BLASTX nr result
ID: Rehmannia22_contig00005490
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00005490
(659 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ01464.1| hypothetical protein PRUPE_ppa015000mg [Prunus pe... 112 5e-24
gb|EMJ14281.1| hypothetical protein PRUPE_ppa021229mg [Prunus pe... 108 3e-23
gb|EMJ00432.1| hypothetical protein PRUPE_ppa022146mg, partial [... 107 4e-23
gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobrom... 105 6e-22
gb|ABA94145.1| retrotransposon protein, putative, Ty3-gypsy subc... 103 4e-21
emb|CAN77801.1| hypothetical protein VITISV_031477 [Vitis vinifera] 101 4e-21
gb|EOX93606.1| DNA/RNA polymerases superfamily protein [Theobrom... 102 5e-21
ref|XP_004514883.1| PREDICTED: enzymatic polyprotein-like [Cicer... 104 5e-21
gb|EOY03146.1| Retrotransposon protein, putative [Theobroma cacao] 100 7e-21
gb|AAV32204.1| putative polyprotein [Oryza sativa Japonica Group] 104 7e-21
gb|EOY14212.1| Retrotransposon protein, Ty3-gypsy sub-class, put... 102 7e-21
ref|XP_006353601.1| PREDICTED: uncharacterized protein LOC102586... 102 9e-21
gb|AAK92543.1|AC051624_1 Putative retroelement [Oryza sativa Jap... 103 1e-20
gb|ABM55240.1| retrotransposon protein [Beta vulgaris] 101 1e-20
gb|AAP53928.1| retrotransposon protein, putative, Ty3-gypsy subc... 101 1e-20
gb|AAM74400.1|AC119149_15 Putative retroelement [Oryza sativa Ja... 103 1e-20
dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana... 102 1e-20
gb|AAX96226.1| retrotransposon protein, putative, Ty3-gypsy sub-... 103 2e-20
gb|ABA97516.1| retrotransposon protein, putative, Ty3-gypsy subc... 103 2e-20
ref|XP_004506381.1| PREDICTED: enzymatic polyprotein-like [Cicer... 104 2e-20
>gb|EMJ01464.1| hypothetical protein PRUPE_ppa015000mg [Prunus persica]
Length = 1493
Score = 112 bits (281), Expect(2) = 5e-24
Identities = 72/184 (39%), Positives = 105/184 (57%), Gaps = 5/184 (2%)
Frame = +3
Query: 93 MMTPFGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXX 272
++ PFGL+NAP MDLM+ VF YLD FVI FIDDILVYS +E H+K+L +V L+T
Sbjct: 683 LVMPFGLTNAPAAFMDLMNRVFRPYLDHFVIVFIDDILVYSQTLEGHKKHLRVV-LRTLR 741
Query: 273 XXXXXXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLD 452
D VVFLG++ + + I V P KVE + N W+ T + + S L
Sbjct: 742 RKQLYAKFSKCQFWLDIVVFLGHVISAEGIYVDPQKVEAIVN-WVQSTSVTEIRS--FLG 798
Query: 453 ITKGFGFF-KYIYIYSILDDP----TRKSEKFVWTEKCERSFK*FKRRLVSTSVLKILNT 617
+ G++ +++ +S + P TRK F WTE+CE+SF+ K+RL + VL + +
Sbjct: 799 LA---GYYRRFVEGFSSIAAPLTRLTRKDIAFEWTEECEQSFQELKKRLTTAPVLALPDN 855
Query: 618 IEDF 629
+F
Sbjct: 856 AGNF 859
Score = 24.6 bits (52), Expect(2) = 5e-24
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 43 EDLPSTTFNT*YRHYE 90
