BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00006736
         (623 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA73042.1| polyprotein [Ananas comosus]                          234   1e-59
gb|ABA95071.1| retrotransposon protein, putative, Ty3-gypsy subc...   230   3e-58
gb|ABA95101.1| retrotransposon protein, putative, Ty3-gypsy subc...   220   3e-55
gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]              220   3e-55
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e...   219   6e-55
gb|AAM01169.1|AC113336_21 Putative retroelement [Oryza sativa Ja...   219   6e-55
emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]                218   1e-54
gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subc...   218   1e-54
gb|ABA91203.1| retrotransposon protein, putative, Ty3-gypsy subc...   217   2e-54
dbj|BAH80066.1| putative retrotransposon protein [Oryza sativa I...   217   2e-54
emb|CAH66749.1| H0409D10.7 [Oryza sativa Indica Group]                217   2e-54
emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa Indica Group]           217   2e-54
emb|CAH66284.1| OSIGBa0161P06.1 [Oryza sativa Indica Group]           216   3e-54
dbj|BAH80025.1| putative retrotransposon protein [Oryza sativa I...   216   4e-54
emb|CAH66139.1| H0616A11.3 [Oryza sativa Indica Group]                216   5e-54
gb|ABB47441.1| retrotransposon protein, putative, Ty3-gypsy subc...   215   7e-54
emb|CAD40393.3| OSJNBa0004L19.12 [Oryza sativa Japonica Group]        215   7e-54
emb|CAD40396.3| OSJNBa0004L19.15 [Oryza sativa Japonica Group]        215   7e-54
gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subc...   215   9e-54
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   215   9e-54

>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score =  234 bits (597), Expect = 1e-59
 Identities = 118/205 (57%), Positives = 144/205 (70%)
 Frame = -2

Query: 619 NYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKDY 440
           NYPTHDLELAAVV ALK+WRHYLYG +CE++TDHKSLKYLFTQKELN+RQRRWLEL+KDY
Sbjct: 348 NYPTHDLELAAVVFALKLWRHYLYGERCEVYTDHKSLKYLFTQKELNLRQRRWLELLKDY 407

Query: 439 DCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLAS 260
           D TI YHPGKANVVADALSRK+             L+ +   L++E++TP   T   L +
Sbjct: 408 DLTILYHPGKANVVADALSRKSMENLAMHVVTQPRLIEQMKRLELEIVTP--DTPMRLMT 465

Query: 259 LVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXXX 80
           LVV PTL +RIKE Q  D  L K+KG++ +G    F +  DG++ + GR+CVP       
Sbjct: 466 LVVQPTLLDRIKEKQASDVELQKIKGKMVDGCTGDFTLDGDGLMRFRGRICVPADSGIKE 525

Query: 79  XXXXEAHCTPYTAHPGGTKMYRDLR 5
               EAH  PY  HPGGTKMY+DL+
Sbjct: 526 DILQEAHRAPYAIHPGGTKMYKDLK 550


>gb|ABA95071.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1122

 Score =  230 bits (586), Expect = 3e-58
 Identities = 114/207 (55%), Positives = 143/207 (69%)
 Frame = -2

Query: 622  LNYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKD 443
            +NYPTHDLELAAVVHALKIWRHYL G +CEI+TDHKSLKY+FTQ ELNMRQRRWLEL+KD
Sbjct: 632  VNYPTHDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSELNMRQRRWLELIKD 691

Query: 442  YDCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLA 263
            Y+  I+YHPGKAN+VADALSRKT C           L RE   LK+ ++         LA
Sbjct: 692  YNLGIHYHPGKANMVADALSRKTYCATALVWPTQDNLCREIEKLKLTMVPTGN-----LA 746

Query: 262  SLVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXX 83
            SL V PTL  +I+EAQ  D+ + +MKG++R+  +KGF + D   + +  R+CVP      
Sbjct: 747  SLTVQPTLETQIREAQQEDEGMKEMKGKIRKKRLKGFTIDDQDTVWFGSRICVPARKELK 806

Query: 82   XXXXXEAHCTPYTAHPGGTKMYRDLRE 2
                 EAH + Y+ HPG TKMY+D++E
Sbjct: 807  DLILREAHESAYSIHPGSTKMYQDIKE 833


