BLASTX nr result
ID: Rehmannia22_contig00004937
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00004937
(983 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN62460.1| hypothetical protein VITISV_035911 [Vitis vinifera] 56 3e-12
gb|AEL30380.1| hypothetical protein 205D04_20 [Arachis hypogaea] 55 6e-12
gb|AAP53706.1| retrotransposon protein, putative, unclassified [... 50 6e-12
emb|CAE04585.2| OSJNBb0006N15.2 [Oryza sativa Japonica Group] 50 6e-12
gb|AAX96275.1| retrotransposon protein, putative, unclassified [... 48 6e-12
gb|AAX95391.1| Integrase core domain, putative [Oryza sativa Jap... 49 7e-12
gb|ABA98369.1| retrotransposon protein, putative, Ty1-copia subc... 49 1e-11
emb|CAE01974.2| OSJNBb0051N19.3 [Oryza sativa Japonica Group] 50 1e-11
gb|ABA98045.1| retrotransposon protein, putative, unclassified [... 48 2e-11
gb|ABA97696.1| retrotransposon protein, putative, unclassified [... 45 2e-11
emb|CAN64324.1| hypothetical protein VITISV_005640 [Vitis vinifera] 52 2e-11
gb|ABF97694.1| retrotransposon protein, putative, unclassified [... 47 3e-11
gb|ABA93940.1| retrotransposon protein, putative, Ty1-copia subc... 50 3e-11
gb|AAR89047.1| putative integrase [Oryza sativa Japonica Group] 47 3e-11
gb|AAL31657.1|AC079179_12 Putative Zea mays retrotransposon Opie... 49 4e-11
gb|ABA96551.1| retrotransposon protein, putative, Ty1-copia subc... 48 6e-11
gb|AAX96493.1| retrotransposon protein, putative, unclassified [... 45 6e-11
gb|ABA98480.1| retrotransposon protein, putative, Ty1-copia subc... 48 6e-11
gb|ABA98847.1| retrotransposon protein, putative, unclassified [... 46 7e-11
gb|AAX96565.1| retrotransposon protein, putative, Ty1-copia sub-... 48 8e-11
>emb|CAN62460.1| hypothetical protein VITISV_035911 [Vitis vinifera]
Length = 557
Score = 55.8 bits (133), Expect(3) = 3e-12
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +3
Query: 645 KARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFK 764
KARLVAQ Y QE GID++ TFAP+A LEAI +L A +CFK
Sbjct: 161 KARLVAQGYNQEEGIDYEKTFAPVARLEAIRMLRAFACFK 200
Score = 35.4 bits (80), Expect(3) = 3e-12
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
++F LYQMDVKS +LNGFI +E
Sbjct: 200 KDFILYQMDVKSAFLNGFINEE 221
Score = 27.3 bits (59), Expect(3) = 3e-12
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVY-EKQPGFEIF-FGQVIFI--RGLVCLKQAPRVWF 924
F ++ VY E+ PGF+ F F +F + L LKQAP+ W+
Sbjct: 217 FINEEVYVEQPPGFQSFNFPNHVFKLKKTLYGLKQAPKAWY 257
>gb|AEL30380.1| hypothetical protein 205D04_20 [Arachis hypogaea]
Length = 1597
Score = 55.5 bits (132), Expect(3) = 6e-12
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = +3
Query: 627 GTSLMTKARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFKKISSF 779
G + KARLVAQ Y QE GIDFD +FAP+A EAI +LLA++ +K F
Sbjct: 1290 GQVVRNKARLVAQGYDQEEGIDFDESFAPVARREAIRLLLAYAAYKGFKMF 1340
Score = 34.3 bits (77), Expect(3) = 6e-12
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
+ FK++QMDVK +LNGFI +E
Sbjct: 1335 KGFKMFQMDVKCAFLNGFIDRE 1356
Score = 27.7 bits (60), Expect(3) = 6e-12
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVYEKQP-GFE-IFFGQVIF--IRGLVCLKQAPRVWF 924
F + VY QP GFE I F +F + L L+QAPR W+
Sbjct: 1352 FIDREVYVAQPPGFEHIEFPNHVFKLTKALYGLRQAPRAWY 1392
>gb|AAP53706.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1419
Score = 49.7 bits (117), Expect(3) = 6e-12
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +3
Query: 627 GTSLMTKARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFK 764
