BLASTX nr result
ID: Rehmannia22_contig00006556
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00006556
(368 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006385629.1| hypothetical protein POPTR_0003s08800g [Popu... 89 8e-16
ref|XP_006352838.1| PREDICTED: pentatricopeptide repeat-containi... 83 3e-14
gb|EOY24047.1| Pentatricopeptide (PPR) repeat-containing protein... 83 3e-14
ref|XP_004245879.1| PREDICTED: pentatricopeptide repeat-containi... 83 4e-14
ref|XP_004148730.1| PREDICTED: pentatricopeptide repeat-containi... 82 6e-14
gb|EPS71054.1| hypothetical protein M569_03703 [Genlisea aurea] 80 2e-13
ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containi... 79 5e-13
ref|XP_006485434.1| PREDICTED: pentatricopeptide repeat-containi... 79 6e-13
ref|XP_006436751.1| hypothetical protein CICLE_v10033739mg [Citr... 77 2e-12
ref|XP_002519842.1| pentatricopeptide repeat-containing protein,... 71 1e-10
ref|XP_006281680.1| hypothetical protein CARUB_v10027819mg [Caps... 69 6e-10
ref|XP_006398352.1| hypothetical protein EUTSA_v10000815mg [Eutr... 64 2e-08
ref|XP_004300258.1| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
ref|XP_004509010.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|NP_199470.1| pentatricopeptide repeat-containing protein [Ar... 62 6e-08
ref|XP_002863397.1| pentatricopeptide repeat-containing protein ... 62 6e-08
gb|EXB99769.1| hypothetical protein L484_023300 [Morus notabilis] 60 2e-07
gb|EMJ11528.1| hypothetical protein PRUPE_ppa002049mg [Prunus pe... 60 3e-07
ref|XP_002466068.1| hypothetical protein SORBIDRAFT_01g000640 [S... 60 4e-07
gb|ACL52700.1| unknown [Zea mays] 58 1e-06
>ref|XP_006385629.1| hypothetical protein POPTR_0003s08800g [Populus trichocarpa]
gi|550342759|gb|ERP63426.1| hypothetical protein
POPTR_0003s08800g [Populus trichocarpa]
Length = 721
Score = 88.6 bits (218), Expect = 8e-16
Identities = 52/109 (47%), Positives = 65/109 (59%), Gaps = 12/109 (11%)
Frame = +2
Query: 77 MATNLSTALGPYHHHPDTNHRRPFHFT--------KKRFTISCNSS----KRAXXXXXXS 220
MA +LSTAL + P ++ +RP FT KKR ISCNSS +
Sbjct: 1 MAASLSTALDVHFTIPKSDTKRPIFFTSPIRHNPTKKRLAISCNSSTSETSSSTKPPQNL 60
Query: 221 AVAQESKNPSLADQLKPLSTTILSDQPNETHLLSKPKSTWVNPTKPKPS 367
+ + KNPSL+DQLKPLS T LS + ++ LLSKPKSTWVNPT+PK S
Sbjct: 61 SESPSPKNPSLSDQLKPLSATTLSTKDHKAQLLSKPKSTWVNPTRPKRS 109
>ref|XP_006352838.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Solanum tuberosum]
Length = 711
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = +2
Query: 161 KRFTISCNSSKRAXXXXXXSAVAQESKNPSLADQLKPLSTTILSDQPNETHLLSKPKSTW 340