>gb|ABA95101.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1651

 Score =  220 bits (560), Expect = 3e-55
 Identities = 110/206 (53%), Positives = 139/206 (67%)
 Frame = -2

Query: 622  LNYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKD 443
            +NYPTHDLELAAV+HALKIWRHYL G +CEI+T+HKSLKY+FTQ ELNMRQRRWLEL+KD
Sbjct: 1099 VNYPTHDLELAAVIHALKIWRHYLIGNRCEIYTNHKSLKYIFTQSELNMRQRRWLELIKD 1158

Query: 442  YDCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLA 263
            Y+  I+YHPGKANVVADALSRK  C           L RE   LK+ V+         LA
Sbjct: 1159 YNFGIHYHPGKANVVADALSRKPYCATALVWPTQDDLCREVEKLKLTVVPTGN-----LA 1213

Query: 262  SLVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXX 83
            SL V PTL  +I+EAQ  D  + +MK ++R+  +KGF + +   + +  R+CVP      
Sbjct: 1214 SLAVQPTLEAQIREAQSDDGIMKEMKDKIRKKRLKGFTIDNQDTVWFGSRICVPAKKELK 1273

Query: 82   XXXXXEAHCTPYTAHPGGTKMYRDLR 5
                 EAH + Y+ HPG TKMY+D++
Sbjct: 1274 DLILREAHESAYSIHPGSTKMYQDIK 1299


>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
          Length = 2037

 Score =  220 bits (560), Expect = 3e-55
 Identities = 113/206 (54%), Positives = 138/206 (66%), Gaps = 1/206 (0%)
 Frame = -2

Query: 619  NYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKDY 440
            NYPTHDLE+ AV+ ALKIWRHYLYG  CEIFTDHKSLKY+F Q++LN+RQRRW+EL+KDY
Sbjct: 1823 NYPTHDLEMTAVIFALKIWRHYLYGETCEIFTDHKSLKYIFQQRDLNLRQRRWMELLKDY 1882

Query: 439  DCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRS-TKAVLA 263
            DCTI+YHPGKANVVADALSRK+             L+RE   L  E +    S   A++A
Sbjct: 1883 DCTIHYHPGKANVVADALSRKSSGSLAHIQEVRRPLIRELHELVDEGVRFDLSEAGAMIA 1942

Query: 262  SLVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXX 83
               V   L ++IK AQ +D  L +++  V +G   GFV+ DD VL Y+ RLCVP      
Sbjct: 1943 HFQVKSDLFDKIKAAQKKDDSLLRIRNEVEQGKAAGFVIGDDDVLRYKDRLCVPDVDDLR 2002

Query: 82   XXXXXEAHCTPYTAHPGGTKMYRDLR 5
                 EAH T YT HPG TKMY+DL+
Sbjct: 2003 RELMVEAHQTVYTVHPGSTKMYKDLK 2028


>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1053

 Score =  219 bits (557), Expect = 6e-55
 Identities = 109/206 (52%), Positives = 137/206 (66%)
 Frame = -2

Query: 619  NYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKDY 440
            NYPTHDLELAA+VHALKIWRHYL G +CEIFTDHKSLKY+FTQ ELN+RQRRWLEL+KDY
Sbjct: 455  NYPTHDLELAAIVHALKIWRHYLIGNRCEIFTDHKSLKYIFTQSELNLRQRRWLELIKDY 514

Query: 439  DCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLAS 260
            D  I+YHPGKANVVADALSRK  C           L  E   L +E++      +  + +
Sbjct: 515  DLGIHYHPGKANVVADALSRKAYCNTILVQKNQPELYEELKHLNLEIV-----NQGCVNA 569

Query: 259  LVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXXX 80
            L V PTL+ +I+E Q  D+ + ++K  +R G   GF   + G + +  R+CVP       
Sbjct: 570  LEVQPTLQSQIREKQLEDEDIKEIKKNMRRGKAPGFSEDEQGTVWFGNRICVPNQQELKQ 629

