BLASTX nr result
ID: Rehmannia22_contig00004969
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00004969
(1072 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 305 2e-80
emb|CBI33876.3| unnamed protein product [Vitis vinifera] 304 5e-80
ref|XP_004245902.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 284 5e-74
ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 282 1e-73
ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 282 1e-73
ref|XP_006352864.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 276 8e-72
gb|EOY23975.1| RNA-binding family protein isoform 1 [Theobroma c... 276 1e-71
ref|XP_006428430.1| hypothetical protein CICLE_v10012439mg [Citr... 268 4e-69
gb|EMJ10617.1| hypothetical protein PRUPE_ppa009362mg [Prunus pe... 267 5e-69
ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ri... 265 2e-68
ref|XP_002326529.1| predicted protein [Populus trichocarpa] gi|5... 265 2e-68
gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides] 265 2e-68
gb|EXB32996.1| 31 kDa ribonucleoprotein [Morus notabilis] 259 1e-66
ref|XP_004301780.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 254 5e-65
ref|XP_006294626.1| hypothetical protein CARUB_v10023663mg [Caps... 251 3e-64
ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arab... 251 5e-64
gb|EOY23976.1| RNA-binding family protein isoform 2 [Theobroma c... 249 1e-63
gb|AFK48727.1| unknown [Lotus japonicus] 247 5e-63
ref|XP_006410699.1| hypothetical protein EUTSA_v10016986mg [Eutr... 246 9e-63
ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein... 246 1e-62
>ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis vinifera]
Length = 288
Score = 305 bits (782), Expect = 2e-80
Identities = 159/244 (65%), Positives = 185/244 (75%), Gaps = 3/244 (1%)
Frame = -2
Query: 1044 SIRFHISLSAPAVSLKFALYNLPLLSPSQAQPTKKPGFQLLSAXXXXXXXXXXEKSEKQD 865
S+ H S P++ LK+ LY LPLL PT K F+L S+ E++++ +
Sbjct: 30 SMSLHSSAFIPSICLKYPLYPLPLL---YTNPTTKFSFELCSSVQEIEVEAKPEQTQEPN 86
Query: 864 NRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMASGEEAQAAI 685
+RKLFVLNLPWS SV DIK +FGECG V DVEIIK KDG++RG+AFVTM SGEEAQA +
Sbjct: 87 QKRKLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVV 146
Query: 684 EKYDSYELVGRIIRVQFAKRFKKPIRTVT---VNPPPGETRYKLYVSNLAWKVRSNNLRE 514
EK+DSYEL GRIIRV+FAKRFKKP PP GETR+KLYVSNLAWKVRS +LRE
Sbjct: 147 EKFDSYELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVRSTHLRE 206
Query: 513 FFSSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLGRPIRLKFSEK 334
FFSSNFNPVSVRVVFD+PSGRS GYGF SFATKEEAE+AIS LDGKEL+GRP+ LKFS K
Sbjct: 207 FFSSNFNPVSVRVVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELMGRPVHLKFSVK 266
Query: 333 NTDD 322
D+
Sbjct: 267 TIDE 270
>emb|CBI33876.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 304 bits (778), Expect = 5e-80
Identities = 158/240 (65%), Positives = 183/240 (76%), Gaps = 3/240 (1%)
Frame = -2
Query: 1032 HISLSAPAVSLKFALYNLPLLSPSQAQPTKKPGFQLLSAXXXXXXXXXXEKSEKQDNRRK 853
H S P++ LK+ LY LPLL PT K F+L S+ E++++ + +RK
Sbjct: 4 HSSAFIPSICLKYPLYPLPLL---YTNPTTKFSFELCSSVQEIEVEAKPEQTQEPNQKRK 60
Query: 852 LFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMASGEEAQAAIEKYD 673
LFVLNLPWS SV DIK +FGECG V DVEIIK KDG++RG+AFVTM SGEEAQA +EK+D
Sbjct: 61 LFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKFD 120
Query: 672 SYELVGRIIRVQFAKRFKKPIRTVT---VNPPPGETRYKLYVSNLAWKVRSNNLREFFSS 502
SYEL GRIIRV+FAKRFKKP PP GETR+KLYVSNLAWKVRS +LREFFSS
Sbjct: 121 SYELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSS 180
Query: 501 NFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLGRPIRLKFSEKNTDD 322
NFNPVSVRVVFD+PSGRS GYGF SFATKEEAE+AIS LDGKEL+GRP+ LKFS K D+
Sbjct: 181 NFNPVSVRVVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELMGRPVHLKFSVKTIDE 240
>ref|XP_004245902.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Solanum
lycopersicum]
Length = 285
Score = 284 bits (726), Expect = 5e-74
Identities = 156/250 (62%), Positives = 186/250 (74%), Gaps = 1/250 (0%)
Frame = -2
Query: 1071 FHSFNKSLSSIRFHISLSAPAVSLKFALYNLPLLSPSQAQPTKKPGFQLLSAXXXXXXXX 892
F F S+ ++ SL+ +SLK LY LPL PS+ Q T+ +
Sbjct: 24 FPLFPNSIKLQNYNHSLN---LSLKSILYPLPL--PSRKQCTQLHCSAVEVTEPVTVQEE 78
Query: 891 XXEKSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMA 712
EK +K + RRKLFVLNLPWS +VADIK +F ECG V+DVEIIK KDGK+RGFAFVTM+
Sbjct: 79 KTEKPQKNNQRRKLFVLNLPWSLTVADIKNIFAECGIVDDVEIIKTKDGKSRGFAFVTMS 138
Query: 711 SGEEAQAAIEKYDSYELVGRIIRVQFAKRFKKPIRTVTVN-PPPGETRYKLYVSNLAWKV 535
SGEEAQAAI+K DSYE+ GRIIRV+FAKRFKKP + PP GE R+KLYVSNLAWKV
Sbjct: 139 SGEEAQAAIDKLDSYEVSGRIIRVEFAKRFKKPPGAPPPSTPPQGEARHKLYVSNLAWKV 198
Query: 534 RSNNLREFFSSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLGRPI 355
RS LREFFS+N NP+S RVVFDN SGR+AGYGFV+F TKE+AE+A+S LDGKEL+GRPI
Sbjct: 199 RSTQLREFFSANNNPISARVVFDNASGRAAGYGFVTFDTKEQAEAALSALDGKELMGRPI 258
Query: 354 RLKFSEKNTD 325
RLKFSE++ D
Sbjct: 259 RLKFSERDAD 268
>ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 288
Score = 282 bits (722), Expect = 1e-73
Identities = 144/249 (57%), Positives = 187/249 (75%), Gaps = 2/249 (0%)
Frame = -2
Query: 1062 FNKSLSSIRFHISLSAPAVSLKFALYNLPLLSPSQAQPTKKPG--FQLLSAXXXXXXXXX 889
FNK S I+ IS S+P +SL +SP+ ++ G +L SA
Sbjct: 28 FNKLPSPIKLRISFSSPLLSLN----PTTPISPTSFNSSRNRGGGARLCSALQEVTLEEA 83
Query: 888 XEKSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMAS 709
E+++ + +RKL++ NLPWS SV DIK++FG+CG V DVEIIK K+G++RGFAFVTMAS
Sbjct: 84 SEENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQKNGRSRGFAFVTMAS 143
Query: 708 GEEAQAAIEKYDSYELVGRIIRVQFAKRFKKPIRTVTVNPPPGETRYKLYVSNLAWKVRS 529
+EAQAAI+K+DS E+ GR+I+V+FAKR KKP PPPGET KLYVSNLAWKVRS
Sbjct: 144 PDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWKVRS 203
Query: 528 NNLREFFSSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLGRPIRL 349
NNLR+FFS NFNP++ RVVFD+P+GRSAGYGFVSFAT+EEA++A+S L+GKEL+GRP+RL
Sbjct: 204 NNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRL 263
Query: 348 KFSEKNTDD 322
KFSE+N ++
Sbjct: 264 KFSERNVNE 272
>ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
sativus]
Length = 282
Score = 282 bits (722), Expect = 1e-73
Identities = 144/249 (57%), Positives = 187/249 (75%), Gaps = 2/249 (0%)
Frame = -2
Query: 1062 FNKSLSSIRFHISLSAPAVSLKFALYNLPLLSPSQAQPTKKPG--FQLLSAXXXXXXXXX 889
FNK S I+ IS S+P +SL +SP+ ++ G +L SA
