELTLPESELRRLRN     K+KT++GG GVTQ+VVDAIH+KWK+ E+ R+KVE
Sbjct: 202  KSRTSLAELTLPESELRRLRNLTYGTKSKTRVGGRGVTQEVVDAIHDKWKTSEIARVKVE 261

Query: 1114 GAPALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEISHKS- 1290
            GAPALNM+RMHEILE KTGGLV+WRSG +VSLYRGV+YEDPA K KKRI +K E S  S 
Sbjct: 262  GAPALNMKRMHEILENKTGGLVIWRSGATVSLYRGVSYEDPALKWKKRIFKKKETSSNSL 321

Query: 1291 PSATNKTRQDSSEFGPLAATDTPQAEP-VSTDPDN-KYPETSSEVRYEDEIEKLLDSLGP 1464
            P+AT+ T    S+  P      P+ +  ++ +  N K  +T ++V+YEDE++KLLD LGP
Sbjct: 322  PAATSITIGSQSKNSPDNEIHAPRPKTEINVEAANQKETKTQTDVKYEDEVDKLLDGLGP 381

Query: 1465 RYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPHFA 1644
            RY DWPG  PLPVDAD+LPGV+ GYQPPFR+LPYGVR TLG +++T+LRRLAR LPPHFA
Sbjct: 382  RYTDWPGLDPLPVDADMLPGVIPGYQPPFRILPYGVRPTLGRQDSTSLRRLARVLPPHFA 441

Query: 1645 LGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKDFL 1824
            +GRSRQ QGLA AMIKLWE+SSIVK+ALKRGVQLTTSERMAED+K+LTGG+LLSRNKDFL
Sbjct: 442  VGRSRQLQGLAVAMIKLWEKSSIVKVALKRGVQLTTSERMAEDIKKLTGGLLLSRNKDFL 501

Query: 1825 VYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAEETDESRTAGTLRE 2004
            V+YRGKDFLSP+V+E LLE+ERLAK+LQDEEE+AR R S LV PS E  +ES  AG+L E
Sbjct: 502  VFYRGKDFLSPEVSEALLERERLAKSLQDEEEQARLRASALVIPSDEIMEESGIAGSLEE 561

Query: 2005 TLDSDTRWGKQLDDDHKEKVMREAEVLRHANLVRKLEKKLDFAEKKLTKAERALSKVEES 2184
            TLD+D +WGK+LDD HKEK++REAE++RHA++VR+LEKKL FA++KL +AER L+KVE  
Sbjct: 562  TLDADAKWGKRLDDCHKEKIIREAEIVRHASIVRRLEKKLAFAQRKLRRAERTLNKVEGF 621

Query: 2185 LNPADRVEDPESLSDEERFMFRKLGLRMKAXXXXXXXXXXXXTVENMHLHWKYRELVKII 2364
            L P++R  DPES++DEERFMFRKLGLRMKA            TVENMHLHWKYRELVKII
Sbjct: 622  LKPSERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKII 681

Query: 2365 VKAQNIEEVKNIALSLEAESGGVLVSVDKISKGYAIIVFRGRDYKRPSLLRPKNLLTKRK 2544
            +KA++ E+VK IAL+LEAESGGVLVSVDKISKGYAIIV+RG+DY+RPS+LRPKNLLTKRK
Sbjct: 682  LKAKSFEQVKKIALALEAESGGVLVSVDKISKGYAIIVYRGKDYQRPSMLRPKNLLTKRK 741

Query: 2545 ALARSIELQRHQALLHHISTIETRVNQLRSEIEQMAAVKDQGDEQLYNKLDLAYPT--XX 2718
            ALARSIE+QR +AL +H+S +E +V ++RSEIEQM  VKD+GDE+LY++LD AY T    
Sbjct: 742  ALARSIEIQRSEALQNHVSALEIKVEKIRSEIEQMGFVKDKGDEELYDRLDSAYLTDDDA 801

Query: 2719 XXXXXXXXXTYLETYDSENEM-VDGNKDS-APNAYLETNFPYDFQ-EESETE 2865
                      YLETY+SEN++  D   DS   NA+L+TN   + Q +ESETE
Sbjct: 802  DDSEDEGDEAYLETYNSENDVDYDDETDSTVHNAHLDTNLLNNVQIQESETE 853


>ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Citrus sinensis]
          Length = 933

 Score =  946 bits (2446), Expect = 0.0
 Identities = 532/923 (57%), Positives = 630/923 (68%), Gaps = 43/923 (4%)
 Frame = +1

Query: 235  MAVMPSYQFHPRNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSNF 414
            MA++PS QF P  T + DSFQSS SK H  T    FR   S     +F    + + +SN 
Sbjct: 1    MALVPSRQFCPA-TAIFDSFQSSFSKFH-GTHFHFFRCGHSIPLKNRFF---YQNFSSNS 55

Query: 415  TPHKNPHKRFNLLPKNKNSICNYASEPPNSQ--KSNCATILSHNSWLDNWTITAKPNCGK 588
               KNP ++           C++++    SQ  K + A + S +SWL  W    K N  K
Sbjct: 56   AHEKNPPRK----------TCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLK 105

Query: 589  KPQAVVNYRN-------LGDVXXXXXXXXXXXXXXXXXXX-RIVEKLKKFGYIDDVSDKN 744
             PQA VNYR        LG                      +IVEKLKKFGY+ D     
Sbjct: 106  PPQASVNYRKNNVDLSALGFARTDSDGNGVGGVDDGGNTMGKIVEKLKKFGYVGDGDGDG 165

Query: 745  EN-------MSRGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFG---DARSNGEVRFPWE 894
            +N         R IEKGSIEDIFYVEEGLLPN RGGFS+E P G   +  S+GEV+FPWE
Sbjct: 166  DNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWE 225

Query: 895  KKAPN--EQXXXXXXXXXXXXAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAI 1068
            K+     E             AELTLPESELRRLRN   + K+KT+I GAG+TQ VVD I
Sbjct: 226  KRKEEVAEGRWLVKRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDII 285

Query: 1069 HEKWKSCEVVRLKVEGAPALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTYEDPAQKL 1248
            HEKWK+ E+VRLK+EGAPALNM+RMHEILERKTGGLV+WRSGT+VSLYRGV+YE P+ +L
Sbjct: 286  HEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQL 345

Query: 1249 KKRILRKNEISHKSPS--------------------ATNKTRQDSSEFGPLAATDTPQAE 1368
             KRI ++NE+   S S                    A +KT QD S F         Q  
Sbjct: 346  NKRIYKRNELPASSVSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHATQVN 405

Query: 1369 PVSTDPDNKYPETSSEVRYEDEIEKLLDSLGPRYADWPGEGPLPVDADLLPGVVAGYQPP 1548
             + T  + +  +   EV+YEDE+EKLLD LGPRY DWPG  PLPVDAD+LPG+V GYQPP
Sbjct: 406  -LETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPP 464

Query: 1549 FRLLPYGVRSTLGMKEATALRRLARGLPPHFALGRSRQHQGLAAAMIKLWERSSIVKIAL 1728
            FR+LPYGVRSTL  KEAT L+RLAR LPPHFALGRSRQ QGLA AMIKLWE+SSI KIAL
Sbjct: 465  FRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIAL 524

Query: 1729 KRGVQLTTSERMAEDLKRLTGGVLLSRNKDFLVYYRGKDFLSPDVAEVLLEKERLAKALQ 1908
            KRGVQLTTSERM ED+K+LTGG LLSRNKDFLV+YRGK+FLSPDV E L E+ERLAK+LQ
Sbjct: 525  KRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQ 584

Query: 1909 DEEERARSRTSFLVTPSAEETDESRTAGTLRETLDSDTRWGKQLDDDHKEKVMREAEVLR 2088
            DEEE+AR R S  V PS E  ++S TAGTL+ETLD+++RWGK+LDD HKE ++REAEV R
Sbjct: 585  DEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRR 644

Query: 2089 HANLVRKLEKKLDFAEKKLTKAERALSKVEESLNPADRVEDPESLSDEERFMFRKLGLRM 2268
            HA LV+KLEKKL  AE+KL +AERALSKVEESL PA+R  DPES++DEERFMFRKLGLRM
Sbjct: 645  HAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRM 704

Query: 2269 KAXXXXXXXXXXXXTVENMHLHWKYRELVKIIVKAQNIEEVKNIALSLEAESGGVLVSVD 2448
            KA            TVENMHLHWKYRELVKIIVK +  ++ K IAL+LEAESGGVLVSVD
Sbjct: 705  KAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVD 764

Query: 2449 KISKGYAIIVFRGRDYKRPSLLRPKNLLTKRKALARSIELQRHQALLHHISTIETRVNQL 2628
            KISKGYA++V+RG+DY+RPS LRPKNLLTKRKALARSIELQR +ALL H++T+E+   +L
Sbjct: 765  KISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRL 824

Query: 2629 RSEIEQMAAVKDQGDEQLYNKLDLAYPTXXXXXXXXXXXTYLETYDSENEMVDGNKDSAP 2808
            RSEIEQM +VK  GDEQLY+KLD AY T            YLE Y   N+  D   +S  
Sbjct: 825  RSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDEIDNSTH 884

Query: 2809 NAYLETNFPYDFQ-EESETEFAE 2874
            N  +E++FPY  Q +ESETE  +
Sbjct: 885  NLEMESDFPYHAQDQESETELMD 907


>ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
            gi|557521988|gb|ESR33355.1| hypothetical protein
            CICLE_v10004262mg [Citrus clementina]
          Length = 934

 Score =  941 bits (2433), Expect = 0.0
 Identities = 530/924 (57%), Positives = 629/924 (68%), Gaps = 44/924 (4%)
 Frame = +1

Query: 235  MAVMPSYQFHPRNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSNF 414
            MA++PS QF P  T + DSFQSS SK H  T    FR   S      F    + + +SN 
Sbjct: 1    MALVPSRQFCPA-TAIFDSFQSSFSKFH-GTHFHFFRCGHSIPLKNHFF---YQNFSSNS 55

Query: 415  TPHKNPHKRFNLLPKNKNSICNYASEPPNSQ--KSNCATILSHNSWLDNWTITAKPNCGK 588
               KN  ++          IC++++    SQ  K + A + S +SWL  W    K N  K
Sbjct: 56   AHEKNTPRK----------ICSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLK 105

Query: 589  KPQAVVNYRN-------LGDVXXXXXXXXXXXXXXXXXXX-RIVEKLKKFGYIDDVSDKN 744
             PQA VNYR        LG                      +IVEKLKKFGY+ D     
Sbjct: 106  PPQASVNYRKNNVDLSALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDG 165

Query: 745  EN-------MSRGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFG---DARSNGEVRFPWE 894
            +N         R IEKGSIEDIFYVEEGLLPN RGGFS+E P G   +  S+GEV+FPWE
Sbjct: 166  DNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWE 225

Query: 895  KK---APNEQXXXXXXXXXXXXAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDA 1065
            K+       +            AELTLPESELRRLRN   + K+KT+I GAG+TQ VVD 
Sbjct: 226  KRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDI 285

Query: 1066 IHEKWKSCEVVRLKVEGAPALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTYEDPAQK 1245
            IHEKWK+ E+VRLK+EGAPALNM+RMHEILERKTGGLV+WRSGT+VSLYRGV+YE P+ +
Sbjct: 286  IHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQ 345

Query: 1246 LKKRILRKNEISHKSPS--------------------ATNKTRQDSSEFGPLAATDTPQA 1365
            L KRI ++NE+   S S                    A +KT QD S F         Q 
Sbjct: 346  LNKRIYKRNELPASSVSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHVTQV 405

Query: 1366 EPVSTDPDNKYPETSSEVRYEDEIEKLLDSLGPRYADWPGEGPLPVDADLLPGVVAGYQP 1545
              + T  + +  +   EV+YEDE+EKLLD LGPRY DWPG  PLPVDAD+LPG+V GYQP
Sbjct: 406  N-LETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQP 464

Query: 1546 PFRLLPYGVRSTLGMKEATALRRLARGLPPHFALGRSRQHQGLAAAMIKLWERSSIVKIA 1725
            PFR+LPYGVRSTL  KEAT L+RLAR LPPHFALGRSRQ QGLA AMIKLWE+SSI KIA
Sbjct: 465  PFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIA 524

Query: 1726 LKRGVQLTTSERMAEDLKRLTGGVLLSRNKDFLVYYRGKDFLSPDVAEVLLEKERLAKAL 1905
            LKRGVQLTTSERM ED+K+LTGG LLSRNKDFLV+YRGK+FLSPDV E L E+ERLAK+L
Sbjct: 525  LKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSL 584

Query: 1906 QDEEERARSRTSFLVTPSAEETDESRTAGTLRETLDSDTRWGKQLDDDHKEKVMREAEVL 2085
            QDEEE+AR R S  V PS E  ++S TAGTL+ETLD+++RWGK+LDD HKE ++REAEV 
Sbjct: 585  QDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVR 644

Query: 2086 RHANLVRKLEKKLDFAEKKLTKAERALSKVEESLNPADRVEDPESLSDEERFMFRKLGLR 2265
            RHA LV+KLEKKL  AE+KL +AERALSKVEESL PA+R  DPES+++EERFMFRKLGLR
Sbjct: 645  RHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITNEERFMFRKLGLR 704

Query: 2266 MKAXXXXXXXXXXXXTVENMHLHWKYRELVKIIVKAQNIEEVKNIALSLEAESGGVLVSV 2445
            MKA            TVENMHLHWKYRELVKIIVK +  ++ K IAL+LEAESGGVLVSV
Sbjct: 705  MKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSV 764

Query: 2446 DKISKGYAIIVFRGRDYKRPSLLRPKNLLTKRKALARSIELQRHQALLHHISTIETRVNQ 2625
            DKISKGYA++V+RG+DY+RPS LRPKNLLTKRKALARSIELQR +ALL H++T+E+   +
Sbjct: 765  DKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGR 824

Query: 2626 LRSEIEQMAAVKDQGDEQLYNKLDLAYPTXXXXXXXXXXXTYLETYDSENEMVDGNKDSA 2805
            LRSEIEQM +VK  GDEQLY+KLD AY T            YLE Y   N+  D   +S 
Sbjct: 825  LRSEIEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDEIDNST 884

Query: 2806 PNAYLETNFPYDFQ-EESETEFAE 2874
             N  +E++FPY  Q +ESETE  +
Sbjct: 885  HNLEMESDFPYHAQDQESETELMD 908


>gb|EOY05902.1| CRM family member 3A isoform 3 [Theobroma cacao]
          Length = 856

 Score =  939 bits (2426), Expect = 0.0
 Identities = 508/891 (57%), Positives = 623/891 (69%), Gaps = 15/891 (1%)
 Frame = +1

Query: 235  MAVMPSYQFHP----RNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSS 402
            M ++P+ QFHP    ++TFL DSFQ+ +SK H          SS+F      L A +++ 
Sbjct: 1    MTLLPTRQFHPATTTKSTFL-DSFQTRLSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTV 59

Query: 403  NSNFTPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNC 582
             SN   H+ P  +    P    +                      ++WLD+W  T K   
Sbjct: 60   TSNSLFHQYPKSKTKAFPTKDPTF--------------------RSNWLDSWNKTHKGFG 99

Query: 583  GKKPQAVVNYRNLGDVXXXXXXXXXXXXXXXXXXX-RIVEKLKKFGYIDDVSDKNEN--- 750
             K P+ V NYR  GDV                    +IVEKLKKFGYI + +++ E    
Sbjct: 100  PKPPKTVFNYRKKGDVWSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEKGEE 159

Query: 751  -MSRGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDAR---SNGEVRFPWEKKAPNEQX 918
               R IE+GSIEDIFYVEEG+LPN RGGFS+E P G      S+GEVRFPWEK+  +E+ 
Sbjct: 160  EPKRVIERGSIEDIFYVEEGMLPNNRGGFSKESPLGMENVFGSDGEVRFPWEKRKEDEEE 219

Query: 919  XXXXXXXXXXX--AELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKSCE 1092
                         AELTLPESELRRLRN   R K+K +I GAGVTQ+VVD IHEKWK+ E
Sbjct: 220  GGWTARRDSKTSLAELTLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEE 279

Query: 1093 VVRLKVEGAPALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTYEDPAQKLKKRILRKN 1272
            +VRLK+EGAPALNM+RMHEILERKTGGLV+WRSGTSVSLYRGV+YE P+  L KRI ++N
Sbjct: 280  IVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKRIYKRN 339

Query: 1273 E-ISHKSPSATNKTRQDSSEFGPLAATDTPQAEPVSTDPDNKYPETSSEVRYEDEIEKLL 1449
            E  ++  PS ++KT+ D S  G      +PQA   +    NK  E+  E+RYEDE++KLL
Sbjct: 340  ETFTYALPSVSDKTK-DLSSLGSHKDVVSPQANSETAAEGNKDTESLPEIRYEDEVDKLL 398

Query: 1450 DSLGPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGL 1629
            + LGPRY DWPG  PLPVDADLLPG+VAGYQPPFR+LPYGVRS+LG+KEAT+LRRLAR L
Sbjct: 399  EGLGPRYTDWPGCNPLPVDADLLPGIVAGYQPPFRVLPYGVRSSLGLKEATSLRRLARVL 458

Query: 1630 PPHFALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSR 1809
            PPHFA+GRSRQ QGLA AMIKLWE+SSI KIALKRGVQLTTSERMAED+K+LTGG+LLSR
Sbjct: 459  PPHFAIGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGMLLSR 518

Query: 1810 NKDFLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAEETDESRTA 1989
            NKDFLV+YRGK+FLS DVAE L+E+ERLAK+LQDEEE+AR R S  + PS E  ++S  A
Sbjct: 519  NKDFLVFYRGKNFLSADVAEALVERERLAKSLQDEEEQARLRASAFLVPSTEVAEQSGAA 578

Query: 1990 GTLRETLDSDTRWGKQLDDDHKEKVMREAEVLRHANLVRKLEKKLDFAEKKLTKAERALS 2169
            GTL ETLD+D RWGK+LD+ HKEKVM+EAE+LRHANLVRKL+K L FA++KL KAERAL+
Sbjct: 579  GTLGETLDADARWGKRLDNHHKEKVMKEAEILRHANLVRKLDKNLAFADRKLLKAERALT 638

Query: 2170 KVEESLNPADRVEDPESLSDEERFMFRKLGLRMKAXXXXXXXXXXXXTVENMHLHWKYRE 2349
            KVE+ L PADR  DPES++DEERFMFRKLGLRMKA            T+ENMHLHWKYRE
Sbjct: 639  KVEDYLKPADRQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRE 698

Query: 2350 LVKIIVKAQNIEEVKNIALSLEAESGGVLVSVDKISKGYAIIVFRGRDYKRPSLLRPKNL 2529
            LVKII+KA+  ++VK +AL+LEAESGGVLVSVD+ISKGYAIIV+RG+DY+RPS +RPKNL
Sbjct: 699  LVKIIMKAKTFDQVKKVALALEAESGGVLVSVDRISKGYAIIVYRGKDYQRPSTIRPKNL 758