Query: 79   XXXXEAHCTPYTAHPGGTKMYRDLRE 2
                EAH +PY+ HPG TKMY+DL+E
Sbjct: 630  SILKEAHESPYSIHPGSTKMYQDLKE 655


>gb|AAM01169.1|AC113336_21 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1449

 Score =  219 bits (557), Expect = 6e-55
 Identities = 110/206 (53%), Positives = 140/206 (67%)
 Frame = -2

Query: 619  NYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKDY 440
            NYPTHDLELAAVVHALKIWRHYLYG + E++TDHKSLKY+FTQ +LNMRQRRWLEL+KDY
Sbjct: 843  NYPTHDLELAAVVHALKIWRHYLYGNRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDY 902

Query: 439  DCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLAS 260
            D  I+YHPGKANVVADALSRK+ C           L +EF  L + ++     +K  +A+
Sbjct: 903  DMEIHYHPGKANVVADALSRKSYCNMSEGRCLPWELCQEFEKLNLGIV-----SKGFVAA 957

Query: 259  LVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXXX 80
            L   PTL ++I+EAQ  D ++ ++K  +R G   GFV  + G +    R+CVP       
Sbjct: 958  LEAKPTLFDQIREAQVNDPYIQEIKKNMRRGKAIGFVEDEQGTVWLGERICVPENKELKD 1017

Query: 79   XXXXEAHCTPYTAHPGGTKMYRDLRE 2
                EAH T Y+ HPG TKMY+DL++
Sbjct: 1018 TIMKEAHETLYSIHPGSTKMYQDLKQ 1043


>emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]
          Length = 1481

 Score =  218 bits (554), Expect = 1e-54
 Identities = 111/206 (53%), Positives = 139/206 (67%)
 Frame = -2

Query: 619  NYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKDY 440
            NYPTHDLELAAVVHALKIWRHYLYG + EI+TDHKSLKY+FTQ +LNMRQRRWLEL+KDY
Sbjct: 875  NYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDY 934

Query: 439  DCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLAS 260
            D  I+YHPGKANVVADALSRK+ C           L +EF  L + ++     +K  +A+
Sbjct: 935  DMEIHYHPGKANVVADALSRKSYCNMSEGRSLPWELCQEFEKLNLGIV-----SKGFMAA 989

Query: 259  LVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXXX 80
            L   PTL ++I+EAQ  D  + ++K  +R G   GFV  + G +    R+CVP       
Sbjct: 990  LEAKPTLFDQIREAQVNDPDIQEIKKNMRRGKAVGFVEDEQGTVWLGERICVPENKELKV 1049

Query: 79   XXXXEAHCTPYTAHPGGTKMYRDLRE 2
                EAH T Y+ HPG TKMY+DL++
Sbjct: 1050 TIMKEAHETLYSIHPGSTKMYQDLKQ 1075


>gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1759

 Score =  218 bits (554), Expect = 1e-54
 Identities = 110/206 (53%), Positives = 138/206 (66%)
 Frame = -2

Query: 622  LNYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKD 443
            +NYPTHDLELAAVVHALKIWRHYL G +CE++TDHKSLKY+FTQ ELNMRQRRWLEL+KD
Sbjct: 1163 VNYPTHDLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKD 1222

Query: 442  YDCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLA 263
            YD  I+YHPGKANVVADALSRKT C           L R+   L++ V+        V A
Sbjct: 1223 YDLGIHYHPGKANVVADALSRKTYCNVDQIRPDQDRLCRDLEKLRLTVV-----QSGVAA 1277

Query: 262  SLVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXX 83
            SL V PTL  +I++AQ  D+ + ++  R++E     F + D G + Y  R+CVP      
Sbjct: 1278 SLTVQPTLESQIRKAQKDDEGIKELIKRIQEKKDTDFSIDDQGTVWYGPRICVPAKKELR 1337

Query: 82   XXXXXEAHCTPYTAHPGGTKMYRDLR 5
                 EAH + Y+ HPG TKMY+D++
Sbjct: 1338 DLILKEAHESAYSIHPGSTKMYQDIK 1363


>gb|ABA91203.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1718

 Score =  217 bits (553), Expect = 2e-54
 Identities = 112/206 (54%), Positives = 137/206 (66%)
 Frame = -2