Sbjct: 22 FNKLPSPIKLRISFSSPLLSLN----PTTPISPTSFNSSRNRGGGARLCSALQEVTLEEA 77
Query: 888 XEKSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMAS 709
E+++ + +RKL++ NLPWS SV DIK++FG+CG V DVEIIK K+G++RGFAFVTMAS
Sbjct: 78 SEENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQKNGRSRGFAFVTMAS 137
Query: 708 GEEAQAAIEKYDSYELVGRIIRVQFAKRFKKPIRTVTVNPPPGETRYKLYVSNLAWKVRS 529
+EAQAAI+K+DS E+ GR+I+V+FAKR KKP PPPGET KLYVSNLAWKVRS
Sbjct: 138 PDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWKVRS 197
Query: 528 NNLREFFSSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLGRPIRL 349
NNLR+FFS NFNP++ RVVFD+P+GRSAGYGFVSFAT+EEA++A+S L+GKEL+GRP+RL
Sbjct: 198 NNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRL 257
Query: 348 KFSEKNTDD 322
KFSE+N ++
Sbjct: 258 KFSERNVNE 266
>ref|XP_006352864.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Solanum
tuberosum]
Length = 284
Score = 276 bits (707), Expect = 8e-72
Identities = 136/187 (72%), Positives = 161/187 (86%), Gaps = 1/187 (0%)
Frame = -2
Query: 882 KSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMASGE 703
K +K + RRKLFVLNLPWS +V DIK +F ECG V+DVEIIK +DGK+RGFAFVTM+SGE
Sbjct: 81 KPQKNNLRRKLFVLNLPWSLTVPDIKNIFAECGIVDDVEIIKTEDGKSRGFAFVTMSSGE 140
Query: 702 EAQAAIEKYDSYELVGRIIRVQFAKRFKKPIRTVTVNPPP-GETRYKLYVSNLAWKVRSN 526
EAQAAI+K DSYE++GRIIRV+FAKRFKKP + PP GE R+KLYVSNLAWKVRS
Sbjct: 141 EAQAAIDKLDSYEVLGRIIRVEFAKRFKKPPGAPPPSTPPQGEARHKLYVSNLAWKVRST 200
Query: 525 NLREFFSSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLGRPIRLK 346
LREFFS+N+NP+S RV+FDN SGR+AGYGFVSF TKE+AE+A+S LDGKEL+GRPIRLK
Sbjct: 201 QLREFFSANYNPISARVIFDNASGRAAGYGFVSFDTKEQAEAAVSALDGKELMGRPIRLK 260
Query: 345 FSEKNTD 325
FSE++ D
Sbjct: 261 FSERDAD 267
Score = 57.8 bits (138), Expect = 7e-06
Identities = 30/89 (33%), Positives = 52/89 (58%)
Frame = -2
Query: 600 TVNPPPGETRYKLYVSNLAWKVRSNNLREFFSSNFNPVSVRVVFDNPSGRSAGYGFVSFA 421
T P R KL+V NL W + +++ F+ V ++ G+S G+ FV+ +
Sbjct: 79 TEKPQKNNLRRKLFVLNLPWSLTVPDIKNIFAECGIVDDVEII-KTEDGKSRGFAFVTMS 137
Query: 420 TKEEAESAISELDGKELLGRPIRLKFSEK 334
+ EEA++AI +LD E+LGR IR++F+++
Sbjct: 138 SGEEAQAAIDKLDSYEVLGRIIRVEFAKR 166
>gb|EOY23975.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 281
Score = 276 bits (705), Expect = 1e-71
Identities = 147/243 (60%), Positives = 182/243 (74%)
Frame = -2
Query: 1050 LSSIRFHISLSAPAVSLKFALYNLPLLSPSQAQPTKKPGFQLLSAXXXXXXXXXXEKSEK 871
LS + IS SA +S F + +L KKPGF L S EK++K
Sbjct: 31 LSCLISGISKSASILSHSFFISSL-------TNSRKKPGFLLCSTVQEVNVEAETEKTQK 83
Query: 870 QDNRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMASGEEAQA 691
+ +RKLFVLNLPWS++VADIK +FG+CG V DVEIIK KDG++R FAFVTMASGEEAQA
Sbjct: 84 SNVKRKLFVLNLPWSYTVADIKDLFGQCGNVTDVEIIKQKDGRSRNFAFVTMASGEEAQA 143
Query: 690 AIEKYDSYELVGRIIRVQFAKRFKKPIRTVTVNPPPGETRYKLYVSNLAWKVRSNNLREF 511
A++K DS+E+ RIIRV+FA+RFKKP + PP ET +KLYVSNLAWKVRS++LREF
Sbjct: 144 AVDKLDSHEVSARIIRVEFARRFKKPSPSPQPIVPPRETHHKLYVSNLAWKVRSSHLREF 203
Query: 510 FSSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLGRPIRLKFSEKN 331
FS+ FNPV+ RV+F PSG+SAGYGFVSFATKEEA++AIS L+GKEL+ RP+RLKFSE+N
Sbjct: 204 FSA-FNPVAARVIFGTPSGQSAGYGFVSFATKEEADAAISTLNGKELMDRPLRLKFSERN 262
