BLASTX nr result

ID: Rehmannia22_contig00004789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00004789
         (507 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301359.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    57   3e-06
gb|EOY12921.1| F-box/RNI/FBD-like domains-containing protein, pu...    56   6e-06

>ref|XP_004301359.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78760-like
           [Fragaria vesca subsp. vesca]
          Length = 447

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 7/169 (4%)
 Frame = +3

Query: 3   FTCKTLVDLRLIDCMSVPSSCTISLPSLKKLQYQID----EALPHFLIGCPVXXXXXXXX 170
           F CKTLV L+L   + + +  +  LP LK L   +     + +   L+GCP         
Sbjct: 138 FMCKTLVVLKLRSIIIINTPTSWCLPCLKVLLISVSFPGHDLMEKLLLGCPALEDLAISG 197

Query: 171 XXXXXXXXXCFNIFSLTLKRLTVNLPFDSVIFCGIGFK---VKINAPALTYLKLQDSVST 341
                     FN+ +L LK+L ++L  ++   C   +    V + AP L Y  L+ +V +
Sbjct: 198 TVGEGYLN--FNVSALELKKLGISLDTENDDRCLADYNDLNVLVRAPKLEYFGLEQNVLS 255

Query: 342 HISAQMLTYLIEADILFNYCRAEGEDDYFKSVVKFIDSLCNVKYLKLSS 488
           +   + L  L+EA I   Y        +       +  +C+VKYL LS+
Sbjct: 256 NCVLKNLKSLVEATIDLTYHVPTEYSGFVGRATALLAQICHVKYLSLSA 304


>gb|EOY12921.1| F-box/RNI/FBD-like domains-containing protein, putative [Theobroma
           cacao]
          Length = 449

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
 Frame = +3

Query: 3   FTCKTLVDLRLIDCMSVPSSCTISLPSLKKL-----QYQIDEALPHFLIGCPVXXXXXXX 167
           FT KTL  L+L   + +    T+SLP LK L     +Y  D ++     GCPV       
Sbjct: 151 FTAKTLHILKLTHGIVLDVPGTVSLPGLKVLHLALIKYASDASVSRLFAGCPVLQELLVQ 210

Query: 168 XXXXXXXXXXCFNIFSLTLKRLTVNLPFDSVIFCGIG-FKVKINAPALTYLKLQDSVSTH 344
                       NI   TLK L+++         G G  K+KINAP L YL LQD++   
Sbjct: 211 KFDGDNAL--ALNISISTLKTLSISFS------TGRGAHKLKINAPILEYLNLQDNLPLE 262

Query: 345 ISAQMLTYLIEADILFNYCRAEGEDDYFKSVVKFIDSLCNVKYLKLSSD 491
              + ++ L+EA++  ++             +  + +L NVK L ++ D
Sbjct: 263 YDIENVSSLVEANVTVSFLE--------NRHIPLVKALSNVKCLSINWD 303


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