Query: 622  LNYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKD 443
            +NYPTHDLELAAVVHALKIWRHYL G +CE++TDHKSLKY+FTQ ELNMRQRRWLEL+KD
Sbjct: 1191 VNYPTHDLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKD 1250

Query: 442  YDCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLA 263
            YD  I+YHPGKANVVADALSRKT C           L RE   LK+ V+        V A
Sbjct: 1251 YDLGIHYHPGKANVVADALSRKTYCNEAQIWPAQDRLCRELEKLKLTVV-----QSGVPA 1305

Query: 262  SLVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXX 83
            SL V PTL  +I+EAQ  D+ + ++  R++E     F + D G +    R+CVP      
Sbjct: 1306 SLTVQPTLESQIREAQKDDEGIKELIKRIQEKKDTDFSIDDQGTVWCGPRICVPAKKELR 1365

Query: 82   XXXXXEAHCTPYTAHPGGTKMYRDLR 5
                 EAH + Y+ HPG TKMY+D++
Sbjct: 1366 NLILKEAHESAYSIHPGSTKMYQDIK 1391


>dbj|BAH80066.1| putative retrotransposon protein [Oryza sativa Indica Group]
          Length = 937

 Score =  217 bits (553), Expect = 2e-54
 Identities = 110/206 (53%), Positives = 140/206 (67%)
 Frame = -2

Query: 619 NYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKDY 440
           NYPTHDLELAAVVHALKIWRHYLYG + E++TDHKSLKY+FTQ +LNMRQRRWLEL+KDY
Sbjct: 361 NYPTHDLELAAVVHALKIWRHYLYGNRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDY 420

Query: 439 DCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLAS 260
           D  I+YHPGKANVVADALSRK+ C           L +EF  L + ++     +K  +A+
Sbjct: 421 DMEIHYHPGKANVVADALSRKSYCNVSEGRCLPWELCQEFERLNLGIV-----SKGFVAA 475

Query: 259 LVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXXX 80
           L   PTL ++I+EAQ  D  + ++K  +R G   GFV  + G++    R+CVP       
Sbjct: 476 LEAKPTLFDQIREAQVNDPDIQEIKKNMRRGKAIGFVEDEQGIVWLGERICVPENKGLKD 535

Query: 79  XXXXEAHCTPYTAHPGGTKMYRDLRE 2
               EAH T Y+ HPG TKMY+DL++
Sbjct: 536 TIMKEAHETLYSIHPGSTKMYQDLKQ 561


>emb|CAH66749.1| H0409D10.7 [Oryza sativa Indica Group]
          Length = 1641

 Score =  217 bits (552), Expect = 2e-54
 Identities = 111/206 (53%), Positives = 139/206 (67%)
 Frame = -2

Query: 619  NYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKDY 440
            NYPTHDLELAAVVHALKIWRHYLYG + EI+TDHKSLKY+FTQ +LNMRQRRWLEL+KDY
Sbjct: 1035 NYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDY 1094

Query: 439  DCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLAS 260
            D  I+YHPGKANVVADALSRK+ C           L +EF  L + ++     +K  +A+
Sbjct: 1095 DMEIHYHPGKANVVADALSRKSYCNMSEGRCLPWELCQEFEKLNLGIV-----SKGFVAA 1149

Query: 259  LVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXXX 80
            L   PTL ++I+EAQ  D  + ++K  +R G   GFV  + G +    R+CVP       
Sbjct: 1150 LEAKPTLFDQIREAQVNDPDIQEIKKNMRRGKAIGFVEDEQGTVWLGERICVPENKELKD 1209

Query: 79   XXXXEAHCTPYTAHPGGTKMYRDLRE 2
                EAH T Y+ HPG TKMY+DL++
Sbjct: 1210 TIMKEAHETLYSIHPGSTKMYQDLKQ 1235


>emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa Indica Group]
          Length = 1433

 Score =  217 bits (552), Expect = 2e-54
 Identities = 111/206 (53%), Positives = 138/206 (66%)
 Frame = -2