G + KARLVAQ + Q G+DFD TFAP+A +EAI +LLA + K
Sbjct: 965 GLIVRNKARLVAQGFTQVEGLDFDETFAPVARIEAIRLLLAFAASK 1010
Score = 40.0 bits (92), Expect(3) = 6e-12
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
+ FKLYQMDVKS +LNGFIQ+E
Sbjct: 1010 KGFKLYQMDVKSAFLNGFIQEE 1031
Score = 27.7 bits (60), Expect(3) = 6e-12
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVYEKQP-GFEI--FFGQVIFI-RGLVCLKQAPRVWF 924
F + VY KQP GFE F V + + L LKQAPR W+
Sbjct: 1027 FIQEEVYVKQPPGFENPDFPNHVFKLSKALYGLKQAPRAWY 1067
>emb|CAE04585.2| OSJNBb0006N15.2 [Oryza sativa Japonica Group]
Length = 1134
Score = 49.7 bits (117), Expect(3) = 6e-12
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +3
Query: 627 GTSLMTKARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFK 764
G + KARLVAQ + Q G+DFD TFAP+A +EAI +LLA + K
Sbjct: 739 GLIVRNKARLVAQGFTQVEGLDFDETFAPVARIEAIRLLLAFAASK 784
Score = 40.0 bits (92), Expect(3) = 6e-12
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
+ FKLYQMDVKS +LNGFIQ+E
Sbjct: 784 KGFKLYQMDVKSAFLNGFIQEE 805
Score = 27.7 bits (60), Expect(3) = 6e-12
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVYEKQP-GFEI--FFGQVIFI-RGLVCLKQAPRVWF 924
F + VY KQP GFE F V + + L LKQAPR W+
Sbjct: 801 FIQEEVYVKQPPGFENPDFPNHVFKLSKALYGLKQAPRAWY 841
>gb|AAX96275.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|77550581|gb|ABA93378.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 1115
Score = 48.1 bits (113), Expect(3) = 6e-12
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +3
Query: 627 GTSLMTKARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFK 764
G + KAR VAQ + Q G+DFD TFAP+A +EAI +LLA + K
Sbjct: 803 GLIVRNKARFVAQGFTQVEGLDFDETFAPVARIEAIRLLLAFAASK 848
Score = 40.0 bits (92), Expect(3) = 6e-12
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
+ FKLYQMDVKS +LNGFIQ+E
Sbjct: 848 KGFKLYQMDVKSAFLNGFIQEE 869
Score = 29.3 bits (64), Expect(3) = 6e-12
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVYEKQP-GFEI--FFGQVIFI-RGLVCLKQAPRVWF 924
F + VY KQP GFE F V + +GL +KQAPR W+
Sbjct: 865 FIQEEVYVKQPPGFENPDFPNHVFKLSKGLYGMKQAPRAWY 905
>gb|AAX95391.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|108864296|gb|ABA92891.2| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1584
Score = 49.3 bits (116), Expect(3) = 7e-12
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Frame = +3
Query: 627 GTSLMTKARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHS---CFK 764
G + KARLVAQ + Q G+DFD TFAP+A +EAI + LA + CFK
Sbjct: 1130 GLIVRNKARLVAQGFTQVEGLDFDETFAPVARIEAIRLFLAFAASKCFK 1178
Score = 39.7 bits (91), Expect(3) = 7e-12
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +2
Query: 770 FKLYQMDVKSTYLNGFIQKE 829
FKLYQMDVKS +LNGFIQ+E
Sbjct: 1177 FKLYQMDVKSAFLNGFIQEE 1196
Score = 28.1 bits (61), Expect(3) = 7e-12
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVYEKQP-GFEI--FFGQVIFI-RGLVCLKQAPRVWF 924
F + VY KQP GFE F +V + + L LKQAPR W+
Sbjct: 1192 FIQEEVYVKQPPGFENPDFPNRVFKLSKALYGLKQAPRAWY 1232
>gb|ABA98369.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 904
Score = 48.5 bits (114), Expect(3) = 1e-11
Identities = 25/46 (54%), Positives = 31/46 (67%)
Frame = +3
Query: 627 GTSLMTKARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFK 764
G + KARLVAQ + Q G+DFD TFAPIA +EAI +LL + K
Sbjct: 543 GLVVRNKARLVAQGFTQVEGLDFDETFAPIARIEAIRLLLTFAASK 588
Score = 40.0 bits (92), Expect(3) = 1e-11
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
+ FKLYQMDVKS +LNGFIQ+E
Sbjct: 588 KGFKLYQMDVKSAFLNGFIQEE 609
