BLASTX nr result
ID: Rehmannia22_contig00005205
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00005205
(1174 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006468290.1| PREDICTED: cleavage and polyadenylation spec... 569 e-160
ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citr... 566 e-159
ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation spec... 566 e-159
ref|XP_004486563.1| PREDICTED: cleavage and polyadenylation spec... 565 e-158
gb|EPS64393.1| hypothetical protein M569_10389, partial [Genlise... 563 e-158
gb|EOX96971.1| Cleavage and polyadenylation specificity factor 3... 563 e-158
ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation spec... 563 e-158
gb|ESW19498.1| hypothetical protein PHAVU_006G130200g [Phaseolus... 563 e-158
ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation spec... 558 e-156
ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm... 555 e-155
gb|EXB51974.1| Cleavage and polyadenylation specificity factor C... 550 e-154
ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation spec... 544 e-152
ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation spec... 544 e-152
gb|EMJ15374.1| hypothetical protein PRUPE_ppa019072mg [Prunus pe... 543 e-152
ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation spec... 543 e-152
ref|XP_002893618.1| hypothetical protein ARALYDRAFT_890588 [Arab... 537 e-150
ref|XP_004295608.1| PREDICTED: cleavage and polyadenylation spec... 536 e-150
ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation spec... 534 e-149
ref|XP_004233145.1| PREDICTED: cleavage and polyadenylation spec... 532 e-149
ref|NP_174334.2| cleavage and polyadenylation specificity factor... 532 e-149
>ref|XP_006468290.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Citrus sinensis]
Length = 683
Score = 569 bits (1466), Expect = e-160
Identities = 277/373 (74%), Positives = 303/373 (81%), Gaps = 2/373 (0%)
Frame = -1
Query: 1144 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 965
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVYKHTNEDI
Sbjct: 52 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDI 111
Query: 964 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 785
KECNMYKLGFCPNGPDCRYRH KLPGPPP VEE+LQKIQQ++SYNHG
Sbjct: 112 KECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKHFQQRGAFS 171
Query: 784 XQTEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXQIPNLLNSQQN 611
QT+K QF QGPN NQ GK+S ES NV Q+ NL N N
Sbjct: 172 HQTDKSQFSQGPNAVNQGAAGKSSTAESANV-HQQQLVQQPQQQGTQTTQMQNLPNGLPN 230
Query: 610 QASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIF 431
Q +R ATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+S +NVILIF
Sbjct: 231 QTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIF 290
Query: 430 SVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRN 251
SVN+TRHFQGCAKMTS+IGG VGGGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLRN
Sbjct: 291 SVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRN 350
Query: 250 PFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLEN 71
P+NENLPVKISRDCQELEPS+GEQLA+LLYLEPDS+LMA+S+ KGV+ +N
Sbjct: 351 PYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDN 410
Query: 70 ASENPDIVPFEDN 32
+NPDIVPFEDN
Sbjct: 411 GGDNPDIVPFEDN 423
>ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
gi|557551535|gb|ESR62164.1| hypothetical protein
CICLE_v10014454mg [Citrus clementina]
Length = 701
Score = 567 bits (1460), Expect = e-159
Identities = 276/373 (73%), Positives = 302/373 (80%), Gaps = 2/373 (0%)
Frame = -1
Query: 1144 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 965
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVYKHTNEDI
Sbjct: 70 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDI 129
Query: 964 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 785
KECNMYKLGFCPNGPDCRYRH KLPGPPP VEE+LQKIQQ++SYNHG
Sbjct: 130 KECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKLFQQRGAFS 189
Query: 784 XQTEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXQIPNLLNSQQN 611
Q +K QF QGPN NQ GK+S ES NV Q+ NL N N
Sbjct: 190 HQIDKSQFSQGPNAVNQGAAGKSSTAESANV-HQQQLVQQPQQQGTQTTQMQNLPNGLPN 248
Query: 610 QASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIF 431
Q +R ATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+S +NVILIF
