BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00004751
         (3529 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]      1558   0.0  
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...  1552   0.0  
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...  1551   0.0  
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...  1533   0.0  
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...  1529   0.0  
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li...  1525   0.0  
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...  1507   0.0  
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...  1499   0.0  
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...  1497   0.0  
gb|EPS70289.1| hypothetical protein M569_04468, partial [Genlise...  1487   0.0  
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...  1483   0.0  
gb|EOY01384.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobro...  1476   0.0  
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu...  1473   0.0  
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]     1461   0.0  
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]     1456   0.0  
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]      1454   0.0  
gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solan...  1432   0.0  
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li...  1410   0.0  
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis...  1402   0.0  
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...  1400   0.0  

>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score = 1558 bits (4034), Expect = 0.0
 Identities = 765/1103 (69%), Positives = 907/1103 (82%), Gaps = 4/1103 (0%)
 Frame = +1

Query: 1    ERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEIIMKLASASARLYFGSF 180
            E VK+FLE  TG GTV ALEVK SK G R +A+VQF N + AE I+ LAS    LY+G  
Sbjct: 17   EAVKKFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEFIIDLASKG--LYYGPS 74

Query: 181  YLRAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMHF 360
            YL+AWE   DI+Q PRT+V  M+ VTLNFGCQ S +KF+VL  ++ VS+KFG G+KK++F
Sbjct: 75   YLKAWEMKTDIVQ-PRTYVEHMDGVTLNFGCQISDKKFAVLG-SKDVSIKFGIGLKKIYF 132

Query: 361  VLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKKLNDSVHSYFRETP 540
             L H S +Y+LQLSYENIWQ+VL+ P+GQ A+ LL+QLFGAPRIYK+L DS +S+F+ETP
Sbjct: 133  FLSHASADYKLQLSYENIWQVVLHRPYGQNAQFLLLQLFGAPRIYKRLEDSCYSFFKETP 192

Query: 541  DDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRLETGVPFAAN- 717
            DDQW+RTTDFTPS IG SS LCL+   G++LPNF +SF +YKES + F L+TG  F+ + 
Sbjct: 193  DDQWVRTTDFTPSWIGLSSSLCLEFRNGVQLPNFSESFFYYKESMNQFILQTGFTFSFSQ 252

Query: 718  -LALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRFDIRYIEHAL 894
             LALVPIVH P G+ELPY+ILFK+  L+Q GC PG  L+ NFF+LVDP+R +I  IEHAL
Sbjct: 253  KLALVPIVHLPEGIELPYKILFKISSLIQHGCFPGLALNFNFFQLVDPRRRNIACIEHAL 312

Query: 895  EKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQITPTRVYFSGP 1074
            EKLYY+KECCYDPV WL EQY++Y   R+ P SP I+LDDGLVYV RV +TP +VYF GP
Sbjct: 313  EKLYYLKECCYDPVRWLTEQYDEYLKGRQLPKSPPITLDDGLVYVRRVVVTPCKVYFCGP 372

Query: 1075 EVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTKLYERILSTL 1254
            EVNVSNRVLR+Y + ++NFLRVSFVDEEW+K++STDL P+ + G+   RT +YERILSTL
Sbjct: 373  EVNVSNRVLRNYSEDINNFLRVSFVDEEWEKIHSTDLLPRASTGN-GTRTDIYERILSTL 431

Query: 1255 KEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDIRNVAKYAARL 1434
            + G IIG+K+F+FLAFSSSQLRDNS+WMFA   GL A+ IR WMGDFR IRNVAKYAARL
Sbjct: 432  RNGFIIGDKRFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFRQIRNVAKYAARL 491

Query: 1435 GQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRVAIKCGFKSAT 1614
            GQSF SS ETLSVG  EVE I D+    +GT Y+FSDGIGKISADFA RV IKCG +  T
Sbjct: 492  GQSFGSSRETLSVGRHEVEVIPDVACSLHGTNYIFSDGIGKISADFAHRVTIKCGLQY-T 550

Query: 1615 PSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQPCFLNRQIIT 1794
            PS+FQIRYGGYKGVVAVDP SS+KLSLR SMLKY+S N KLDVL WSKYQPC+LNRQ++T
Sbjct: 551  PSSFQIRYGGYKGVVAVDPYSSMKLSLRKSMLKYESNNIKLDVLGWSKYQPCYLNRQLVT 610