KRFTI CNS+ ++ + K PSL++QLKPLS TIL D PN+ +LSKPKSTW
Sbjct: 40 KRFTILCNSTSKSPKPNLD--LDSSRKKPSLSEQLKPLSNTILDDPPNQARILSKPKSTW 97
Query: 341 VNPTKPKPS 367
VNPT+PKPS
Sbjct: 98 VNPTRPKPS 106
>gb|EOY24047.1| Pentatricopeptide (PPR) repeat-containing protein [Theobroma cacao]
Length = 711
Score = 83.2 bits (204), Expect = 3e-14
Identities = 51/104 (49%), Positives = 66/104 (63%), Gaps = 7/104 (6%)
Frame = +2
Query: 77 MATNLSTALGPYHHHPDTNHRRPFHFTK-------KRFTISCNSSKRAXXXXXXSAVAQE 235
MA LSTAL + ++ +RP FTK ++FTISCNSSK + V+ +
Sbjct: 1 MAAALSTALDVHFPIAQSDTKRPVFFTKTKTQNPRRKFTISCNSSKSSSKPPKNPPVSPK 60
Query: 236 SKNPSLADQLKPLSTTILSDQPNETHLLSKPKSTWVNPTKPKPS 367
K PSL++QL+PLSTT L + ++ LLSKPKSTWVNPTKPK S
Sbjct: 61 -KTPSLSEQLQPLSTTTLPKK-DQACLLSKPKSTWVNPTKPKRS 102
>ref|XP_004245879.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Solanum lycopersicum]
Length = 711
Score = 82.8 bits (203), Expect = 4e-14
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +2
Query: 161 KRFTISCNSSKRAXXXXXXSAVAQESKNPSLADQLKPLSTTILSDQPNETHLLSKPKSTW 340
KRFT+ CNS+ ++ + K PSL++QLKPLS TIL D PN+ +LSKPKSTW
Sbjct: 40 KRFTVLCNSTSKSPKPNLD--LDSSRKKPSLSEQLKPLSNTILDDPPNQARILSKPKSTW 97
Query: 341 VNPTKPKPS 367
VNPT+PKPS
Sbjct: 98 VNPTRPKPS 106
>ref|XP_004148730.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Cucumis sativus]
gi|449521148|ref|XP_004167592.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Cucumis sativus]
Length = 710
Score = 82.4 bits (202), Expect = 6e-14
Identities = 43/70 (61%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Frame = +2
Query: 161 KRFTISCNSSKRAXXXXXXSAVAQESKNPSLADQLKPLSTTILSDQPN-ETHLLSKPKST 337
KR T+ C+SSK S+ + ++KNPSL++QLK LSTT LS+ PN ET LLSKPKST
Sbjct: 31 KRLTLLCSSSKSPRKPSSVSSQSVDNKNPSLSEQLKNLSTTTLSNAPNDETRLLSKPKST 90
Query: 338 WVNPTKPKPS 367
WVNPTKPK S
Sbjct: 91 WVNPTKPKRS 100
>gb|EPS71054.1| hypothetical protein M569_03703 [Genlisea aurea]
Length = 707
Score = 80.5 bits (197), Expect = 2e-13
Identities = 49/103 (47%), Positives = 64/103 (62%), Gaps = 6/103 (5%)
Frame = +2
Query: 77 MATNLSTALGP-YHHHPDTN---HRRPFHF-TKKRFTISCNSSKRAXXXXXXSAVAQESK 241
MATN++TA P Y P+ RRP H T K + S+KR +AVAQ+
Sbjct: 1 MATNITTAASPSYPRFPEITVCGRRRPVHLPTGKALRVYSGSNKRTPPSPS-TAVAQDES 59
Query: 242 NPSLADQLKPLSTTILSDQPN-ETHLLSKPKSTWVNPTKPKPS 367
NPSLA+QLKPLS ILS + + + L +KPKSTW+NPT+P+PS
Sbjct: 60 NPSLAEQLKPLSDVILSVEADASSTLTTKPKSTWINPTRPRPS 102
>ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic [Vitis vinifera]
Length = 723
Score = 79.3 bits (194), Expect = 5e-13
Identities = 42/80 (52%), Positives = 51/80 (63%), Gaps = 8/80 (10%)
Frame = +2