Sbjct: 249 QTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIF 308
Query: 430 SVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRN 251
SVN+TRHFQGCAKMTS+IGG VGGGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLRN
Sbjct: 309 SVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRN 368
Query: 250 PFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLEN 71
P+NENLPVKISRDCQELEPS+GEQLA+LLYLEPDS+LMA+S+ KGV+ +N
Sbjct: 369 PYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDN 428
Query: 70 ASENPDIVPFEDN 32
+NPDIVPFEDN
Sbjct: 429 GGDNPDIVPFEDN 441
>ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Glycine max]
Length = 691
Score = 566 bits (1459), Expect = e-159
Identities = 279/374 (74%), Positives = 302/374 (80%), Gaps = 3/374 (0%)
Frame = -1
Query: 1144 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 965
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 67 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDI 126
Query: 964 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 785
KECNMYKLGFCPNGPDCRYRHAK PGPPPPVEE+LQKIQ L SYN+
Sbjct: 127 KECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLFSYNYNSSNKFFQQRGASY 186
Query: 784 XQ-TEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXQIPNLLNSQQ 614
Q EKPQ PQG N TNQ GK ESGN Q+ N+ N Q
Sbjct: 187 NQQAEKPQLPQGTNSTNQGVTGKPLPAESGNA--QPQQQVQQSQQQVNQSQMQNVANGQP 244
Query: 613 NQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILI 434
NQA+RTATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNE+KLNEAF+SV+NVIL+
Sbjct: 245 NQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILV 304
Query: 433 FSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLR 254
FSVN+TRHFQGCAKMTSRIGG V GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLR
Sbjct: 305 FSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR 364
Query: 253 NPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLE 74
NP+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+S+ KGV+ +
Sbjct: 365 NPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEKAKGVNPD 424
Query: 73 NASENPDIVPFEDN 32
N ENPDIVPFEDN
Sbjct: 425 NGGENPDIVPFEDN 438
>ref|XP_004486563.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Cicer arietinum]
Length = 677
Score = 565 bits (1456), Expect = e-158
Identities = 280/374 (74%), Positives = 302/374 (80%), Gaps = 3/374 (0%)
Frame = -1
Query: 1144 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 965
RRSFRQTVCRHWLRSLCMKG+ACGFLHQYDK+RMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 62 RRSFRQTVCRHWLRSLCMKGEACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDI 121
Query: 964 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYN-HGXXXXXXXXXXXX 788
KECNMYKLGFCPNGPDCRYRHAK PGPPPP+EE+LQKIQ L SYN +
Sbjct: 122 KECNMYKLGFCPNGPDCRYRHAKSPGPPPPIEEVLQKIQHLYSYNFNNSHKFIQQRGSSY 181
Query: 787 XXQTEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXQIPNLLNSQQ 614
Q EK QFPQG N NQ GK ESGNV Q NL N Q
Sbjct: 182 TQQVEKSQFPQGINSANQGVAGKPLAAESGNV--QQQQQVQQSQQQVSQIQTQNLANGQP 239
Query: 613 NQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILI 434
NQA+RTATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNE+KLNEAF+SV+NVILI
Sbjct: 240 NQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILI 299
Query: 433 FSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLR 254
FSVN+TRHFQGCAKMTSRIGG V GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLR
Sbjct: 300 FSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR 359
Query: 253 NPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLE 74
NP+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+S+ KGV+ +
Sbjct: 360 NPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISIAAESKREEEKAKGVNPD 419
Query: 73 NASENPDIVPFEDN 32
NA ENPDIVPFEDN
Sbjct: 420 NAGENPDIVPFEDN 433
>gb|EPS64393.1| hypothetical protein M569_10389, partial [Genlisea aurea]
Length = 655
Score = 563 bits (1452), Expect = e-158
Identities = 278/373 (74%), Positives = 302/373 (80%), Gaps = 2/373 (0%)
Frame = -1
Query: 1144 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 965
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 68 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 127
Query: 964 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 785
KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEE+LQ++QQL+S N+G
Sbjct: 128 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQRVQQLSSNNYGNLNKYFPNRTTAF 187
Query: 784 XQ-TEKPQFPQGPNGTNQVGKTSMTESGNVLXXXXXXXXXXXXXXXXXQIPNLLNSQQNQ 608
++K QFPQ NG N + K+ +S + QI N +QQ Q
Sbjct: 188 SHQSDKSQFPQVQNGANHLTKSGTADSASA-HPQSQQAQQPLPQSSQAQIQNAPINQQTQ 246
Query: 607 ASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIFS 428
A+R ATPLPQGTSRYFVVKSCN ENLELSVQQGVWATQRSNEAKLNEAFES++NVILIFS
Sbjct: 247 ANRVATPLPQGTSRYFVVKSCNRENLELSVQQGVWATQRSNEAKLNEAFESIENVILIFS 306
Query: 427 VNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRNP 248
VNKTRHFQGCAKM SRIGGF+GGGNWKHA GTAHYGRNFAVKWLKL ELSF+KTRHLRNP
Sbjct: 307 VNKTRHFQGCAKMASRIGGFIGGGNWKHANGTAHYGRNFAVKWLKLSELSFDKTRHLRNP 366
Query: 247 FNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLEN- 71
+NENLPVKISRDCQELEPSVGEQLASLLYLEPDSDL AV L +GV+++N
Sbjct: 367 YNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLTAVLLAAETKREQEKARGVTVDNG 426
Query: 70 ASENPDIVPFEDN 32
+E+PDIVPFEDN
Sbjct: 427 TAEDPDIVPFEDN 439
>gb|EOX96971.1| Cleavage and polyadenylation specificity factor 30 [Theobroma cacao]
Length = 698
Score = 563 bits (1452), Expect = e-158
Identities = 278/373 (74%), Positives = 302/373 (80%), Gaps = 2/373 (0%)
Frame = -1
Query: 1144 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 965
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVYKHTNEDI
Sbjct: 70 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDI 129
Query: 964 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 785
KECNMYKLGFCPNG DCRYRHAKLPGPPPPVEE+LQKIQQL+SYN+
Sbjct: 130 KECNMYKLGFCPNGADCRYRHAKLPGPPPPVEEVLQKIQQLSSYNYNKFFQQRNSGFAQQ 189
Query: 784 XQTEKPQFPQGPNGTNQV--GKTSMTESGNVLXXXXXXXXXXXXXXXXXQIPNLLNSQQN 611
TEK Q PQG N NQ GK S TES N+ QI N+ N Q N
Sbjct: 190 --TEKSQIPQGQNNVNQGAGGKPSTTESANM--HPQQQVQQPQQQVSQTQIQNVPNGQSN 245
Query: 610 QASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIF 431
QA++TA PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+S +NVILIF
Sbjct: 246 QANKTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIF 305
Query: 430 SVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRN 251
SVN+TRHFQGCAKMTS+IGG V GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLRN
Sbjct: 306 SVNRTRHFQGCAKMTSKIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRN 365
Query: 250 PFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLEN 71
P+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+S+ KGV+ +N
Sbjct: 366 PYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAELKREEEKAKGVNSDN 425
Query: 70 ASENPDIVPFEDN 32
ENPDIVPFEDN
Sbjct: 426 GGENPDIVPFEDN 438
>ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Vitis vinifera]
Length = 673
Score = 563 bits (1451), Expect = e-158
Identities = 277/373 (74%), Positives = 303/373 (81%), Gaps = 2/373 (0%)
Frame = -1
Query: 1144 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 965
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 57 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 116
Query: 964 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 785
KECNMYKLGFCPNG DCRYRHAKLPGPPP +EE+ QKIQQL+S+N+G
Sbjct: 117 KECNMYKLGFCPNGSDCRYRHAKLPGPPPTMEEVFQKIQQLSSFNYGSSNRFYQNRNPYN 176
Query: 784 XQTEKPQFPQGPNGTN--QVGKTSMTESGNVLXXXXXXXXXXXXXXXXXQIPNLLNSQQN 611
QTEK Q QG N N V K+S TE+ NV +PN L N
Sbjct: 177 QQTEKSQILQGSNAVNLGTVAKSSTTEAINVQQQQVQPPQQQVSQTPMQNLPNGL---PN 233
Query: 610 QASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIF 431
QA++TA+PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+SV+NVILIF
Sbjct: 234 QANKTASPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSVENVILIF 293
Query: 430 SVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRN 251
SVN+TRHFQGCAKMTS+IGGFVGGGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLRN
Sbjct: 294 SVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRN 353
Query: 250 PFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLEN 71
P+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+SL KGV+ +N
Sbjct: 354 PYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAESKREEEKAKGVNPDN 413
Query: 70 ASENPDIVPFEDN 32
ENPDIVPFEDN
Sbjct: 414 GGENPDIVPFEDN 426
>gb|ESW19498.1| hypothetical protein PHAVU_006G130200g [Phaseolus vulgaris]