Query: 1795 LLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKEMLKCGYKPD 1974
            LLSTLGV D V + KQ EAV QLD IL D L+AQEAL+LMSPGEN+NILKEML CGY PD
Sbjct: 611  LLSTLGVIDDVLEQKQNEAVDQLDAILHDSLKAQEALELMSPGENTNILKEMLNCGYMPD 670

Query: 1975 GEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVFVQFSGAGRGG 2154
             EPFLSMMLQTFR+SKLLDLR + RIF+P  R MMGCLDE+  LEYGQVFVQFSGAGR  
Sbjct: 671  AEPFLSMMLQTFRASKLLDLRTRTRIFIPNGRTMMGCLDESRTLEYGQVFVQFSGAGRRQ 730

Query: 2155 FYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHHMVDCVVFPSR 2334
            F+EES+   D+ S +C+++++GNVVVAKNPCLHPGD+RVL+A++V ALHHMVDCVVFP +
Sbjct: 731  FFEESHPFNDSGSANCDFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQK 790

Query: 2335 GMRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDVTIEEVEEYFT 2514
            G RPHPNECSGSDLDGDIYFVCWD DLIPPRQV  MDY+PAPT++LDHDVTIEEVEEYFT
Sbjct: 791  GKRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQSMDYTPAPTTQLDHDVTIEEVEEYFT 850

Query: 2515 NYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVPAEIPPHLRVK 2694
            NYI+NDSLGIIANAH VFAD+E +MA+S+PC +LA+LFSIAVDFPKTGVPAEIP  LR K
Sbjct: 851  NYIINDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPK 910

Query: 2695 EYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDMEVDGFND 2874
            EYPDFM+KPDK +Y S ++IGKLF++VK+  P  +SI +FT++VAR+SYD DM VDGF D
Sbjct: 911  EYPDFMEKPDKPTYPSEKVIGKLFQKVKNKTPQASSIATFTRDVARKSYDSDMIVDGFED 970

Query: 2875 YVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAISAAVRSLR 3054
            Y+DEAF YK+EYDNKLGNLM+YYGIKTEAEILSGGIMK SKTFDRRKD EAI  AVR LR
Sbjct: 971  YIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEAIGVAVRCLR 1030

Query: 3055 NEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYISFPWCVYDKLIKIK 3234
             E R+WFK+ ++ DD  AKASAWYHVTYH  +WG YN GLKRDH+ISFPWCVYD+LI+IK
Sbjct: 1031 KEARAWFKRRSDIDDMLAKASAWYHVTYHHTYWGLYNEGLKRDHFISFPWCVYDQLIQIK 1090

Query: 3235 KDNSRR--ASDMASLEREFSRRL 3297
            K  +R+     ++SL  + SR+L
Sbjct: 1091 KAKARKRPVPHLSSLGSQLSRKL 1113


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
            gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
            [Nicotiana glutinosa]
          Length = 1117

 Score = 1552 bits (4019), Expect = 0.0
 Identities = 764/1106 (69%), Positives = 908/1106 (82%), Gaps = 5/1106 (0%)
 Frame = +1

Query: 1    ERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEIIMKLASASARLYFGSF 180
            E VK FLE  TG GTV ALEVK SK G R +A+VQF N + AEII+ LAS    LY+G  
Sbjct: 17   EAVKTFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEIIIDLASKG--LYYGPS 74

Query: 181  YLRAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMHF 360
            YL+AWE    I+Q PRT+V  M+ VTLNFGCQ S +KF+VL  ++ VS+KFG G+KK++F
Sbjct: 75   YLKAWEMKTYIVQ-PRTYVQHMDGVTLNFGCQISDKKFAVLG-SKVVSIKFGIGLKKIYF 132

Query: 361  VLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKKLNDSVHSYFRETP 540
             L + S +Y+LQLSYENIWQ+VL+ P+GQ A+ LL+QL GAPRIYK+L DS +S+F+ETP
Sbjct: 133  FLSYGSTDYKLQLSYENIWQVVLHRPYGQKAQFLLLQLSGAPRIYKRLEDSCYSFFKETP 192

Query: 541  DDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRLETGVPFAAN- 717
            DDQW+RTTDFTPS IG SS LCL+   G+RLPNF +SF +YKES +   L+TG  F+ + 
Sbjct: 193  DDQWVRTTDFTPSWIGLSSSLCLEFHNGVRLPNFSESFFYYKESANQVILQTGFTFSFSQ 252

