BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00006470
         (770 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004289281.1| PREDICTED: putative ribonuclease H protein A...    51   3e-08
ref|XP_004304923.1| PREDICTED: putative ribonuclease H protein A...    44   2e-07
ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein A...    42   3e-07
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...    41   7e-07
ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein A...    59   7e-07
ref|XP_004305144.1| PREDICTED: putative ribonuclease H protein A...    44   7e-07
gb|EMJ14652.1| hypothetical protein PRUPE_ppa024777mg, partial [...    43   9e-07
ref|XP_004308354.1| PREDICTED: putative ribonuclease H protein A...    45   2e-06
ref|XP_002516681.1| conserved hypothetical protein [Ricinus comm...    51   2e-06

>ref|XP_004289281.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 215

 Score = 50.8 bits (120), Expect(2) = 3e-08
 Identities = 33/89 (37%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +3

Query: 204 TDGCALGSPGRCTATVVFRMHRGFFRSCFVEQCGVDXXXXXXXXXXXXXISLAFHKG*HK 383
           TDG A G+PG  T   VFR ++G F   F    G               I LAF  G   
Sbjct: 62  TDGLAKGNPGPATCGGVFRDYQGHFIGGFSTPIGHHNDFFSELLAVIIGIELAFQLGWQH 121

Query: 384 LWLESDSTYVVDLFKKPDSV-TWRFLGHW 467
           +WLE DST VV+ F K   V  W+    W
Sbjct: 122 VWLECDSTSVVECFSKSSFVPPWQLRTLW 150



 Score = 33.9 bits (76), Expect(2) = 3e-08
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = +2

Query: 491 SVDFVVSHIYREGNRVADCLSKI-LDTSNW-WDSPPP 595
           S+ F  SH+ REGN VAD L  + + +S+W W + PP
Sbjct: 159 SMSFFCSHVLREGNIVADRLVNLGMSSSSWIWHASPP 195


>ref|XP_004304923.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 209

 Score = 43.5 bits (101), Expect(2) = 2e-07
 Identities = 32/98 (32%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
 Frame = +3

Query: 204 TDGCALGSPGRCTATVVFRMHRGFFRSCFVEQCGVDXXXXXXXXXXXXXISLAFHKG*HK 383
           TDG A G+P       VFR   G F   F +  G               I +A  KG   
Sbjct: 56  TDGLAKGNPSPAACGGVFRDASGGFLGSFCQSLGWKTSFYSELYAVILAIEIAHDKGWVY 115

Query: 384 LWLESDSTYVVDLF-KKPDSVTWRFLGHWCYIMYLLSQ 494
           LWLESDS  VV  F  K  S  W     W   + ++ Q
Sbjct: 116 LWLESDSVSVVACFSSKSFSPPWNLRVRWNNCLSIIRQ 153



 Score = 38.5 bits (88), Expect(2) = 2e-07
 Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
 Frame = +2

Query: 494 VDFVVSHIYREGNRVADCLSKILDTSN----WWDSPPPDITMLLNAYYV 628
           ++F  SHI+REGN VAD ++  L  SN    W+D+PP ++   L A Y+
Sbjct: 154 MNFRCSHIFREGNMVADKMAN-LGLSNASFTWYDNPPTELHGFLQADYL 201


>ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 364

 Score = 42.4 bits (98), Expect(2) = 3e-07
 Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
 Frame = +2

Query: 470 LHYVSAFSVDFVVSHIYREGNRVADCLSKI---LDTSNWWDSPP 592
           LH +S   ++F  SHI+REGN+VAD L+ +   +   +WWD PP
Sbjct: 316 LHRIS--QMNFRSSHIFREGNQVADALANMGLSMSALSWWDEPP 357



 Score = 39.3 bits (90), Expect(2) = 3e-07
 Identities = 25/97 (25%), Positives = 38/97 (39%)
 Frame = +3