Query: 2530 LTKRKALARSIELQRHQALLHHISTIETRVNQLRSEIEQMAAVKDQGDEQLYNKLDLAYP 2709
            LTKR+ALARSIELQR +                    +QM ++++QGDE+ Y++LD +YP
Sbjct: 759  LTKRRALARSIELQRRE--------------------DQMHSMEEQGDEEFYDRLDSSYP 798

Query: 2710 TXXXXXXXXXXXTYLETYDSENEMVDGNKDSAPNAYLETNFPYDFQEESET 2862
            T            YLETY+SEN+  + N +   N +LET FP+  Q   E+
Sbjct: 799  TDDDDTEEEGDEAYLETYESENDAEEENDELIHNLHLETKFPFHDQHHQES 849


>ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 852

 Score =  932 bits (2408), Expect = 0.0
 Identities = 511/883 (57%), Positives = 621/883 (70%), Gaps = 11/883 (1%)
 Frame = +1

Query: 235  MAVMPSYQFHPRNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSNF 414
            M ++PS Q +P +       +SS+SK H  T   LFRYSS     KQ   A  +   S+ 
Sbjct: 1    MTLVPSRQLYPTSLL-----ESSLSKFH-GTHFHLFRYSS-IPFKKQSFHATQYFITSSL 53

Query: 415  TPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGKKP 594
            TP +NP ++ NLL      IC Y    P    S+C       SW+D W  + K +  ++P
Sbjct: 54   TPEQNPPRKLNLL------ICQYK---PTKNLSSC-------SWIDRWNDSRKQHGPRRP 97

Query: 595  QAVVNYRNLGDVXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYIDDVSDKNENMS----RG 762
            +AV++Y++                       +IVEKLKKFGYI +  DKNE       R 
Sbjct: 98   RAVLDYQS-----NESGNLSSDGNDGGSTMDKIVEKLKKFGYIAE--DKNEGRGEVRERV 150

Query: 763  IEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGD----ARSNGEVRFPWEK--KAPNEQXXX 924
            IEKGS+EDIFYVEEG+LPN+RGGFS   P G         GEVRFPWEK  +   E+   
Sbjct: 151  IEKGSVEDIFYVEEGMLPNSRGGFSGVSPLGTEDVFGDGGGEVRFPWEKPREREKEEGGS 210

Query: 925  XXXXXXXXXAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKSCEVVRL 1104
                     AELTLPESELRRLRN   + K+KTKIGGAGVTQ VV+ IHE+WK+ E+VRL
Sbjct: 211  IRRRSRTSLAELTLPESELRRLRNLTFQKKHKTKIGGAGVTQAVVEMIHERWKTAEIVRL 270

Query: 1105 KVEGAPALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEISH 1284
            K+EG PALNM+RMHEILERKTGGLVVWRSGTS+SLYRGV+YE P+ +L K+I ++NEIS 
Sbjct: 271  KIEGPPALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNKQIFKRNEISS 330

Query: 1285 KS-PSATNKTRQDSSEFGPLAATDTPQAEPVSTDPDNKYPETSSEVRYEDEIEKLLDSLG 1461
             S P+  +K+  +       +   TP     +   + +  E   EV+YEDE+++LLDS+G
Sbjct: 331  TSLPTVADKSVAEPYVCATYSNVKTPLEMSENASQETEDTEQLPEVKYEDEVDELLDSIG 390

Query: 1462 PRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPHF 1641
            PR+ DWPG  PLPVDAD+LPG+V G+QPPFR+LPYGVRSTLG+KEAT+LRRLAR LPPHF
Sbjct: 391  PRFKDWPGCDPLPVDADMLPGIVPGFQPPFRILPYGVRSTLGLKEATSLRRLARVLPPHF 450

Query: 1642 ALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKDF 1821
            ALGR+RQ QGLA AM KLWERS I KIALKRGVQLTTSERMAED+K+LTGGVLLSRNKDF
Sbjct: 451  ALGRNRQLQGLAVAMSKLWERSLIAKIALKRGVQLTTSERMAEDIKKLTGGVLLSRNKDF 510

Query: 1822 LVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAEETDESRTAGTLR 2001
            LV+YRGK+FLS +V E L+E+ERLAK+LQDEEE+AR R S +V PS E      TAGTL 
Sbjct: 511  LVFYRGKNFLSAEVTEALVERERLAKSLQDEEEQARLRASAMVMPSIEPAQHFGTAGTLG 570

Query: 2002 ETLDSDTRWGKQLDDDHKEKVMREAEVLRHANLVRKLEKKLDFAEKKLTKAERALSKVEE 2181
            ETLD+D +WGK+LD  HKEKV +EA +LRHA LVRKLE+KL FAE+KL  AE+ALSKVEE
Sbjct: 571  ETLDADAKWGKRLDVHHKEKVTQEAGILRHAKLVRKLEQKLAFAERKLMGAEQALSKVEE 630

Query: 2182 SLNPADRVEDPESLSDEERFMFRKLGLRMKAXXXXXXXXXXXXTVENMHLHWKYRELVKI 2361
            SL P+ +  DPES++DEERFMFRKLGL+MKA            TVENMHLHWKYRELVKI
Sbjct: 631  SLKPSKQQADPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKI 690

Query: 2362 IVKAQNIEEVKNIALSLEAESGGVLVSVDKISKGYAIIVFRGRDYKRPSLLRPKNLLTKR 2541
            +V A+N ++VK IAL+LEAESGGVLVSVDK+SK YAIIV+RG DY+RPS+LRPKNLLTKR
Sbjct: 691  MVNAKNFDQVKKIALALEAESGGVLVSVDKVSKKYAIIVYRGNDYQRPSMLRPKNLLTKR 750

Query: 2542 KALARSIELQRHQALLHHISTIETRVNQLRSEIEQMAAVKDQGDEQLYNKLDLAYPTXXX 2721
            KALARSIELQR +ALL HI+ +++RV++LRSEIEQM  VK  GDE LYNKLD  YPT   
Sbjct: 751  KALARSIELQRQEALLKHIAAVQSRVDRLRSEIEQMDTVKHHGDEALYNKLDSCYPT-DY 809

Query: 2722 XXXXXXXXTYLETYDSENEMVDGNKDSAPNAYLETNFPYDFQE 2850
                     YLETY S+N+  + +  S  +  LE  F + F E
Sbjct: 810  EDTEEEGDAYLETYSSKNDGEEDSTSSVHSTSLENQFSFSFPE 852


>ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
            gi|557521987|gb|ESR33354.1| hypothetical protein
            CICLE_v10004262mg [Citrus clementina]
          Length = 860

 Score =  917 bits (2370), Expect = 0.0
 Identities = 512/869 (58%), Positives = 604/869 (69%), Gaps = 43/869 (4%)
 Frame = +1

Query: 235  MAVMPSYQFHPRNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSNF 414
            MA++PS QF P  T + DSFQSS SK H  T    FR   S      F    + + +SN 
Sbjct: 1    MALVPSRQFCPA-TAIFDSFQSSFSKFH-GTHFHFFRCGHSIPLKNHFF---YQNFSSNS 55

Query: 415  TPHKNPHKRFNLLPKNKNSICNYASEPPNSQ--KSNCATILSHNSWLDNWTITAKPNCGK 588
               KN  ++          IC++++    SQ  K + A + S +SWL  W    K N  K
Sbjct: 56   AHEKNTPRK----------ICSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLK 105

Query: 589  KPQAVVNYRN-------LGDVXXXXXXXXXXXXXXXXXXX-RIVEKLKKFGYIDDVSDKN 744
             PQA VNYR        LG                      +IVEKLKKFGY+ D     
Sbjct: 106  PPQASVNYRKNNVDLSALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDG 165

Query: 745  EN-------MSRGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFG---DARSNGEVRFPWE 894
            +N         R IEKGSIEDIFYVEEGLLPN RGGFS+E P G   +  S+GEV+FPWE
Sbjct: 166  DNDERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWE 225

Query: 895  KK---APNEQXXXXXXXXXXXXAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDA 1065
            K+       +            AELTLPESELRRLRN   + K+KT+I GAG+TQ VVD 
Sbjct: 226  KRKEEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDI 285

Query: 1066 IHEKWKSCEVVRLKVEGAPALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTYEDPAQK 1245
            IHEKWK+ E+VRLK+EGAPALNM+RMHEILERKTGGLV+WRSGT+VSLYRGV+YE P+ +
Sbjct: 286  IHEKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQ 345

Query: 1246 LKKRILRKNEISHKSPS--------------------ATNKTRQDSSEFGPLAATDTPQA 1365
            L KRI ++NE+   S S                    A +KT QD S F         Q 
Sbjct: 346  LNKRIYKRNELPASSVSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHVTQV 405

Query: 1366 EPVSTDPDNKYPETSSEVRYEDEIEKLLDSLGPRYADWPGEGPLPVDADLLPGVVAGYQP 1545
              + T  + +  +   EV+YEDE+EKLLD LGPRY DWPG  PLPVDAD+LPG+V GYQP
Sbjct: 406  N-LETASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQP 464

Query: 1546 PFRLLPYGVRSTLGMKEATALRRLARGLPPHFALGRSRQHQGLAAAMIKLWERSSIVKIA 1725
            PFR+LPYGVRSTL  KEAT L+RLAR LPPHFALGRSRQ QGLA AMIKLWE+SSI KIA
Sbjct: 465  PFRVLPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIA 524

Query: 1726 LKRGVQLTTSERMAEDLKRLTGGVLLSRNKDFLVYYRGKDFLSPDVAEVLLEKERLAKAL 1905
            LKRGVQLTTSERM ED+K+LTGG LLSRNKDFLV+YRGK+FLSPDV E L E+ERLAK+L
Sbjct: 525  LKRGVQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSL 584