ED+P+T T Y HYE
Sbjct: 666 EDIPNTALRTRYGHYE 681
>gb|EMJ14281.1| hypothetical protein PRUPE_ppa021229mg [Prunus persica]
Length = 1194
Score = 108 bits (270), Expect(2) = 3e-23
Identities = 70/177 (39%), Positives = 101/177 (57%), Gaps = 5/177 (2%)
Frame = +3
Query: 93 MMTPFGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXX 272
++ PFGL+NAP MDLM+ VF YLD+FVI FIDDILVYS + H K+L++V L+T
Sbjct: 385 LVMPFGLTNAPAAFMDLMNRVFRRYLDRFVIVFIDDILVYSKSQKAHMKHLNLV-LRTLR 443
Query: 273 XXXXXXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLD 452
D+V FLG++ + + I V P K+E V N W+ T + + S L
Sbjct: 444 RRQLYAKFSKCQFWLDRVSFLGHVISAEGIYVDPQKIEAVVN-WLRPTSVTEIRS--FLG 500
Query: 453 ITKGFGFF-KYIYIYSILDDP----TRKSEKFVWTEKCERSFK*FKRRLVSTSVLKI 608
+ G++ +++ +S + P TRK KFVW++KCE SF K RL + VL +
Sbjct: 501 LA---GYYRRFVEGFSTIAAPLTYLTRKGVKFVWSDKCEESFIELKTRLTTAPVLAL 554
Score = 26.6 bits (57), Expect(2) = 3e-23
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 43 EDLPSTTFNT*YRHYE 90
ED+P T F T Y HYE
Sbjct: 368 EDMPKTAFRTRYGHYE 383
>gb|EMJ00432.1| hypothetical protein PRUPE_ppa022146mg, partial [Prunus persica]
Length = 737
Score = 107 bits (268), Expect(2) = 4e-23
Identities = 71/178 (39%), Positives = 101/178 (56%), Gaps = 5/178 (2%)
Frame = +3
Query: 93 MMTPFGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXX 272
++ PFGL+NAP MD+M+ +F YLDQFVI FIDD+L+YS EEHE++L IV L+T
Sbjct: 41 VVMPFGLTNAPAAFMDMMNRIFRPYLDQFVIVFIDDVLIYSKSQEEHEEHLRIV-LQTLK 99
Query: 273 XXXXXXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLD 452
QV FLG++ + K I V +KVE V N W I + S L
Sbjct: 100 ENQLYAKLSKCEFWLRQVKFLGHVISNKGISVDSSKVEAVLN-WSQPKNISEICS--FLG 156
Query: 453 ITKGFGFF-KYIYIYSILDDP----TRKSEKFVWTEKCERSFK*FKRRLVSTSVLKIL 611
+ G++ ++I +S + P T+K KF+WT++CE+SF+ K RL +L IL
Sbjct: 157 LA---GYYRRFIKDFSQIATPMTKLTQKGVKFIWTQECEKSFQELKTRLTIAPILIIL 211
Score = 26.6 bits (57), Expect(2) = 4e-23
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 43 EDLPSTTFNT*YRHYE 90
ED+P T F T Y HYE
Sbjct: 24 EDIPKTAFRTRYGHYE 39
>gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1515
Score = 105 bits (262), Expect(2) = 6e-22
Identities = 71/177 (40%), Positives = 96/177 (54%), Gaps = 5/177 (2%)
Frame = +3
Query: 93 MMTPFGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXX 272
++ PFGL+NAP MDLM+ VFH YLD+FVI FIDDILVYS D +EH +L IV L+T
Sbjct: 697 LVMPFGLTNAPAAFMDLMNRVFHPYLDKFVIVFIDDILVYSRDNDEHAAHLRIV-LQTLR 755
Query: 273 XXXXXXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLD 452
+VVFLG+I + I V P KVE + W P + L
Sbjct: 756 ERQLYAKFSKCEFWLQEVVFLGHIVSRTGIYVDPKKVEAILQ-W--EQPKTVTEIRSFLG 812
Query: 453 ITKGFGFF-KYIYIYSILDDP----TRKSEKFVWTEKCERSFK*FKRRLVSTSVLKI 608