Query: 330 TDD 322
D+
Sbjct: 263 VDE 265
>ref|XP_006428430.1| hypothetical protein CICLE_v10012439mg [Citrus clementina]
gi|567871683|ref|XP_006428431.1| hypothetical protein
CICLE_v10012439mg [Citrus clementina]
gi|567871685|ref|XP_006428432.1| hypothetical protein
CICLE_v10012439mg [Citrus clementina]
gi|568877400|ref|XP_006491727.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like isoform
X1 [Citrus sinensis] gi|568877402|ref|XP_006491728.1|
PREDICTED: ribonucleoprotein At2g37220,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|568877404|ref|XP_006491729.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like isoform
X3 [Citrus sinensis] gi|557530487|gb|ESR41670.1|
hypothetical protein CICLE_v10012439mg [Citrus
clementina] gi|557530488|gb|ESR41671.1| hypothetical
protein CICLE_v10012439mg [Citrus clementina]
gi|557530489|gb|ESR41672.1| hypothetical protein
CICLE_v10012439mg [Citrus clementina]
Length = 275
Score = 268 bits (684), Expect = 4e-69
Identities = 134/209 (64%), Positives = 165/209 (78%)
Frame = -2
Query: 951 PTKKPGFQLLSAXXXXXXXXXXEKSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGGVED 772
PT+ Q+ S E+++KQ+ RRK++V NLPWSFSVA+IK +F CG V D
Sbjct: 48 PTRNVCLQVCSTLQDTTVQTKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPCGTVVD 107
Query: 771 VEIIKHKDGKNRGFAFVTMASGEEAQAAIEKYDSYELVGRIIRVQFAKRFKKPIRTVTVN 592
VEIIKHK GKNR FAFVTMAS EEAQAA+ ++D+ E+ GRIIRV+FAK+FKKP + +
Sbjct: 108 VEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRPQRSAS 167
Query: 591 PPPGETRYKLYVSNLAWKVRSNNLREFFSSNFNPVSVRVVFDNPSGRSAGYGFVSFATKE 412
P ET++KLYVSNL+WKVRS +LREFFS+NFNPVS +VVF++ GRSAGYGFVSFATKE
Sbjct: 168 APARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKE 227
Query: 411 EAESAISELDGKELLGRPIRLKFSEKNTD 325
EAE+AIS LDGKEL+GRP+RLKF +KN D
Sbjct: 228 EAEAAISSLDGKELMGRPLRLKFGQKNDD 256
>gb|EMJ10617.1| hypothetical protein PRUPE_ppa009362mg [Prunus persica]
Length = 295
Score = 267 bits (683), Expect = 5e-69
Identities = 146/254 (57%), Positives = 180/254 (70%), Gaps = 7/254 (2%)
Frame = -2
Query: 1071 FHSFNKSLSSIRFHISLSAPAVSLKFALYNLPLLSPSQAQPTKKPGFQLLSAXXXXXXXX 892
F + K +S++ HIS S P +S F + P + + PT+KP F+L+ +
Sbjct: 25 FFASPKPSTSLKLHISNSIPPISRNFLYSSPPCILNN---PTRKPFFELMCSAVQEVTAE 81
Query: 891 XXEKSEK------QDNRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGF 730
EK Q+ +RKL+V+NLPWS +V DIK +FGECG V DVEIIK +GK+RGF
Sbjct: 82 EEAVEEKAEETQTQNLKRKLYVVNLPWSLTVVDIKNLFGECGTVTDVEIIKQPNGKSRGF 141
Query: 729 AFVTMASGEEAQAAIEKYDSYELVGRIIRVQFAKRFKKPIRTVTVNPPPGETRYKLYVSN 550
AFVTMASGEEAQA IEK+ S+E++ R IRV+FAK+FKKP NP ETRYKLYVSN
Sbjct: 142 AFVTMASGEEAQAVIEKFHSHEVLDRTIRVEFAKQFKKP-SPPPPNPQIVETRYKLYVSN 200
Query: 549 LAWKVRSNNLREFFSSNFN-PVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKE 373
L WKVRS++LR+F S NF PVS RVVF PSG+S GYGF+SFATKEEAESAIS L+GKE
Sbjct: 201 LGWKVRSSHLRDFVSENFKVPVSARVVFSGPSGKSGGYGFLSFATKEEAESAISSLNGKE 260
Query: 372 LLGRPIRLKFSEKN 331
L+GRP+ LKFSEKN
Sbjct: 261 LMGRPLNLKFSEKN 274
>ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532973|gb|EEF34739.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 278
Score = 265 bits (677), Expect = 2e-68