Query: 718  --LALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRFDIRYIEHA 891
              LALVPIVH P G+ELPY+ILFK+  L+Q GC PG  L+ NFF+LVDP+R +I  IEHA
Sbjct: 253  KKLALVPIVHLPEGIELPYKILFKISSLIQHGCFPGLALNFNFFQLVDPRRRNIACIEHA 312

Query: 892  LEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQITPTRVYFSG 1071
            LEKLYY+KECCYDPV WL EQY++Y   R+ P SP+I+LDDGLVYV RV +TP +VYF G
Sbjct: 313  LEKLYYLKECCYDPVRWLTEQYDEYLKRRQLPKSPSITLDDGLVYVRRVLVTPCKVYFCG 372

Query: 1072 PEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTKLYERILST 1251
            PEVNVSNRVLR+Y + +DNFLRVSFVDEEW+K++STDL P+ + G+   RT +Y RILST
Sbjct: 373  PEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKIHSTDLLPRASTGN-GVRTDIYLRILST 431

Query: 1252 LKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDIRNVAKYAAR 1431
            L+ G +IG+KKF+FLAFSSSQLRDNS+WMFA   GL A+ IR WMG F+ IRNVAKYAAR
Sbjct: 432  LRNGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGGFQQIRNVAKYAAR 491

Query: 1432 LGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRVAIKCGFKSA 1611
            LGQSF SS ETLSVG  EVE I D+    +GT Y+FSDGIGKISADFARRVA+KCG +  
Sbjct: 492  LGQSFGSSRETLSVGRHEVEVIPDVVCSLHGTNYIFSDGIGKISADFARRVAVKCGLQY- 550

Query: 1612 TPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQPCFLNRQII 1791
            TPS FQIRYGGYKGVVAVDP SS+KLSLR SMLKY+S N KLDVL WSKYQPC+LNRQ++
Sbjct: 551  TPSCFQIRYGGYKGVVAVDPYSSMKLSLRNSMLKYESNNIKLDVLGWSKYQPCYLNRQLV 610

Query: 1792 TLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKEMLKCGYKP 1971
            TLLSTLGVKD VF+ KQ EAV QLD IL D L+AQEAL+LMSPGEN+NILKEML CGY P
Sbjct: 611  TLLSTLGVKDDVFEQKQNEAVDQLDAILHDTLKAQEALELMSPGENTNILKEMLNCGYMP 670

Query: 1972 DGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVFVQFSGAGRG 2151
            D EPFLSMMLQTFR+SKLLDLR ++RIF+P  R MMGCLDE+  LEYGQVFVQF+G GR 
Sbjct: 671  DAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRTMMGCLDESRTLEYGQVFVQFTGTGRR 730

Query: 2152 GFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHHMVDCVVFPS 2331
             FYEES+   D+ ST+C++++EGNVVVAKNPCLHPGD+RVL+A++V ALHHMVDCVVFP 
Sbjct: 731  QFYEESHPFNDSGSTNCDFILEGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQ 790

Query: 2332 RGMRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDVTIEEVEEYF 2511
            +G RPHPNECSGSDLDGDIYFVCWD DL+PPRQ  PMDY+PAP+++LDHDVTIEEVEEYF
Sbjct: 791  KGKRPHPNECSGSDLDGDIYFVCWDPDLVPPRQFQPMDYTPAPSTQLDHDVTIEEVEEYF 850

Query: 2512 TNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVPAEIPPHLRV 2691
            TNYIVNDSLGIIANAH VFAD+E +MA+S+PC +LA+LFSIAVDFPKTGVPAEIP  LR 
Sbjct: 851  TNYIVNDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRP 910

Query: 2692 KEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDMEVDGFN 2871
            KEYPDFM+KPDK +Y S ++IGKLF++VKD  P  +SI +FT +VAR+SYD DM V+GF 
Sbjct: 911  KEYPDFMEKPDKPTYHSEKVIGKLFQKVKDKTPQASSIANFTMDVARKSYDGDMIVNGFE 970

Query: 2872 DYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAISAAVRSL 3051
            DY+DEAF YK+EYDNKLGNLM+YYGIKTEAEILSGGIMK SKTFDRRKD +AI  AVRSL
Sbjct: 971  DYIDEAFYYKSEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDADAIGVAVRSL 1030

