BLASTX nr result

ID: Rehmannia22_contig00007064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00007064
         (341 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containi...    73   3e-11
ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containi...    73   3e-11
ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containi...    73   4e-11
emb|CBI21484.3| unnamed protein product [Vitis vinifera]               73   4e-11
ref|XP_002310592.2| pentatricopeptide repeat-containing family p...    72   6e-11
ref|XP_004306202.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
gb|EPS61204.1| hypothetical protein M569_13595 [Genlisea aurea]        70   3e-10
ref|XP_004987089.1| PREDICTED: pentatricopeptide repeat-containi...    70   3e-10
ref|XP_006354721.1| PREDICTED: pentatricopeptide repeat-containi...    69   5e-10
ref|XP_006404655.1| hypothetical protein EUTSA_v10000053mg [Eutr...    69   5e-10
ref|XP_006296049.1| hypothetical protein CARUB_v10025197mg [Caps...    69   5e-10
ref|XP_002878586.1| pentatricopeptide repeat-containing protein ...    69   5e-10
ref|NP_179798.1| pentatricopeptide repeat-containing protein [Ar...    69   5e-10
gb|ESW15249.1| hypothetical protein PHAVU_007G057100g [Phaseolus...    69   6e-10
ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [S...    69   6e-10
ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containi...    69   6e-10
ref|NP_001141725.1| hypothetical protein [Zea mays] gi|194705708...    69   6e-10
ref|XP_006428089.1| hypothetical protein CICLE_v10027512mg [Citr...    69   8e-10
ref|XP_004496732.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09
ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [S...    68   1e-09

>ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = +3

Query: 3   IKFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           IKFISKLV REIIVRDATRFHHFK+GSCSCRDYW
Sbjct: 749 IKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782


>ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = +3

Query: 3   IKFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           IKFISKLV REIIVRDATRFHHFK+GSCSCRDYW
Sbjct: 749 IKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782


>ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 32/34 (94%), Positives = 32/34 (94%)
 Frame = +3

Query: 3   IKFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           IKFISKLV REIIVRDATRFHHFKNG CSCRDYW
Sbjct: 752 IKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785


>emb|CBI21484.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 32/34 (94%), Positives = 32/34 (94%)
 Frame = +3

Query: 3   IKFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           IKFISKLV REIIVRDATRFHHFKNG CSCRDYW
Sbjct: 557 IKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 590


>ref|XP_002310592.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550334248|gb|EEE91042.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 785

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 31/34 (91%), Positives = 34/34 (100%)
 Frame = +3

Query: 3   IKFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           IKFISKLV+REIIVRDATRFHHFK+GSCSC+DYW
Sbjct: 752 IKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 785


>ref|XP_004306202.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070-like
            [Fragaria vesca subsp. vesca]
          Length = 1013

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 30/34 (88%), Positives = 32/34 (94%)
 Frame = +3

Query: 3    IKFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
            IKFISKLV REII+RD TRFHHFKNG+CSCRDYW
Sbjct: 980  IKFISKLVGREIILRDTTRFHHFKNGTCSCRDYW 1013


>gb|EPS61204.1| hypothetical protein M569_13595 [Genlisea aurea]
          Length = 811

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = +3

Query: 6   KFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           KFISKLV REI+VRDATRFHHF++GSCSCRDYW
Sbjct: 779 KFISKLVGREIVVRDATRFHHFRDGSCSCRDYW 811


>ref|XP_004987089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Setaria italica]
          Length = 636

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = +3

Query: 3   IKFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           IKFIS++V REIIVRD+ RFHHFKNGSCSCRDYW
Sbjct: 603 IKFISRIVQREIIVRDSNRFHHFKNGSCSCRDYW 636


>ref|XP_006354721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Solanum tuberosum]
          Length = 786

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   IKFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           IKFISKLV REII+RDATRFHHFK G CSCRDYW
Sbjct: 753 IKFISKLVGREIILRDATRFHHFKGGFCSCRDYW 786