Identities = 138/235 (58%), Positives = 175/235 (74%)
Frame = -2
Query: 1026 SLSAPAVSLKFALYNLPLLSPSQAQPTKKPGFQLLSAXXXXXXXXXXEKSEKQDNRRKLF 847
S S P +S F+L N+ L + +K F+ S ++++ +RKL+
Sbjct: 37 SNSIPLLSHNFSLSNIHLTA-------RKLSFERFSTAQEIMIPE---ETQETTQKRKLY 86
Query: 846 VLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMASGEEAQAAIEKYDSY 667
V NLPWS SV DIK +FG+CG V DVEIIK K+G++RGFAFVT+ASGEEAQAAI+K DS+
Sbjct: 87 VFNLPWSLSVVDIKNLFGQCGTVTDVEIIKQKNGRSRGFAFVTLASGEEAQAAIDKLDSH 146
Query: 666 ELVGRIIRVQFAKRFKKPIRTVTVNPPPGETRYKLYVSNLAWKVRSNNLREFFSSNFNPV 487
E+ GRIIRV+FAKR K P ETR+K+YVSNLAWKVRS +LREFFS+NF+PV
Sbjct: 147 EVSGRIIRVEFAKRLKPPSPPSPTGTSARETRHKIYVSNLAWKVRSTHLREFFSTNFSPV 206
Query: 486 SVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLGRPIRLKFSEKNTDD 322
S RVVFD+P+GRS+GYGFVSFAT+EEAE+AIS LDGKEL+GRP+RLKFS++ TD+
Sbjct: 207 SSRVVFDSPTGRSSGYGFVSFATREEAEAAISALDGKELMGRPLRLKFSDRKTDE 261
>ref|XP_002326529.1| predicted protein [Populus trichocarpa]
gi|566146773|ref|XP_006368391.1| 33 kDa ribonucleoprotein
[Populus trichocarpa] gi|550346304|gb|ERP64960.1| 33 kDa
ribonucleoprotein [Populus trichocarpa]
Length = 294
Score = 265 bits (677), Expect = 2e-68
Identities = 145/254 (57%), Positives = 182/254 (71%), Gaps = 15/254 (5%)
Frame = -2
Query: 1038 RFHISLSAPAVSLKFALYN-LPLLSPSQAQPT--------KKPGFQLLSAXXXXXXXXXX 886
RF +S +P +SL + N PL+S + QP+ K FQL S
Sbjct: 23 RFFLSPKSPPLSLNLHISNPTPLISHNFPQPSLTQNHPRSKSLCFQLCSTVQEVTVEITP 82
Query: 885 EKSEKQDN--RRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMA 712
E+ E Q+ +RKLFV+NLPWSFSV DIK +FG+CG V DVEIIK K+G++RGFAFVTM
Sbjct: 83 EEEEIQEANLKRKLFVVNLPWSFSVVDIKDLFGQCGTVSDVEIIKQKNGRSRGFAFVTMT 142
Query: 711 SGEEAQAAIEKYDSYELVGRIIRVQFAKRFKKP----IRTVTVNPPPGETRYKLYVSNLA 544
+GEEAQAAI+K++S E+ GRIIRV+FAKR ++P + + P GETR+KLY+SNLA
Sbjct: 143 TGEEAQAAIDKFNSLEVSGRIIRVEFAKRLRRPPSPRLPGTPADIPAGETRHKLYISNLA 202
Query: 543 WKVRSNNLREFFSSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLG 364
WKVR ++LREFFS+N NPVS RVVFD P+GRS+GYGFVSFAT+EEA +AIS GKEL+G
Sbjct: 203 WKVRGSHLREFFSTNCNPVSSRVVFDGPAGRSSGYGFVSFATREEAVAAISAFSGKELMG 262
Query: 363 RPIRLKFSEKNTDD 322
RPIRLKFSE D+
Sbjct: 263 RPIRLKFSEDKADE 276
>gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 294
Score = 265 bits (677), Expect = 2e-68
Identities = 145/254 (57%), Positives = 182/254 (71%), Gaps = 15/254 (5%)
Frame = -2
Query: 1038 RFHISLSAPAVSLKFALYN-LPLLSPSQAQPT--------KKPGFQLLSAXXXXXXXXXX 886
RF +S +P +SL + N PL+S + QP+ K FQL S
Sbjct: 23 RFFLSPKSPPLSLNLHISNPTPLISHNFPQPSLTQNHPRSKSLCFQLCSTVQEVTMEITP 82
Query: 885 EKSEKQDN--RRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMA 712
E+ E Q+ +RKLFV+NLPWSFSV DIK +FG+CG V DVEIIK K+G++RGFAFVTM
Sbjct: 83 EEEEIQEANLKRKLFVVNLPWSFSVVDIKDLFGQCGTVSDVEIIKQKNGRSRGFAFVTMT 142
Query: 711 SGEEAQAAIEKYDSYELVGRIIRVQFAKRFKKP----IRTVTVNPPPGETRYKLYVSNLA 544
+GEEAQAAI+K++S E+ GRIIRV+FAKR ++P + + P GETR+KLY+SNLA
Sbjct: 143 TGEEAQAAIDKFNSLEVSGRIIRVEFAKRLRRPPSPRLPGTPADIPAGETRHKLYISNLA 202
Query: 543 WKVRSNNLREFFSSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLG 364
WKVR ++LREFFS+N NPVS RVVFD P+GRS+GYGFVSFAT+EEA +AIS GKEL+G