Score = 28.1 bits (61), Expect(3) = 1e-11
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVYEKQP-GFEI-FFGQVIF--IRGLVCLKQAPRVWF 924
F + VY KQP GFE F IF + L LKQAPR W+
Sbjct: 605 FIQEEVYVKQPPGFENPDFPNHIFKLSKALYGLKQAPRAWY 645
>emb|CAE01974.2| OSJNBb0051N19.3 [Oryza sativa Japonica Group]
Length = 1414
Score = 49.7 bits (117), Expect(3) = 1e-11
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +3
Query: 627 GTSLMTKARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFK 764
G + KARLVAQ + Q G+DFD TFAP+A +EAI +LLA + K
Sbjct: 1008 GLIVRNKARLVAQGFTQVEGLDFDETFAPVARIEAIRLLLAFAASK 1053
Score = 38.9 bits (89), Expect(3) = 1e-11
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
+ FKLYQMDVK+ +LNGFIQ+E
Sbjct: 1053 KGFKLYQMDVKNVFLNGFIQEE 1074
Score = 27.7 bits (60), Expect(3) = 1e-11
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVYEKQP-GFEI--FFGQVIFI-RGLVCLKQAPRVWF 924
F + VY KQP GFE F V + + L LKQAPR W+
Sbjct: 1070 FIQEEVYVKQPPGFENPDFPNHVFKLSKSLYGLKQAPRAWY 1110
>gb|ABA98045.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1452
Score = 48.1 bits (113), Expect(3) = 2e-11
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +3
Query: 627 GTSLMTKARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFK 764
G + KARLVAQ + Q G++FD TFAP+A +EAI +LLA + K
Sbjct: 1125 GLIMRNKARLVAQGFTQVEGLNFDETFAPVARIEAIRLLLAFAASK 1170
Score = 40.0 bits (92), Expect(3) = 2e-11
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
+ FKLYQMDVKS +LNGFIQ+E
Sbjct: 1170 KGFKLYQMDVKSAFLNGFIQEE 1191
Score = 27.7 bits (60), Expect(3) = 2e-11
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVYEKQP-GFEI--FFGQVIFI-RGLVCLKQAPRVWF 924
F + VY KQP GFE F V + + L LKQAPR W+
Sbjct: 1187 FIQEEVYVKQPPGFENPDFPNHVFKLSKALYGLKQAPRAWY 1227
>gb|ABA97696.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1514
Score = 45.4 bits (106), Expect(3) = 2e-11
Identities = 23/46 (50%), Positives = 31/46 (67%)
Frame = +3
Query: 627 GTSLMTKARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFK 764
G + K+RLVAQ Q G+DFD TF+P+A +EAI +LLA + K
Sbjct: 1060 GLIVRNKSRLVAQGSTQVEGLDFDETFSPVARIEAIRLLLAFAASK 1105
Score = 40.0 bits (92), Expect(3) = 2e-11
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
+ FKLYQMDVKS +LNGFIQ+E
Sbjct: 1105 KGFKLYQMDVKSAFLNGFIQEE 1126
Score = 30.0 bits (66), Expect(3) = 2e-11
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVYEKQP-GFEI-FFGQVIF--IRGLVCLKQAPRVWF 924
F + VY KQP GFE +F +F + L LKQAPR W+
Sbjct: 1122 FIQEEVYVKQPPGFENPYFPNHVFKLSKALYGLKQAPRAWY 1162
>emb|CAN64324.1| hypothetical protein VITISV_005640 [Vitis vinifera]
Length = 557
Score = 52.0 bits (123), Expect(3) = 2e-11
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = +3
Query: 645 KARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFK 764
KARLVAQ + QE GID++ TFA +A LEAI +LLA +CFK
Sbjct: 46 KARLVAQGFNQEEGIDYEETFALVARLEAIRMLLALACFK 85
Score = 33.9 bits (76), Expect(3) = 2e-11
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
++F LYQ+DVKS +LNGFI +E
Sbjct: 85 KDFILYQVDVKSAFLNGFINEE 106
Score = 29.6 bits (65), Expect(3) = 2e-11
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +1
Query: 814 FYSKRVY-EKQPGFEIF-FGQVIFI--RGLVCLKQAPRVWF**T*LFLCKMI 957
F ++ VY E+ PGF+ F F +F + L LKQAPR W+ FL K +
Sbjct: 102 FINEEVYVEQPPGFQSFNFPNHVFKLKKALYGLKQAPRAWYERLSKFLLKKV 153
>gb|ABF97694.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1523
Score = 46.6 bits (109), Expect(3) = 3e-11
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +3