Query: 204 TDGCALGSPGRCTATVVFRMHRGFFRSCFVEQCGVDXXXXXXXXXXXXXISLAFHKG*HK 383
           TDG    + G+     +FR   G F   F     +              I LA+ +    
Sbjct: 225 TDGAWQKTTGKSGYGGIFRDFHGSFLGAFASNLEILNSVDAEVMAVIQAIELAWVRDWEH 284

Query: 384 LWLESDSTYVVDLFKKPDSVTWRFLGHWCYIMYLLSQ 494
           +WLE DS  V++  + P  V WR    W   ++ +SQ
Sbjct: 285 IWLEVDSIIVLNFLQDPHLVPWRLRVGWGNFLHRISQ 321


>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 872

 Score = 40.8 bits (94), Expect(2) = 7e-07
 Identities = 22/83 (26%), Positives = 34/83 (40%)
 Frame = +3

Query: 252 VFRMHRGFFRSCFVEQCGVDXXXXXXXXXXXXXISLAFHKG*HKLWLESDSTYVVDLFKK 431
           VFR ++G F   F     +              I LA+ +    +WLE D + V+D  + 
Sbjct: 736 VFRYYKGQFVGAFASHIDIPSSIAAKVMVVITAIELAWVRDWKHVWLEVDFSTVLDYIRS 795

Query: 432 PDSVTWRFLGHWCYIMYLLSQWT 500
           P  V W+    W   +Y +S  T
Sbjct: 796 PSLVPWQLRVRWLNCLYRISTMT 818



 Score = 39.3 bits (90), Expect(2) = 7e-07
 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
 Frame = +2

Query: 491 SVDFVVSHIYREGNRVADCLSK---ILDTSNWWDSPP 592
           ++ F  SHI+REGNRVAD L+     +    WWD PP
Sbjct: 816 TMTFKSSHIFREGNRVADALANHGTSMSEEVWWDVPP 852


>ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 197

 Score = 58.5 bits (140), Expect(2) = 7e-07
 Identities = 34/101 (33%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
 Frame = +3

Query: 204 TDGCALGSPGRCTATVVFRMHRGFFRSCFVEQCGVDXXXXXXXXXXXXXISLAFHKG*HK 383
           TDG A GSPG      +FR H G    CF    G+              I +A  +G H 
Sbjct: 43  TDGAARGSPGLAGFGGIFRDHLGHVLGCFSGNLGIANALEAELQTVIHAIQMASQRGWHS 102

Query: 384 LWLESDSTYVVDLFKK-PDSVTWRFLGHWCYIMYLLSQWTL 503
           LW+ESDST V+         V WRF   W     +L+  T+
Sbjct: 103 LWIESDSTLVIHFLSSFQVDVPWRFTTEWFNCRTILTTMTV 143



 Score = 21.6 bits (44), Expect(2) = 7e-07
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 142 RFQVLGHSRKAPKIIQVD*HL 204
           R  + G   KAPKI++V  H+
Sbjct: 13  RIGIKGRPSKAPKIVEVMWHV 33


>ref|XP_004305144.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 183

 Score = 44.3 bits (103), Expect(2) = 7e-07
 Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
 Frame = +3

Query: 204 TDGCALGSPGRCTATVVFRMHRGFFRSCFVEQCGVDXXXXXXXXXXXXXISLAFHKG*HK 383
           TDG A G+ G      VFR ++G F   F    G               I L F  G   
Sbjct: 30  TDGLAKGNSGPAACGGVFRDYQGHFIGGFSTPIGHHNAFFSELLAVIIGIELTFQLGWQH 89

Query: 384 LWLESDSTYVVDLFKKPDSV-TWRFLGHW 467
           +WLE DST VV+ F K   V  W+    W
Sbjct: 90  VWLECDSTSVVECFSKSSFVPPWQLRTLW 118



 Score = 35.8 bits (81), Expect(2) = 7e-07
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
 Frame = +2

Query: 491 SVDFVVSHIYREGNRVADCLSKI-LDTSNW-WDSPPP 595
           S+ F  SH+ REGN VAD L+ + + +S+W W + PP
Sbjct: 127 SMSFFCSHVLREGNTVADRLANLGMSSSSWIWHASPP 163