Query: 619  NYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKDY 440
            NYPTHDLELAAVVHALKIWRHYLYG   EI+TDHKSLKY+FTQ +LNMRQRRWLEL+KDY
Sbjct: 875  NYPTHDLELAAVVHALKIWRHYLYGNHTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDY 934

Query: 439  DCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLAS 260
            D  I+YHPGKANVVADALSRK+ C           L +EF  L + ++     +K  +A+
Sbjct: 935  DMEIHYHPGKANVVADALSRKSYCNMSEGRCLPWELCQEFEKLNLGIV-----SKGFVAA 989

Query: 259  LVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXXX 80
            L   PTL ++I+EAQ  D  + ++K  +R G   GFV  + G +    R+CVP       
Sbjct: 990  LEAKPTLFDQIREAQVNDPDIQEIKKNMRRGKAAGFVEDEQGTVWLGERICVPENKELKD 1049

Query: 79   XXXXEAHCTPYTAHPGGTKMYRDLRE 2
                EAH T Y+ HPG TKMY+DL++
Sbjct: 1050 TIMKEAHGTLYSIHPGSTKMYQDLKQ 1075


>emb|CAH66284.1| OSIGBa0161P06.1 [Oryza sativa Indica Group]
          Length = 1665

 Score =  216 bits (551), Expect = 3e-54
 Identities = 110/206 (53%), Positives = 139/206 (67%)
 Frame = -2

Query: 619  NYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKDY 440
            NYPTHDLELAAVVHALKIWRHYLYG + E++TDHKSLKY+FTQ +LNMRQRRWLEL+KDY
Sbjct: 1059 NYPTHDLELAAVVHALKIWRHYLYGNRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDY 1118

Query: 439  DCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLAS 260
            D  I+YHPGKANVVADALSRK+ C           L +EF  L + ++     +K  +A+
Sbjct: 1119 DMEIHYHPGKANVVADALSRKSYCNMSEGRSLPWELCQEFEKLNLGIV-----SKGFVAA 1173

Query: 259  LVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXXX 80
            L   PTL ++I+EAQ  D  + ++K  +R G   GFV  + G +    R+CVP       
Sbjct: 1174 LEAKPTLFDQIREAQVNDPDIQEIKKNMRRGKAIGFVEDEQGTVWLGERICVPENKELKD 1233

Query: 79   XXXXEAHCTPYTAHPGGTKMYRDLRE 2
                EAH T Y+ HPG TKMY+DL++
Sbjct: 1234 TIMKEAHETLYSIHPGSTKMYQDLKQ 1259


>dbj|BAH80025.1| putative retrotransposon protein [Oryza sativa Indica Group]
          Length = 1727

 Score =  216 bits (550), Expect = 4e-54
 Identities = 111/206 (53%), Positives = 139/206 (67%)
 Frame = -2

Query: 619  NYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKDY 440
            NYPTHDLELAAVVHALKIWRHYLYG + EI+TDHKSLKY+FTQ +LNMRQRRWLEL+KDY
Sbjct: 1121 NYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDY 1180

Query: 439  DCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLAS 260
            D  I+YHPGKANVVADALSRK+ C           L +EF  L + ++     +K  +A+
Sbjct: 1181 DMEIHYHPGKANVVADALSRKSYCNMSEGRCLPWELCQEFEKLNLGIV-----SKGFVAT 1235

Query: 259  LVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXXX 80
            L   PTL ++I+EAQ  D  + ++K  +R G   GFV  + G +    R+CVP       
Sbjct: 1236 LEAKPTLFDQIREAQVNDPDIQEIKKNMRRGKAIGFVEDERGTVWLGERICVPENKELKD 1295

Query: 79   XXXXEAHCTPYTAHPGGTKMYRDLRE 2
                EAH T Y+ HPG TKMY+DL++
Sbjct: 1296 TIMKEAHETLYSIHPGSTKMYQDLKQ 1321


>emb|CAH66139.1| H0616A11.3 [Oryza sativa Indica Group]
          Length = 1451

 Score =  216 bits (549), Expect = 5e-54
 Identities = 110/206 (53%), Positives = 139/206 (67%)
 Frame = -2