Query: 3052 RNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYISFPWCVYDKLIKI 3231
            R E R+WFK+ ++ DD  AKASAWYHVTYH  +WG YN GLKRDH+ISFPWC+YD+LI+I
Sbjct: 1031 RKEARTWFKRRSDIDDMLAKASAWYHVTYHHTYWGFYNEGLKRDHFISFPWCIYDQLIQI 1090

Query: 3232 KKDNSRR--ASDMASLEREFSRRLNL 3303
            KK  +R+     ++SL  + SR+L L
Sbjct: 1091 KKAKARKKPVLHLSSLGNQLSRKLVL 1116


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
            gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
            [Solanum lycopersicum]
          Length = 1114

 Score = 1551 bits (4016), Expect = 0.0
 Identities = 767/1106 (69%), Positives = 900/1106 (81%), Gaps = 4/1106 (0%)
 Frame = +1

Query: 1    ERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEIIMKLASASARLYFGSF 180
            E VK FLE+ TG GTV ALEVK SK G R +A+VQF +   A+ I+ LA+   RLYFGS 
Sbjct: 17   EVVKSFLEKYTGYGTVCALEVKQSKGGSRAFAKVQFADNISADKIITLANN--RLYFGSS 74

Query: 181  YLRAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMHF 360
            YL+AWE   DI+Q  R +V +M+ +TLNFGCQ S +KF+VL   E VS++FG G+KK  F
Sbjct: 75   YLKAWEMKTDIVQL-RAYVDQMDGITLNFGCQISDDKFAVLGSTE-VSIQFGIGLKKFFF 132

Query: 361  VLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKKLNDSVHSYFRETP 540
             L   S +Y+LQLSYENIWQ+VL+ P+GQ A+ LLIQLFGAPRIYK+L +S +S+F+ETP
Sbjct: 133  FLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETP 192

Query: 541  DDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRLETGVPF--AA 714
            DDQW+RTTDF PS IG SS LCLQ   G+RLPNF++SF  Y E ++   L+TG  F  + 
Sbjct: 193  DDQWVRTTDFPPSWIGLSSSLCLQFRRGVRLPNFEESFFHYAERENNITLQTGFTFFVSQ 252

Query: 715  NLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRFDIRYIEHAL 894
              ALVP V PP G+ +PY+ILFK+  LVQ GC+PGP L+  FFRLVDP+R ++  IEHAL
Sbjct: 253  KSALVPNVQPPEGISIPYKILFKISSLVQHGCIPGPALNVYFFRLVDPRRRNVACIEHAL 312

Query: 895  EKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQITPTRVYFSGP 1074
            EKLYYIKECCYDPV WL EQY+ Y   R+ P SP+I+LDDGLVYV RV +TP +VYF GP
Sbjct: 313  EKLYYIKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGP 372

Query: 1075 EVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTKLYERILSTL 1254
            EVNVSNRVLR+Y + +DNFLRVSFVDEEW+K+YSTDL PK + G    RT +YERILSTL
Sbjct: 373  EVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTDLLPKASTGS-GVRTNIYERILSTL 431

Query: 1255 KEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDIRNVAKYAARL 1434
            ++G +IG+KKF+FLAFSSSQLRDNS+WMFA   GL A+ IR WMGDF  I+NVAKYAARL
Sbjct: 432  RKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRAWMGDFSQIKNVAKYAARL 491

Query: 1435 GQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRVAIKCGFKSAT 1614
            GQSF SS ETLSV   E+E I D++   +GT YVFSDGIGKIS DFA RVA KCG +  T
Sbjct: 492  GQSFGSSRETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISGDFAHRVASKCGLQY-T 548

Query: 1615 PSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQPCFLNRQIIT 1794
            PSAFQIRYGGYKGVV VDPDSS+KLSLR SM KY+S+N KLDVL WSKYQPC+LNRQ+IT
Sbjct: 549  PSAFQIRYGGYKGVVGVDPDSSMKLSLRKSMSKYESDNIKLDVLGWSKYQPCYLNRQLIT 608

Query: 1795 LLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKEMLKCGYKPD 1974
            LLSTLGVKD V + KQ+EAV QLD IL D L+AQEAL+LMSPGEN+NILK ML CGYKPD
Sbjct: 609  LLSTLGVKDEVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYKPD 668