>gb|EMJ14652.1| hypothetical protein PRUPE_ppa024777mg, partial [Prunus persica]
          Length = 465

 Score = 42.7 bits (99), Expect(2) = 9e-07
 Identities = 24/87 (27%), Positives = 33/87 (37%)
 Frame = +3

Query: 207 DGCALGSPGRCTATVVFRMHRGFFRSCFVEQCGVDXXXXXXXXXXXXXISLAFHKG*HKL 386
           DG      G+  +  VFR ++G     F     V              I LA+    H +
Sbjct: 319 DGACKRDSGKAGSGGVFRNYQGHVLGAFSANLDVPSGVHAEVLAVIKAIELAWLHAWHNI 378

Query: 387 WLESDSTYVVDLFKKPDSVTWRFLGHW 467
           W+E+DS  V   F+ P  V WR    W
Sbjct: 379 WIETDSLLVTKFFRSPHLVPWRLRVDW 405



 Score = 37.0 bits (84), Expect(2) = 9e-07
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = +2

Query: 494 VDFVVSHIYREGNRVADCLSK---ILDTSNWWDSPPPDITMLLNAYYV*RS 637
           + F +SHI+REGN   D L+    +     WWD+ P  I  LL+A  V R+
Sbjct: 415 MSFKISHIFREGNHDVDALANHGALGSGLTWWDTAPSFIFALLSAGLVGRA 465


>ref|XP_004308354.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 235

 Score = 44.7 bits (104), Expect(2) = 2e-06
 Identities = 32/98 (32%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
 Frame = +3

Query: 204 TDGCALGSPGRCTATVVFRMHRGFFRSCFVEQCGVDXXXXXXXXXXXXXISLAFHKG*HK 383
           T+G A G+PG      VFR   G F   F    G               I +A  KG   
Sbjct: 82  TNGLAKGNPGPAACGGVFRDASGGFLGSFCHSLGWKTSFYSELYVVILAIEIAHDKGWVY 141

Query: 384 LWLESDSTYVVDLF-KKPDSVTWRFLGHWCYIMYLLSQ 494
           LWLESDS  VV  F  +  S TW     W   + ++ Q
Sbjct: 142 LWLESDSVSVVACFSSRSFSPTWNLRVRWNNCLLIIRQ 179



 Score = 33.9 bits (76), Expect(2) = 2e-06
 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
 Frame = +2

Query: 494 VDFVVSHIYREGNRVADCLSKILDTSN----WWDSPPPDITMLLNAYYV 628
           ++F  SHI+REGN VAD ++  L  SN    W+D+P  ++   L A Y+
Sbjct: 180 MNFRYSHIFREGNIVADKMAN-LGLSNVSFTWYDNPLTELHGFLQADYL 227


>ref|XP_002516681.1| conserved hypothetical protein [Ricinus communis]
           gi|223544176|gb|EEF45700.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 180

 Score = 50.8 bits (120), Expect(2) = 2e-06
 Identities = 33/98 (33%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
 Frame = +3

Query: 204 TDGCALGSPGRCTATVVFRMHRGFFRSCFVEQCGVDXXXXXXXXXXXXXISLAFHKG*HK 383
           TDG ALG+ G   A  +FR   G+    F    G +             +  A+  G   
Sbjct: 52  TDGSALGALGPAGAGGLFRNPSGYVMGAFAFSLGTNCAFFVELNSASFAVCKAWEVGWLH 111

Query: 384 LWLESDSTYVVDLFK-KPDSVTWRFLGHWCYIMYLLSQ 494
           LWLESDS YVV LF+ K  SV W     W   ++ + Q
Sbjct: 112 LWLESDSIYVVHLFRTKGTSVLWELRLAWSRYLHFVQQ 149



 Score = 27.7 bits (60), Expect(2) = 2e-06
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 470 LHYVSAFSVDFVVSHIYREGNRVAD 544
           LH+V    +DF VS+++REGN+  D
Sbjct: 144 LHFVQ--QMDFRVSYVFREGNKPTD 166