BLASTX nr result
ID: Rehmannia22_contig00004955
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00004955
(1311 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY16927.1| RNA-binding family protein isoform 2, partial [Th... 102 4e-19
gb|EOY16926.1| RNA-binding family protein isoform 1 [Theobroma c... 96 3e-17
ref|XP_002337594.1| predicted protein [Populus trichocarpa] 96 3e-17
ref|XP_003605646.1| RNA-binding protein [Medicago truncatula] gi... 96 3e-17
ref|XP_006478306.1| PREDICTED: RNA-binding protein 24-like isofo... 96 4e-17
ref|XP_006441811.1| hypothetical protein CICLE_v10021520mg [Citr... 96 4e-17
ref|XP_002510776.1| RNA-binding region-containing protein, putat... 94 2e-16
gb|ESW03309.1| hypothetical protein PHAVU_011G003400g [Phaseolus... 92 6e-16
ref|XP_006352100.1| PREDICTED: RNA-binding protein 24-A-like iso... 90 2e-15
ref|XP_006371379.1| hypothetical protein POPTR_0019s09640g [Popu... 89 4e-15
ref|XP_004506366.1| PREDICTED: RNA-binding protein Musashi homol... 89 4e-15
ref|XP_002266779.1| PREDICTED: RNA-binding protein 38 [Vitis vin... 89 5e-15
emb|CAN73746.1| hypothetical protein VITISV_041364 [Vitis vinifera] 89 5e-15
ref|XP_004250742.1| PREDICTED: uncharacterized protein LOC101249... 87 2e-14
ref|XP_002319865.1| hypothetical protein POPTR_0013s09120g [Popu... 86 3e-14
ref|XP_006478309.1| PREDICTED: RNA-binding protein 24-like isofo... 84 1e-13
ref|XP_006441812.1| hypothetical protein CICLE_v10021520mg [Citr... 84 1e-13
ref|XP_004141612.1| PREDICTED: uncharacterized protein LOC101221... 82 4e-13
ref|XP_006587725.1| PREDICTED: RNA-binding protein 24-like isofo... 80 2e-12
ref|XP_006591951.1| PREDICTED: RNA-binding protein 24-like isofo... 79 3e-12
>gb|EOY16927.1| RNA-binding family protein isoform 2, partial [Theobroma cacao]
Length = 261
Score = 102 bits (254), Expect = 4e-19
Identities = 49/72 (68%), Positives = 56/72 (77%)
Frame = -3
Query: 1264 YYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAPPT 1085
+YPYL F + GTGGATGY++ QGYGV YPHH FQYSA+NSTG YP HYG P+SLA PT
Sbjct: 194 FYPYLQFGE--GTGGATGYTSGQGYGVQYPHHPFQYSAVNSTGS-YPQHYGAPMSLA-PT 249
Query: 1084 PLQSAGVTMTLH 1049
P +GVTM LH
Sbjct: 250 PALQSGVTMALH 261
>gb|EOY16926.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 344
Score = 96.3 bits (238), Expect = 3e-17
Identities = 67/161 (41%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Frame = -3
Query: 1264 YYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAPPT 1085
+YPYL F + GTGGATGY++ QGYGV YPHH FQYSA+NSTG YP HYG P+SLAP
Sbjct: 194 FYPYLQFGE--GTGGATGYTSGQGYGVQYPHHPFQYSAVNSTGS-YPQHYGAPMSLAPTP 250
Query: 1084 PLQSAGVTMTLHATIPHR*ETHMPMIKRDSFFHFIEVPLA*PWLSFYSPLSLSRPMPV-- 911