Query: 1975 GEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVFVQFSGAGRGG 2154
             EPFLSMMLQTFR+SKLLDLR ++RIF+P  R MMGCLDE+  LEYGQVFVQF+GAG G 
Sbjct: 669  AEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRTMMGCLDESRTLEYGQVFVQFTGAGHGE 728

Query: 2155 FYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHHMVDCVVFPSR 2334
            F ++ +   ++ ST+ N++++GNVVVAKNPCLHPGD+RVLKA+NV ALHHMVDCVVFP +
Sbjct: 729  FSDDLHPFNNSRSTNSNFILKGNVVVAKNPCLHPGDIRVLKAVNVRALHHMVDCVVFPQK 788

Query: 2335 GMRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDVTIEEVEEYFT 2514
            G RPHPNECSGSDLDGDIYFVCWD D+IPPRQV PM+Y PAP+ +LDHDVTIEEVEEYFT
Sbjct: 789  GKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFT 848

Query: 2515 NYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVPAEIPPHLRVK 2694
            NYIVNDSLGIIANAH VFAD+E +MA+S+PC +LA LFSIAVDFPKTGVPAEIP  LR K
Sbjct: 849  NYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPK 908

Query: 2695 EYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDMEVDGFND 2874
            EYPDFMDKPDK SY S R+IGKLFR+VKD AP  +SI +FT++VARRSYD DMEVDGF D
Sbjct: 909  EYPDFMDKPDKTSYISERVIGKLFRKVKDKAPQASSIATFTRDVARRSYDADMEVDGFED 968

Query: 2875 YVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAISAAVRSLR 3054
            Y+DEAF+YKTEYDNKLGNLM+YYGIKTEAEILSGGIMK SKTFDRRKD EAIS AVR+LR
Sbjct: 969  YIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEAISVAVRALR 1028

Query: 3055 NEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYISFPWCVYDKLIKIK 3234
             E R+WFK+ N+ DD   KASAWYHVTYHP +WG YN GLKR H+ISFPWCVYD+LI+IK
Sbjct: 1029 KEARAWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRAHFISFPWCVYDQLIQIK 1088

Query: 3235 KDNSRR--ASDMASLEREFSRRLNLR 3306
            KD +R     +++SL  + S RL L+
Sbjct: 1089 KDKARNRPVLNLSSLRAQLSHRLVLK 1114


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score = 1533 bits (3969), Expect = 0.0
 Identities = 759/1107 (68%), Positives = 899/1107 (81%), Gaps = 5/1107 (0%)
 Frame = +1

Query: 1    ERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEIIMKLASASARLYFGSF 180
            E VK FLE+ TG GT+ ALEVK SK G R +A+VQF++   A+ I+ LAS   RLYFGS 
Sbjct: 17   EVVKLFLEKHTGYGTICALEVKQSKGGSRAFAKVQFVDNISADKIINLASK--RLYFGSS 74

Query: 181  YLRAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMHF 360
            YL+AWE   DI+Q  R +V  M+ +TLNFGCQ S +KF+VL   E VS+KFG G+KK  F
Sbjct: 75   YLKAWEMKTDIVQL-RAYVDHMDGITLNFGCQISEDKFAVLGSTE-VSIKFGIGLKKFFF 132

Query: 361  VLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKKLNDSVHSYFRETP 540
             L   S +Y+LQLSYENIWQ+VL+ P+GQ A+ LLIQLFGAPRIYK+L +S +S+F+ETP
Sbjct: 133  FLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETP 192

Query: 541  DDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRLETGVPF--AA 714
            DDQW+RTTDFTPS IG SS LCLQ   G+ LPNFQ+SF  Y E ++   L+TG  F  + 
Sbjct: 193  DDQWVRTTDFTPSWIGLSSSLCLQFRRGVHLPNFQESFFHYAERENNITLQTGFTFFVSQ 252

Query: 715  NLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRFDIRYIEHAL 894
              ALVP V PP G+ +PY+ILFK+  LVQ GC+PGP L+  FFRLVDP+R ++  IE AL
Sbjct: 253  KSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNVYFFRLVDPQRRNVACIEQAL 312

Query: 895  EKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQITPTRVYFSGP 1074
            EKLYY+KECCYDPV WL EQY+ Y   R+ P SP+I+LDDGLVYV RV +TP +VYF GP
Sbjct: 313  EKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGP 372

