BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00007194
         (672 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ06193.1| hypothetical protein PRUPE_ppa003513mg [Prunus pe...   249   3e-78
ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF,...   243   1e-75
ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...   234   2e-75
emb|CBI32760.3| unnamed protein product [Vitis vinifera]              234   2e-75
gb|EOY07878.1| RNA polymerase sigma factor rpoD, putative [Theob...   233   4e-74
ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF,...   230   9e-74
ref|XP_004246643.1| PREDICTED: RNA polymerase sigma factor sigF,...   228   3e-73
ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protei...   231   2e-72
ref|XP_002326192.1| predicted protein [Populus trichocarpa]           231   2e-72
ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [...   224   2e-71
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,...   225   2e-69
ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,...   225   2e-69
ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF,...   225   2e-69
ref|XP_004143265.1| PREDICTED: RNA polymerase sigma factor sigF,...   215   2e-68
ref|XP_006604578.1| PREDICTED: RNA polymerase sigma factor sigF,...   223   3e-67
ref|XP_006293947.1| hypothetical protein CARUB_v10022939mg [Caps...   218   6e-66
ref|XP_006293948.1| hypothetical protein CARUB_v10022939mg [Caps...   218   6e-66
ref|XP_004493985.1| PREDICTED: RNA polymerase sigma factor sigF,...   220   1e-65
ref|XP_006410876.1| hypothetical protein EUTSA_v10016472mg [Eutr...   216   1e-65
ref|XP_006410875.1| hypothetical protein EUTSA_v10016472mg [Eutr...   216   1e-65

>gb|EMJ06193.1| hypothetical protein PRUPE_ppa003513mg [Prunus persica]
          Length = 568

 Score =  249 bits (637), Expect(2) = 3e-78
 Identities = 117/144 (81%), Positives = 132/144 (91%)
 Frame = +2

Query: 239 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 418
           +L KL+EV+SRL+TQF REPTL+EWAEA G SC +L+SQ+  G SSR+KLIYAN RMVVH
Sbjct: 283 DLFKLEEVKSRLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVH 342

Query: 419 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 598
           IAKQYQGRGL LQDL+QEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQ++RKA+FQHSRT
Sbjct: 343 IAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRT 402

Query: 599 IRLPENVYSLLSKVYEAKKSCVQQ 670
           IRLPENVYSLL KV EAKKSC+Q+
Sbjct: 403 IRLPENVYSLLGKVLEAKKSCIQE 426



 Score = 69.3 bits (168), Expect(2) = 3e-78
 Identities = 33/52 (63%), Positives = 42/52 (80%)
 Frame = +1

Query: 19  RKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQXFTSNLFGVFHVK 174
           +K +EGF+PNDPLR+FLWGPET QLLTAKEE+ELI ++Q    +LF +  VK
Sbjct: 244 KKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQ----DLFKLEEVK 291


>ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 554

 Score =  243 bits (621), Expect(2) = 1e-75
 Identities = 114/144 (79%), Positives = 131/144 (90%)
 Frame = +2

Query: 239 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 418
           ++ KL+ V+SRL++QF REPTL+EWAEA G SC +LQSQ+ CG SSR+KLIY+N RMVVH
Sbjct: 269 DVFKLEAVKSRLQSQFGREPTLIEWAEAVGISCQMLQSQLRCGTSSREKLIYSNLRMVVH 328

Query: 419 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 598
           IAKQYQGRGL LQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWW+RQ+IRKA+FQHSRT
Sbjct: 329 IAKQYQGRGLGLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWVRQTIRKAIFQHSRT 388

Query: 599 IRLPENVYSLLSKVYEAKKSCVQQ 670
           IRLPENVY+LL KV EAKKS +Q+
Sbjct: 389 IRLPENVYTLLGKVLEAKKSYIQE 412



 Score = 66.6 bits (161), Expect(2) = 1e-75
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = +1

Query: 19  RKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQ 135
           RK+ EG +PNDPLR+FLWGPET QLLT KEE+ELI ++Q
Sbjct: 230 RKYREGLNPNDPLRLFLWGPETRQLLTLKEETELIARVQ 268


>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score =  234 bits (598), Expect(2) = 2e-75
 Identities = 111/144 (77%), Positives = 127/144 (88%)
 Frame = +2

