BLASTX nr result

ID: Rehmannia22_contig00005783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00005783
         (503 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21475.3| unnamed protein product [Vitis vinifera]               78   1e-12
ref|XP_002528993.1| conserved hypothetical protein [Ricinus comm...    75   9e-12
ref|XP_002276726.1| PREDICTED: regulation of nuclear pre-mRNA do...    72   8e-11
ref|XP_002306330.1| hypothetical protein POPTR_0005s08240g [Popu...    66   5e-09

>emb|CBI21475.3| unnamed protein product [Vitis vinifera]
          Length = 473

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 51/121 (42%), Positives = 58/121 (47%)
 Frame = -1

Query: 500 QTSKKSXXXXXXXXXXXXXASTSSQYIMTSVLSTFAAEEAKNAGXXXXXXXXXXTPAXXX 321
           Q SK++             AS+SSQ IMTSVLSTFAAEEAKNAG                
Sbjct: 313 QASKRTAADIAAEVADKLTASSSSQLIMTSVLSTFAAEEAKNAGLTKTSTVSNSFTPMPS 372

Query: 320 XXXXXXXXXXXXXPGQISNSQSHYLSNPNPPSLQYMQPPGGITGPYDYGNLNQGPHPPGP 141
                              SQ+ Y   PNPPS QY+QP GGI  PY YG++   P PPGP
Sbjct: 373 NSKPENSMPTP-------TSQTQYHMLPNPPSQQYLQPSGGIMNPYGYGSI--PPLPPGP 423

Query: 140 P 138
           P
Sbjct: 424 P 424


>ref|XP_002528993.1| conserved hypothetical protein [Ricinus communis]
           gi|223531583|gb|EEF33412.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 514

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 52/134 (38%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
 Frame = -1

Query: 500 QTSKKSXXXXXXXXXXXXXASTSSQYIMTSVLSTFAAEEAKNAGXXXXXXXXXXTP---- 333
           +T+K+S             AS+SSQ IM SVLSTFAAEEAK+AG           P    
Sbjct: 312 KTTKRSAAAIAAEVADKLAASSSSQLIMHSVLSTFAAEEAKSAGLTKNSKPEKSLPISDP 371

Query: 332 ----------AXXXXXXXXXXXXXXXXPGQISNSQSHYLSNPNPPSLQYMQPPGGITGPY 183
                     A                  Q  +SQ+ Y   PNPPS QYMQP GGI  PY
Sbjct: 372 NVFMPAQSLTAPSNHSYQSVMLAPPTMQNQAPSSQAQYHMLPNPPSQQYMQPSGGIITPY 431

Query: 182 DYGNLNQGPHPPGP 141
            YG+++  P PPGP
Sbjct: 432 GYGSIS--PLPPGP 443


>ref|XP_002276726.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
           2-like [Vitis vinifera]
          Length = 524

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 53/148 (35%), Positives = 60/148 (40%), Gaps = 27/148 (18%)
 Frame = -1

Query: 500 QTSKKSXXXXXXXXXXXXXASTSSQYIMTSVLSTFAAEEAKNAGXXXXXXXXXXTP---- 333
           Q SK++             AS+SSQ IMTSVLSTFAAEEAKNAG                
Sbjct: 313 QASKRTAADIAAEVADKLTASSSSQLIMTSVLSTFAAEEAKNAGLTKTSTVSNSFTPMPS 372

Query: 332 -----------------------AXXXXXXXXXXXXXXXXPGQISNSQSHYLSNPNPPSL 222
                                  A                  Q   SQ+ Y   PNPPS 
Sbjct: 373 NSKPENSMPVSDPNVFMSTQTLTAPPNQPYQSVIIAPPTMQSQTPTSQTQYHMLPNPPSQ 432

Query: 221 QYMQPPGGITGPYDYGNLNQGPHPPGPP 138
           QY+QP GGI  PY YG++   P PPGPP
Sbjct: 433 QYLQPSGGIMNPYGYGSI--PPLPPGPP 458


>ref|XP_002306330.1| hypothetical protein POPTR_0005s08240g [Populus trichocarpa]
           gi|222855779|gb|EEE93326.1| hypothetical protein
           POPTR_0005s08240g [Populus trichocarpa]
          Length = 453

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 47/124 (37%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
 Frame = -1

Query: 500 QTSKKSXXXXXXXXXXXXXASTSSQYIMTSVLSTFAAEEAKNAGXXXXXXXXXXTPAXXX 321
           QT K++             AS+SSQ IM +VLSTFAAEEAKNA                 
Sbjct: 312 QTPKRTAAAIAAEVAEKLAASSSSQMIMHAVLSTFAAEEAKNA----------------- 354

Query: 320 XXXXXXXXXXXXXPGQISNSQSHYLSNPNPPSLQYMQPPGGITGPYDYGNLN-QGPHPPG 144
                          Q   +QS +   PNP S  Y+QP GGI  PY YGN +   P PP 
Sbjct: 355 -PKPETSLPVSDPNNQTPTTQSQFHILPNPSSQPYIQPGGGIATPYAYGNFSVLPPGPPP 413

Query: 143 PPSY 132
           PP Y
Sbjct: 414 PPPY 417


Top