Length = 697
Score = 563 bits (1450), Expect = e-158
Identities = 280/374 (74%), Positives = 299/374 (79%), Gaps = 3/374 (0%)
Frame = -1
Query: 1144 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 965
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 65 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDI 124
Query: 964 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 785
KECNMYKLGFCPNGPDCRYRHAK PGPPPPVEE+LQKIQ L SYN+
Sbjct: 125 KECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSNKFFQQRGSSY 184
Query: 784 XQ-TEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXQIPNLLNSQQ 614
Q EK Q PQG N TNQ GK ESGN QI N+ N Q
Sbjct: 185 TQQAEKSQLPQGTNSTNQGVTGKPLPAESGNA-QPQQQVQQSQQQQVSQNQIQNVANGQP 243
Query: 613 NQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILI 434
NQASR ATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNE+KLNEAF+SV+NVILI
Sbjct: 244 NQASRAATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILI 303
Query: 433 FSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLR 254
FSVN+TRHFQGCAKMTSRIGG V GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLR
Sbjct: 304 FSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR 363
Query: 253 NPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLE 74
NP+NENLPVKISRDCQELEPS+GEQLASLLYLEPD +LMAVS+ KGV+ +
Sbjct: 364 NPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAESKREEEKAKGVNPD 423
Query: 73 NASENPDIVPFEDN 32
N ENPDIVPFEDN
Sbjct: 424 NGGENPDIVPFEDN 437
>ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Glycine max]
Length = 681
Score = 558 bits (1438), Expect = e-156
Identities = 276/374 (73%), Positives = 299/374 (79%), Gaps = 3/374 (0%)
Frame = -1
Query: 1144 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 965
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 67 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDI 126
Query: 964 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 785
KECNMYKLGFCPNGPDCRYRHAK PGPPPPVEE+LQKIQ L SYN+
Sbjct: 127 KECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSNKFFQQRGASY 186
Query: 784 XQ-TEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXQIPNLLNSQQ 614
Q EKP PQG N TNQ G E GN Q+ N+ N Q
Sbjct: 187 NQQAEKPLLPQGNNSTNQGVTGNPLPAELGNA--QPQQQVQQSQQQVNQSQMQNVANGQP 244
Query: 613 NQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILI 434
NQA+RTATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNE+KLNEAF+SV+NVILI
Sbjct: 245 NQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILI 304
Query: 433 FSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLR 254
FSVN+TRHFQGCAKMTS+IGG V GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLR
Sbjct: 305 FSVNRTRHFQGCAKMTSKIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR 364
Query: 253 NPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLE 74
NP+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+S+ KGV+ +
Sbjct: 365 NPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEKAKGVNPD 424
Query: 73 NASENPDIVPFEDN 32
N ENPDIVPFEDN
Sbjct: 425 NGGENPDIVPFEDN 438
>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
gi|223537608|gb|EEF39232.1| conserved hypothetical
protein [Ricinus communis]
Length = 702
Score = 555 bits (1430), Expect = e-155
Identities = 279/379 (73%), Positives = 297/379 (78%), Gaps = 8/379 (2%)
Frame = -1
Query: 1144 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 965
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 70 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 129
Query: 964 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 785
KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEE+LQKIQQL SYN+G
Sbjct: 130 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLNSYNYGSSNKFFQQRGAGF 189
Query: 784 XQ-TEKPQFPQGPN--GTNQVGKTSMTESGNVLXXXXXXXXXXXXXXXXXQIP-----NL 629
Q +K QF QGPN G K TES NV Q NL
Sbjct: 190 QQHADKSQFSQGPNNMGQGMAAKPPGTESANVQQPQQQQPQPGQGQQSQQQATQTPTQNL 249
Query: 628 LNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVD 449
N Q NQA+RTA PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+S +
Sbjct: 250 PNGQPNQANRTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAE 309
Query: 448 NVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNK 269
NVILIFSVN+TRHFQGCAKMTS+IG VGGGNWK+A+GTAHYGRNF+VKWLKL ELSF+K