+ G++ +++ +S++ P TRK KFVW + CE F+ K RL S VL +
Sbjct: 813 LA---GYYRRFVQGFSLVAAPLTRLTRKGVKFVWDDVCENRFQELKNRLTSAPVLTL 866
Score = 25.0 bits (53), Expect(2) = 6e-22
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 43 EDLPSTTFNT*YRHYE 90
+D+P T F T Y HYE
Sbjct: 680 QDVPKTAFRTRYGHYE 695
>gb|ABA94145.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 927
Score = 103 bits (258), Expect(2) = 4e-21
Identities = 65/173 (37%), Positives = 99/173 (57%), Gaps = 5/173 (2%)
Frame = +3
Query: 105 FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 284
FGL+NAP M+ M+ + H +LD F++ FIDDIL+YS D+EEHE++L +V L T
Sbjct: 309 FGLTNAPAYFMEAMNSMLHSFLDNFMVVFIDDILIYSKDVEEHERHLRMV-LGTLRENKF 367
Query: 285 XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 464
+V FLG++ + I V P+KV ++ GW T +K V S L +
Sbjct: 368 YAKLKKCEFWLPEVAFLGHVINQQGISVDPSKVLSIV-GWERSTNVKDVRS--FLGMA-- 422
Query: 465 FGFF-KYIYIYSILDDP----TRKSEKFVWTEKCERSFK*FKRRLVSTSVLKI 608
G++ +++ +SI+ P T K KF WT++CE SF+ K+RLV+ VL +
Sbjct: 423 -GYYRRFVKDFSIIAKPMTMLTHKDVKFQWTDQCECSFQQLKQRLVTAPVLTL 474
Score = 23.9 bits (50), Expect(2) = 4e-21
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 43 EDLPSTTFNT*YRHYE 90
ED+ T F+T Y HYE
Sbjct: 288 EDIEKTAFSTRYGHYE 303
>emb|CAN77801.1| hypothetical protein VITISV_031477 [Vitis vinifera]
Length = 855
Score = 101 bits (252), Expect(2) = 4e-21
Identities = 70/174 (40%), Positives = 93/174 (53%), Gaps = 2/174 (1%)
Frame = +3
Query: 93 MMTPFGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXX 272
++ PFGL+NAP +DLM+ VF YLD V+ FIDDILVYS EEHE+YL+IV L+T
Sbjct: 115 LVMPFGLTNAPAAFIDLMNRVFKPYLDPSVVVFIDDILVYSKSREEHERYLTIV-LQTLR 173
Query: 273 XXXXXXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLD 452
D+V FL ++ T I V P KV+ V N W R P + L
Sbjct: 174 DKQLYAKLKKCEFWLDKVSFLRHMVTKDGIXVDPGKVDVVSN-W--RRPNTVTEIRSFLG 230
Query: 453 ITKGFGFF--KYIYIYSILDDPTRKSEKFVWTEKCERSFK*FKRRLVSTSVLKI 608
+ + F + I L T+K KF W+ CERSF+ K+RLV+ +L I
Sbjct: 231 LXXYYRRFIEGFSKIALPLTRLTQKGVKFEWSNDCERSFQELKKRLVTAPILTI 284
Score = 26.2 bits (56), Expect(2) = 4e-21
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 43 EDLPSTTFNT*YRHYE 90
ED+P T F T Y HYE
Sbjct: 98 EDVPKTAFRTRYGHYE 113
>gb|EOX93606.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 920
Score = 102 bits (254), Expect(2) = 5e-21
Identities = 69/174 (39%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Frame = +3
Query: 93 MMTPFGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXX 272
++ PFGL+NAP + MDLM+ VFH YLD+FVI FIDDILVYS + +EH +L IV L+T
Sbjct: 456 LVMPFGLTNAPAVFMDLMNRVFHPYLDKFVIVFIDDILVYSKNDDEHAAHLRIV-LQTLR 514