Query: 239 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 418
           ELM+L+EV+ RL++   REPT+VEWAEA G SC VLQSQ+H GN SR KLIYAN RMVVH
Sbjct: 287 ELMRLEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVH 346

Query: 419 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 598
           IAKQYQGRGL+LQDLLQEGSMGLM SVEKFKP AGCRFA+YAYWWIRQ++RKA+FQHSRT
Sbjct: 347 IAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRT 406

Query: 599 IRLPENVYSLLSKVYEAKKSCVQQ 670
           IRLPEN+YSLL KV EAK+  +Q+
Sbjct: 407 IRLPENMYSLLGKVKEAKRLFIQE 430



 Score = 75.1 bits (183), Expect(2) = 2e-75
 Identities = 34/45 (75%), Positives = 39/45 (86%)
 Frame = +1

Query: 1   RKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQ 135
           R+ E  RK NEG+DP DPLR+FLWGPET +LLTAKEESELIV+IQ
Sbjct: 242 RRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQ 286


>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  234 bits (598), Expect(2) = 2e-75
 Identities = 111/144 (77%), Positives = 127/144 (88%)
 Frame = +2

Query: 239 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 418
           ELM+L+EV+ RL++   REPT+VEWAEA G SC VLQSQ+H GN SR KLIYAN RMVVH
Sbjct: 276 ELMRLEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVH 335

Query: 419 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 598
           IAKQYQGRGL+LQDLLQEGSMGLM SVEKFKP AGCRFA+YAYWWIRQ++RKA+FQHSRT
Sbjct: 336 IAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRT 395

Query: 599 IRLPENVYSLLSKVYEAKKSCVQQ 670
           IRLPEN+YSLL KV EAK+  +Q+
Sbjct: 396 IRLPENMYSLLGKVKEAKRLFIQE 419



 Score = 75.1 bits (183), Expect(2) = 2e-75
 Identities = 34/45 (75%), Positives = 39/45 (86%)
 Frame = +1

Query: 1   RKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQ 135
           R+ E  RK NEG+DP DPLR+FLWGPET +LLTAKEESELIV+IQ
Sbjct: 231 RRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQ 275


>gb|EOY07878.1| RNA polymerase sigma factor rpoD, putative [Theobroma cacao]
          Length = 568

 Score =  233 bits (595), Expect(2) = 4e-74
 Identities = 109/143 (76%), Positives = 130/143 (90%)
 Frame = +2

Query: 242 LMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHI 421
           LM+L++V+S+L++QF REPTLVEWAEA G  C  LQ+++H GNSSRDKLIYAN RMVVHI
Sbjct: 284 LMRLEKVKSKLQSQFGREPTLVEWAEAIGLRCSALQAELHSGNSSRDKLIYANLRMVVHI 343

Query: 422 AKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTI 601
           AKQYQ RGLSLQDLLQEGSMGLMKSVE+FKPQ GCRFATYAYWWIRQ+IRK++ QHSRT+
Sbjct: 344 AKQYQSRGLSLQDLLQEGSMGLMKSVERFKPQVGCRFATYAYWWIRQTIRKSIMQHSRTV 403

Query: 602 RLPENVYSLLSKVYEAKKSCVQQ 670
           RLPENV++LLSKV +AKKS +++
Sbjct: 404 RLPENVHTLLSKVLDAKKSYIRE 426



 Score = 71.6 bits (174), Expect(2) = 4e-74
 Identities = 32/45 (71%), Positives = 38/45 (84%)
 Frame = +1

Query: 1   RKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQ 135
           R+ +  RK +EGFDPNDPLR+FLWGPET QLLTAKEESEL  ++Q
Sbjct: 238 RRTDVRRKLSEGFDPNDPLRLFLWGPETKQLLTAKEESELSNQVQ 282


>ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Solanum tuberosum]
          Length = 562

 Score =  230 bits (586), Expect(2) = 9e-74
 Identities = 112/142 (78%), Positives = 126/142 (88%)
 Frame = +2

Query: 245 MKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIA 424
           MKLQEV+ +L+ QF+ EPT VEWAEAAG +   L+SQ+  G SSR+KLI AN RMVVHIA
Sbjct: 279 MKLQEVKHQLQIQFAHEPTSVEWAEAAGITSRELKSQLLSGKSSREKLINANLRMVVHIA 338