Query: 152 FTKKRFTISCNSSKRAXXXXXXSAVAQES-------KNPSLADQLKPLSTTILS-DQPNE 307
F+ FTI CNSS R+ S +NPSL++QLKPLS TIL+ D +
Sbjct: 35 FSSNTFTIRCNSSSRSPPKPKPKPKPTSSDSEQTNHQNPSLSEQLKPLSKTILTRDHSGQ 94
Query: 308 THLLSKPKSTWVNPTKPKPS 367
THL+SKPKSTW+NPTKPKPS
Sbjct: 95 THLVSKPKSTWINPTKPKPS 114
>ref|XP_006485434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Citrus sinensis]
Length = 730
Score = 79.0 bits (193), Expect = 6e-13
Identities = 54/116 (46%), Positives = 66/116 (56%), Gaps = 13/116 (11%)
Frame = +2
Query: 59 SFTLTPMATNLSTALGPYHHHPDTNHRRPFHFTKK-------RFTISCNSSKRAXXXXXX 217
S +L MA +LSTAL + P ++ +RP TK + ISCNS
Sbjct: 15 STSLALMAASLSTALDVHLSIPKSDTKRPIFLTKPTQRSHPIKINISCNSKSSEN----- 69
Query: 218 SAVAQESKNP-----SLADQLKPLSTTILSDQPNE-THLLSKPKSTWVNPTKPKPS 367
VA ES NP SL++QLKPLS+T LS N+ T LLSKPKSTWVNPTKP+ S
Sbjct: 70 --VAAESPNPETKTLSLSEQLKPLSSTTLSPTKNDRTPLLSKPKSTWVNPTKPRRS 123
>ref|XP_006436751.1| hypothetical protein CICLE_v10033739mg [Citrus clementina]
gi|557538947|gb|ESR49991.1| hypothetical protein
CICLE_v10033739mg [Citrus clementina]
Length = 692
Score = 77.4 bits (189), Expect = 2e-12
Identities = 52/110 (47%), Positives = 63/110 (57%), Gaps = 13/110 (11%)
Frame = +2
Query: 77 MATNLSTALGPYHHHPDTNHRRPFHFTKK-------RFTISCNSSKRAXXXXXXSAVAQE 235
MA +LSTAL + P ++ +RP TK + ISCNS VA E
Sbjct: 1 MAASLSTALDVHLSIPKSDTKRPIFLTKPTQRSHPIKINISCNSKSSEN-------VAAE 53
Query: 236 SKNP-----SLADQLKPLSTTILSDQPNE-THLLSKPKSTWVNPTKPKPS 367
S NP SL++QLKPLS+T LS N+ T LLSKPKSTWVNPTKP+ S
Sbjct: 54 SPNPETKTLSLSEQLKPLSSTTLSPTKNDRTPLLSKPKSTWVNPTKPRRS 103
>ref|XP_002519842.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540888|gb|EEF42446.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 677
Score = 71.2 bits (173), Expect = 1e-10
Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Frame = +2
Query: 128 TNHRRPFHFTKKRFTISCNSSKRAXXXXXXSAVAQESKNPSLADQLKPLSTTILSDQPNE 307
T++ P+ ++R TISCNS K + + + KNPSL+DQLKPLS+T LS
Sbjct: 37 THNNNPY---RRRLTISCNSRKTSKHL----SESPNPKNPSLSDQLKPLSSTTLSTTTTT 89
Query: 308 T----HLLSKPKSTWVNPTKPKPS 367
T LLSKP STWVNPTKPK S
Sbjct: 90 TTTKHSLLSKPNSTWVNPTKPKRS 113
>ref|XP_006281680.1| hypothetical protein CARUB_v10027819mg [Capsella rubella]
gi|482550384|gb|EOA14578.1| hypothetical protein
CARUB_v10027819mg [Capsella rubella]
Length = 715
Score = 68.9 bits (167), Expect = 6e-10
Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Frame = +2
Query: 77 MATNLSTAL----GPYHHHPDTNHRRPF-------HFTKKRFTISCNSSKRAXXXXXXSA 223
MAT L+TA+ P+ + DT F ++ ISC+S K+
Sbjct: 1 MATVLTTAIDVCFNPHPQNSDTKKHSLFLKPSLLRQSRTRKLNISCSSLKQPKTLEEEPI 60
Query: 224 VAQESKNPSLADQLKPLSTTILSDQPNETHLLSKPKSTWVNPTKPKPS 367