Sbjct: 203 WKVRGSHLREFFSTNCNPVSSRVVFDGPAGRSSGYGFVSFATREEAVAAISAFSGKELMG 262
Query: 363 RPIRLKFSEKNTDD 322
RPIRLKFSE D+
Sbjct: 263 RPIRLKFSEDKADE 276
>gb|EXB32996.1| 31 kDa ribonucleoprotein [Morus notabilis]
Length = 295
Score = 259 bits (662), Expect = 1e-66
Identities = 125/186 (67%), Positives = 153/186 (82%), Gaps = 1/186 (0%)
Frame = -2
Query: 876 EKQDN-RRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMASGEE 700
EK++N +RKL+V+NLPWS +V DIK +FG+CG V DVEIIK KDG+NRGFAFVTMA GEE
Sbjct: 87 EKENNQKRKLYVVNLPWSLTVVDIKSLFGQCGTVTDVEIIKQKDGRNRGFAFVTMACGEE 146
Query: 699 AQAAIEKYDSYELVGRIIRVQFAKRFKKPIRTVTVNPPPGETRYKLYVSNLAWKVRSNNL 520
AQA I++++ ++ GRII+++ AK+FKKP P PGET +KLYVSN+ WKVRS +L
Sbjct: 147 AQAVIDRFNLQDVSGRIIKIELAKQFKKPSPPRPPGPQPGETTHKLYVSNIEWKVRSTHL 206
Query: 519 REFFSSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLGRPIRLKFS 340
R+F S NF PVS RVVFD P GRSAGYGFVSFAT+EEAE+AIS LDGKEL+GRP+RLKFS
Sbjct: 207 RDFVSENFKPVSARVVFDGPKGRSAGYGFVSFATREEAEAAISSLDGKELMGRPLRLKFS 266
Query: 339 EKNTDD 322
EKN +
Sbjct: 267 EKNAGE 272
>ref|XP_004301780.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 299
Score = 254 bits (648), Expect = 5e-65
Identities = 140/239 (58%), Positives = 171/239 (71%), Gaps = 11/239 (4%)
Frame = -2
Query: 1014 PAVSLKFALYNLPLLSPSQAQPTKKPGFQLLSAXXXXXXXXXXE---------KSEKQDN 862
P +S F L + PL+ P +K F+LL + E K++KQ N
Sbjct: 37 PPISHNFLLSSPPLI------PARKLSFELLCSAVQEITTQEEEQAEQESAEEKTQKQQN 90
Query: 861 -RRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMASGEEAQAAI 685
+RKL+V+NLPWS +VADIK +FG+CG V+DVEIIK DG+NRGFAFVTMASGEEAQA I
Sbjct: 91 LKRKLYVVNLPWSLTVADIKTLFGQCGHVKDVEIIKQMDGRNRGFAFVTMASGEEAQAVI 150
Query: 684 EKYDSYELVGRIIRVQFAKRFKKPIRTVTVNPPPGETRYKLYVSNLAWKVRSNNLREFFS 505
+K+DS EL GR ++V+FAK+FKKP + P ETRYKLYVSNLAWK RS++LR+F S
Sbjct: 151 DKFDSQELSGRTVKVEFAKQFKKPTPRPS-TPKVQETRYKLYVSNLAWKARSSHLRDFVS 209
Query: 504 SNF-NPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLGRPIRLKFSEKN 331
NF PVS RVVFD PSG+S GYGFVSFA EEAE AIS L+G+EL+GRP+ LKFSEKN
Sbjct: 210 LNFKTPVSARVVFDGPSGKSVGYGFVSFARMEEAEEAISALNGQELMGRPVTLKFSEKN 268
>ref|XP_006294626.1| hypothetical protein CARUB_v10023663mg [Capsella rubella]
gi|482563334|gb|EOA27524.1| hypothetical protein
CARUB_v10023663mg [Capsella rubella]
Length = 318
Score = 251 bits (642), Expect = 3e-64
Identities = 124/185 (67%), Positives = 155/185 (83%), Gaps = 4/185 (2%)
Frame = -2
Query: 882 KSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMASGE 703
+++K + +RKLFV NLPWS SV DI +F +CG V +VEII+ KDGKNRGFAFVTMASGE
Sbjct: 86 ETQKSNLKRKLFVFNLPWSMSVHDISDLFRQCGTVNNVEIIRQKDGKNRGFAFVTMASGE 145
Query: 702 EAQAAIEKYDSYELVGRIIRVQFAKRFKKPI---RTVTVNPPPGETRYKLYVSNLAWKVR 532
EAQAA++K+D++E+ GRIIRV FA+RFKKP +PPPG+TR+KLYVSNLAWK R
Sbjct: 146 EAQAAVDKFDAFEVSGRIIRVNFARRFKKPTPKPPNALPSPPPGDTRHKLYVSNLAWKAR 205
Query: 531 SNNLREFF-SSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLGRPI 355
S +LRE F +++FNPVS RVVF +P GRS+GYGFVSFAT+EEAE+AI++LDGKE++GRPI
Sbjct: 206 STHLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATREEAENAITKLDGKEIMGRPI 265
Query: 354 RLKFS 340
LKFS
Sbjct: 266 ILKFS 270
>ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp.