Query: 645 KARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFK 764
KARLVAQ + Q G+DFD TFAP+A +EAI + LA + K
Sbjct: 1100 KARLVAQGFTQVEGLDFDETFAPVARIEAIRLFLAFASSK 1139
Score = 40.0 bits (92), Expect(3) = 3e-11
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
+ FKLYQMDVKS +LNGFIQ+E
Sbjct: 1139 KGFKLYQMDVKSAFLNGFIQEE 1160
Score = 28.5 bits (62), Expect(3) = 3e-11
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVYEKQP-GFEI-FFGQVIF--IRGLVCLKQAPRVWF 924
F + VY KQP GFE F +F + L LKQAPR W+
Sbjct: 1156 FIQEEVYVKQPPGFENPDFPNYVFKLSKALYGLKQAPRAWY 1196
>gb|ABA93940.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1508
Score = 49.7 bits (117), Expect(3) = 3e-11
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +3
Query: 627 GTSLMTKARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFK 764
G + KARLVAQ + Q G+DFD TFAP+A +EAI +LLA + K
Sbjct: 1054 GLIVRNKARLVAQGFTQVEGLDFDETFAPVARIEAIRLLLAFAASK 1099
Score = 37.7 bits (86), Expect(3) = 3e-11
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
+ FKLYQMDV S +LNGFIQ+E
Sbjct: 1099 KGFKLYQMDVNSDFLNGFIQEE 1120
Score = 27.7 bits (60), Expect(3) = 3e-11
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVYEKQP-GFEI--FFGQVIFI-RGLVCLKQAPRVWF 924
F + VY KQP GFE F V + + L LKQAPR W+
Sbjct: 1116 FIQEEVYVKQPPGFENPDFPNHVFKLSKALYGLKQAPRAWY 1156
>gb|AAR89047.1| putative integrase [Oryza sativa Japonica Group]
Length = 1507
Score = 46.6 bits (109), Expect(3) = 3e-11
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +3
Query: 645 KARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFK 764
KARLVAQ + Q G+DFD TFAP+A +EAI + LA + K
Sbjct: 1084 KARLVAQGFTQVEGLDFDETFAPVARIEAIRLFLAFASSK 1123
Score = 40.0 bits (92), Expect(3) = 3e-11
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
+ FKLYQMDVKS +LNGFIQ+E
Sbjct: 1123 KGFKLYQMDVKSAFLNGFIQEE 1144
Score = 28.5 bits (62), Expect(3) = 3e-11
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVYEKQP-GFEI-FFGQVIF--IRGLVCLKQAPRVWF 924
F + VY KQP GFE F +F + L LKQAPR W+
Sbjct: 1140 FIQEEVYVKQPPGFENPDFPNYVFKLSKALYGLKQAPRAWY 1180
>gb|AAL31657.1|AC079179_12 Putative Zea mays retrotransposon Opie-2 [Oryza sativa]
gi|20042883|gb|AAM08711.1|AC116601_4 Putative Zea mays
retrotransposon Opie-2 [Oryza sativa Japonica Group]
gi|31429916|gb|AAP51900.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 494
Score = 48.5 bits (114), Expect(3) = 4e-11
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +3
Query: 627 GTSLMTKARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFKKISSF 779
G + KARLVAQ + Q G+DF+ TFAP+A +EAI +LLA + K F
Sbjct: 40 GLIVRNKARLVAQGFTQVEGLDFNETFAPVARIEAIRLLLAFAASKGFKLF 90
Score = 38.5 bits (88), Expect(3) = 4e-11
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
+ FKL+QMDVKS +LNGFIQ+E
Sbjct: 85 KGFKLFQMDVKSAFLNGFIQEE 106
Score = 27.7 bits (60), Expect(3) = 4e-11
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVYEKQP-GFEI--FFGQVIFI-RGLVCLKQAPRVWF 924
F + VY KQP GFE F V + + L LKQAPR W+
Sbjct: 102 FIQEEVYVKQPPGFENPDFPNHVFELSKALYGLKQAPRAWY 142
>gb|ABA96551.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1487
Score = 47.8 bits (112), Expect(3) = 6e-11
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +3
Query: 627 GTSLMTKARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFK 764
G + KARLVAQ + + G+DFD TFAP+A +EAI +LLA + K
Sbjct: 1033 GLIVRNKARLVAQGFTKVEGMDFDETFAPVARIEAIRLLLAFAASK 1078
Score = 38.1 bits (87), Expect(3) = 6e-11
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
+ FKL+QMDVKS +LNGFIQ+E
Sbjct: 1078 KGFKLHQMDVKSAFLNGFIQEE 1099