Query: 425 KQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIR 604
           KQYQGRGL+LQDLLQEGSMGLMKSVEKFKPQAGCRF TYAYWWIRQS+RKA+FQHSRTIR
Sbjct: 339 KQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYAYWWIRQSVRKAIFQHSRTIR 398

Query: 605 LPENVYSLLSKVYEAKKSCVQQ 670
           LPENVY+LLSKV +AKK C+QQ
Sbjct: 399 LPENVYALLSKVKDAKKECIQQ 420



 Score = 73.9 bits (180), Expect(2) = 9e-74
 Identities = 35/44 (79%), Positives = 37/44 (84%)
 Frame = +1

Query: 4   KPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQ 135
           +P+  RK NE  D NDPLRMFLWGPET QLLTAKEESELIVKIQ
Sbjct: 233 RPDVRRKVNESIDLNDPLRMFLWGPETKQLLTAKEESELIVKIQ 276


>ref|XP_004246643.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Solanum lycopersicum]
          Length = 563

 Score =  228 bits (581), Expect(2) = 3e-73
 Identities = 110/142 (77%), Positives = 127/142 (89%)
 Frame = +2

Query: 245 MKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIA 424
           MKLQEV+ +L+ QF+REPT +EWAEAAG +   L+SQ+  G SSR+KLI AN RMVVHIA
Sbjct: 280 MKLQEVKHQLQIQFAREPTSLEWAEAAGITSRELKSQLLSGKSSREKLINANLRMVVHIA 339

Query: 425 KQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIR 604
           KQYQGRGL+LQDLLQEGSMGLMKSVEKFKPQAGCRF TYAYWWIRQS+RKA+FQHSRTIR
Sbjct: 340 KQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYAYWWIRQSVRKAIFQHSRTIR 399

Query: 605 LPENVYSLLSKVYEAKKSCVQQ 670
           LPENVY+LLSKV +AK+ C++Q
Sbjct: 400 LPENVYALLSKVKDAKRECIRQ 421



 Score = 73.9 bits (180), Expect(2) = 3e-73
 Identities = 35/44 (79%), Positives = 37/44 (84%)
 Frame = +1

Query: 4   KPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQ 135
           +P+  RK NE  D NDPLRMFLWGPET QLLTAKEESELIVKIQ
Sbjct: 234 RPDVRRKVNESIDLNDPLRMFLWGPETKQLLTAKEESELIVKIQ 277


>ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protein [Populus trichocarpa]
           gi|550336129|gb|ERP59223.1| RNA POLYMERASE SIGMA-70
           FACTOR family protein [Populus trichocarpa]
          Length = 535

 Score =  231 bits (588), Expect(2) = 2e-72
 Identities = 109/144 (75%), Positives = 127/144 (88%)
 Frame = +2

Query: 239 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 418
           +LM L+ V++RLE+QF REPTLVEWA+A G SCHVL+ Q+H GN SR+KLI AN RMVVH
Sbjct: 250 DLMNLEGVKNRLESQFGREPTLVEWAQAVGLSCHVLKLQLHSGNRSREKLINANLRMVVH 309

Query: 419 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 598
           IAK+YQ RGL LQDLLQEG++GLMKS+EKFKPQAGCRFATYAYWWIRQ+I KA+FQHSRT
Sbjct: 310 IAKRYQNRGLGLQDLLQEGTVGLMKSIEKFKPQAGCRFATYAYWWIRQTITKAIFQHSRT 369

Query: 599 IRLPENVYSLLSKVYEAKKSCVQQ 670
           IRLPENVY LL KV EAK+S +Q+
Sbjct: 370 IRLPENVYGLLGKVMEAKRSYIQE 393



 Score = 68.9 bits (167), Expect(2) = 2e-72
 Identities = 33/54 (61%), Positives = 41/54 (75%)
 Frame = +1

Query: 1   RKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQXFTSNLFGV 162
           +  +  ++ ++GFDPNDPLR+FLWGPET QLLTAKEE ELI +IQ    NL GV
Sbjct: 205 KSADVQKRLSQGFDPNDPLRLFLWGPETKQLLTAKEEFELIAQIQDL-MNLEGV 257


>ref|XP_002326192.1| predicted protein [Populus trichocarpa]
          Length = 535

 Score =  231 bits (588), Expect(2) = 2e-72
 Identities = 109/144 (75%), Positives = 127/144 (88%)
 Frame = +2