+K+ SL++QLKPLS T L ++ +TH+LSKPKS WVNPT+PK S
Sbjct: 61 TTTTTKSSSLSEQLKPLSATTLREE--QTHILSKPKSVWVNPTRPKRS 106
>ref|XP_006398352.1| hypothetical protein EUTSA_v10000815mg [Eutrema salsugineum]
gi|557099441|gb|ESQ39805.1| hypothetical protein
EUTSA_v10000815mg [Eutrema salsugineum]
Length = 642
Score = 63.9 bits (154), Expect = 2e-08
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Frame = +2
Query: 77 MATNLSTALGPYHHHPDTNHRRPFHFTK---------KRFTISCNSSKRAXXXXXXSAVA 229
MAT LSTA+ + ++ ++ F K ++ ISCNS K+
Sbjct: 1 MATVLSTAIDVCFNPQSSDTKKHSLFLKPSSLRQSRARKLNISCNSLKQPKTLEEEPV-- 58
Query: 230 QESKNPSLADQLKPLSTTILSDQPNETHLLSKPKSTWVNPTKPK 361
+K PSL++QLKPLS T L + ++T +LSKPKS WVNPT+PK
Sbjct: 59 --TKTPSLSEQLKPLSATTL--RQDQTQVLSKPKSVWVNPTRPK 98
>ref|XP_004300258.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 716
Score = 62.8 bits (151), Expect = 5e-08
Identities = 42/96 (43%), Positives = 50/96 (52%), Gaps = 19/96 (19%)
Frame = +2
Query: 137 RRPFHFTK-------KRFTISCNSSKRAXXXXXX----------SAVAQESKNPSLADQL 265
+RP FT KRFTISC S+K + ++K SL+DQL
Sbjct: 17 KRPIFFTSPLKLIPPKRFTISCRSTKSPPKSPPDLSPPHNKNTNTTTKTKTKTQSLSDQL 76
Query: 266 KPLSTTIL--SDQPNETHLLSKPKSTWVNPTKPKPS 367
KPL+TT L DQP +LSKPKS WVNP KPK S
Sbjct: 77 KPLTTTTLPPKDQPQ---VLSKPKSIWVNPAKPKRS 109
>ref|XP_004509010.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Cicer arietinum]
Length = 706
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Frame = +2
Query: 77 MATNLSTALGPYHHHPDTNHRR-----PFHFTKKRFTISCNSSKRAXXXXXXSAVAQESK 241
MA +LS+ + Y T R P +RF SC+ SK S++ + K
Sbjct: 1 MAASLSSVIHIYFVDTKTTRTRFSITTPTLKNHRRFITSCSKSK--------SSIPDDQK 52
Query: 242 NPSLADQLKPLSTTILSDQP-NETHLLSKPKSTWVNPTKPK 361
N SL++QL LS T LS P ++ H+ SKPK TW+NPTK K
Sbjct: 53 NSSLSEQLVSLSNTTLSTHPEDQAHVFSKPKPTWINPTKAK 93
>ref|NP_199470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180372|sp|Q9LS25.1|PP420_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g46580, chloroplastic; Flags: Precursor
gi|8885599|dbj|BAA97529.1| unnamed protein product
[Arabidopsis thaliana] gi|332008017|gb|AED95400.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 711
Score = 62.4 bits (150), Expect = 6e-08
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Frame = +2
Query: 77 MATNLSTALGPYHHHPDTNHRRPFHFTK---------KRFTISCNSSKRAXXXXXXSAVA 229
MAT L+TA+ + +++ ++ F K ++ ISC+S K+
Sbjct: 1 MATVLTTAIDVCFNPQNSDTKKHSLFLKPSLFRQSRSRKLNISCSSLKQPKTLEEEPIT- 59
Query: 230 QESKNPSLADQLKPLSTTILSDQPNETHLLSKPKSTWVNPTKPKPS 367
+K PSL++QLKPLS T L + +T +LSKPKS WVNPT+PK S
Sbjct: 60 --TKTPSLSEQLKPLSATTLRQE--QTQILSKPKSVWVNPTRPKRS 101
