BLASTX nr result
ID: Rehmannia22_contig00006229
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00006229
(487 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006433698.1| hypothetical protein CICLE_v10002778mg [Citr... 80 5e-15
ref|XP_006472361.1| PREDICTED: 50S ribosomal protein 6, chloropl... 79 1e-14
ref|XP_002277800.1| PREDICTED: 50S ribosomal protein 6, chloropl... 82 7e-14
gb|EMJ27548.1| hypothetical protein PRUPE_ppa022547mg [Prunus pe... 80 4e-13
gb|EPS64597.1| hypothetical protein M569_10187, partial [Genlise... 79 5e-13
gb|EOY15612.1| Plastid-specific 50S ribosomal protein 6 [Theobro... 77 2e-12
sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, c... 72 2e-12
ref|XP_006356805.1| PREDICTED: 50S ribosomal protein 6, chloropl... 77 2e-12
gb|EMJ16314.1| hypothetical protein PRUPE_ppa012953mg [Prunus pe... 77 2e-12
ref|XP_004238050.1| PREDICTED: 50S ribosomal protein 6, chloropl... 77 2e-12
ref|XP_004301446.1| PREDICTED: 50S ribosomal protein 6, chloropl... 77 3e-12
ref|NP_568358.1| plastid-specific 50S ribosomal protein 6 [Arabi... 74 1e-11
ref|XP_004501081.1| PREDICTED: 50S ribosomal protein 6, chloropl... 75 1e-11
ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast prec... 74 2e-11
ref|XP_004979460.1| PREDICTED: 50S ribosomal protein 6, chloropl... 74 2e-11
ref|NP_001150884.1| plastid-specific ribosomal protein 6 [Zea ma... 73 3e-11
ref|NP_001158969.1| plastid-specific ribosomal protein 6 [Zea ma... 73 3e-11
gb|ESW09265.1| hypothetical protein PHAVU_009G113500g [Phaseolus... 73 4e-11
ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arab... 72 5e-11
ref|XP_002302374.1| plastid-specific ribosomal family protein [P... 70 5e-11
>ref|XP_006433698.1| hypothetical protein CICLE_v10002778mg [Citrus clementina]
gi|557535820|gb|ESR46938.1| hypothetical protein
CICLE_v10002778mg [Citrus clementina]
Length = 149
Score = 80.5 bits (197), Expect(2) = 5e-15
Identities = 42/63 (66%), Positives = 46/63 (73%), Gaps = 4/63 (6%)
Frame = +1
Query: 184 LVIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEWSLVSEDT----SA 351
LVIE SSRPQKKAT HHMKTRPRKT+P D+ R PTVY +WSLVS+DT SA
Sbjct: 70 LVIENSSRPQKKATAHHMKTRPRKTQPWDVNRKPTVYPPLPPLPPDWSLVSDDTDTDASA 129
Query: 352 AAP 360
AAP
Sbjct: 130 AAP 132
Score = 25.8 bits (55), Expect(2) = 5e-15
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +2
Query: 59 MSVSAIFGSRLVVPPSFSA 115
MS+S+ FGS++VV P+ S+
Sbjct: 39 MSISSFFGSQIVVVPNLSS 57
>ref|XP_006472361.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Citrus
sinensis]
Length = 111
Score = 79.3 bits (194), Expect(2) = 1e-14
Identities = 41/63 (65%), Positives = 46/63 (73%), Gaps = 4/63 (6%)
Frame = +1
Query: 184 LVIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEWSLVSEDT----SA 351
LVIE SSRPQKKAT HHMKTRPRKT+P D+ R PTVY +W+LVS+DT SA
Sbjct: 32 LVIENSSRPQKKATAHHMKTRPRKTQPWDVNRKPTVYPPLPPLPPDWTLVSDDTDTDASA 91
Query: 352 AAP 360
AAP
Sbjct: 92 AAP 94
Score = 25.8 bits (55), Expect(2) = 1e-14
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +2
Query: 59 MSVSAIFGSRLVVPPSFSA 115
MS+S+ FGS++VV P+ S+
Sbjct: 1 MSISSFFGSQIVVVPNLSS 19
>ref|XP_002277800.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Vitis vinifera]
Length = 108
Score = 82.0 bits (201), Expect = 7e-14
Identities = 40/64 (62%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Frame = +1