Query: 239 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 418
           +LM L+ V++RLE+QF REPTLVEWA+A G SCHVL+ Q+H GN SR+KLI AN RMVVH
Sbjct: 250 DLMNLEGVKNRLESQFGREPTLVEWAQAVGLSCHVLKLQLHSGNRSREKLINANLRMVVH 309

Query: 419 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 598
           IAK+YQ RGL LQDLLQEG++GLMKS+EKFKPQAGCRFATYAYWWIRQ+I KA+FQHSRT
Sbjct: 310 IAKRYQNRGLGLQDLLQEGTVGLMKSIEKFKPQAGCRFATYAYWWIRQTITKAIFQHSRT 369

Query: 599 IRLPENVYSLLSKVYEAKKSCVQQ 670
           IRLPENVY LL KV EAK+S +Q+
Sbjct: 370 IRLPENVYGLLGKVMEAKRSYIQE 393



 Score = 68.9 bits (167), Expect(2) = 2e-72
 Identities = 33/54 (61%), Positives = 41/54 (75%)
 Frame = +1

Query: 1   RKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQXFTSNLFGV 162
           +  +  ++ ++GFDPNDPLR+FLWGPET QLLTAKEE ELI +IQ    NL GV
Sbjct: 205 KSADIQKRLSQGFDPNDPLRLFLWGPETKQLLTAKEEFELIAQIQDL-MNLEGV 257


>ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223541372|gb|EEF42923.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 548

 Score =  224 bits (571), Expect(2) = 2e-71
 Identities = 106/144 (73%), Positives = 123/144 (85%)
 Frame = +2

Query: 239 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 418
           +LM L+ V+ + + QF R+PTLVEWA+A G S  V+QSQ+H GN SR+KLI AN RMVVH
Sbjct: 263 DLMSLENVKEKFKLQFGRDPTLVEWADAVGLSYSVMQSQLHSGNRSREKLINANLRMVVH 322

Query: 419 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 598
           IAKQYQGRGLSLQDLLQEGSMGLMKS+EKFKPQ GCRFATYAYWWIRQ++RKA+FQHSRT
Sbjct: 323 IAKQYQGRGLSLQDLLQEGSMGLMKSIEKFKPQVGCRFATYAYWWIRQTVRKAIFQHSRT 382

Query: 599 IRLPENVYSLLSKVYEAKKSCVQQ 670
           IRLPENVY  L KV EAK+S + +
Sbjct: 383 IRLPENVYHTLGKVSEAKRSYIME 406



 Score = 71.6 bits (174), Expect(2) = 2e-71
 Identities = 33/49 (67%), Positives = 38/49 (77%)
 Frame = +1

Query: 1   RKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQXFTS 147
           R+    +K NEGFDP DPLR+FLWGPET QLLTAKEESELI ++Q   S
Sbjct: 218 RRAGVQKKINEGFDPKDPLRLFLWGPETKQLLTAKEESELIGQVQDLMS 266


>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X1 [Citrus sinensis]
          Length = 570

 Score =  225 bits (573), Expect(2) = 2e-69
 Identities = 102/144 (70%), Positives = 130/144 (90%)
 Frame = +2

Query: 239 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 418
           +L++L++ +S+L++QF REPTL+EWA+A G SC  L+S++H GNSSR+KLI AN R+VVH
Sbjct: 285 DLIRLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVH 344

Query: 419 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 598
           +AKQYQGRG+ L DLLQEGSMGLMKSVEKFKPQAGCRFA+YAYWW+RQ+IRKA+FQHSRT
Sbjct: 345 VAKQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRT 404

Query: 599 IRLPENVYSLLSKVYEAKKSCVQQ 670
           IRLPEN+Y+LLS+V EAK+  +Q+
Sbjct: 405 IRLPENIYTLLSRVLEAKRLYIQE 428



 Score = 64.7 bits (156), Expect(2) = 2e-69
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = +1

Query: 1   RKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQ 135
           RK    +K +EGFD NDPLR+FLWGPET +LLTA EE ELI +IQ
Sbjct: 240 RKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQ 284


>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X2 [Citrus sinensis]
          Length = 569

 Score =  225 bits (573), Expect(2) = 2e-69
 Identities = 102/144 (70%), Positives = 130/144 (90%)
 Frame = +2