>ref|XP_002863397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297309232|gb|EFH39656.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 711
Score = 62.4 bits (150), Expect = 6e-08
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Frame = +2
Query: 77 MATNLSTALGPYHHHPDTNHRRPFHFTK---------KRFTISCNSSKRAXXXXXXSAVA 229
MAT L+TA+ + +++ ++ F K ++ ISC+S K+
Sbjct: 1 MATVLTTAIDVCFNPQNSDTKKHSLFLKPSLLRQSRTRKLNISCSSLKQPKTLEEEPIT- 59
Query: 230 QESKNPSLADQLKPLSTTILSDQPNETHLLSKPKSTWVNPTKPKPS 367
+K PSL++QLKPLS T L + +T +LSKPKS WVNPT+PK S
Sbjct: 60 --TKTPSLSEQLKPLSATTLRQE--QTQILSKPKSVWVNPTRPKRS 101
>gb|EXB99769.1| hypothetical protein L484_023300 [Morus notabilis]
Length = 710
Score = 60.5 bits (145), Expect = 2e-07
Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Frame = +2
Query: 155 TKKRFTISCNSSKRAXXXXXXSAVAQESKNPSLADQLKPLSTTILS---DQPNETHLLSK 325
T+ TISC +S + + K SL++QLKPL+TT LS +Q N T LLSK
Sbjct: 40 TRTTLTISCCTSPKP----------RNKKTSSLSEQLKPLTTTTLSNDQEQQNNT-LLSK 88
Query: 326 PKSTWVNPTKPKPS 367
PKSTWVNPT+PK S
Sbjct: 89 PKSTWVNPTRPKRS 102
>gb|EMJ11528.1| hypothetical protein PRUPE_ppa002049mg [Prunus persica]
Length = 724
Score = 60.1 bits (144), Expect = 3e-07
Identities = 40/99 (40%), Positives = 52/99 (52%), Gaps = 22/99 (22%)
Frame = +2
Query: 137 RRPFHFTK-------KRFTISCNSSKRAXXXXXXSAVAQES------------KNPSLA- 256
+RP FT KRF +SC S+K A KNPSL+
Sbjct: 17 KRPIFFTSPFRQIPTKRFNLSCRSTKSPPKSPPDLAEPNSKNNNKKNDDNNNKKNPSLSL 76
Query: 257 -DQLKPLSTTILSDQP-NETHLLSKPKSTWVNPTKPKPS 367
+QL+PL++T LS+ P +++ LLSKPKS WVNP KPK S
Sbjct: 77 SEQLQPLTSTTLSNPPKDQSQLLSKPKSIWVNPAKPKRS 115
>ref|XP_002466068.1| hypothetical protein SORBIDRAFT_01g000640 [Sorghum bicolor]
gi|241919922|gb|EER93066.1| hypothetical protein
SORBIDRAFT_01g000640 [Sorghum bicolor]
Length = 722
Score = 59.7 bits (143), Expect = 4e-07
Identities = 36/85 (42%), Positives = 48/85 (56%)
Frame = +2
Query: 113 HHHPDTNHRRPFHFTKKRFTISCNSSKRAXXXXXXSAVAQESKNPSLADQLKPLSTTILS 292
+ HP T +P H TI C+SS +A A S +PSL++QL+PLS T+L
Sbjct: 26 YQHPKT---KPKHTA----TILCSSS---------AATATGSASPSLSEQLEPLSRTLLH 69
Query: 293 DQPNETHLLSKPKSTWVNPTKPKPS 367
D+P P+ TWVNPT+PKPS
Sbjct: 70 DKPTPIADRPTPEPTWVNPTRPKPS 94
>gb|ACL52700.1| unknown [Zea mays]
Length = 716
Score = 58.2 bits (139), Expect = 1e-06
Identities = 32/70 (45%), Positives = 41/70 (58%)
Frame = +2
Query: 158 KKRFTISCNSSKRAXXXXXXSAVAQESKNPSLADQLKPLSTTILSDQPNETHLLSKPKST 337
K TI C+S+ +A A S +PSL+ QL+PLS T+L D+P P+ T
Sbjct: 33 KPTATILCSSTS--------AATAAGSASPSLSQQLEPLSRTLLHDKPTPIADRPTPEPT 84
Query: 338 WVNPTKPKPS 367
WVNPTKPKPS
Sbjct: 85 WVNPTKPKPS 94