Sbjct: 310 NVILIFSVNRTRHFQGCAKMTSKIGASVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHK 369
Query: 268 TRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXK 89
TRHLRNP+NENLPVKISRDCQELEPSVG QLA LLY EPDS+LMA+SL K
Sbjct: 370 TRHLRNPYNENLPVKISRDCQELEPSVGGQLACLLYDEPDSELMAISLAAEAKREEEKAK 429
Query: 88 GVSLENASENPDIVPFEDN 32
GV+ EN +NPDIVPFEDN
Sbjct: 430 GVNPENGGDNPDIVPFEDN 448
>gb|EXB51974.1| Cleavage and polyadenylation specificity factor CPSF30 [Morus
notabilis]
Length = 710
Score = 550 bits (1418), Expect = e-154
Identities = 272/373 (72%), Positives = 293/373 (78%), Gaps = 3/373 (0%)
Frame = -1
Query: 1141 RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIK 962
RSFRQTVCRHWLRSLCMKG+ACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIK
Sbjct: 74 RSFRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIK 133
Query: 961 ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYN-HGXXXXXXXXXXXXX 785
ECNMYKLGFCPNGPDCRYRHAKLPGPPP VEE+LQKIQ L+SYN H
Sbjct: 134 ECNMYKLGFCPNGPDCRYRHAKLPGPPPSVEEVLQKIQHLSSYNYHSNKFFQQRNAGGFA 193
Query: 784 XQTEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXQIPNLLNSQQN 611
EKP P GPN +Q VGK S+ ES NV QI N+ N
Sbjct: 194 QLGEKPLLPLGPNAVSQGVVGKPSILESANV-QQPQQQVQPSQQPVGQNQIQNVFTGLPN 252
Query: 610 QASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIF 431
QA+RT PLP G SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+ +NVILIF
Sbjct: 253 QANRTVAPLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDCAENVILIF 312
Query: 430 SVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRN 251
SVN+TRHFQGCAKM SRIGG + GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLRN
Sbjct: 313 SVNRTRHFQGCAKMISRIGGSISGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRN 372
Query: 250 PFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLEN 71
P+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+SL KGV +N
Sbjct: 373 PYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAESKREEEKAKGVDPDN 432
Query: 70 ASENPDIVPFEDN 32
ENPDIVPFEDN
Sbjct: 433 GGENPDIVPFEDN 445
>ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Cucumis sativus]
Length = 707
Score = 544 bits (1402), Expect = e-152
Identities = 273/374 (72%), Positives = 292/374 (78%), Gaps = 3/374 (0%)
Frame = -1
Query: 1144 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 965
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP+CRFFRLYGECREQDCVYKHTNEDI
Sbjct: 72 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTNEDI 131
Query: 964 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 785
KECNMYK GFCPNGPDCRYRHAKLPGPPPP+EEILQKIQ L SYN+G
Sbjct: 132 KECNMYKFGFCPNGPDCRYRHAKLPGPPPPLEEILQKIQHLGSYNYGPSNKFFTQRGVGL 191
Query: 784 XQ-TEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXQIPNLLNSQQ 614
Q EK QFPQ P Q GK S ES NV + +L N Q
Sbjct: 192 SQQNEKSQFPQVPALVTQGVTGKPSAAESVNV---QQQQGQQSAPQASQTPVQSLSNGQP 248
Query: 613 NQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILI 434
NQ +R AT LPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+S DNVILI
Sbjct: 249 NQLNRNATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSADNVILI 308
Query: 433 FSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLR 254
FSVN+TRHFQGCAKM SRIGG V GGNWK+A+GT HYG+NF++KWLKL ELSF KTRHLR
Sbjct: 309 FSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTPHYGQNFSLKWLKLCELSFQKTRHLR 368
Query: 253 NPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLE 74
NP+NENLPVKISRDCQELEPSVGEQLASLLYLEPD +LMAVS+ KGV+ +
Sbjct: 369 NPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDGELMAVSVAAESKREEEKAKGVNPD 428
Query: 73 NASENPDIVPFEDN 32
SENPDIVPFEDN
Sbjct: 429 IGSENPDIVPFEDN 442
>ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum tuberosum]
Length = 692
Score = 544 bits (1401), Expect = e-152
Identities = 269/373 (72%), Positives = 292/373 (78%), Gaps = 2/373 (0%)
Frame = -1
Query: 1144 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 965
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP+CRFFRLYGECREQDCVYKHT EDI
Sbjct: 66 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTIEDI 125
Query: 964 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHG-XXXXXXXXXXXX 788
KECNMYKLGFCPNGPDCRYRHAK+PGPPPPVEEILQKIQ L SYN+G
Sbjct: 126 KECNMYKLGFCPNGPDCRYRHAKMPGPPPPVEEILQKIQHLASYNYGYSNRFNQNRNANY 185