LQS + + S F V + PLSLS PV
Sbjct: 251 ALQSVCFAVP-------------QACSKVSTFGLTMV--------LFLPLSLSNSKPVLG 289
Query: 910 --AFGHI-----QTWKSPPKGSPH-----CFSL*ERFLQEN 824
AF + KSPPK H C + FL+EN
Sbjct: 290 IRAFARTNKVPHRGHKSPPKLENHACFFCCIFFKQGFLEEN 330
>ref|XP_002337594.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 96.3 bits (238), Expect = 3e-17
Identities = 52/81 (64%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
Frame = -3
Query: 1264 YYPYLNFNDHQGTGGATGYS--ASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAP 1091
+YPYL F + TGGAT YS + Q YGV YPHHLFQYS+INST G YP HYG P+SLAP
Sbjct: 93 FYPYLQFGEGS-TGGATSYSNTSGQSYGVQYPHHLFQYSSINSTTGGYPQHYGAPMSLAP 151
Query: 1090 PTPLQSAGVTMTLHA-TIPHR 1031
L S GVTM L A IPHR
Sbjct: 152 TAALPS-GVTMALQAPPIPHR 171
>ref|XP_003605646.1| RNA-binding protein [Medicago truncatula] gi|355506701|gb|AES87843.1|
RNA-binding protein [Medicago truncatula]
Length = 272
Score = 95.9 bits (237), Expect = 3e-17
Identities = 49/80 (61%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
Frame = -3
Query: 1264 YYPYLNFNDHQGTGGAT--GYSASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAP 1091
YYPYL + + GTGGAT GY++ QGYGV+YP +FQYS I STGG Y HYGTP+SLAP
Sbjct: 196 YYPYLQYGE--GTGGATTGGYTSGQGYGVNYPPQVFQYSPIASTGG-YAQHYGTPISLAP 252
Query: 1090 PTPLQSAGVTMTLHATIPHR 1031
+GVTM L A IPHR
Sbjct: 253 SPAALPSGVTMALQAPIPHR 272
>ref|XP_006478306.1| PREDICTED: RNA-binding protein 24-like isoform X1 [Citrus sinensis]
gi|568849099|ref|XP_006478307.1| PREDICTED: RNA-binding
protein 24-like isoform X2 [Citrus sinensis]
Length = 286
Score = 95.5 bits (236), Expect = 4e-17
Identities = 49/80 (61%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Frame = -3
Query: 1264 YYPYLNFNDHQGTGGAT-GYSASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAPP 1088
YYPYL F + GTG AT GY++ QGYGV YPHHLF YS IN+ G YP HYG P+S+AP
Sbjct: 210 YYPYLQFGE--GTGAATTGYTSGQGYGVQYPHHLFPYSTINAAAG-YPQHYGPPMSIAPT 266
Query: 1087 TPLQSAGVTMTLHA-TIPHR 1031
LQS M LHA IPHR
Sbjct: 267 PALQSGVTNMALHAPPIPHR 286
>ref|XP_006441811.1| hypothetical protein CICLE_v10021520mg [Citrus clementina]
gi|568849101|ref|XP_006478308.1| PREDICTED: RNA-binding
protein 24-like isoform X3 [Citrus sinensis]
gi|557544073|gb|ESR55051.1| hypothetical protein
CICLE_v10021520mg [Citrus clementina]
Length = 285
Score = 95.5 bits (236), Expect = 4e-17
Identities = 49/80 (61%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Frame = -3
Query: 1264 YYPYLNFNDHQGTGGAT-GYSASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAPP 1088
YYPYL F + GTG AT GY++ QGYGV YPHHLF YS IN+ G YP HYG P+S+AP
Sbjct: 209 YYPYLQFGE--GTGAATTGYTSGQGYGVQYPHHLFPYSTINAAAG-YPQHYGPPMSIAPT 265
Query: 1087 TPLQSAGVTMTLHA-TIPHR 1031