Score = 28.1 bits (61), Expect(3) = 6e-11
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVYEKQP-GFEIF-FGQVIF--IRGLVCLKQAPRVWF 924
F + VY KQP GFE F +F + L LKQAPR W+
Sbjct: 1095 FIQEEVYVKQPPGFENSDFPNHVFKLSKALYGLKQAPRAWY 1135
>gb|AAX96493.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|77548895|gb|ABA91692.1|
retrotransposon protein, putative, unclassified,
expressed [Oryza sativa Japonica Group]
Length = 1299
Score = 45.4 bits (106), Expect(3) = 6e-11
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +3
Query: 627 GTSLMTKARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFK 764
G + K+R VAQ + Q G+DFD TF P+A +EAI +LLA + K
Sbjct: 931 GLIVRNKSRFVAQGFTQVEGLDFDETFVPVARIEAIRLLLAFAASK 976
Score = 40.0 bits (92), Expect(3) = 6e-11
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
+ FKLYQMDVKS +LNGFIQ+E
Sbjct: 976 KGFKLYQMDVKSAFLNGFIQEE 997
Score = 28.5 bits (62), Expect(3) = 6e-11
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVYEKQP-GFEI--FFGQVIFI-RGLVCLKQAPRVWF 924
F + VY KQP GFE F V + + L LKQAPR W+
Sbjct: 993 FIQEEVYVKQPPGFENPDFSNHVFKLSKALYGLKQAPRAWY 1033
>gb|ABA98480.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 538
Score = 48.1 bits (113), Expect(3) = 6e-11
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +3
Query: 627 GTSLMTKARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFK 764
G + KARLVAQ + Q G+DFD TFAP+A +EAI +LL+ + K
Sbjct: 198 GLIVRNKARLVAQGFTQVEGLDFDETFAPVARVEAIRLLLSFAASK 243
Score = 38.5 bits (88), Expect(3) = 6e-11
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
+ FKLYQMDVKS +LNGFIQ++
Sbjct: 243 KGFKLYQMDVKSAFLNGFIQEK 264
Score = 27.3 bits (59), Expect(3) = 6e-11
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVYEKQP-GFEI--FFGQVIFI-RGLVCLKQAPRVWF 924
F ++VY KQP GFE F V + + L LK+APR W+
Sbjct: 260 FIQEKVYVKQPPGFENPDFPNHVFKLSKALYGLKEAPRAWY 300
>gb|ABA98847.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1417
Score = 45.8 bits (107), Expect(3) = 7e-11
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = +3
Query: 627 GTSLMTKARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFK 764
G + K RLVAQ + Q +DFD TFAP+A +EAI +LLA + K
Sbjct: 963 GLIVRNKTRLVAQGFTQVESLDFDETFAPVARIEAIRLLLAFAASK 1008
Score = 40.0 bits (92), Expect(3) = 7e-11
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
+ FKLYQMDVKS +LNGFIQ+E
Sbjct: 1008 KGFKLYQMDVKSAFLNGFIQEE 1029
Score = 27.7 bits (60), Expect(3) = 7e-11
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVYEKQP-GFEI--FFGQVIFI-RGLVCLKQAPRVWF 924
F + VY KQP GFE F V + + L LKQAPR W+
Sbjct: 1025 FIQEEVYVKQPPGFENPDFPNHVFKLSKALYGLKQAPRAWY 1065
>gb|AAX96565.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77552672|gb|ABA95469.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 709
Score = 47.8 bits (112), Expect(3) = 8e-11
Identities = 25/46 (54%), Positives = 31/46 (67%)
Frame = +3
Query: 627 GTSLMTKARLVAQWYRQEGGIDFDVTFAPIAHLEAICILLAHSCFK 764
G + KARLVAQ + Q G+DFD TFAP+A +EAI LLA + K
Sbjct: 255 GLIVRNKARLVAQGFTQVEGLDFDETFAPVARIEAIRHLLAFAASK 300
Score = 40.0 bits (92), Expect(3) = 8e-11
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2
Query: 764 ENFKLYQMDVKSTYLNGFIQKE 829
+ FKLYQMDVKS +LNGFIQ+E
Sbjct: 300 KGFKLYQMDVKSAFLNGFIQEE 321
Score = 25.8 bits (55), Expect(3) = 8e-11
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +1
Query: 814 FYSKRVYEKQP-GFEI--FFGQVIFI-RGLVCLKQAPRVWF 924
F + VY KQP GFE F V + + LKQAPR W+
Sbjct: 317 FIQEEVYIKQPPGFENPDFPNHVFKLSKAFYGLKQAPRAWY 357