Query: 787 XXQTEKPQFPQGPNGTNQVGKTSMTESGNVLXXXXXXXXXXXXXXXXXQIPNL-LNSQQN 611
Q++K Q Q NG + K++ TE+ + + N QQN
Sbjct: 186 STQSDKSQASQAQNGMSLAVKSTATETPIIQQHQPNQQVQPPQLQGGPTQAQIHPNGQQN 245
Query: 610 QASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIF 431
QA RTA LPQGTSRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+SV+NVILIF
Sbjct: 246 QADRTAVVLPQGTSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSVENVILIF 305
Query: 430 SVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRN 251
SVN+TRHFQGC KMTSRIGG GGNWKH +GTAHYGRNF+VKWLKL ELSF KT HLRN
Sbjct: 306 SVNRTRHFQGCGKMTSRIGGAANGGNWKHEHGTAHYGRNFSVKWLKLCELSFQKTHHLRN 365
Query: 250 PFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLEN 71
P+NENLPVKISRDCQELEPSVGEQLASLLYLEPDS+LMA+SL KGV+ +N
Sbjct: 366 PYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISLAAESKRQEEKAKGVNPDN 425
Query: 70 ASENPDIVPFEDN 32
+NPDIVPFEDN
Sbjct: 426 GKDNPDIVPFEDN 438
>gb|EMJ15374.1| hypothetical protein PRUPE_ppa019072mg [Prunus persica]
Length = 695
Score = 543 bits (1400), Expect = e-152
Identities = 274/373 (73%), Positives = 296/373 (79%), Gaps = 3/373 (0%)
Frame = -1
Query: 1141 RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIK 962
RS+RQTVCRHWLRSLCMKG+ACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIK
Sbjct: 66 RSYRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIK 125
Query: 961 ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXXX 782
ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEE+LQKIQ L SYN+
Sbjct: 126 ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQHLNSYNYNTSNKFYQQRNAGFP 185
Query: 781 Q-TEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXQIPNLLNSQQN 611
Q +K Q QGPN Q VGK S ES NV Q NL N N
Sbjct: 186 QQADKYQSAQGPNSVYQGVVGKPSTGESANV--HQQQQVQQTQQQVGHTQTQNLPNGLAN 243
Query: 610 QASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIF 431
QA+R+A PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNE+KLNEAF+S +NVILIF
Sbjct: 244 QANRSA-PLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSAENVILIF 302
Query: 430 SVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRN 251
SVN+TRHFQGCAKM SRIGG V GGNWK+A+G+AHYGRNF+VKWLKL ELSF+KTRHLRN
Sbjct: 303 SVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGSAHYGRNFSVKWLKLCELSFHKTRHLRN 362
Query: 250 PFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLEN 71
P+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMAVS+ KGV+ EN
Sbjct: 363 PYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAVSIAAESKREEEKAKGVNPEN 422
Query: 70 ASENPDIVPFEDN 32
ENPDIVPFEDN
Sbjct: 423 GGENPDIVPFEDN 435
>ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum lycopersicum]
Length = 689
Score = 543 bits (1399), Expect = e-152
Identities = 269/373 (72%), Positives = 292/373 (78%), Gaps = 2/373 (0%)
Frame = -1
Query: 1144 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 965
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP+CRFFRLYGECREQDCVYKHT EDI
Sbjct: 65 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTIEDI 124
Query: 964 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHG-XXXXXXXXXXXX 788
KECNMYKLGFCPNGPDCRYRHAK+PGPPPPVEEILQKIQ L S N+G
Sbjct: 125 KECNMYKLGFCPNGPDCRYRHAKMPGPPPPVEEILQKIQHLASNNYGYSNRFNQNRNANY 184
Query: 787 XXQTEKPQFPQGPNGTNQVGKTSMTESGNVLXXXXXXXXXXXXXXXXXQIPNL-LNSQQN 611
QT+K Q Q NGT+ K++ TE+ + + N QQN
Sbjct: 185 STQTDKSQASQAQNGTSLAVKSTATETPIIQQHQPHQQVQPPQLQGGPTQAQIHPNGQQN 244
Query: 610 QASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIF 431
QA RTA LPQGTSRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+SV+NVILIF
Sbjct: 245 QADRTAVVLPQGTSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSVENVILIF 304
Query: 430 SVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRN 251
SVN+TRHFQGC KMTSRIGG GGNWKH +GTAHYGRNF++KWLKL ELSF KT HLRN
Sbjct: 305 SVNRTRHFQGCGKMTSRIGGAANGGNWKHEHGTAHYGRNFSLKWLKLCELSFQKTHHLRN 364
Query: 250 PFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLEN 71
P+NENLPVKISRDCQELEPSVGEQLASLLYLEPDS+LMA+SL KGV+ +N
Sbjct: 365 PYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISLAAESKRLEEKAKGVNPDN 424
Query: 70 ASENPDIVPFEDN 32
+NPDIVPFEDN
Sbjct: 425 GKDNPDIVPFEDN 437
>ref|XP_002893618.1| hypothetical protein ARALYDRAFT_890588 [Arabidopsis lyrata subsp.