Query: 1906 QDEEERARSRTSFLVTPSAEETDESRTAGTLRETLDSDTRWGKQLDDDHKEKVMREAEVL 2085
            QDEEE+AR R S  V PS E  ++S TAGTL+ETLD+++RWGK+LDD HKE ++REAEV 
Sbjct: 585  QDEEEQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVR 644

Query: 2086 RHANLVRKLEKKLDFAEKKLTKAERALSKVEESLNPADRVEDPESLSDEERFMFRKLGLR 2265
            RHA LV+KLEKKL  AE+KL +AERALSKVEESL PA+R  DPES+++EERFMFRKLGLR
Sbjct: 645  RHAYLVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITNEERFMFRKLGLR 704

Query: 2266 MKAXXXXXXXXXXXXTVENMHLHWKYRELVKIIVKAQNIEEVKNIALSLEAESGGVLVSV 2445
            MKA            TVENMHLHWKYRELVKIIVK +  ++ K IAL+LEAESGGVLVSV
Sbjct: 705  MKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSV 764

Query: 2446 DKISKGYAIIVFRGRDYKRPSLLRPKNLLTKRKALARSIELQRHQALLHHISTIETRVNQ 2625
            DKISKGYA++V+RG+DY+RPS LRPKNLLTKRKALARSIELQR +ALL H++T+E+   +
Sbjct: 765  DKISKGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGR 824

Query: 2626 LRSEIEQMAAVKDQGDEQLYNKLDLAYPT 2712
            LRSEIEQM +VK  GDEQLY+KLD AY T
Sbjct: 825  LRSEIEQMNSVKGTGDEQLYDKLDSAYAT 853


>gb|EPS65975.1| hypothetical protein M569_08800, partial [Genlisea aurea]
          Length = 761

 Score =  914 bits (2362), Expect = 0.0
 Identities = 498/790 (63%), Positives = 575/790 (72%), Gaps = 8/790 (1%)
 Frame = +1

Query: 235  MAVMPSYQFHPRNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSNF 414
            MAV+P YQF+P+    + S QSSVS   +R  LQL  + SS         A   +S   F
Sbjct: 1    MAVVPGYQFYPKTASFVHSLQSSVSDFQLRR-LQLISFCSS---------ARPSASRGRF 50

Query: 415  TPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWT-ITAKPNCGKK 591
             P +          + ++   N AS    +     ++     SW+D W  +    +  +K
Sbjct: 51   NPSRG---------RKRDGGRNLASGTLVADGRGASS-----SWMDFWNAVPGTQHVNRK 96

Query: 592  PQAVVNYRNLGDVXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYIDD--VSDKNENMSRGI 765
            PQAVV+YRN  DV                   RIV KLKKFGY+DD   +D+NE   + +
Sbjct: 97   PQAVVDYRNADDVSDAEEGTSTSTGVSTMQ--RIVAKLKKFGYLDDDAAADENEAGRQIV 154

Query: 766  EKGSIEDIFYVEEGLLPNTRGGFSEEFPFGD----ARSNGEVRFPWEKKA-PNEQXXXXX 930
            EKGS+EDIF VEEGLLPN+RGG S EFPFGD     + +  VRFPWEKK  PN Q     
Sbjct: 155  EKGSVEDIFSVEEGLLPNSRGGISHEFPFGDEIVAVKGDVRVRFPWEKKNDPNVQKSSLD 214

Query: 931  XXXXXXXAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKSCEVVRLKV 1110
                   AE TLPESE+ RLRN ALR KNKT+I GAGVTQ++V+AIHEKWK+ EVVRLK+
Sbjct: 215  SRKARSLAESTLPESEVTRLRNLALRTKNKTRIKGAGVTQEIVEAIHEKWKTAEVVRLKI 274

Query: 1111 EGAPALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEISHKS 1290
            EG  ALNM+RMHEILERKTGGLVVWRSG+SV+LYRGV +ED ++KL KRI   N    +S
Sbjct: 275  EGPSALNMKRMHEILERKTGGLVVWRSGSSVALYRGVKFEDTSRKLNKRITGNNGAPRES 334

Query: 1291 PSATNKTRQDSSEFGPLAATDTPQAEPVSTDPDNKYPETSSEVRYEDEIEKLLDSLGPRY 1470
              +  +  Q SSE               + DPD K  +T+S V+YEDE+EKLL+SLGPRY
Sbjct: 335  YRSLERITQGSSELSDDGGKPMEDDASFNGDPDRKIIQTTSYVKYEDEVEKLLESLGPRY 394

Query: 1471 ADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPHFALG 1650
             DWPG+GPLPVDADLLPG + GYQPPFRLLPYGVRSTLG+KEAT LRR+ARGLPPHFALG
Sbjct: 395  EDWPGDGPLPVDADLLPGAIPGYQPPFRLLPYGVRSTLGIKEATTLRRIARGLPPHFALG 454

Query: 1651 RSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKDFLVY 1830
            RSR HQGLAAAMIK+WERSSI KIALKRGVQLTTSE +AEDLKRLTGG+LLSRNK++LV+
Sbjct: 455  RSRNHQGLAAAMIKVWERSSIAKIALKRGVQLTTSEWIAEDLKRLTGGMLLSRNKEYLVF 514

Query: 1831 YRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAEETDESRTAGTLRETL 2010
            YRGKDFLSPDVAE LLEKERLAK LQDEEERAR R S  V P+A   D    AGTL+ETL
Sbjct: 515  YRGKDFLSPDVAEALLEKERLAKTLQDEEERARLRASAFVAPTA---DGPADAGTLKETL 571

Query: 2011 DSDTRWGKQLDDDHKEKVMREAEVLRHANLVRKLEKKLDFAEKKLTKAERALSKVEESLN 2190
            D+DTRWGK+LDD HKEKVMREAE+LRHAN+VRKLE KLD AE+KL KAERAL KVE+SLN
Sbjct: 572  DADTRWGKRLDDVHKEKVMREAEILRHANIVRKLESKLDLAERKLAKAERALFKVEKSLN 631

Query: 2191 PADRVEDPESLSDEERFMFRKLGLRMKAXXXXXXXXXXXXTVENMHLHWKYRELVKIIVK 2370
            PA+  +DPE+++DEERFMFRKLGLRMKA            TVENMHLHWKYRELVKIIVK
Sbjct: 632  PAEPEKDPEAITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVK 691

Query: 2371 AQNIEEVKNIALSLEAESGGVLVSVDKISKGYAIIVFRGRDYKRPSLLRPKNLLTKRKAL 2550
            A  IEE K IAL+LEAESGGVLVS+DKISKG+AIIV+RGRDYKRP LLRPKNLLTKRKAL
Sbjct: 692  APKIEEAKTIALALEAESGGVLVSLDKISKGFAIIVYRGRDYKRPPLLRPKNLLTKRKAL 751

Query: 2551 ARSIELQRHQ 2580
            ARSIELQRHQ
Sbjct: 752  ARSIELQRHQ 761


>ref|XP_002517017.1| conserved hypothetical protein [Ricinus communis]
            gi|223543652|gb|EEF45180.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 773

 Score =  905 bits (2340), Expect = 0.0
 Identities = 475/743 (63%), Positives = 570/743 (76%), Gaps = 17/743 (2%)
 Frame = +1

Query: 688  RIVEKLKKFGYID---DVSDKNENMSRGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGD 858
            +IVEKLKK GYID   D   K + + R I+KGS+EDIFYVEEG LPN+RGGFS+E P G 
Sbjct: 3    KIVEKLKKHGYIDGNVDEKKKEKTLERVIQKGSVEDIFYVEEGNLPNSRGGFSKESPLGV 62

Query: 859  A---RSNGEVRFPWEK----KAPNEQXXXXXXXXXXXXAELTLPESELRRLRNFALRIKN 1017
                +SNGEVRFPWEK    +  +E+            AELTLPESELRRLRN   +IK+
Sbjct: 63   EDVFKSNGEVRFPWEKPKREELEHEKKWTARSKSRTQLAELTLPESELRRLRNLTYQIKS 122

Query: 1018 KTKIGGAGVTQQVVDAIHEKWKSCEVVRLKVEGAPALNMRRMHEILERKTGGLVVWRSGT 1197
            K ++ GAGVTQ+VVD+IH++WK+ E+VR+KVEGAPALNMRRMHEILERKTGGLV+WRSGT
Sbjct: 123  KVRVKGAGVTQEVVDSIHDRWKTSEIVRVKVEGAPALNMRRMHEILERKTGGLVIWRSGT 182

Query: 1198 SVSLYRGVTYEDPAQKLKKRILRKNEISHKSPSATNKTRQDSSEFGPLAATDTPQAEPVS 1377
            SVSLYRGV+YEDP+ +L K+IL++NE+S+ S S      +  S+    +  + P     S
Sbjct: 183  SVSLYRGVSYEDPSVQLNKQILKRNELSNNSLSTATGIIRSPSKSAASSDLNMPHLNSDS 242

Query: 1378 T--DPDNKYPETSSEVRYEDEIEKLLDSLGPRYADWPGEGPLPVDADLLPGVVAGYQPPF 1551
            T    + K  E  +EV+YEDE++KLL+ LGPRY DW G  PLPVDAD+LPG++ GYQPPF
Sbjct: 243  TAEGEEKKEIEMETEVKYEDEVDKLLEGLGPRYTDWAGLDPLPVDADMLPGIIPGYQPPF 302