Query: 187 VIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEWSLVSED---TSAAA 357
VIECSSRPQKK T HHMKTRPRKT+P DI+R PTVY EW++VS D + AA
Sbjct: 36 VIECSSRPQKKGTSHHMKTRPRKTQPWDIKRRPTVYAPLPPLPPEWTVVSSDADASDAAV 95
Query: 358 PPQP 369
PP P
Sbjct: 96 PPGP 99
>gb|EMJ27548.1| hypothetical protein PRUPE_ppa022547mg [Prunus persica]
Length = 67
Score = 79.7 bits (195), Expect = 4e-13
Identities = 37/67 (55%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Frame = +1
Query: 187 VIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEWSLVS--EDTSAAAP 360
+IECSSRPQKKAT HH KTRPRKT+P D++R PTVY A+W+LVS ++ S+++P
Sbjct: 1 MIECSSRPQKKATAHHRKTRPRKTQPWDVKRKPTVYTPLPPLPADWTLVSSADEASSSSP 60
Query: 361 PQPVQSE 381
+P +E
Sbjct: 61 QEPPTTE 67
>gb|EPS64597.1| hypothetical protein M569_10187, partial [Genlisea aurea]
Length = 57
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/51 (76%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = +1
Query: 184 LVIECSSRPQKKATKHHMKTRPRKTRPSDI-RRGPTVYXXXXXXXAEWSLV 333
LVIECSSRP+KKATKHHMKTRPRKT PSDI RRGPT Y EWSLV
Sbjct: 7 LVIECSSRPEKKATKHHMKTRPRKTNPSDIRRRGPTAYPTLPVLPPEWSLV 57
>gb|EOY15612.1| Plastid-specific 50S ribosomal protein 6 [Theobroma cacao]
Length = 121
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/51 (72%), Positives = 40/51 (78%)
Frame = +1
Query: 184 LVIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEWSLVS 336
LVIECSSRPQKKATKHHMKTRPRKT+ DIRR PTVY +W+LVS
Sbjct: 40 LVIECSSRPQKKATKHHMKTRPRKTQAWDIRRKPTVYAPLPPLPPDWTLVS 90
>sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, chloroplastic; AltName:
Full=CL25; AltName: Full=Plastid-specific 50S ribosomal
protein 6; Short=PSRP-6; Flags: Precursor
gi|7578927|gb|AAF64189.1|AF245292_1 plastid-specific
ribosomal protein 6 precursor [Spinacia oleracea]
Length = 116
Score = 71.6 bits (174), Expect(2) = 2e-12
Identities = 33/57 (57%), Positives = 38/57 (66%)
Frame = +1
Query: 184 LVIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEWSLVSEDTSAA 354
+ IECSSRPQKK T HHMKTRP+KT DI+RGP VY AEW++VS A
Sbjct: 43 ITIECSSRPQKKGTAHHMKTRPKKTARWDIKRGPAVYPPLPPLPAEWTIVSSAVDEA 99
Score = 26.2 bits (56), Expect(2) = 2e-12
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 59 MSVSAIFGSRLVVPPS 106
MSVSAIFG+R+V PS
Sbjct: 1 MSVSAIFGARVVTIPS 16
>ref|XP_006356805.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Solanum
tuberosum]
Length = 111
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/66 (56%), Positives = 44/66 (66%)
Frame = +1
Query: 184 LVIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEWSLVSEDTSAAAPP 363
LVIECSSRPQKKAT HH KTRPRKT+ DIRRGP VY +EWS S+++ A
Sbjct: 42 LVIECSSRPQKKATAHHKKTRPRKTQAWDIRRGPAVYAPLPPLPSEWSFASDESGQPAAA 101
Query: 364 QPVQSE 381
+S+
Sbjct: 102 GASESD 107
>gb|EMJ16314.1| hypothetical protein PRUPE_ppa012953mg [Prunus persica]
Length = 148
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/68 (54%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Frame = +1
Query: 184 LVIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEWSLVS--EDTSAAA 357
L+IE SSRPQKKAT HH KTRPRKT+P D++R PTVY A+W+LVS ++ S+++
Sbjct: 32 LMIEYSSRPQKKATAHHRKTRPRKTQPWDVKRKPTVYTLLPPLPADWTLVSSADEASSSS 91
Query: 358 PPQPVQSE 381
P +P +E
Sbjct: 92 PKEPPTTE 99
>ref|XP_004238050.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Solanum
lycopersicum]