lyrata] gi|297325388|gb|EFH55808.1| hypothetical protein
ARALYDRAFT_482506 [Arabidopsis lyrata subsp. lyrata]
Length = 308
Score = 251 bits (640), Expect = 5e-64
Identities = 125/191 (65%), Positives = 157/191 (82%), Gaps = 4/191 (2%)
Frame = -2
Query: 882 KSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMASGE 703
+++K + +RKLFV NLPWS SV DI ++FG+CG V +VEII+ KDGKNRGFAFVTMASGE
Sbjct: 87 ETQKSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKDGKNRGFAFVTMASGE 146
Query: 702 EAQAAIEKYDSYELVGRIIRVQFAKRFKKPI---RTVTVNPPPGETRYKLYVSNLAWKVR 532
EAQAAI+K+D+ ++ GRII V FA+RFKKP +PPPG+TR+KLYVSNLAWK R
Sbjct: 147 EAQAAIDKFDTSQVSGRIISVNFARRFKKPTPKPPNDLPSPPPGDTRHKLYVSNLAWKAR 206
Query: 531 SNNLREFF-SSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLGRPI 355
S +LRE F +S+FNPVS RVVF +P GRS+GYGFVSFAT+EEAE AI++LDGKE++GRPI
Sbjct: 207 STHLRELFTASDFNPVSARVVFADPEGRSSGYGFVSFATREEAEDAIAKLDGKEIMGRPI 266
Query: 354 RLKFSEKNTDD 322
LKFS ++ +
Sbjct: 267 ILKFSLRSASE 277
>gb|EOY23976.1| RNA-binding family protein isoform 2 [Theobroma cacao]
Length = 248
Score = 249 bits (636), Expect = 1e-63
Identities = 135/225 (60%), Positives = 166/225 (73%)
Frame = -2
Query: 1050 LSSIRFHISLSAPAVSLKFALYNLPLLSPSQAQPTKKPGFQLLSAXXXXXXXXXXEKSEK 871
LS + IS SA +S F + +L KKPGF L S EK++K
Sbjct: 31 LSCLISGISKSASILSHSFFISSL-------TNSRKKPGFLLCSTVQEVNVEAETEKTQK 83
Query: 870 QDNRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMASGEEAQA 691
+ +RKLFVLNLPWS++VADIK +FG+CG V DVEIIK KDG++R FAFVTMASGEEAQA
Sbjct: 84 SNVKRKLFVLNLPWSYTVADIKDLFGQCGNVTDVEIIKQKDGRSRNFAFVTMASGEEAQA 143
Query: 690 AIEKYDSYELVGRIIRVQFAKRFKKPIRTVTVNPPPGETRYKLYVSNLAWKVRSNNLREF 511
A++K DS+E+ RIIRV+FA+RFKKP + PP ET +KLYVSNLAWKVRS++LREF
Sbjct: 144 AVDKLDSHEVSARIIRVEFARRFKKPSPSPQPIVPPRETHHKLYVSNLAWKVRSSHLREF 203
Query: 510 FSSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGK 376
FS+ FNPV+ RV+F PSG+SAGYGFVSFATKEEA++AIS L+GK
Sbjct: 204 FSA-FNPVAARVIFGTPSGQSAGYGFVSFATKEEADAAISTLNGK 247
>gb|AFK48727.1| unknown [Lotus japonicus]
Length = 285
Score = 247 bits (631), Expect = 5e-63
Identities = 132/245 (53%), Positives = 169/245 (68%), Gaps = 5/245 (2%)
Frame = -2
Query: 1041 IRFHISLSAPAVSLKFALYNLPLLSPSQAQPTKKPGFQLLSAXXXXXXXXXXEKSEKQDN 862
++ H SLS +NL L S + + T KP QL SA E+ E+
Sbjct: 30 VKLHASLSHS--------HNL-LFSSNASSKTPKPCTQLCSALQEVAEAATEEEPEQDQQ 80
Query: 861 ----RRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMASGEEAQ 694
++KL+V NLPWS S ADIK +FG+CG V DVEII+ KDG+ +G+AFVTMASGEEAQ
Sbjct: 81 ATYIKKKLYVFNLPWSMSAADIKDLFGQCGTVTDVEIIRGKDGRGKGYAFVTMASGEEAQ 140
Query: 693 AAIEKYDSYELVGRIIRVQFAKRFKKPIRTVTVNPPPGETRYKLYVSNLAWKVRSNNLRE 514
AA++K+D+ EL GRI+RV+ AKRFKKP +PPP E R+ +Y SNLAWKVRS +LRE