Query: 273 XXXXXXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLD 452
+VVFLG++ + I V P K+E + RT + L
Sbjct: 515 ERQLYAKFSKREFWLKEVVFLGHVVSGVGIYVDPKKIEAILQWEQPRTVTEIRSFLGLAG 574
Query: 453 ITKGF--GFFKYIYIYSILDDPTRKSEKFVWTEKCERSFK*FKRRLVSTSVLKI 608
+ F GFF I + L TRK KF W + CE F+ K RL S +L +
Sbjct: 575 YYRRFVQGFF---LIAAPLTRLTRKGVKFEWDDVCENRFQELKNRLTSAPILTL 625
Score = 25.0 bits (53), Expect(2) = 5e-21
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 43 EDLPSTTFNT*YRHYE 90
+D+P T F T Y HYE
Sbjct: 439 QDVPKTAFRTRYGHYE 454
>ref|XP_004514883.1| PREDICTED: enzymatic polyprotein-like [Cicer arietinum]
Length = 761
Score = 104 bits (259), Expect(2) = 5e-21
Identities = 70/184 (38%), Positives = 102/184 (55%), Gaps = 5/184 (2%)
Frame = +3
Query: 93 MMTPFGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXX 272
++ PFG++N+P + MD M+ +FH YLD FV+ FIDDILVYS EE ++L IV L+T
Sbjct: 330 LVMPFGVTNSPAVFMDYMNQIFHPYLDSFVVVFIDDILVYSKTKEECGEHLRIV-LQTVK 388
Query: 273 XXXXXXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLD 452
++V +LG++ + I V PA VE+V W +TP + + L
Sbjct: 389 EKQLFAQLSKSQFSLEEVSYLGHVISKGGIVVDPAMVESVLE-W--KTPKLVIEIRSFLG 445
Query: 453 ITKGFGFF-KYIYIYSILDDP----TRKSEKFVWTEKCERSFK*FKRRLVSTSVLKILNT 617
+ G++ ++I +S L P T+K E FVW CE SFK +RL S S+L +LN
Sbjct: 446 LA---GYYRRFIKGFSKLALPLTKLTQKGELFVWDTHCENSFKELMKRLTSASILVLLNL 502
Query: 618 IEDF 629
E F
Sbjct: 503 SEPF 506
Score = 23.1 bits (48), Expect(2) = 5e-21
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 46 DLPSTTFNT*YRHYE 90
D+P + F T Y HYE
Sbjct: 314 DVPKSAFRTRYAHYE 328
>gb|EOY03146.1| Retrotransposon protein, putative [Theobroma cacao]
Length = 1480
Score = 100 bits (249), Expect(2) = 7e-21
Identities = 68/192 (35%), Positives = 100/192 (52%), Gaps = 8/192 (4%)
Frame = +3
Query: 93 MMTPFGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXX 272
++ FGL+NAP MDLM+ VF YLD+FV+ FIDDIL+YS EEHE++L IV L+
Sbjct: 763 LVMSFGLTNAPAAFMDLMNRVFKPYLDKFVVVFIDDILIYSKSREEHEQHLKIV-LQILR 821
Query: 273 XXXXXXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLD 452
++V FLG++ + + I+V K+E VE W T + + S L
Sbjct: 822 EHRLYAKFSKCEFWLERVAFLGHVVSREGIQVDTKKIEAVEK-WPRSTSVTEIRSFVGL- 879
Query: 453 ITKGFGFFK-----YIYIYSILDDPTRKSEKFVWTEKCERSFK*FKRRLVSTSVLKILNT 617
G+++ + I ++L TRK KF W++ CE SF+ K L + VL +L
Sbjct: 880 ----AGYYRRFVKDFSKIVALLTKLTRKDTKFEWSDACENSFEKLKACLTTAPVLSLLQG 935
Query: 618 IED---FCNLQG 644
FC+ G
Sbjct: 936 TGGYTVFCDASG 947
Score = 26.6 bits (57), Expect(2) = 7e-21
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 43 EDLPSTTFNT*YRHYE 90
ED+P T F T Y HYE
Sbjct: 746 EDIPKTAFRTRYGHYE 761
>gb|AAV32204.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1142
Score = 104 bits (260), Expect(2) = 7e-21