Length = 111
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/66 (56%), Positives = 44/66 (66%)
Frame = +1
Query: 184 LVIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEWSLVSEDTSAAAPP 363
LVIECSSRPQKKAT HH KTRPRKT+ DIRRGP VY +EWS S+++ A
Sbjct: 42 LVIECSSRPQKKATAHHKKTRPRKTQAWDIRRGPAVYAPLPPLPSEWSFASDESGQPAAA 101
Query: 364 QPVQSE 381
+S+
Sbjct: 102 GASESD 107
>ref|XP_004301446.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 114
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +1
Query: 184 LVIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEW-SLVSEDTSAAAP 360
LVIECSSRPQKKAT HH KTRPRKT D++R PTVY A+W L S D ++AA
Sbjct: 44 LVIECSSRPQKKATAHHRKTRPRKTAAWDVKRKPTVYAPLPPLPADWVFLNSSDDASAAD 103
Query: 361 PQPVQSE 381
P P Q +
Sbjct: 104 PSPPQEQ 110
>ref|NP_568358.1| plastid-specific 50S ribosomal protein 6 [Arabidopsis thaliana]
gi|75171293|sp|Q9FKP0.1|PSRP6_ARATH RecName: Full=50S
ribosomal protein 6, chloroplastic; AltName: Full=CL25;
AltName: Full=Plastid-specific 50S ribosomal protein 6;
Short=PSRP-6; Flags: Precursor
gi|10177888|dbj|BAB11220.1| unnamed protein product
[Arabidopsis thaliana] gi|14517428|gb|AAK62604.1|
AT5g17870/MPI7_10 [Arabidopsis thaliana]
gi|20147339|gb|AAM10383.1| AT5g17870/MPI7_10
[Arabidopsis thaliana] gi|21554906|gb|AAM63726.1|
plastid-specific ribosomal protein 6 precursor
(Psrp-6)-like [Arabidopsis thaliana]
gi|332005097|gb|AED92480.1| plastid-specific 50S
ribosomal protein 6 [Arabidopsis thaliana]
Length = 106
Score = 74.3 bits (181), Expect(2) = 1e-11
Identities = 37/60 (61%), Positives = 43/60 (71%), Gaps = 3/60 (5%)
Frame = +1
Query: 184 LVIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEWS---LVSEDTSAA 354
+VIECSSRPQKK+T HH KTRP+KT+P DI+R PTVY AEWS L S+D AA
Sbjct: 36 MVIECSSRPQKKSTAHHRKTRPKKTQPWDIKRKPTVYAPLPPLPAEWSPFTLASDDGGAA 95
Score = 20.8 bits (42), Expect(2) = 1e-11
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2
Query: 59 MSVSAIFGSRLV 94
MSVSAIFG+ +V
Sbjct: 1 MSVSAIFGTGIV 12
>ref|XP_004501081.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Cicer
arietinum]
Length = 103
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Frame = +1
Query: 184 LVIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEWSLV---SEDTSAA 354
L+IECSSRPQKK+T HHM+TRPRK++PSD R PTVY +W++V T+
Sbjct: 35 LLIECSSRPQKKSTAHHMQTRPRKSQPSDRNRKPTVYAPLPPLPPDWTVVITADASTAPV 94
Query: 355 APPQPVQS 378
APP P S
Sbjct: 95 APPPPTPS 102
>ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast precursor, putative
[Ricinus communis] gi|223550719|gb|EEF52205.1| 50S
ribosomal protein CL25, chloroplast precursor, putative
[Ricinus communis]
Length = 126
Score = 73.9 bits (180), Expect(2) = 2e-11
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = +1
Query: 184 LVIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEWSLVS 336
LVIECSSRP+KKAT HHMKTRP+K++P DIRR PTVY +W+LVS
Sbjct: 43 LVIECSSRPKKKATAHHMKTRPKKSQPWDIRRKPTVYPPLPPLPPDWTLVS 93
Score = 20.4 bits (41), Expect(2) = 2e-11
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +2
Query: 59 MSVSAIFGSRLVV 97
MS+S+IFGS +V+
Sbjct: 1 MSISSIFGSPVVL 13
>ref|XP_004979460.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Setaria
italica]
Length = 117
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/62 (53%), Positives = 41/62 (66%)
Frame = +1