Query: 619  NYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKDY 440
            NYPTHDLELAAVVHALKIWRHYLYG + EI+TDHKSLKY+FTQ +LNMRQRRWLEL+KDY
Sbjct: 875  NYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDY 934

Query: 439  DCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLAS 260
            D  I+YHPGKANVVADALSRK+ C           L +EF  L + ++     +K  +A+
Sbjct: 935  DMEIHYHPGKANVVADALSRKSYCNVSEGRRLPWELCQEFEKLNLGIV-----SKGFVAT 989

Query: 259  LVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXXX 80
            L   PTL ++I+EAQ  D  + ++K  +R G   G+V  + G +    R+CVP       
Sbjct: 990  LEAKPTLFDQIREAQVNDPDIQEIKKNMRRGKAIGYVEDEQGTVWLGERICVPENKELKD 1049

Query: 79   XXXXEAHCTPYTAHPGGTKMYRDLRE 2
                EAH T Y+ HPG TKMY+DL++
Sbjct: 1050 TIMKEAHETLYSIHPGSTKMYQDLKQ 1075


>gb|ABB47441.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1802

 Score =  215 bits (548), Expect = 7e-54
 Identities = 108/206 (52%), Positives = 139/206 (67%)
 Frame = -2

Query: 619  NYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKDY 440
            NYPTHDLELAAVVHALKIWRHYL G +CEI+TDHKSLKY+FTQ +LN+RQRRWLEL+KDY
Sbjct: 1230 NYPTHDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDY 1289

Query: 439  DCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLAS 260
            D  I+YHPGKANVVADALSRK+ C           L ++ A+L + ++     ++  LA+
Sbjct: 1290 DVGIHYHPGKANVVADALSRKSHCNTLNIRGIPPELNQQMAALNLNIV-----SRGFLAA 1344

Query: 259  LVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXXX 80
            L   PTL ++I+EAQ  D  ++ +   +++G   GF   + G L    R+CVP       
Sbjct: 1345 LEAKPTLLDQIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDVRELKQ 1404

Query: 79   XXXXEAHCTPYTAHPGGTKMYRDLRE 2
                EAH +PY+ HPG TKMY DL+E
Sbjct: 1405 LILQEAHESPYSIHPGSTKMYLDLKE 1430


>emb|CAD40393.3| OSJNBa0004L19.12 [Oryza sativa Japonica Group]
          Length = 787

 Score =  215 bits (548), Expect = 7e-54
 Identities = 108/206 (52%), Positives = 139/206 (67%)
 Frame = -2

Query: 619 NYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKDY 440
           NYPTHDLELAAVVHALKIWRHYL G +CEI+TDHKSLKY+FTQ +LN+RQRRWLEL+KDY
Sbjct: 215 NYPTHDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDY 274

Query: 439 DCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLAS 260
           D  I+YHPGKANVVADALSRK+ C           L ++ A+L + ++     ++  LA+
Sbjct: 275 DVGIHYHPGKANVVADALSRKSHCNTLNIRGIPPELNQQMAALNLSIV-----SRGFLAA 329

Query: 259 LVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXXX 80
           L   PTL ++I+EAQ  D  ++ +   +++G   GF   + G L    R+CVP       
Sbjct: 330 LEAKPTLLDQIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDNRELKQ 389

Query: 79  XXXXEAHCTPYTAHPGGTKMYRDLRE 2
               EAH +PY+ HPG TKMY DL+E
Sbjct: 390 LILQEAHESPYSIHPGSTKMYLDLKE 415


>emb|CAD40396.3| OSJNBa0004L19.15 [Oryza sativa Japonica Group]
          Length = 1821

 Score =  215 bits (548), Expect = 7e-54
 Identities = 108/206 (52%), Positives = 139/206 (67%)
 Frame = -2

Query: 619  NYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKDY 440
            NYPTHDLELAAVVHALKIWRHYL G +CEI+TDHKSLKY+FTQ +LN+RQRRWLEL+KDY
Sbjct: 1215 NYPTHDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDY 1274