Query: 1552 RLLPYGVRSTLGMKEATALRRLARGLPPHFALGRSRQHQGLAAAMIKLWERSSIVKIALK 1731
            R+LPYGVRS+LG KEAT+LRRLAR LPPHFALGRSRQ QGLA AMIKLWE+SSI KI+LK
Sbjct: 303  RILPYGVRSSLGQKEATSLRRLARILPPHFALGRSRQLQGLADAMIKLWEKSSIAKISLK 362

Query: 1732 RGVQLTTSERMAEDLKRLTGGVLLSRNKDFLVYYRGKDFLSPDVAEVLLEKERLAKALQD 1911
            RGVQLTTSERMAED+K+LTGG+LLSRNKDFLV+YRGKDFLSP+V E L+E+ERLA++LQD
Sbjct: 363  RGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKDFLSPEVTEALVERERLAQSLQD 422

Query: 1912 EEERARSRTSFLVTPSAEETDESRTAGTLRETLDSDTRWGKQLDDDHKEKVMREAEVLRH 2091
            +EE+AR R S L   +AE  ++  TAGTL ETLD+D RWGK LD +H+EK+MREAE+ RH
Sbjct: 423  KEEQARLRASALFVQTAETLEQPGTAGTLEETLDADARWGKCLDQNHREKIMREAEIARH 482

Query: 2092 ANLVRKLEKKLDFAEKKLTKAERALSKVEESLNPADRVEDPESLSDEERFMFRKLGLRMK 2271
            ANLVRKLE KL FAEKKL KAERALSKVE  L PA+R  DPES++DEERFMFRKLGLRMK
Sbjct: 483  ANLVRKLESKLAFAEKKLMKAERALSKVEVFLKPAERQADPESITDEERFMFRKLGLRMK 542

Query: 2272 AXXXXXXXXXXXXTVENMHLHWKYRELVKIIVKAQNIEEVKNIALSLEAESGGVLVSVDK 2451
            A            TVENMHLHWKYRELVKII+KA+NIE+VK IAL+LEAESGG+LVSVD+
Sbjct: 543  AFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKNIEQVKKIALALEAESGGILVSVDR 602

Query: 2452 ISKGYAIIVFRGRDYKRPSLLRPKNLLTKRKALARSIELQRHQALLHHISTIETRVNQLR 2631
            +SKGYAIIVFRG+DY+RPS LRP NLLTKRKALARSIE+QR +ALL HIS ++ +V+++R
Sbjct: 603  VSKGYAIIVFRGKDYQRPSKLRPGNLLTKRKALARSIEIQRSEALLKHISALQKKVDKIR 662

Query: 2632 SEIEQMAAVKDQGDEQLYNKLDLAYPTXXXXXXXXXXXTYLETYDSENEMVDGNKDS--- 2802
             EI QM  VKDQGDE+LY++LD  YPT            YL  Y S+ +      D    
Sbjct: 663  YEIAQMEKVKDQGDEELYDRLDATYPTDDDDTEEEEDEAYLGAYISKGDANSAADDETGG 722

Query: 2803 -APNAYLETNFPYDFQ-EESETE 2865
               +  LET   YD Q +ESETE
Sbjct: 723  IVHSVRLETGNLYDVQHQESETE 745


>ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
            gi|449504099|ref|XP_004162252.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 874

 Score =  902 bits (2330), Expect = 0.0
 Identities = 505/897 (56%), Positives = 611/897 (68%), Gaps = 19/897 (2%)
 Frame = +1

Query: 235  MAVMPSYQFHPRNTFLMDSFQSSVSKLHVRTALQLFRYSSSFS-TNKQFLCAIHHSSNSN 411
            MA++ S   H  N F  D+FQ+     H+     L +Y SS    N+ F  + +  +   
Sbjct: 1    MALLHSRLCHATNFF--DTFQTEFHSSHI-----LLKYGSSVVFRNRSFCSSFYGLTTDT 53

Query: 412  FTPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGKK 591
            F+              N  S  + +S  P   + N    LS  SW+D W  TAK N  K 
Sbjct: 54   FS--------------NGISYGSLSSRTP-VYRYNLRRNLSRVSWIDRWNETAKRNRPKP 98

Query: 592  PQAVVNYRNLGD-----------VXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYIDDVSD 738
            P+AV++Y +  +                               +IV KLKKFGYIDD  +
Sbjct: 99   PRAVLDYPSSDENEVSISSTGFSKSYRASSRIDDDGRGGSTMEKIVRKLKKFGYIDD-EN 157

Query: 739  KNENMSRGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDAR---SNGEVRFPWEK-KAP 906
            K +   R IEKGS+EDI Y+EEG+LPNTRGGFS+E P GD     S+GEVRFPWEK K  
Sbjct: 158  KEKGEERAIEKGSVEDILYIEEGMLPNTRGGFSKESPMGDENMFGSDGEVRFPWEKPKEK 217

Query: 907  NEQXXXXXXXXXXXXAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKS 1086
             +             A+LTLPE ELRRLRN   + ++K KIGG GVTQ VVD IHEKWKS
Sbjct: 218  EDTHGDSTRRGSASLAQLTLPEPELRRLRNLTFQKRHKMKIGGGGVTQAVVDVIHEKWKS 277

Query: 1087 CEVVRLKVEGAPALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTYEDP-AQKLKKRIL 1263
             E+VRLK+ G PALNM+RMHEILERKTGGLV+WRSGTS+SLYRGV+YE P A +  KRI 
Sbjct: 278  SEIVRLKILGPPALNMKRMHEILERKTGGLVIWRSGTSLSLYRGVSYELPEAPQFNKRIY 337

Query: 1264 RKNEISH-KSPSATNKTRQDSSEFGPLAATDTPQAEPVSTDPDNKYPETSSEVRYEDEIE 1440
            ++NEI+      A+     +SS    + A    +AE            T  +V YEDE+ 
Sbjct: 338  KRNEITALPKTGASTIAPSESSSHRNVYALQQKRAETSIEGEHCSEQLTKVQVNYEDEVN 397

Query: 1441 KLLDSLGPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLA 1620
            KLLD LGPRY DWPG  PLPVDAD+LPGVV  Y+PPFR+LPYGVRS++G+KEATAL+RLA
Sbjct: 398  KLLDGLGPRYTDWPGLDPLPVDADMLPGVVPDYEPPFRILPYGVRSSIGVKEATALKRLA 457

Query: 1621 RGLPPHFALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVL 1800
            R LPPHFALGR+RQ QGLA AM KLWERS I KIALKRGVQLTTSERMAE++K+LTGG+L
Sbjct: 458  RRLPPHFALGRNRQLQGLAIAMTKLWERSLIAKIALKRGVQLTTSERMAEEIKKLTGGML 517

Query: 1801 LSRNKDFLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAEETDES 1980
            LSRNKDFLV+YRGK FLSP+V E LLE+ERLAK+LQD+EE+AR + S  V P  E+T++S
Sbjct: 518  LSRNKDFLVFYRGKSFLSPEVTEALLERERLAKSLQDKEEQARLKASAFVVP-IEKTEQS 576

Query: 1981 RTAGTLRETLDSDTRWGKQLDDDHKEKVMREAEVLRHANLVRKLEKKLDFAEKKLTKAER 2160
             TAG+L ETLD+D RWGK LDD HKE VMREAE LRH +LVRKLE+KL FAE+KL KAER
Sbjct: 577  GTAGSLEETLDADARWGKALDDKHKENVMREAEQLRHTDLVRKLERKLAFAERKLVKAER 636

Query: 2161 ALSKVEESLNPADRVEDPESLSDEERFMFRKLGLRMKAXXXXXXXXXXXXTVENMHLHWK 2340
             L+KVE  + PA R  +P+S+++EERFMFRKLGLRMKA            TVENMHLHWK
Sbjct: 637  TLAKVEAFMTPAKRQAEPDSITEEERFMFRKLGLRMKAFLLLGRREVFDGTVENMHLHWK 696

Query: 2341 YRELVKIIVKAQNIEEVKNIALSLEAESGGVLVSVDKISKGYAIIVFRGRDYKRPSLLRP 2520
            YRELVKI++KA + + VKNIAL LEAESGGVLVS+DK+SKGYAIIV+RG+DYKRPSLLRP
Sbjct: 697  YRELVKIMIKANSFDHVKNIALQLEAESGGVLVSIDKVSKGYAIIVYRGKDYKRPSLLRP 756

Query: 2521 KNLLTKRKALARSIELQRHQALLHHISTIETRVNQLRSEIEQMAAVKDQGDEQLYNKLDL 2700
            KNLLTKRKALARSIELQRH+ALL HIS ++++V +L SEIEQM  VKDQGDE LYN LD 
Sbjct: 757  KNLLTKRKALARSIELQRHEALLKHISAMQSKVGKLNSEIEQMEKVKDQGDEVLYNTLDS 816

Query: 2701 AYPTXXXXXXXXXXXTYLETYDSENEMVDGNKDSAPNAYLETNFPYDFQ-EESETEF 2868
            AYPT           TY E YD ++++ D +   A + YLE +     Q +ESE E+
Sbjct: 817  AYPT-DNDSEDENSDTY-EAYDQDSDVEDEDDIMASDEYLEGDISNGIQVQESEVEY 871


>ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cicer arietinum]
          Length = 838

 Score =  886 bits (2290), Expect = 0.0
 Identities = 488/865 (56%), Positives = 604/865 (69%), Gaps = 17/865 (1%)
 Frame = +1

Query: 235  MAVMPSYQFHPRNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSNF 414
            M+++P+ Q HP     +DSF +S    +   +L+ F Y+ +           + + ++NF
Sbjct: 1    MSLVPTRQLHP----FIDSFHTSSPSFN---SLRFFTYNLT----------TYKTPSTNF 43