Identities = 66/179 (36%), Positives = 102/179 (56%), Gaps = 4/179 (2%)
Frame = +3
Query: 105 FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 284
FGL+NAP M+LM+ VF +LD+FV+ FIDDIL+YS EEHE++L +V L+
Sbjct: 482 FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLV-LEKLKEHQL 540
Query: 285 XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 464
+V FLG++ T + + V P+ VE+V I TP K V + G
Sbjct: 541 YAKFSKCDFWLTEVKFLGHVITAQGVAVDPSNVESV----IKWTPPKTVSQIRSFLVLAG 596
Query: 465 FGFFKYIYIYSILDDP----TRKSEKFVWTEKCERSFK*FKRRLVSTSVLKILNTIEDF 629
+ + ++I +S + P +K EKF WT +C++SF+ K++LVS VL + + ++DF
Sbjct: 597 Y-YRRFIENFSRIARPMTQLLKKDEKFKWTAECDKSFEELKKKLVSAPVLILPDQMKDF 654
Score = 22.3 bits (46), Expect(2) = 7e-21
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 43 EDLPSTTFNT*YRHYE 90
ED+P T F T Y YE
Sbjct: 461 EDIPKTAFTTRYGLYE 476
>gb|EOY14212.1| Retrotransposon protein, Ty3-gypsy sub-class, putative [Theobroma
cacao]
Length = 284
Score = 102 bits (253), Expect(2) = 7e-21
Identities = 67/176 (38%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Frame = +3
Query: 93 MMTPFGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXX 272
++ PFGL+NAP MDLM+ VFH YLD+FVI FIDDILVYS D +EH +L IV L+T
Sbjct: 59 LVMPFGLTNAPTAFMDLMNRVFHPYLDKFVIVFIDDILVYSRDNDEHAAHLRIV-LQTLR 117
Query: 273 XXXXXXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLD 452
+VVFLG++ + I V P KVE + +T + L+
Sbjct: 118 ERQLYAKFSKCEFWLQEVVFLGHVVSRTGIYVDPKKVEAILQWEQPKTVTEIRSFLGLVS 177
Query: 453 ITKGFGFFKYIYIYSILDDP----TRKSEKFVWTEKCERSFK*FKRRLVSTSVLKI 608
+ +++ +S++ P T K KFVW + CE F+ K RL S VL +
Sbjct: 178 Y-----YQRFVQGFSLIAAPLTRLTCKGVKFVWDDVCENRFQELKNRLTSAPVLTL 228
Score = 25.0 bits (53), Expect(2) = 7e-21
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 43 EDLPSTTFNT*YRHYE 90
+D+P T F T Y HYE
Sbjct: 42 QDVPKTAFRTRYGHYE 57
>ref|XP_006353601.1| PREDICTED: uncharacterized protein LOC102586067 [Solanum tuberosum]
Length = 881
Score = 102 bits (253), Expect(2) = 9e-21
Identities = 67/183 (36%), Positives = 96/183 (52%), Gaps = 8/183 (4%)
Frame = +3
Query: 105 FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 284
FGL+NAP + MDLM+ VF YLD FV+ FIDDIL+YS EEH+ +L +V L+
Sbjct: 643 FGLTNAPALFMDLMNRVFKPYLDSFVVVFIDDILIYSRGEEEHKGHLRVV-LQRLREEKL 701
Query: 285 XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 464
+V FLG++ + I+V P K + + N TP DI
Sbjct: 702 YAKYEKCEFWLKEVAFLGHVVSGDGIKVDPKKTDVIRNWPRPLTP---------SDIRSF 752
Query: 465 FG----FFKYIYIYSILDDP----TRKSEKFVWTEKCERSFK*FKRRLVSTSVLKILNTI 620
G + +++ +S L P T+K KFVW+++CE SF+ K RLVS +L + + I
Sbjct: 753 LGLAGYYRRFVEGFSSLASPMTKLTQKKAKFVWSDECEESFQTLKERLVSAPILSLPDGI 812
Query: 621 EDF 629