>ref|XP_006404655.1| hypothetical protein EUTSA_v10000053mg [Eutrema salsugineum]
           gi|557105783|gb|ESQ46108.1| hypothetical protein
           EUTSA_v10000053mg [Eutrema salsugineum]
          Length = 785

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   IKFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           IKFISKLV REIIVRD TRFHHFK+G CSCRDYW
Sbjct: 752 IKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 785


>ref|XP_006296049.1| hypothetical protein CARUB_v10025197mg [Capsella rubella]
           gi|482564757|gb|EOA28947.1| hypothetical protein
           CARUB_v10025197mg [Capsella rubella]
          Length = 795

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   IKFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           IKFISKLV REIIVRD TRFHHFK+G CSCRDYW
Sbjct: 762 IKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 795


>ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297324425|gb|EFH54845.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 786

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   IKFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           IKFISKLV REIIVRD TRFHHFK+G CSCRDYW
Sbjct: 753 IKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786


>ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g22070 gi|4587589|gb|AAD25817.1| hypothetical protein
           [Arabidopsis thaliana] gi|330252165|gb|AEC07259.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 786

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   IKFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           IKFISKLV REIIVRD TRFHHFK+G CSCRDYW
Sbjct: 753 IKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786


>gb|ESW15249.1| hypothetical protein PHAVU_007G057100g [Phaseolus vulgaris]
          Length = 786

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = +3

Query: 3   IKFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           IK+ISKLV REIIVRD TRFHHFK+GSCSC+DYW
Sbjct: 753 IKYISKLVKREIIVRDTTRFHHFKDGSCSCQDYW 786


>ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
           gi|241922063|gb|EER95207.1| hypothetical protein
           SORBIDRAFT_01g041740 [Sorghum bicolor]
          Length = 635

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   IKFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           IK ISK+V REIIVRD+ RFHHFKNGSCSCRDYW
Sbjct: 602 IKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635


>ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera] gi|296081235|emb|CBI17979.3| unnamed
           protein product [Vitis vinifera]
          Length = 742

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = +3

Query: 6   KFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           K ISKLVNREI+VRDA RFHHFKNG CSCRDYW
Sbjct: 710 KLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742


>ref|NP_001141725.1| hypothetical protein [Zea mays] gi|194705708|gb|ACF86938.1| unknown
           [Zea mays] gi|413956425|gb|AFW89074.1| hypothetical
           protein ZEAMMB73_742653 [Zea mays]
          Length = 635

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   IKFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           IK ISK+V REIIVRD+ RFHHFKNGSCSCRDYW
Sbjct: 602 IKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635


>ref|XP_006428089.1| hypothetical protein CICLE_v10027512mg [Citrus clementina]
           gi|568819548|ref|XP_006464311.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g22070-like [Citrus sinensis]
           gi|557530079|gb|ESR41329.1| hypothetical protein
           CICLE_v10027512mg [Citrus clementina]
          Length = 785

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   IKFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           IKFI KLV+REI+VRDATRFHHFK G CSCRDYW
Sbjct: 752 IKFICKLVDREIVVRDATRFHHFKKGLCSCRDYW 785


>ref|XP_004496732.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cicer arietinum]
          Length = 782

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = +3

Query: 3   IKFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           IK+IS LV REIIVRDATRFHHFK+GSCSC+DYW
Sbjct: 749 IKYISVLVGREIIVRDATRFHHFKDGSCSCQDYW 782


>ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
           gi|241917662|gb|EER90806.1| hypothetical protein
           SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 28/34 (82%), Positives = 33/34 (97%)
 Frame = +3

Query: 3   IKFISKLVNREIIVRDATRFHHFKNGSCSCRDYW 104
           IKFISK+V+REIIVRDATRFHHF++G CSC+DYW
Sbjct: 770 IKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803


Top