Query: 415  TPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTI-TAKPNCGKK 591
            T      K++ +LP+N                       S ++WL +W   ++K N  K 
Sbjct: 44   T-----FKKYPILPRNT---------------------FSTHTWLKHWNQPSSKHNRPKP 77

Query: 592  PQAVVNYRNLGD---VXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYIDDVSDKNENMS-- 756
            P+AV+NYRN G+                       RIVEKLKKFGY DD  D+ ++ +  
Sbjct: 78   PRAVLNYRNSGNGHSSKSHFSSSDDEDNNGGSTMDRIVEKLKKFGYDDDDDDEKKDHNTK 137

Query: 757  -RGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDAR---SNGEVRFPWEKKA-----PN 909
             R IEKGS+EDIFYVEEG+LPNT+GGFS E PFG  R     GEVRFPWEKK        
Sbjct: 138  ERVIEKGSVEDIFYVEEGILPNTKGGFSSESPFGVGRFGSDGGEVRFPWEKKTVVDDEEE 197

Query: 910  EQXXXXXXXXXXXXAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKSC 1089
            E             AELTLPESEL+RL       K+KT+IGG GVTQ VVD IHE+WK+ 
Sbjct: 198  EDRKGLRKKSKTSLAELTLPESELKRLLKLTFEKKHKTRIGGGGVTQAVVDKIHERWKTS 257

Query: 1090 EVVRLKVEGAPALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTYEDPAQKLKKRILRK 1269
            E+VRLK EG  ALNM+RMHEILERKTGGLV+WRSG SVSLYRGV+Y+DP+ +  K++ RK
Sbjct: 258  EIVRLKFEGDAALNMKRMHEILERKTGGLVIWRSGNSVSLYRGVSYKDPSIQHNKQLYRK 317

Query: 1270 NEISHKSPSA-TNKTRQDSSEFGPLAATDTPQAEPVSTDPDNKYPETSSEVRYEDEIEKL 1446
            +E S K  S  +N      SE    + T+T   +  ST+ D K  +   ++ YEDE++KL
Sbjct: 318  SENSSKFLSKPSNNFAVKPSELTSNSETNTSLEKLESTN-DQKEKDNLPKLTYEDEVDKL 376

Query: 1447 LDSLGPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARG 1626
            LD LGPRY DWPG  PLPVDAD+LP  V GYQPPFR+LP+GVR TLG+KEAT+LRR+ARG
Sbjct: 377  LDGLGPRYTDWPGCEPLPVDADMLPPTVPGYQPPFRVLPFGVRPTLGLKEATSLRRIARG 436

Query: 1627 LPPHFALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLS 1806
            LPPHFALGR+RQ QGLAAAMIKLWE+SSI K+ALKRGVQLTTSERMAE++K+LTGG +LS
Sbjct: 437  LPPHFALGRNRQLQGLAAAMIKLWEKSSIAKVALKRGVQLTTSERMAEEIKKLTGGTILS 496

Query: 1807 RNKDFLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAEETDES-R 1983
            RNKDFLV++RGK FLS DV E LLE+ER+AKA+QDEEE+AR R S L+ P+   ++ S  
Sbjct: 497  RNKDFLVFFRGKSFLSSDVTEALLERERMAKAMQDEEEQARLRASSLLIPAINTSELSVA 556

Query: 1984 TAGTLRETLDSDTRWGKQLDDDHKEKVMREAEVLRHANLVRKLEKKLDFAEKKLTKAERA 2163
             AGTL ETLD+D +WGK LD+ HK+KVMRE E LRHANLVRKLE+KL  AE+K+ +AE+A
Sbjct: 557  EAGTLGETLDADAKWGKTLDERHKQKVMREVEQLRHANLVRKLEQKLSLAERKIMRAEKA 616

Query: 2164 LSKVEESLNPADRVEDPESLSDEERFMFRKLGLRMKAXXXXXXXXXXXXTVENMHLHWKY 2343
            L KVEESL P++   DPES++DEERFMFRKLGLRMKA            TVENMHLHWKY
Sbjct: 617  LMKVEESLKPSENTADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKY 676

Query: 2344 RELVKIIVKAQNIEEVKNIALSLEAESGGVLVSVDKISKGYAIIVFRGRDYKRPSLLRPK 2523
            REL+KIIVKA+N E+VK IAL+LEAESGGVLVSVDK+SKGY+I+V+RG+DY+RPS LRPK
Sbjct: 677  RELIKIIVKAKNFEQVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYQRPSTLRPK 736

Query: 2524 NLLTKRKALARSIELQRHQALLHHISTIETRVNQLRSEIEQMAAVKDQGDEQLYNKLDLA 2703
            NLLTKRKALARSIELQRH+AL  HIST+++ + +LRSEIEQM  VK++GDE LYNKLD A
Sbjct: 737  NLLTKRKALARSIELQRHEALSTHISTLQSNMEKLRSEIEQMEKVKEEGDEALYNKLDSA 796

Query: 2704 YPTXXXXXXXXXXXTYLETYDSENE 2778
            Y T              E Y+SE++
Sbjct: 797  YSTDDDNSEVEDGEEGDEIYNSEDD 821


>gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 878

 Score =  884 bits (2284), Expect = 0.0
 Identities = 493/897 (54%), Positives = 614/897 (68%), Gaps = 17/897 (1%)
 Frame = +1

Query: 235  MAVMPSYQFHPRNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSS-NSN 411
            MA++PS QF+P + F           LH  T ++ FRY SS +  K  L +  +SS NS+
Sbjct: 1    MALVPSRQFYPTSFF---------DSLH-GTHIKFFRYGSSITFRKHRLYSTKYSSVNSS 50

Query: 412  FTPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGKK 591
             +  +NP  ++N           + +   N+  +     LS  SW++ W  T +    K 
Sbjct: 51   SSSEQNPGGKYNKF---------FRTTQNNNWHNKYDDNLSSTSWIEKWNETHQQIRPKP 101

Query: 592  PQAVVNYRNLGDVXXXXXXXXXXXXXXXXXXX----RIVEKLKKFGYIDDVSD--KNENM 753
            P AV++YRN                           RIVEKLKKFGY+DDV    K +  
Sbjct: 102  PGAVLDYRNSESGNQPRSSYANRNGGDNNSGGSTMERIVEKLKKFGYMDDVGSEGKEDKG 161

Query: 754  SRGIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGD----ARSNGEVRFPWEK--KAPNEQ 915
             R IEKGS+EDIFYVEEG+LPN RGGFS + P G       + GEVRFPWEK  +   ++
Sbjct: 162  ERVIEKGSVEDIFYVEEGMLPNPRGGFSPDSPLGVEGVFGGNGGEVRFPWEKPKEKVEKE 221

Query: 916  XXXXXXXXXXXXAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKSCEV 1095
                        AELTLPESELRRLRN   + K+KT+IGGAGVTQ+VVD IHE+WK+ E+
Sbjct: 222  GGSMRRRSKTSLAELTLPESELRRLRNLTFQKKHKTRIGGAGVTQEVVDMIHERWKTLEI 281

Query: 1096 VRLKVEGAPALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTYEDPAQKLKKRILRKNE 1275
            VRLK+EGAPALNM+RMHEILERKTGGLVVWRSGTS+SLYRGV+Y+ P+ +LKKR+ +K E
Sbjct: 282  VRLKIEGAPALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYQVPSLELKKRLYKKPE 341

Query: 1276 ISHKSPSATNKTRQDSSEFGPLAATDTPQAEPVSTDPDNKYPETSSEVRYEDEIEKLLDS 1455
            IS    +  +K+ +D ++F P   TDT   +  S   + K  E S EV+YEDEI+K+LD 
Sbjct: 342  IS-SIQTVGDKSTRDLAKFAPDTNTDTAIEKSESPSQEKKDVERSPEVKYEDEIDKILDG 400

Query: 1456 LGPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPP 1635
            LGPRY DWPG    PVDAD+LP +V GYQPPFR+LP+GVR +LG KEAT+LRRLAR LPP
Sbjct: 401  LGPRYEDWPGSDISPVDADMLPSIVPGYQPPFRILPFGVRPSLGPKEATSLRRLARVLPP 460

Query: 1636 HFALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNK 1815
            HFA+GR+RQ QGLA AMI LWE+S I KIALKRGVQLTTSERM E++K+LTGGVLLSRNK
Sbjct: 461  HFAVGRNRQLQGLAVAMINLWEKSLIAKIALKRGVQLTTSERMVEEIKKLTGGVLLSRNK 520

Query: 1816 DFLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAEETDESRTAGT 1995
            DFLV+YRGK+FLSP+V + LLE+ERLAK+LQDEEE+AR R S ++ P  E T++  +AGT
Sbjct: 521  DFLVFYRGKNFLSPEVTKALLERERLAKSLQDEEEQARLRASAIIVPRTEVTEQPGSAGT 580

Query: 1996 LRETLDSDTRWGKQLDDDHKEKVMREAEVLRHANLVRKLEKKLDFAEKKLTKAERALSKV 2175
            L ETLD++ +WGK+LD+ HK++VMR+AE+ RHANLVRKLEKKL F+E+KL KAERAL+KV
Sbjct: 581  LGETLDANAKWGKRLDNRHKKEVMRQAEISRHANLVRKLEKKLAFSERKLMKAERALAKV 640

Query: 2176 EESLNPADRVEDPESLSDEERFMFRKLGLRMKAXXXXXXXXXXXXTVENMHLHWKYRELV 2355
            E+ L PA+R  DPES+++EERFMFRKLGLRMKA            TVENMHLHWKYREL+
Sbjct: 641  EQFLQPANRQADPESITNEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELI 700