E F
Sbjct: 813 EGF 815
Score = 24.6 bits (52), Expect(2) = 9e-21
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 46 DLPSTTFNT*YRHYE 90
D+P T F T Y HYE
Sbjct: 623 DIPKTAFRTRYGHYE 637
>gb|AAK92543.1|AC051624_1 Putative retroelement [Oryza sativa Japonica Group]
gi|31431042|gb|AAP52880.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1773
Score = 103 bits (258), Expect(2) = 1e-20
Identities = 67/179 (37%), Positives = 102/179 (56%), Gaps = 4/179 (2%)
Frame = +3
Query: 105 FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 284
FGL+NAP M+LM+ VF +LD+FV+ FIDDIL+YS EEHE++L +V L+
Sbjct: 964 FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLV-LEKLKEHQL 1022
Query: 285 XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 464
+V FLG++ T + + V P+ VE+V W TP K V G
Sbjct: 1023 YAKFSKCDFWLTEVKFLGHVITAQGVAVDPSNVESVTK-W---TPPKTVSQIRSFLGLAG 1078
Query: 465 FGFFKYIYIYSILDDP----TRKSEKFVWTEKCERSFK*FKRRLVSTSVLKILNTIEDF 629
+ + ++I +S + P +K EKF WT +C++SF+ K++LVST VL + + ++DF
Sbjct: 1079 Y-YRRFIENFSRIARPMTQLLKKDEKFKWTAECDKSFEELKKKLVSTPVLILPDQMKDF 1136
Score = 22.3 bits (46), Expect(2) = 1e-20
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 43 EDLPSTTFNT*YRHYE 90
ED+P T F T Y YE
Sbjct: 943 EDIPKTAFTTRYGLYE 958
>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
Length = 1501
Score = 101 bits (252), Expect(2) = 1e-20
Identities = 64/181 (35%), Positives = 100/181 (55%), Gaps = 5/181 (2%)
Frame = +3
Query: 102 PFGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXX 281
PFGL+NAP I MDLM+ +FH +LD+FV+ FIDDIL+YS + EH+++L I+ L+T
Sbjct: 683 PFGLTNAPAIFMDLMNRIFHEFLDKFVVVFIDDILIYSRNETEHDEHLRII-LETLRKNQ 741
Query: 282 XXXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITK 461
++V FLG+ + + + V PAK++ V W TP + L +
Sbjct: 742 LYAKFSKCEFRLEKVAFLGHFVSKEGVSVDPAKIQAVSE-W--PTPKSVTDIRSFLGLA- 797
Query: 462 GFGFF-KYIYIYSILDDP----TRKSEKFVWTEKCERSFK*FKRRLVSTSVLKILNTIED 626
G++ +++ +S + P +K KF W EKCE +F+ K RL + VL + + E
Sbjct: 798 --GYYRRFVRDFSKIARPMTNLMKKETKFEWNEKCEEAFQILKDRLTTAPVLTLPDGNEG 855
Query: 627 F 629
F
Sbjct: 856 F 856
Score = 24.6 bits (52), Expect(2) = 1e-20
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 43 EDLPSTTFNT*YRHYE 90
+D+P T F T Y HYE
Sbjct: 663 KDVPKTAFRTRYGHYE 678
>gb|AAP53928.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1364
Score = 101 bits (251), Expect(2) = 1e-20
Identities = 66/179 (36%), Positives = 100/179 (55%), Gaps = 4/179 (2%)
Frame = +3
Query: 105 FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 284
FGL+NAP M+LM+ VF +LD+FV+ FIDDIL+YS EEHE++L +V L+
Sbjct: 708 FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLV-LEKLKEHQL 766