Query: 184 LVIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEWSLVSEDTSAAAPP 363
L +ECSSRPQKK TKHHMKTRP+KT+P DI+R PT Y +W+LV+ + A
Sbjct: 40 LAVECSSRPQKKGTKHHMKTRPKKTQPWDIKRRPTQYPPLPQLPPDWTLVASSATVDAEQ 99
Query: 364 QP 369
P
Sbjct: 100 AP 101
>ref|NP_001150884.1| plastid-specific ribosomal protein 6 [Zea mays]
gi|195642604|gb|ACG40770.1| plastid-specific ribosomal
protein 6 precursor [Zea mays]
Length = 123
Score = 73.2 bits (178), Expect = 3e-11
Identities = 35/66 (53%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Frame = +1
Query: 184 LVIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEWSLVSE----DTSA 351
L +ECSSRPQKK TKHHMKTRP+KT+P DI+R PT Y +W+LV+ D
Sbjct: 45 LAVECSSRPQKKGTKHHMKTRPKKTQPWDIKRRPTQYPPLPPLPPDWTLVASGATVDVEE 104
Query: 352 AAPPQP 369
A P P
Sbjct: 105 AEAPAP 110
>ref|NP_001158969.1| plastid-specific ribosomal protein 6 [Zea mays]
gi|195615274|gb|ACG29467.1| plastid-specific ribosomal
protein 6 precursor [Zea mays]
gi|413925596|gb|AFW65528.1| plastid-specific ribosomal
protein 6 [Zea mays]
Length = 121
Score = 73.2 bits (178), Expect = 3e-11
Identities = 35/66 (53%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Frame = +1
Query: 184 LVIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEWSLVSE----DTSA 351
L +ECSSRPQKK TKHHMKTRP+KT+P DI+R PT Y +W+LV+ D
Sbjct: 43 LAVECSSRPQKKGTKHHMKTRPKKTQPWDIKRRPTQYPPLPPLPPDWTLVASGATVDVEE 102
Query: 352 AAPPQP 369
A P P
Sbjct: 103 AEAPAP 108
>gb|ESW09265.1| hypothetical protein PHAVU_009G113500g [Phaseolus vulgaris]
Length = 96
Score = 72.8 bits (177), Expect = 4e-11
Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Frame = +1
Query: 184 LVIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEWSLV---SEDTSAA 354
L I CSSRP+KKAT HHMKTRPRK++P DI R PTVY +W+L+ ++A
Sbjct: 30 LTIVCSSRPKKKATAHHMKTRPRKSQPWDINRKPTVYDPMPPLPPDWTLIIPADASSAAV 89
Query: 355 APPQP 369
APP P
Sbjct: 90 APPPP 94
>ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arabidopsis lyrata subsp.
lyrata] gi|297317621|gb|EFH48043.1| hypothetical protein
ARALYDRAFT_488653 [Arabidopsis lyrata subsp. lyrata]
Length = 108
Score = 72.0 bits (175), Expect(2) = 5e-11
Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 5/64 (7%)
Frame = +1
Query: 184 LVIECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEW---SLVSED--TS 348
+VIECSSRPQKK+T HH K+RP+KT+P DI+R PTVY AEW +L S+D +
Sbjct: 36 MVIECSSRPQKKSTAHHRKSRPKKTQPWDIKRKPTVYAPLPPLPAEWTPFTLASDDGGAT 95
Query: 349 AAAP 360
AAAP
Sbjct: 96 AAAP 99
Score = 20.8 bits (42), Expect(2) = 5e-11
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2
Query: 59 MSVSAIFGSRLV 94
MSVSAIFG+ +V
Sbjct: 1 MSVSAIFGTGIV 12
>ref|XP_002302374.1| plastid-specific ribosomal family protein [Populus trichocarpa]
gi|118486925|gb|ABK95296.1| unknown [Populus
trichocarpa] gi|222844100|gb|EEE81647.1|
plastid-specific ribosomal family protein [Populus
trichocarpa]
Length = 123
Score = 70.1 bits (170), Expect(2) = 5e-11
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +1
Query: 190 IECSSRPQKKATKHHMKTRPRKTRPSDIRRGPTVYXXXXXXXAEWSLVS 336
IECSSRPQKKAT HH KTRPRK++P DI+R PTVY +W+LVS
Sbjct: 46 IECSSRPQKKATAHHRKTRPRKSQPWDIKRKPTVYAPLPPLPPDWTLVS 94
Score = 22.7 bits (47), Expect(2) = 5e-11
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 59 MSVSAIFGSRLVVPPSFSAATKAAP 133
MSVS+IFGS ++ P S P
Sbjct: 1 MSVSSIFGSPFLLAPKPSTTPSFKP 25