Query: 239 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 418
           +L++L++ +S+L++QF REPTL+EWA+A G SC  L+S++H GNSSR+KLI AN R+VVH
Sbjct: 284 DLIRLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVH 343

Query: 419 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 598
           +AKQYQGRG+ L DLLQEGSMGLMKSVEKFKPQAGCRFA+YAYWW+RQ+IRKA+FQHSRT
Sbjct: 344 VAKQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRT 403

Query: 599 IRLPENVYSLLSKVYEAKKSCVQQ 670
           IRLPEN+Y+LLS+V EAK+  +Q+
Sbjct: 404 IRLPENIYTLLSRVLEAKRLYIQE 427



 Score = 64.7 bits (156), Expect(2) = 2e-69
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = +1

Query: 1   RKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQ 135
           RK    +K +EGFD NDPLR+FLWGPET +LLTA EE ELI +IQ
Sbjct: 239 RKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQ 283


>ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X3 [Citrus sinensis]
          Length = 561

 Score =  225 bits (573), Expect(2) = 2e-69
 Identities = 102/144 (70%), Positives = 130/144 (90%)
 Frame = +2

Query: 239 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 418
           +L++L++ +S+L++QF REPTL+EWA+A G SC  L+S++H GNSSR+KLI AN R+VVH
Sbjct: 276 DLIRLEKEKSKLQSQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVH 335

Query: 419 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 598
           +AKQYQGRG+ L DLLQEGSMGLMKSVEKFKPQAGCRFA+YAYWW+RQ+IRKA+FQHSRT
Sbjct: 336 VAKQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRT 395

Query: 599 IRLPENVYSLLSKVYEAKKSCVQQ 670
           IRLPEN+Y+LLS+V EAK+  +Q+
Sbjct: 396 IRLPENIYTLLSRVLEAKRLYIQE 419



 Score = 64.7 bits (156), Expect(2) = 2e-69
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = +1

Query: 1   RKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQ 135
           RK    +K +EGFD NDPLR+FLWGPET +LLTA EE ELI +IQ
Sbjct: 231 RKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQ 275


>ref|XP_004143265.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Cucumis sativus] gi|449482444|ref|XP_004156283.1|
           PREDICTED: RNA polymerase sigma factor sigF,
           chloroplastic-like [Cucumis sativus]
          Length = 562

 Score =  215 bits (547), Expect(2) = 2e-68
 Identities = 106/143 (74%), Positives = 120/143 (83%)
 Frame = +2

Query: 239 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 418
           +LM L  V++RL++QF REPTLVEWAEA G +C  LQSQ+H   +SR+KLI AN RMVVH
Sbjct: 277 DLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQTSREKLINANLRMVVH 336

Query: 419 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 598
           IAKQYQGRGLSL DLLQ GS+GLMKSVEKFKPQAGCRF +YAYWWIR SI KA+FQHSRT
Sbjct: 337 IAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRT 396

Query: 599 IRLPENVYSLLSKVYEAKKSCVQ 667
           IRLPENVY+LL KV EAK   V+
Sbjct: 397 IRLPENVYALLGKVTEAKNYFVR 419



 Score = 70.9 bits (172), Expect(2) = 2e-68
 Identities = 33/45 (73%), Positives = 39/45 (86%)
 Frame = +1

Query: 1   RKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQ 135
           R  +S RK +E FDPNDPLR+FLWGPET +LLTA+EESELIV+IQ
Sbjct: 232 RGKDSRRKTSEKFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQ 276


>ref|XP_006604578.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Glycine max]
          Length = 554

 Score =  223 bits (568), Expect(2) = 3e-67
 Identities = 102/144 (70%), Positives = 123/144 (85%)
 Frame = +2

Query: 239 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 418
           +L +L+EV+ RL+TQ  REPTL EWA+A G SC+ LQ+Q+HC N S++KL +AN RMVVH
Sbjct: 269 DLSRLEEVKIRLQTQLRREPTLAEWADAVGHSCYALQTQLHCANRSKEKLFHANLRMVVH 328

Query: 419 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 598
           IAK YQGRGLSLQDL QEGS GLMKS+EKFKP+AGCRF TYAYWWIR ++RKA+F HSRT
Sbjct: 329 IAKHYQGRGLSLQDLFQEGSTGLMKSIEKFKPEAGCRFGTYAYWWIRHAVRKAIFLHSRT 388