Query: 2356 KIIVKAQNIEEVKNIALSLEAESGGVLVSVDKIS-KGYAIIVFRGRDYKRPSLLRPKNLL 2532
            KI+V A+  ++V+ +AL+LEAESGGVLVSVDKIS K +AIIVFRG+DY+RPS LRPKNLL
Sbjct: 701  KIVVNARTFDQVRKVALALEAESGGVLVSVDKISKKKFAIIVFRGKDYQRPSTLRPKNLL 760

Query: 2533 TKRKALARSIELQRHQALLHHISTIETRVNQLRSEIEQMAAVKDQGDEQLYNKLDLAYPT 2712
            TKRKALARSIELQR +                    EQMA V+DQGDE LY+KLD  YPT
Sbjct: 761  TKRKALARSIELQRQE--------------------EQMAIVEDQGDEALYDKLDFDYPT 800

Query: 2713 ---XXXXXXXXXXXTYLETYDSENEMVDGNKDSAPNAYLETNFPYDFQEESETEFAE 2874
                           YLETY SE++  D + D   N Y +     D + ++ETE  E
Sbjct: 801  SDEEDEESEEEGDEAYLETYGSESDGEDESDDLIRNLYQD----QDEKPQTETEVPE 853


>ref|XP_003590782.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
            truncatula] gi|355479830|gb|AES61033.1| Chloroplastic
            group IIA intron splicing facilitator CRS1 [Medicago
            truncatula]
          Length = 838

 Score =  879 bits (2272), Expect = 0.0
 Identities = 489/869 (56%), Positives = 601/869 (69%), Gaps = 13/869 (1%)
 Frame = +1

Query: 235  MAVMPSYQFHPRNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSNF 414
            MA++P+ Q HP        F +S +  H   +++ F   SS S  K F+           
Sbjct: 1    MALLPTRQLHP--------FHTSPNFHH---SIRFFTTISSSSIQKSFI----------- 38

Query: 415  TPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGKKP 594
               K P K F  L  +KN I +         KS C      ++WL  W    +P   K P
Sbjct: 39   --FKTPTKNFTYL-SSKNPIFHL--------KSFCT-----DTWLKRWNEQNRP---KPP 79

Query: 595  QAVVNYRNLGD--VXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYIDDVSDKNENMSRG-- 762
            + V+NY+  G+                      RIVEKLKKFGY    SD+NEN+     
Sbjct: 80   RGVLNYQGSGNGHSSKSDFDSSDDEDFGGSRMDRIVEKLKKFGY---ESDENENIKEEGV 136

Query: 763  IEKGSIEDIFYVEEGLLPNTRGGFSEEFPFG----DARSNGEVRFPWEKKAPNEQXXXXX 930
            IEKGS+EDIFYVEEG+LPNTRGGFS E PFG     +   GEVRFPWEK   +E+     
Sbjct: 137  IEKGSMEDIFYVEEGMLPNTRGGFSPESPFGIGSYGSGDGGEVRFPWEKPVVDEEVEERT 196

Query: 931  XXXXXXX---AELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKSCEVVR 1101
                      AELTLPESELRRL       K+KT+IGG GVTQ  VD IHE+WK+ E+VR
Sbjct: 197  SSRKKSKTSMAELTLPESELRRLLKLTFMKKHKTRIGGGGVTQAAVDKIHERWKTSEIVR 256

Query: 1102 LKVEGAPALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEIS 1281
            LK EG  ALNM+RMHEILE+KTGGLV+WRSG SVSLYRGV+Y+DP+ +  K++ RKNE S
Sbjct: 257  LKFEGDAALNMKRMHEILEKKTGGLVIWRSGNSVSLYRGVSYKDPSIQQNKQLYRKNEKS 316

Query: 1282 HKSPSATNKTRQ-DSSEFGPLAATDTPQAEPVSTDPDNKYPETSSEVRYEDEIEKLLDSL 1458
             K  SA +   + + SEF   + T T   +  ST+ D K      ++ YEDE++KLLD L
Sbjct: 317  LKFLSAPSDDFEVEPSEFTTDSETKTSLEKLESTN-DQKEKVNLPKISYEDEVDKLLDGL 375

Query: 1459 GPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPH 1638
            GPRY DWPG  PLPVDAD+LP  V GYQPPFR+LP+GVR TLG KEAT+LRR+ARGLPPH
Sbjct: 376  GPRYTDWPGCEPLPVDADMLPPTVPGYQPPFRVLPFGVRPTLGFKEATSLRRIARGLPPH 435

Query: 1639 FALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKD 1818
            FALGR+RQ QGLAAAMIKLWE+SSI K+ALKRGVQLTTSERMAE++K+LTGG++LSRNKD
Sbjct: 436  FALGRNRQLQGLAAAMIKLWEKSSIAKVALKRGVQLTTSERMAEEIKKLTGGIILSRNKD 495

Query: 1819 FLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAEETDESRTAGTL 1998
            FLV+YRGK+FLSPDV + LLE+E++AK++QDEEE+AR R S L+ P+   ++ S  AGTL
Sbjct: 496  FLVFYRGKNFLSPDVTQALLEREKMAKSMQDEEEQARLRASSLILPAINTSELSAEAGTL 555

Query: 1999 RETLDSDTRWGKQLDDDHKEKVMREAEVLRHANLVRKLEKKLDFAEKKLTKAERALSKVE 2178
             ETLD+D +WGK LD+ H++KVMRE E LRHAN+VRKLE+KL  AE+K+ +AERAL KVE
Sbjct: 556  GETLDADAKWGKTLDECHEQKVMREVEQLRHANIVRKLEEKLSLAERKIRRAERALMKVE 615

Query: 2179 ESLNPADRVEDPESLSDEERFMFRKLGLRMKAXXXXXXXXXXXXTVENMHLHWKYRELVK 2358
             SL P++   DPES++DEERFMFRKLGLRMKA            T+ENMHLHWKYRELVK
Sbjct: 616  VSLKPSETRADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVK 675

Query: 2359 IIVKAQNIEEVKNIALSLEAESGGVLVSVDKISKGYAIIVFRGRDYKRPSLLRPKNLLTK 2538
            IIVKA N E VK IAL+LEAESGGVLVSVDK+SKGY+I+V+RG+DY+RPS+LRPKNLLTK
Sbjct: 676  IIVKANNFEHVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYQRPSMLRPKNLLTK 735

Query: 2539 RKALARSIELQRHQALLHHISTIETRVNQLRSEIEQMAAVKDQGDEQLYNKLDLAYPTXX 2718
            RKALARSIELQRH+AL  HIST++++V +LRSEIEQ+  VK++GDE LYN+LD AY T  
Sbjct: 736  RKALARSIELQRHEALSSHISTLQSKVEKLRSEIEQIEKVKEEGDEALYNRLDSAYSTDD 795

Query: 2719 XXXXXXXXXTYLETY-DSENEMVDGNKDS 2802
                       +E Y  S+N+  D   +S
Sbjct: 796  DNSEAEDEEEEVEAYLQSDNDENDSEVES 824


>ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 835

 Score =  862 bits (2226), Expect = 0.0
 Identities = 479/876 (54%), Positives = 592/876 (67%), Gaps = 15/876 (1%)
 Frame = +1

Query: 235  MAVMPSYQFHPRNTFLMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNSNF 414
            MA++P+  F        DSF SS +   +R    LFR+S + S N  FL          F
Sbjct: 1    MALVPTRPF-------FDSFHSSPNFHSLRFCNSLFRHSLTPSPNSTFL-----RRKPLF 48

Query: 415  TPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGKKP 594
                NP K F+                            +   WL  W      +   KP
Sbjct: 49   IFRCNPAKSFS----------------------------TDKHWLKRWNDPTNNHARPKP 80

Query: 595  Q-AVVNYRNLGDVXXXXXXXXXXXXXXXXXXX----RIVEKLKKFGYIDDVSDKNENMSR 759
              AV++Y   G                         RIVEKLKKFGY++D     +N  R
Sbjct: 81   PCAVLDYSENGHASKSGLASSDEEGGDGNTGGSTMDRIVEKLKKFGYVEDGI---QNKER 137

Query: 760  GIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDAR---SNGEVRFPWEKKAPNE--QXXX 924
             IEKGS+EDIFYVEEG+LPN+RGGFS E P G       + EVRFPWEK    E  +   
Sbjct: 138  VIEKGSVEDIFYVEEGMLPNSRGGFSSESPLGFGSFGSDDREVRFPWEKPVVEELEERKS 197

Query: 925  XXXXXXXXXAELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKSCEVVRL 1104
                     AELTLPESEL+RL       K+KT+IG +GVTQ VVD IHE+WK+ E+VRL
Sbjct: 198  MRSRSKTSLAELTLPESELKRLLKLTFEKKHKTRIGRSGVTQAVVDKIHERWKTSEIVRL 257

Query: 1105 KVEGAPALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTYEDPAQKLKKRILRKNEISH 1284
            K EG  ALNM+RMHEILERKTGGLV+WRSG SVSLYRGV+YE P+ +  K+I RK+E S 
Sbjct: 258  KFEGEAALNMKRMHEILERKTGGLVIWRSGNSVSLYRGVSYEVPSVQQNKKIYRKSENSS 317

Query: 1285 KS-PSATNKTRQDSSEFGPLAATDTPQAEPVSTDPDNKYPETSSEVRYEDEIEKLLDSLG 1461
            K  P+ +  +  + S+    + T  P A+  ST+ D K  +   +V YE E++KLLD LG
Sbjct: 318  KLLPTPSYNSVGNPSDIASNSGTSAPLAKLESTN-DEKERDYLPKVNYEHEVDKLLDGLG 376