Query: 285 XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 464
+V FLG++ T + + V P VE+V W TP K V G
Sbjct: 767 YAKFSKCDFWLTEVKFLGHVITAQGVAVDPLNVESVTK-W---TPPKTVSQIRSFLGLAG 822
Query: 465 FGFFKYIYIYSILDDP----TRKSEKFVWTEKCERSFK*FKRRLVSTSVLKILNTIEDF 629
+ + ++I +S + P +K EKF WT +C++SF+ K++LVS VL + + ++DF
Sbjct: 823 Y-YRRFIENFSRIARPMTQLLKKDEKFKWTAECDKSFEELKKKLVSAPVLILPDQMKDF 880
Score = 25.0 bits (53), Expect(2) = 1e-20
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 43 EDLPSTTFNT*YRHYE 90
ED+P T F T YR YE
Sbjct: 687 EDIPKTAFTTRYRLYE 702
>gb|AAM74400.1|AC119149_15 Putative retroelement [Oryza sativa Japonica Group]
Length = 1300
Score = 103 bits (258), Expect(2) = 1e-20
Identities = 67/179 (37%), Positives = 102/179 (56%), Gaps = 4/179 (2%)
Frame = +3
Query: 105 FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 284
FGL+NAP M+LM+ VF +LD+FV+ FIDDIL+YS EEHE++L +V L+
Sbjct: 964 FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLV-LEKLKEHQL 1022
Query: 285 XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 464
+V FLG++ T + + V P+ VE+V W TP K V G
Sbjct: 1023 YAKFSKCDFWLTEVKFLGHVITAQGVAVDPSNVESVTK-W---TPPKTVSQIRSFLGLAG 1078
Query: 465 FGFFKYIYIYSILDDP----TRKSEKFVWTEKCERSFK*FKRRLVSTSVLKILNTIEDF 629
+ + ++I +S + P +K EKF WT +C++SF+ K++LVST VL + + ++DF
Sbjct: 1079 Y-YRRFIENFSRIARPMTQLLKKDEKFKWTAECDKSFEELKKKLVSTPVLILPDQMKDF 1136
Score = 22.3 bits (46), Expect(2) = 1e-20
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 43 EDLPSTTFNT*YRHYE 90
ED+P T F T Y YE
Sbjct: 943 EDIPKTAFTTRYGLYE 958
>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
Length = 1152
Score = 102 bits (255), Expect(2) = 1e-20
Identities = 67/184 (36%), Positives = 103/184 (55%), Gaps = 5/184 (2%)
Frame = +3
Query: 93 MMTPFGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXX 272
++ PFGL+NAP MDLM VF YLD+FV+ FIDDIL+YS D +EHE++L IV L+T
Sbjct: 333 LVMPFGLTNAPSAFMDLMQRVFMPYLDKFVVVFIDDILIYSKDEKEHEEHLRIV-LQTLK 391
Query: 273 XXXXXXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLD 452
QV FLG++ + I+V PAK+E V W T + + S L
Sbjct: 392 EKKLYAKFSKCEFWLKQVSFLGHVISGDGIQVDPAKIEAVSK-WPRPTTVTEIRS--FLG 448
Query: 453 ITKGFGFF-KYIYIYSILDDP----TRKSEKFVWTEKCERSFK*FKRRLVSTSVLKILNT 617
+ G++ K++ +S + P T+K+ KF W+++CE +F+ K +L VL +
Sbjct: 449 LA---GYYRKFVQDFSKIATPLTRLTQKNIKFEWSKECEEAFQTLKDKLTVAPVLALPEV 505
Query: 618 IEDF 629
+++
Sbjct: 506 FDNY 509
Score = 23.5 bits (49), Expect(2) = 1e-20
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 46 DLPSTTFNT*YRHYE 90
D P T F+T Y HYE
Sbjct: 317 DRPKTAFSTRYGHYE 331
>gb|AAX96226.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77549885|gb|ABA92682.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1285