lyrata] gi|297339460|gb|EFH69877.1| hypothetical protein
ARALYDRAFT_890588 [Arabidopsis lyrata subsp. lyrata]
Length = 631
Score = 537 bits (1383), Expect = e-150
Identities = 264/370 (71%), Positives = 292/370 (78%)
Frame = -1
Query: 1141 RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIK 962
RSFRQTVCRHWLR LCMKGDACGFLHQYDK+RMP+CRFFRLYGECREQDCVYKHTNEDIK
Sbjct: 59 RSFRQTVCRHWLRGLCMKGDACGFLHQYDKARMPICRFFRLYGECREQDCVYKHTNEDIK 118
Query: 961 ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXXX 782
ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEE+LQKIQQLTSYN+G
Sbjct: 119 ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTSYNYGPNRFYQPRNVA--- 175
Query: 781 QTEKPQFPQGPNGTNQVGKTSMTESGNVLXXXXXXXXXXXXXXXXXQIPNLLNSQQNQAS 602
PQ P G + + E+GN+ QIPN +Q +
Sbjct: 176 ----PQLQDKPQG-QVLTQGQPQEAGNLQQQQQQQPQQSQHQVSQTQIPN----PADQTN 226
Query: 601 RTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIFSVN 422
RT+ PLPQG +RYFVVKSCN EN ELSVQQGVWATQRSNE+KLNEAF+SV+NVILIFSVN
Sbjct: 227 RTSHPLPQGVNRYFVVKSCNRENFELSVQQGVWATQRSNESKLNEAFDSVENVILIFSVN 286
Query: 421 KTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRNPFN 242
+TRHFQGCAKMTSRIG ++GGGNWKH +GTA YGRNF+VKWLKL ELSF+KTR+LRNP+N
Sbjct: 287 RTRHFQGCAKMTSRIGSYIGGGNWKHEHGTAQYGRNFSVKWLKLCELSFHKTRNLRNPYN 346
Query: 241 ENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLENASE 62
ENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMA+S+ KGV+ E+ +E
Sbjct: 347 ENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAISIAAEAKREEEKAKGVNPESRAE 406
Query: 61 NPDIVPFEDN 32
NPDIVPFEDN
Sbjct: 407 NPDIVPFEDN 416
>ref|XP_004295608.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Fragaria vesca subsp. vesca]
Length = 689
Score = 536 bits (1380), Expect = e-150
Identities = 270/374 (72%), Positives = 295/374 (78%), Gaps = 3/374 (0%)
Frame = -1
Query: 1144 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 965
R+SFRQTVCRHWLRSLCMKG+ACGFLHQYDKSRMPVCRFFR+YGECREQDCVYKHTNEDI
Sbjct: 63 RKSFRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPVCRFFRMYGECREQDCVYKHTNEDI 122
Query: 964 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 785
KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEE+LQKIQ L SYN+
Sbjct: 123 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQHLNSYNYNNSNKFSQPRNGGF 182
Query: 784 XQT-EKPQFPQGPNGTNQVG-KTSMTESGNVLXXXXXXXXXXXXXXXXXQ-IPNLLNSQQ 614
Q ++ Q Q N NQV + S ES NV Q +PN L SQ
Sbjct: 183 PQQHDRSQPAQVTNSFNQVVVRPSAAESANVQQPQQFQQTQQPVAQTQAQSVPNGLASQA 242
Query: 613 NQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILI 434
N+A A PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNE+KLNEAF+S +NVILI
Sbjct: 243 NRA---ALPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSAENVILI 299
Query: 433 FSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLR 254
FSVN+TRHFQGCAKM SRIGG V GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLR
Sbjct: 300 FSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR 359
Query: 253 NPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLE 74
NP+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+S+ KGV+ E
Sbjct: 360 NPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISIAAESKREEEKAKGVNPE 419
Query: 73 NASENPDIVPFEDN 32
N ENPDIVPFEDN
Sbjct: 420 NGGENPDIVPFEDN 433
>ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum tuberosum]
Length = 677
Score = 534 bits (1375), Expect = e-149
Identities = 268/373 (71%), Positives = 290/373 (77%), Gaps = 2/373 (0%)
Frame = -1
Query: 1144 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 965
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 67 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 126
Query: 964 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 785
KECNMYKLGFCPNGPDCRYRHAKLPGPPPPV E+LQ+IQ LTSY +
Sbjct: 127 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVVEVLQRIQNLTSYGYSNRFFQNRNTNYST 186
Query: 784 XQTEKPQFPQGPNGTNQVGKTSMTES--GNVLXXXXXXXXXXXXXXXXXQIPNLLNSQQN 611
+K Q PQ PN NQ K++ E G Q L +SQQN
Sbjct: 187 Q-ADKSQIPQVPNVMNQAVKSTAAEPPIGQPHQPHQQQVQQPQHQGAPTQTQTLPSSQQN 245
Query: 610 QASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIF 431