Sbjct: 141 AAVDKFDTLELSGRILRVELAKRFKKPSPPGPPSPPPSEARHVIYASNLAWKVRSTHLRE 200
Query: 513 FFSSNFN-PVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLGRPIRLKFSE 337
FF+ NF P+S R+VFD PSG++ GYGF+S+ TKEEAE+AIS LDGKEL+GR + LK SE
Sbjct: 201 FFTENFKAPLSARIVFDTPSGKTTGYGFISYLTKEEAEAAISALDGKELMGRSLFLKISE 260
Query: 336 KNTDD 322
K +
Sbjct: 261 KKVKE 265
>ref|XP_006410699.1| hypothetical protein EUTSA_v10016986mg [Eutrema salsugineum]
gi|557111868|gb|ESQ52152.1| hypothetical protein
EUTSA_v10016986mg [Eutrema salsugineum]
Length = 306
Score = 246 bits (629), Expect = 9e-63
Identities = 126/195 (64%), Positives = 158/195 (81%), Gaps = 8/195 (4%)
Frame = -2
Query: 882 KSEKQDNRRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMASGE 703
+++K + +RKLFV NLPWS SV DI ++FG+CG V +VEIIK KDGKNRGFAFVTMASGE
Sbjct: 81 ETQKSNQKRKLFVFNLPWSMSVNDISELFGQCGMVYNVEIIKQKDGKNRGFAFVTMASGE 140
Query: 702 EAQAAIEKYDSYELVGRIIRVQFAKRFKKPIRTVTVNPP-------PGETRYKLYVSNLA 544
+AQAAI+K D++++ GRIIRV FAKRFKKP T PP PGETR+KLYVSNLA
Sbjct: 141 DAQAAIDKLDTFQVSGRIIRVNFAKRFKKP----TPKPPNALPYASPGETRHKLYVSNLA 196
Query: 543 WKVRSNNLREFF-SSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELL 367
WK RS +LREFF +++FN VS RVVF +P GR++GYGFVSF T+EEAE+AI++L+GKEL+
Sbjct: 197 WKARSTHLREFFTAADFNLVSARVVFADPQGRASGYGFVSFPTREEAEAAIAKLNGKELM 256
Query: 366 GRPIRLKFSEKNTDD 322
GRPI LKFS ++ +
Sbjct: 257 GRPISLKFSLRSAGE 271
>ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana] gi|3608147|gb|AAC36180.1| putative chloroplast
RNA binding protein precursor [Arabidopsis thaliana]
gi|14596023|gb|AAK68739.1| putative chloroplast RNA
binding protein precursor [Arabidopsis thaliana]
gi|23198314|gb|AAN15684.1| putative chloroplast RNA
binding protein precursor [Arabidopsis thaliana]
gi|330254012|gb|AEC09106.1| RNA-binding (RRM/RBD/RNP
motifs) family protein [Arabidopsis thaliana]
Length = 308
Score = 246 bits (628), Expect = 1e-62
Identities = 124/194 (63%), Positives = 158/194 (81%), Gaps = 7/194 (3%)
Frame = -2
Query: 882 KSEKQDN---RRKLFVLNLPWSFSVADIKKVFGECGGVEDVEIIKHKDGKNRGFAFVTMA 712
K+E+ N +RKLFV NLPWS SV DI ++FG+CG V +VEII+ KDGKNRGFAFVTMA
Sbjct: 84 KTEETQNSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKDGKNRGFAFVTMA 143
Query: 711 SGEEAQAAIEKYDSYELVGRIIRVQFAKRFKKPI---RTVTVNPPPGETRYKLYVSNLAW 541
SGEEAQAAI+K+D++++ GRII V FA+RFKKP +P PG+TR+KLYVSNLAW
Sbjct: 144 SGEEAQAAIDKFDTFQVSGRIISVSFARRFKKPTPKSPNDLPSPAPGDTRHKLYVSNLAW 203
Query: 540 KVRSNNLREFF-SSNFNPVSVRVVFDNPSGRSAGYGFVSFATKEEAESAISELDGKELLG 364
K RS +LRE F +++FNPVS RVVF +P GRS+GYGFVSFAT+EEAE+AI++L+GKE++G
Sbjct: 204 KARSTHLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATREEAENAITKLNGKEIMG 263
Query: 363 RPIRLKFSEKNTDD 322
RPI LKFS ++ +
Sbjct: 264 RPITLKFSLRSASE 277