LQS M LHA IPHR
Sbjct: 266 PALQSGVTNMALHAPPIPHR 285
>ref|XP_002510776.1| RNA-binding region-containing protein, putative [Ricinus communis]
gi|223551477|gb|EEF52963.1| RNA-binding region-containing
protein, putative [Ricinus communis]
Length = 259
Score = 93.6 bits (231), Expect = 2e-16
Identities = 46/74 (62%), Positives = 53/74 (71%)
Frame = -3
Query: 1294 SGXXXXXXXAYYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYSAINSTGGIYPPHY 1115
SG A+YPYL F + G+GGAT YS+SQ Y V YPHHLFQYSA+NSTGG YP H+
Sbjct: 181 SGMMSGAAAAFYPYLQFGE--GSGGATSYSSSQNYNVQYPHHLFQYSAVNSTGG-YPQHF 237
Query: 1114 GTPVSLAPPTPLQS 1073
G P+SLAP LQS
Sbjct: 238 GAPLSLAPTASLQS 251
>gb|ESW03309.1| hypothetical protein PHAVU_011G003400g [Phaseolus vulgaris]
Length = 273
Score = 91.7 bits (226), Expect = 6e-16
Identities = 49/81 (60%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Frame = -3
Query: 1264 YYPYLNFNDHQGTGGAT--GYSASQGYGVHYPHHLFQYSAINST-GGIYPPHYGTPVSLA 1094
+YPYL + GG T GYS+ QGYGV+Y HLFQYS I ST G Y HYGTP+SLA
Sbjct: 194 FYPYLQYGGEGSGGGGTSGGYSSGQGYGVNYAPHLFQYSPIASTAAGAYAQHYGTPMSLA 253
Query: 1093 PPTPLQSAGVTMTLHATIPHR 1031
P LQS GVTM+L A IPHR
Sbjct: 254 PSPALQS-GVTMSLQAPIPHR 273
>ref|XP_006352100.1| PREDICTED: RNA-binding protein 24-A-like isoform X1 [Solanum
tuberosum]
Length = 264
Score = 90.1 bits (222), Expect = 2e-15
Identities = 48/92 (52%), Positives = 56/92 (60%)
Frame = -3
Query: 1309 SNGLVSGXXXXXXXAYYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYSAINSTGGI 1130
S SG A+YPY+NF + G G Y+ SQGYGV YPHHLF YSA + G
Sbjct: 176 SAATASGVLSSAAAAFYPYMNFGEGNGNGC---YTPSQGYGVQYPHHLFPYSAAAAGPGY 232
Query: 1129 YPPHYGTPVSLAPPTPLQSAGVTMTLHATIPH 1034
HYGTP+SLA P+P +GVTMTL A IPH
Sbjct: 233 PTQHYGTPISLA-PSPALHSGVTMTLRAPIPH 263
>ref|XP_006371379.1| hypothetical protein POPTR_0019s09640g [Populus trichocarpa]
gi|550317135|gb|ERP49176.1| hypothetical protein
POPTR_0019s09640g [Populus trichocarpa]
Length = 271
Score = 89.0 bits (219), Expect = 4e-15
Identities = 49/80 (61%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Frame = -3
Query: 1264 YYPYLNFNDHQGTGGATGYSAS-QGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAPP 1088
+YPYL F + G G AT Y S Q YGV YP++LFQYSAINST G YP HYG P+SLAP
Sbjct: 194 FYPYLQFGEGSG-GAATSYPTSGQSYGVQYPYNLFQYSAINSTTGGYPQHYGAPMSLAPT 252
Query: 1087 TPLQSAGVTMTLHA-TIPHR 1031
L S GVT+ L A IPHR
Sbjct: 253 AALPS-GVTLALQAPPIPHR 271
>ref|XP_004506366.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like isoform X1
[Cicer arietinum]
Length = 272
Score = 89.0 bits (219), Expect = 4e-15
Identities = 51/95 (53%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
Frame = -3
Query: 1309 SNGLVSGXXXXXXXAYYPYLNFNDHQGTGGAT--GYSASQGYGVHYPHHLFQYSAINSTG 1136