Query: 599 IRLPENVYSLLSKVYEAKKSCVQQ 670
           IRLPEN+Y+LL KV EAKKS +Q+
Sbjct: 389 IRLPENLYTLLGKVIEAKKSYIQE 412



 Score = 58.9 bits (141), Expect(2) = 3e-67
 Identities = 26/45 (57%), Positives = 35/45 (77%)
 Frame = +1

Query: 1   RKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQ 135
           R+    +K  EG+DPNDPLR+FL GPE+ QLLT +EES+LI ++Q
Sbjct: 224 RRLRLEKKLKEGYDPNDPLRLFLSGPESRQLLTREEESQLITQLQ 268


>ref|XP_006293947.1| hypothetical protein CARUB_v10022939mg [Capsella rubella]
           gi|482562655|gb|EOA26845.1| hypothetical protein
           CARUB_v10022939mg [Capsella rubella]
          Length = 547

 Score =  218 bits (555), Expect(2) = 6e-66
 Identities = 105/143 (73%), Positives = 126/143 (88%)
 Frame = +2

Query: 242 LMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHI 421
           L+KL++V+++LE+Q   EPT+ EWAEA G S  VL+S++H G SSR+KLI AN R+VVHI
Sbjct: 263 LLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSEIHRGRSSREKLITANLRLVVHI 322

Query: 422 AKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTI 601
           AKQYQ RGL+ QDLLQEGSMGLMKSVEKFKPQ+GCRFATYAYWWIRQSIRK++FQ+SRTI
Sbjct: 323 AKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNSRTI 382

Query: 602 RLPENVYSLLSKVYEAKKSCVQQ 670
           RLPENVY LL KV EA+K+CVQ+
Sbjct: 383 RLPENVYMLLGKVSEARKTCVQE 405



 Score = 59.7 bits (143), Expect(2) = 6e-66
 Identities = 27/45 (60%), Positives = 35/45 (77%)
 Frame = +1

Query: 1   RKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQ 135
           +K  + +KF +G D +D L++FLWGPET QLLTAKEE+ELI  IQ
Sbjct: 217 QKSNAKKKFKQGVDTDDALQLFLWGPETKQLLTAKEEAELISHIQ 261


>ref|XP_006293948.1| hypothetical protein CARUB_v10022939mg [Capsella rubella]
           gi|482562656|gb|EOA26846.1| hypothetical protein
           CARUB_v10022939mg [Capsella rubella]
          Length = 456

 Score =  218 bits (555), Expect(2) = 6e-66
 Identities = 105/143 (73%), Positives = 126/143 (88%)
 Frame = +2

Query: 242 LMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHI 421
           L+KL++V+++LE+Q   EPT+ EWAEA G S  VL+S++H G SSR+KLI AN R+VVHI
Sbjct: 263 LLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSEIHRGRSSREKLITANLRLVVHI 322

Query: 422 AKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTI 601
           AKQYQ RGL+ QDLLQEGSMGLMKSVEKFKPQ+GCRFATYAYWWIRQSIRK++FQ+SRTI
Sbjct: 323 AKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNSRTI 382

Query: 602 RLPENVYSLLSKVYEAKKSCVQQ 670
           RLPENVY LL KV EA+K+CVQ+
Sbjct: 383 RLPENVYMLLGKVSEARKTCVQE 405



 Score = 59.7 bits (143), Expect(2) = 6e-66
 Identities = 27/45 (60%), Positives = 35/45 (77%)
 Frame = +1

Query: 1   RKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQ 135
           +K  + +KF +G D +D L++FLWGPET QLLTAKEE+ELI  IQ
Sbjct: 217 QKSNAKKKFKQGVDTDDALQLFLWGPETKQLLTAKEEAELISHIQ 261


>ref|XP_004493985.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X1 [Cicer arietinum]
          Length = 555

 Score =  220 bits (560), Expect(2) = 1e-65
 Identities = 101/144 (70%), Positives = 124/144 (86%)
 Frame = +2

Query: 239 ELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVH 418
           +L++L+E   +L++QF REPTL EWA+  G SC  LQ+++HCGN S+DKLI AN R+VVH
Sbjct: 270 DLLRLKETNIKLQSQFGREPTLAEWADGVGLSCRALQARLHCGNRSKDKLINANLRLVVH 329