QA A PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+SV+NVIL+F
Sbjct: 246 QA---AIPLPQGPSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSVENVILVF 302
Query: 430 SVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRN 251
S+N+TRHFQG AKMTSRIGG GGNWKH +GTAHYGRNF++KWLKL ELSF KTRHLRN
Sbjct: 303 SINRTRHFQGLAKMTSRIGGAAKGGNWKHEHGTAHYGRNFSLKWLKLCELSFQKTRHLRN 362
Query: 250 PFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLEN 71
P+NENLPVKISRDCQELE SVGEQLASLLY+EPDS+LMAVSL KGV+ +N
Sbjct: 363 PYNENLPVKISRDCQELEISVGEQLASLLYVEPDSELMAVSLAAESKREEERAKGVNPDN 422
Query: 70 ASENPDIVPFEDN 32
+ENPDIVPFEDN
Sbjct: 423 GNENPDIVPFEDN 435
>ref|XP_004233145.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum lycopersicum]
Length = 671
Score = 532 bits (1371), Expect = e-149
Identities = 267/373 (71%), Positives = 290/373 (77%), Gaps = 2/373 (0%)
Frame = -1
Query: 1144 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 965
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 61 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 120
Query: 964 KECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXX 785
KECNM+KLGFCPNGPDCRYRHAK+PGPPPPV E+LQKIQ LTS+ +
Sbjct: 121 KECNMFKLGFCPNGPDCRYRHAKMPGPPPPVVEVLQKIQNLTSHGYSNRFFQNRNTNYST 180
Query: 784 XQTEKPQFPQGPNGTNQVGKTSMTES--GNVLXXXXXXXXXXXXXXXXXQIPNLLNSQQN 611
+K Q PQ PN NQ K++ TE G Q L +QQN
Sbjct: 181 Q-ADKSQIPQVPNVMNQAVKSTATEPPIGQPHQPHQQQVQQPQHQGPPTQTQTLPGTQQN 239
Query: 610 QASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIF 431
QA A PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+SV+NVILIF
Sbjct: 240 QA---AIPLPQGPSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSVENVILIF 296
Query: 430 SVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRN 251
S+N+TRHFQG AKMTSRIGG GGNWKH +GTAHYGRNF+VKWLKL ELSF KTRHLRN
Sbjct: 297 SINRTRHFQGLAKMTSRIGGAAKGGNWKHEHGTAHYGRNFSVKWLKLCELSFQKTRHLRN 356
Query: 250 PFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLEN 71
P+NENLPVKISRDCQELE SVGEQLASLLY+EPDS+LMA+SL KGV+ +N
Sbjct: 357 PYNENLPVKISRDCQELEISVGEQLASLLYVEPDSELMAISLAAESKREEERAKGVNPDN 416
Query: 70 ASENPDIVPFEDN 32
+ENPDIVPFEDN
Sbjct: 417 GNENPDIVPFEDN 429
>ref|NP_174334.2| cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis
thaliana] gi|229553918|sp|A9LNK9.1|CPSF_ARATH RecName:
Full=Cleavage and polyadenylation specificity factor
CPSF30; AltName: Full=Zinc finger CCCH domain-containing
protein 11; Short=AtC3H11 gi|160338218|gb|ABX26048.1|
cleavage and polyadenylation specificity factor-YT521B
[Arabidopsis thaliana] gi|332193100|gb|AEE31221.1|
cleavage and polyadenylation specificity factor CPSF30
[Arabidopsis thaliana]
Length = 631
Score = 532 bits (1371), Expect = e-149
Identities = 262/370 (70%), Positives = 291/370 (78%)
Frame = -1
Query: 1141 RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIK 962
RSFRQTVCRHWLR LCMKGDACGFLHQ+DK+RMP+CRFFRLYGECREQDCVYKHTNEDIK
Sbjct: 59 RSFRQTVCRHWLRGLCMKGDACGFLHQFDKARMPICRFFRLYGECREQDCVYKHTNEDIK 118
Query: 961 ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXXXXXXXXXX 782
ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEE+LQKIQQLT+YN+G
Sbjct: 119 ECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTTYNYGTNRLYQARNVA--- 175
Query: 781 QTEKPQFPQGPNGTNQVGKTSMTESGNVLXXXXXXXXXXXXXXXXXQIPNLLNSQQNQAS 602
PQ P G + + ESGN+ IPN +Q +
Sbjct: 176 ----PQLQDRPQGQVPM-QGQPQESGNLQQQQQQQPQQSQHQVSQTLIPN----PADQTN 226
Query: 601 RTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIFSVN 422
RT+ PLPQG +RYFVVKS N EN ELSVQQGVWATQRSNEAKLNEAF+SV+NVILIFSVN
Sbjct: 227 RTSHPLPQGVNRYFVVKSNNRENFELSVQQGVWATQRSNEAKLNEAFDSVENVILIFSVN 286
Query: 421 KTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRNPFN 242
+TRHFQGCAKMTSRIGG++GGGNWKH +GTA YGRNF+VKWLKL ELSF+KTR+LRNP+N
Sbjct: 287 RTRHFQGCAKMTSRIGGYIGGGNWKHEHGTAQYGRNFSVKWLKLCELSFHKTRNLRNPYN 346
Query: 241 ENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXKGVSLENASE 62
ENLPVKISRDCQELEPSVGEQLASLLYLEPDS+LMA+S+ KGV+ E+ +E
Sbjct: 347 ENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISIAAEAKREEEKAKGVNPESRAE 406
Query: 61 NPDIVPFEDN 32
NPDIVPFEDN
Sbjct: 407 NPDIVPFEDN 416