Score = 103 bits (256), Expect(2) = 2e-20
Identities = 66/179 (36%), Positives = 101/179 (56%), Gaps = 4/179 (2%)
Frame = +3
Query: 105 FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 284
FGL+NAP M+LM+ VF +LD+FV+ FIDDIL+YS EEHE++L +V L+
Sbjct: 495 FGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLV-LEKLKEHQL 553
Query: 285 XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 464
+V FLG++ T + + V P+ VE+V W TP K V G
Sbjct: 554 YAKFSKCDFWLSEVKFLGHVITAQGVAVDPSNVESVTK-W---TPPKTVSQIRSFLGLAG 609
Query: 465 FGFFKYIYIYSILDDP----TRKSEKFVWTEKCERSFK*FKRRLVSTSVLKILNTIEDF 629
+ + ++I +S + P +K EKF WT +C++SF+ K++LVS VL + + ++DF
Sbjct: 610 Y-YRRFIENFSRIAQPMTQLLKKDEKFKWTAECDKSFEELKKKLVSAPVLILPDQMKDF 667
Score = 22.3 bits (46), Expect(2) = 2e-20
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 43 EDLPSTTFNT*YRHYE 90
ED+P T F T Y YE
Sbjct: 474 EDIPKTAFTTRYGLYE 489
>gb|ABA97516.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1113
Score = 103 bits (256), Expect(2) = 2e-20
Identities = 66/179 (36%), Positives = 101/179 (56%), Gaps = 4/179 (2%)
Frame = +3
Query: 105 FGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXXXXXX 284
FGL+NAP+ M+LM+ VF +LD+FV FIDDIL+YS EEHE++L +V L+
Sbjct: 466 FGLTNAPVFFMNLMNKVFMEFLDKFVAVFIDDILIYSKSEEEHEQHLRLV-LEKLKEHQL 524
Query: 285 XXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLDITKG 464
+V FLG++ T + + V PA VE+V W TP K V +G
Sbjct: 525 YAKFSKCDFWLSEVKFLGHVITAQGVAVDPANVESVTK-W---TPPKTVSQIRSFLGLQG 580
Query: 465 FGFFKYIYIYSILDDP----TRKSEKFVWTEKCERSFK*FKRRLVSTSVLKILNTIEDF 629
+ + ++I +S + P +K EKF W +C+++F+ K++LVS VL + N ++DF
Sbjct: 581 Y-YRRFIENFSRIARPMTQLLKKDEKFKWIAECDKNFEELKKKLVSAPVLVLPNQMKDF 638
Score = 22.3 bits (46), Expect(2) = 2e-20
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 43 EDLPSTTFNT*YRHYE 90
ED+P T F T Y YE
Sbjct: 445 EDIPKTAFTTRYGLYE 460
>ref|XP_004506381.1| PREDICTED: enzymatic polyprotein-like [Cicer arietinum]
Length = 690
Score = 104 bits (260), Expect = 2e-20
Identities = 69/174 (39%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Frame = +3
Query: 93 MMTPFGLSNAPIILMDLMSWVFHMYLDQFVIAFIDDILVYSMDIEEHEKYLSIVFLKTXX 272
++ FGL+NAP MDLM+ VF +LDQFVI FIDDILVYS EEHE++L +V L+T
Sbjct: 230 LVMSFGLTNAPAAFMDLMNRVFKPFLDQFVIVFIDDILVYSKSKEEHERHLMLV-LQTLR 288
Query: 273 XXXXXXXXXXXXXXXDQVVFLGYIFTLKDIEVYPAKVENVENGWILRTPIKCVVS*ALLD 452
D V FLG++ + I V P+KVE V N W T +K + S L
Sbjct: 289 DKQLYAKFSKCQFWLDSVAFLGHVVSKNGISVDPSKVEAVHN-WPRPTTVKEIQS--FLG 345
Query: 453 ITKGFGFF--KYIYIYSILDDPTRKSEKFVWTEKCERSFK*FKRRLVSTSVLKI 608
+ + F + + S L T+K KF WT C SF+ K L S +L +
Sbjct: 346 LAGYYRHFVKDFSKVASSLTRLTQKKVKFRWTNACAESFQKLKEYLTSAPILAL 399