Query: 419 IAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRT 598
           IAK YQGRGLSLQDLLQEGSMGLM+ VEKFKP+AGCRF+TYAYWWIRQ+IR+ALF HS+T
Sbjct: 330 IAKYYQGRGLSLQDLLQEGSMGLMRGVEKFKPKAGCRFSTYAYWWIRQTIRRALFLHSKT 389

Query: 599 IRLPENVYSLLSKVYEAKKSCVQQ 670
           IRLPEN Y+LL KV EAKKS +++
Sbjct: 390 IRLPENFYTLLGKVTEAKKSYIKE 413



 Score = 56.6 bits (135), Expect(2) = 1e-65
 Identities = 25/45 (55%), Positives = 33/45 (73%)
 Frame = +1

Query: 1   RKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQ 135
           R+    +K  EG + NDPLR+FLWGPET +LL  +EES+LI +IQ
Sbjct: 225 RRLRIEKKLKEGLEGNDPLRLFLWGPETKRLLNLEEESKLIAQIQ 269


>ref|XP_006410876.1| hypothetical protein EUTSA_v10016472mg [Eutrema salsugineum]
           gi|312282671|dbj|BAJ34201.1| unnamed protein product
           [Thellungiella halophila] gi|557112045|gb|ESQ52329.1|
           hypothetical protein EUTSA_v10016472mg [Eutrema
           salsugineum]
          Length = 547

 Score =  216 bits (551), Expect(2) = 1e-65
 Identities = 104/142 (73%), Positives = 125/142 (88%)
 Frame = +2

Query: 242 LMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHI 421
           L+KL++V+++LE+Q   EPT+ EWAEA G S  VL+S++H G SSR+KLI AN R+VVHI
Sbjct: 263 LIKLEKVKTKLESQNGCEPTIGEWAEAMGLSSPVLKSEIHRGRSSREKLITANLRLVVHI 322

Query: 422 AKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTI 601
           AKQYQ RGL+ QDLLQEGSMGLMKSVEKFKPQ+GCRFATYAYWWIRQSIRK++FQ+SRTI
Sbjct: 323 AKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNSRTI 382

Query: 602 RLPENVYSLLSKVYEAKKSCVQ 667
           RLPENVY LL KV EA+K+C+Q
Sbjct: 383 RLPENVYMLLGKVSEARKTCIQ 404



 Score = 60.1 bits (144), Expect(2) = 1e-65
 Identities = 27/45 (60%), Positives = 35/45 (77%)
 Frame = +1

Query: 1   RKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQ 135
           +K  + +K  +GFD +D L++FLWGPET QLLTAKEE+ELI  IQ
Sbjct: 217 QKINAKKKMKQGFDTDDALQLFLWGPETKQLLTAKEEAELIAHIQ 261


>ref|XP_006410875.1| hypothetical protein EUTSA_v10016472mg [Eutrema salsugineum]
           gi|557112044|gb|ESQ52328.1| hypothetical protein
           EUTSA_v10016472mg [Eutrema salsugineum]
          Length = 546

 Score =  216 bits (551), Expect(2) = 1e-65
 Identities = 104/142 (73%), Positives = 125/142 (88%)
 Frame = +2

Query: 242 LMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHI 421
           L+KL++V+++LE+Q   EPT+ EWAEA G S  VL+S++H G SSR+KLI AN R+VVHI
Sbjct: 262 LIKLEKVKTKLESQNGCEPTIGEWAEAMGLSSPVLKSEIHRGRSSREKLITANLRLVVHI 321

Query: 422 AKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTI 601
           AKQYQ RGL+ QDLLQEGSMGLMKSVEKFKPQ+GCRFATYAYWWIRQSIRK++FQ+SRTI
Sbjct: 322 AKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNSRTI 381

Query: 602 RLPENVYSLLSKVYEAKKSCVQ 667
           RLPENVY LL KV EA+K+C+Q
Sbjct: 382 RLPENVYMLLGKVSEARKTCIQ 403



 Score = 60.1 bits (144), Expect(2) = 1e-65
 Identities = 27/45 (60%), Positives = 35/45 (77%)
 Frame = +1

Query: 1   RKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQ 135
           +K  + +K  +GFD +D L++FLWGPET QLLTAKEE+ELI  IQ
Sbjct: 216 QKINAKKKMKQGFDTDDALQLFLWGPETKQLLTAKEEAELIAHIQ 260