Query: 439  DCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLAS 260
            D  I+YHPGKANVVADALSRK+ C           L ++ A+L + ++     ++  LA+
Sbjct: 1275 DVGIHYHPGKANVVADALSRKSHCNTLNIRGIPPELNQQMAALNLSIV-----SRGFLAA 1329

Query: 259  LVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXXX 80
            L   PTL ++I+EAQ  D  ++ +   +++G   GF   + G L    R+CVP       
Sbjct: 1330 LEAKPTLLDQIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDNRELKQ 1389

Query: 79   XXXXEAHCTPYTAHPGGTKMYRDLRE 2
                EAH +PY+ HPG TKMY DL+E
Sbjct: 1390 LILQEAHESPYSIHPGSTKMYLDLKE 1415


>gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1851

 Score =  215 bits (547), Expect = 9e-54
 Identities = 109/206 (52%), Positives = 136/206 (66%)
 Frame = -2

Query: 622  LNYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKD 443
            +NYPTHDLELAAV+HALKIWRHYL G +CE++TDHKSLKY+FTQ ELNMRQRRWLEL+KD
Sbjct: 1255 VNYPTHDLELAAVIHALKIWRHYLIGNRCEVYTDHKSLKYIFTQTELNMRQRRWLELIKD 1314

Query: 442  YDCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLA 263
            YD  I+YHPGKANVVADALSRK  C           L RE   L++ V+        V A
Sbjct: 1315 YDLGIHYHPGKANVVADALSRKAYCNVAQIRPDQDQLCRELEKLRLTVV-----QSGVPA 1369

Query: 262  SLVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXX 83
            SL V PTL  +I+EAQ  D+ + ++  R++E     F + D G +    R+CVP      
Sbjct: 1370 SLTVQPTLESQIREAQKEDEGIKELIERIQEKKDTNFSIDDQGTVWCGPRICVPAKKELR 1429

Query: 82   XXXXXEAHCTPYTAHPGGTKMYRDLR 5
                 EAH + Y+ HPG TKMY+D++
Sbjct: 1430 DLILKEAHESAYSIHPGSTKMYQDIK 1455


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  215 bits (547), Expect = 9e-54
 Identities = 107/206 (51%), Positives = 138/206 (66%)
 Frame = -2

Query: 619  NYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKDY 440
            NYPTHDLELAAVVHALKIWRHYL G +CEI+TDHKSLKY+FTQ +LN+RQRRWLEL+KDY
Sbjct: 1841 NYPTHDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDY 1900

Query: 439  DCTINYHPGKANVVADALSRKTKCXXXXXXXXXXXLVREFASLKIEVITPPRSTKAVLAS 260
            D  I+YHPGKANVVADALSRK+ C           L ++  +L + ++     ++  LA+
Sbjct: 1901 DVGIHYHPGKANVVADALSRKSHCNTLGVRGIPPELNQQMEALNLSIV-----SRGFLAT 1955

Query: 259  LVV*PTLRERIKEAQGRDQFLNKMKGRVREGNIKGFVVADDGVLTYEGRLCVPXXXXXXX 80
            L   PTL ++I+EAQ  D  +  +   +++G   GF+  + G L    R+CVP       
Sbjct: 1956 LEAKPTLLDQIREAQKNDPDMRGLLKNMKQGKAAGFIEDEHGTLWNRNRVCVPDVRELKQ 2015

Query: 79   XXXXEAHCTPYTAHPGGTKMYRDLRE 2
                EAH +PY+ HPG TKMY DL+E
Sbjct: 2016 LILQEAHESPYSIHPGSTKMYLDLKE 2041



 Score = 82.4 bits (202), Expect = 9e-14
 Identities = 36/82 (43%), Positives = 57/82 (69%)
 Frame = -2

Query: 622  LNYPTHDLELAAVVHALKIWRHYLYGGKCEIFTDHKSLKYLFTQKELNMRQRRWLELVKD 443
            LNY T+D EL A+V  L+ W+HYL+  +  I +DH+SLK++ +Q +LN R  +W+E ++ 
Sbjct: 1048 LNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIES 1107

Query: 442  YDCTINYHPGKANVVADALSRK 377
            +   I +  GK N++ADALSR+
Sbjct: 1108 FPYVIKHKKGKENIIADALSRR 1129