+ G++SG +YPYL + + G+GGAT GY++ QGYGV+Y +FQYS I STG
Sbjct: 183 AGGMMSGAAAAAAA-FYPYLQYGE--GSGGATTGGYTSGQGYGVNYQPQVFQYSPIASTG 239
Query: 1135 GIYPPHYGTPVSLAPPTPLQSAGVTMTLHATIPHR 1031
G Y HYGTP+SLAP LQS GVTM A IPHR
Sbjct: 240 G-YAQHYGTPISLAPSPALQS-GVTMAPQAQIPHR 272
>ref|XP_002266779.1| PREDICTED: RNA-binding protein 38 [Vitis vinifera]
gi|297734754|emb|CBI16988.3| unnamed protein product
[Vitis vinifera]
Length = 264
Score = 88.6 bits (218), Expect = 5e-15
Identities = 44/67 (65%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
Frame = -3
Query: 1264 YYPYLNFNDHQGTGGAT---GYSASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLA 1094
+YPYL F + G+GGA GY++ QGYGV YPHHL QYSAINSTGG YP HYG P+SLA
Sbjct: 193 FYPYLQFGE--GSGGAAASGGYTSGQGYGVQYPHHLVQYSAINSTGG-YPQHYGAPMSLA 249
Query: 1093 PPTPLQS 1073
P LQS
Sbjct: 250 PTPALQS 256
>emb|CAN73746.1| hypothetical protein VITISV_041364 [Vitis vinifera]
Length = 269
Score = 88.6 bits (218), Expect = 5e-15
Identities = 44/67 (65%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
Frame = -3
Query: 1264 YYPYLNFNDHQGTGGAT---GYSASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLA 1094
+YPYL F + G+GGA GY++ QGYGV YPHHL QYSAINSTGG YP HYG P+SLA
Sbjct: 193 FYPYLQFGE--GSGGAAASGGYTSGQGYGVQYPHHLVQYSAINSTGG-YPQHYGAPMSLA 249
Query: 1093 PPTPLQS 1073
P LQS
Sbjct: 250 PTPALQS 256
>ref|XP_004250742.1| PREDICTED: uncharacterized protein LOC101249883 isoform 1 [Solanum
lycopersicum]
Length = 266
Score = 87.0 bits (214), Expect = 2e-14
Identities = 49/94 (52%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Frame = -3
Query: 1309 SNGLVSGXXXXXXXAYYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYSAINSTGGI 1130
S SG A+YPY+NF + G G Y+ SQGYGV YPHHLF YSA + G
Sbjct: 176 SAATASGVLSSAAAAFYPYMNFGEGNGNGC---YTPSQGYGVQYPHHLFPYSAAAAAAGP 232
Query: 1129 -YP-PHYGTPVSLAPPTPLQSAGVTMTLHATIPH 1034
YP HYGTP+SLA P+P +GVTM+L A IPH
Sbjct: 233 GYPTQHYGTPISLA-PSPALHSGVTMSLRAPIPH 265
>ref|XP_002319865.1| hypothetical protein POPTR_0013s09120g [Populus trichocarpa]
gi|222858241|gb|EEE95788.1| hypothetical protein
POPTR_0013s09120g [Populus trichocarpa]
Length = 266
Score = 85.9 bits (211), Expect = 3e-14
Identities = 42/66 (63%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Frame = -3
Query: 1264 YYPYLNFNDHQGTGGATGYS--ASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAP 1091
+YPYL F + TGGAT YS + Q YGV YPHHLFQYS+INST G YP HYG P+SLAP
Sbjct: 194 FYPYLQFGEGS-TGGATSYSNTSGQSYGVQYPHHLFQYSSINSTTGGYPQHYGAPMSLAP 252
Query: 1090 PTPLQS 1073
L S
Sbjct: 253 TAALPS 258
>ref|XP_006478309.1| PREDICTED: RNA-binding protein 24-like isoform X4 [Citrus sinensis]
Length = 279
Score = 84.3 bits (207), Expect = 1e-13