Query: 1462 PRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPPHF 1641
            PRY DWPG  PLPVDAD+LP  V GYQPPFR+LP+GVR+TLG++EATALRR+AR LPPHF
Sbjct: 377  PRYTDWPGCDPLPVDADMLPVTVPGYQPPFRVLPFGVRATLGLREATALRRIARTLPPHF 436

Query: 1642 ALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNKDF 1821
            ALGR+RQ QGLA AMIKLWE SSI K+ALKRGVQLTTSERMAE++K+LTGG+LLSRNKDF
Sbjct: 437  ALGRNRQLQGLAVAMIKLWEISSIAKVALKRGVQLTTSERMAEEIKKLTGGILLSRNKDF 496

Query: 1822 LVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSRTSFLVTPSAEETDESRTAGTLR 2001
            LV++RGK+FLS DV + LLE+ER+AK +QDEEE+AR R S L+ P+   ++ S  AGTL 
Sbjct: 497  LVFFRGKNFLSADVTQALLERERMAKVMQDEEEQARLRASSLLIPTNNTSELSAEAGTLG 556

Query: 2002 ETLDSDTRWGKQLDDDHKEKVMREAEVLRHANLVRKLEKKLDFAEKKLTKAERALSKVEE 2181
            ETLD+D +WGK LD+ HK+K+MRE E LRHANLV+KLE+KL FAE+KL +AE+AL KVE 
Sbjct: 557  ETLDADAKWGKTLDERHKQKIMREVEQLRHANLVKKLEQKLSFAERKLRRAEKALMKVES 616

Query: 2182 SLNPADRVEDPESLSDEERFMFRKLGLRMKAXXXXXXXXXXXXTVENMHLHWKYRELVKI 2361
             L P++   DPES++DEERFMFRKLGLRMKA            T+ENMHLHWKYRELVKI
Sbjct: 617  FLKPSEYKADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKI 676

Query: 2362 IVKAQNIEEVKNIALSLEAESGGVLVSVDKISKGYAIIVFRGRDYKRPSLLRPKNLLTKR 2541
            IVKA+  E+VK IAL+LEAESGGVLVSVDK+SKGY++IV+RG+DY+RPS LRPKNLLTKR
Sbjct: 677  IVKAKTFEQVKKIALALEAESGGVLVSVDKVSKGYSVIVYRGKDYQRPSTLRPKNLLTKR 736

Query: 2542 KALARSIELQRHQALLHHISTIETRVNQLRSEIEQMAAVKDQGDEQLYNKLDLAYPT--- 2712
            KALARSIELQRH+AL++HIST++++V ++RSEIEQM  VKD+GDE LY+KLD AYP+   
Sbjct: 737  KALARSIELQRHEALMNHISTLQSKVGRIRSEIEQMEKVKDKGDEALYDKLDSAYPSDDE 796

Query: 2713 -XXXXXXXXXXXTYLETYDSENEMVDGNKDSAPNAY 2817
                         YL+TY+SEN+    ++  + N Y
Sbjct: 797  NSEVEDGEQGDEAYLKTYNSENDSEIESEVESDNMY 832


>ref|XP_002883397.1| hypothetical protein ARALYDRAFT_898801 [Arabidopsis lyrata subsp.
            lyrata] gi|297329237|gb|EFH59656.1| hypothetical protein
            ARALYDRAFT_898801 [Arabidopsis lyrata subsp. lyrata]
          Length = 873

 Score =  861 bits (2224), Expect = 0.0
 Identities = 484/898 (53%), Positives = 596/898 (66%), Gaps = 18/898 (2%)
 Frame = +1

Query: 235  MAVMPSYQFHPRNTF--LMDSFQSSVSKLHVRTALQLFRYSSSFSTNKQFLCAIHHSSNS 408
            MA+ PS  F+P       + SFQSS          +  RYSSS S      C     S+ 
Sbjct: 1    MAMKPSLHFYPTTVTKKFVYSFQSSFCS-------RFIRYSSSISIGS---CKGVVFSSR 50

Query: 409  NFTPHKNPHKRFNLLPKNKNSICNYASEPPNSQKSNCATILSHNSWLDNWTITAKPNCGK 588
            N+   + P +RF+      N                         WL+NW    K N  K
Sbjct: 51   NY---QIPSRRFSFSRDGNNG-----------------------EWLENWNRIQKRNQPK 84

Query: 589  KPQAVVNYRNLGDVXXXXXXXXXXXXXXXXXXXRIVEKLKKFGYID---DVSDKNENMSR 759
             P+ VVNYR  G +                   +IVEKLKK+GY++   +V +K     R
Sbjct: 85   PPKVVVNYRKEGGIVSGDDNRSRDGEGSTME--KIVEKLKKYGYMEKGEEVQNKEIEQER 142

Query: 760  GIEKGSIEDIFYVEEGLLPNTRGGFSEEFPFGDAR---SNGEVRFPWEKKAPNEQXXXXX 930
             IEKGS+EDIFYVEEG LPNTRGGF+EE   G      SNGEV FPWEK +  E+     
Sbjct: 143  RIEKGSVEDIFYVEEGNLPNTRGGFTEESLLGRDDVFGSNGEVGFPWEKMSAKEKKELEA 202

Query: 931  XXXXXXX-----AELTLPESELRRLRNFALRIKNKTKIGGAGVTQQVVDAIHEKWKSCEV 1095
                        AE+TLPESELRRLRN   R  +K +I GAGVTQ  VDAI EKWKS E+
Sbjct: 203  EWTAKKENRYSLAEMTLPESELRRLRNLTFRTASKMRIRGAGVTQVAVDAIKEKWKSAEI 262

Query: 1096 VRLKVEGAPALNMRRMHEILERKTGGLVVWRSGTSVSLYRGVTYEDPAQKLKKRILRKNE 1275
            VRLK+EGA ALNMR+MHEILE+KTGGLV+WRSGTS+SLYRGV+YE P+ K  K+  R+ E
Sbjct: 263  VRLKIEGASALNMRKMHEILEKKTGGLVIWRSGTSISLYRGVSYELPSGKWNKQ--RREE 320

Query: 1276 ISHKSPSATNKTRQDSSEFGPLAATDTPQAEPVSTDPDNKYPETSSEVRYEDEIEKLLDS 1455
                S   T  T  D+S+         PQ E V+T  + K   +  +V YEDEI++LLD 
Sbjct: 321  TPPSSLPETT-TMVDNSD----GKVHLPQLEQVTTSVEKKDQTSQPDVEYEDEIDELLDG 375

Query: 1456 LGPRYADWPGEGPLPVDADLLPGVVAGYQPPFRLLPYGVRSTLGMKEATALRRLARGLPP 1635
            LGPR+ DWPG+ PLPVDADLLPG + GY+PPFR+LPYGVRS+LG KEATALRRLAR +PP
Sbjct: 376  LGPRFMDWPGDNPLPVDADLLPGAIPGYEPPFRVLPYGVRSSLGPKEATALRRLARSIPP 435

Query: 1636 HFALGRSRQHQGLAAAMIKLWERSSIVKIALKRGVQLTTSERMAEDLKRLTGGVLLSRNK 1815
            HFALGRSRQ QGLA AM++LWE+S + KIA+KRGVQ TTSERMAEDLK+LTGG+LLSRNK
Sbjct: 436  HFALGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSERMAEDLKKLTGGILLSRNK 495

Query: 1816 DFLVYYRGKDFLSPDVAEVLLEKERLAKALQDEEERARSR-TSFLVTPSAEETDESRTAG 1992
            DFLV+YRGK+FLS +VA+ L+E+ER  + LQDEEE+AR R +S L+ P  E   +  +AG
Sbjct: 496  DFLVFYRGKNFLSREVADALVEQERFVRTLQDEEEQARLRGSSALIVPCIEPPKKLVSAG 555

Query: 1993 TLRETLDSDTRWGKQLDDD-HKEKVMREAEVLRHANLVRKLEKKLDFAEKKLTKAERALS 2169
            TL ETLD+  +WGK LDDD H ++V +E E+LRH NLVRKLE+KL FAE+KL KAER L+
Sbjct: 556  TLGETLDATGKWGKNLDDDDHSDEVKQEVEILRHENLVRKLERKLAFAERKLLKAERGLA 615

Query: 2170 KVEESLNPADRVEDPESLSDEERFMFRKLGLRMKAXXXXXXXXXXXXTVENMHLHWKYRE 2349
            KVEE L PA++ EDP+S++DEERFMFRKLGL+MKA            TVENMHLHWKYRE
Sbjct: 616  KVEECLKPAEQREDPDSITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRE 675

Query: 2350 LVKIIVKAQNIEEVKNIALSLEAESGGVLVSVDKISKGYAIIVFRGRDYKRPSLLRPKNL 2529
            LVKIIVKA+  + VK +AL+LEAESGG+LVS+DK++KGYAIIV+RG+DYKRP++LRPKNL
Sbjct: 676  LVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTKGYAIIVYRGKDYKRPTMLRPKNL 735

Query: 2530 LTKRKALARSIELQRHQALLHHISTIETRVNQLRSEIEQMAAVKDQGDEQLYNKLDLAYP 2709
            LTKRKALARSIELQR + LL HIST++ +  QLR+EIEQM  V D+GDE+LYNKLD+AY 
Sbjct: 736  LTKRKALARSIELQRREGLLKHISTMQAKAEQLRAEIEQMEKVTDKGDEELYNKLDMAYA 795

Query: 2710 TXXXXXXXXXXXTYLETY---DSENEMVDGNKDSAPNAYLETNFPYDFQEESETEFAE 2874
            +            + ETY   D    + +G      +   ++N       ESET F +
Sbjct: 796  SSDEETDEEEDDAFPETYAVGDDGEILAEGELSETDDEDWDSN-------ESETGFGD 846