Identities = 41/65 (63%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = -3
Query: 1264 YYPYLNFNDHQGTGGAT-GYSASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAPP 1088
YYPYL F + GTG AT GY++ QGYGV YPHHLF YS IN+ G YP HYG P+S+AP
Sbjct: 210 YYPYLQFGE--GTGAATTGYTSGQGYGVQYPHHLFPYSTINAAAG-YPQHYGPPMSIAPT 266
Query: 1087 TPLQS 1073
LQS
Sbjct: 267 PALQS 271
>ref|XP_006441812.1| hypothetical protein CICLE_v10021520mg [Citrus clementina]
gi|568849105|ref|XP_006478310.1| PREDICTED: RNA-binding
protein 24-like isoform X5 [Citrus sinensis]
gi|557544074|gb|ESR55052.1| hypothetical protein
CICLE_v10021520mg [Citrus clementina]
Length = 278
Score = 84.3 bits (207), Expect = 1e-13
Identities = 41/65 (63%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Frame = -3
Query: 1264 YYPYLNFNDHQGTGGAT-GYSASQGYGVHYPHHLFQYSAINSTGGIYPPHYGTPVSLAPP 1088
YYPYL F + GTG AT GY++ QGYGV YPHHLF YS IN+ G YP HYG P+S+AP
Sbjct: 209 YYPYLQFGE--GTGAATTGYTSGQGYGVQYPHHLFPYSTINAAAG-YPQHYGPPMSIAPT 265
Query: 1087 TPLQS 1073
LQS
Sbjct: 266 PALQS 270
>ref|XP_004141612.1| PREDICTED: uncharacterized protein LOC101221767 [Cucumis sativus]
Length = 274
Score = 82.4 bits (202), Expect = 4e-13
Identities = 45/81 (55%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = -3
Query: 1264 YYPYLNFNDHQGTGGATGYSASQGYGVHYPHHLFQYS-AINSTGG-IYPPHYGT-PVSLA 1094
+YPY F + G GG S QGYGV YPHHLFQYS AINST +P HY P+SL
Sbjct: 198 FYPYFQFGEGSGGGG----SGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLP 253
Query: 1093 PPTPLQSAGVTMTLHATIPHR 1031
P P +GVTM L A IPHR
Sbjct: 254 PTPPTLPSGVTMALPAPIPHR 274
>ref|XP_006587725.1| PREDICTED: RNA-binding protein 24-like isoform X2 [Glycine max]
Length = 272
Score = 79.7 bits (195), Expect = 2e-12
Identities = 44/85 (51%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Frame = -3
Query: 1264 YYPYLNFNDHQGTGGATG-YSASQGYGVHYP--HHLFQYSAINSTGGI---YPPHYGTPV 1103
+YPYL + + G GG +G YS+ QGYGV+YP HLFQYS I ST Y HYGTP
Sbjct: 188 FYPYLQYGEGSGGGGTSGGYSSGQGYGVNYPPQAHLFQYSPIASTAAATAGYAQHYGTPA 247
Query: 1102 SLAPPTPLQSAGVTM-TLHATIPHR 1031
P+P +GVTM L A IPHR
Sbjct: 248 MSLAPSPALQSGVTMPPLQAPIPHR 272
>ref|XP_006591951.1| PREDICTED: RNA-binding protein 24-like isoform X2 [Glycine max]
Length = 272
Score = 79.3 bits (194), Expect = 3e-12
Identities = 46/95 (48%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Frame = -3
Query: 1309 SNGLVSGXXXXXXXAYYPYLNFNDHQGTGGATGYSASQGYGVHYPH--HLFQYSAINSTG 1136
+ G++SG +YPYL + +G+GG G ++ QGYGV+YP HLFQYS I ST
Sbjct: 187 AGGMMSGGAA-----FYPYLQYGG-EGSGG--GGTSGQGYGVNYPPQAHLFQYSPIASTA 238
Query: 1135 GIYPPHYGTPVSLAPPTPLQSAGVTMTLHATIPHR 1031
G Y HYGTP P+P +GVTM L A IPHR
Sbjct: 239 G-YAQHYGTPTMSLAPSPALQSGVTMPLQAPIPHR 272