Query: 1075 EVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTKLYERILSTL 1254
            EVNVSNRVLR+Y + +DNFLRVSFVDEEW+K+YST+L PK + G+   RT +YERILSTL
Sbjct: 373  EVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTELLPKASTGN-GIRTNIYERILSTL 431

Query: 1255 KEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDIRNVAKYAARL 1434
            ++G +IG+KKF+FLAFSSSQLRDNS+WMFA   GL  + IR WMGDF  I+NVAKYAARL
Sbjct: 432  RKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRRGLTTNDIRSWMGDFSQIKNVAKYAARL 491

Query: 1435 GQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRVAIKCGFKSAT 1614
            GQSF SS ETLSV   E+E I D++   +GT YVFSDGIGKISADFARRVA KCG +  T
Sbjct: 492  GQSFGSSRETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISADFARRVASKCGLQY-T 548

Query: 1615 PSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQPCFLNRQIIT 1794
            PSAFQIRYGGYKGVVAVDP SS+KLSLR SM KY+S+N KLDVL WSKYQPC+LNRQ++T
Sbjct: 549  PSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLVT 608

Query: 1795 LLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKEMLKCGYKPD 1974
            LLSTLGVKD V + KQ+EAV QLD IL D L+AQEAL+LMSPGEN+NILK ML CGY PD
Sbjct: 609  LLSTLGVKDDVLEQKQKEAVHQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPD 668

Query: 1975 GEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVFVQFSGAGRGG 2154
             EPFLSMMLQTFR+SKLLDLR ++RIF+P  R MMGCLDE+  LEYGQVFVQF+GAG   
Sbjct: 669  AEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHRE 728

Query: 2155 FYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHHMVDCVVFPSR 2334
            F E+ +   ++ ST+CN++++GNVVVAKNPCLHPGD+RVL+A++V ALHHMVDCVVFP +
Sbjct: 729  FSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQK 788

Query: 2335 GMRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDVTIEEVEEYFT 2514
            G RPHPNECSGSDLDGDIYFVCWD D+IPPRQV  M+Y PAP+ +LDH+VTIEEVEEYFT
Sbjct: 789  GKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHNVTIEEVEEYFT 848

Query: 2515 NYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVPAEIPPHLRVK 2694
            NYIVNDSLGIIANAH VFAD+E +MA+S+PC +LA LFSIAVDFPKTGVPAEIP  LR K
Sbjct: 849  NYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPK 908

Query: 2695 EYPDFMDK-PDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDMEVDGFN 2871
            EYPDFMDK PDK +Y S R+IGKLFR+VKD AP  +SI  FT++VARRSYD D+EVDGF 
Sbjct: 909  EYPDFMDKPPDKTTYISERVIGKLFRKVKDKAPQASSIAIFTRDVARRSYDADLEVDGFE 968

Query: 2872 DYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAISAAVRSL 3051
            DY+DEAF+YKTEYDNKLGNLM+YYGIKTEAEILSGGIMK SKTFDRRKD EAIS AVR+L
Sbjct: 969  DYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEAISVAVRAL 1028

Query: 3052 RNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYISFPWCVYDKLIKI 3231
            R E R+WFK+ N+ DD   KASAWYHVTYHP +WG YN GLKRDH+ISFPWCVYD+LI+I
Sbjct: 1029 RKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQI 1088

Query: 3232 KKDNSRR--ASDMASLEREFSRRLNLR 3306
            KK+ +R     +++SL  + S +L L+
Sbjct: 1089 KKEKARNRPVLNLSSLRAQLSHKLVLK 1115


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score = 1529 bits (3959), Expect = 0.0
 Identities = 760/1107 (68%), Positives = 897/1107 (81%), Gaps = 5/1107 (0%)
 Frame = +1

Query: 1    ERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEIIMKLASASARLYFGSF 180
            E VK FLE+ TG GTV ALEVK SK G R +A+VQF++   A+ I+ LAS   RLYFGS 
Sbjct: 17   EVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADKIINLASK--RLYFGSS 74

Query: 181  YLRAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMHF 360
            YL+AWE   DI+Q  R +V  M+ +TLNFGCQ S +KF+VL   E VS+KFG G+KK  F
Sbjct: 75   YLKAWEMKTDIVQL-RAYVDHMDGITLNFGCQISDDKFAVLGSTE-VSIKFGIGLKKFFF 132

Query: 361  VLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKKLNDSVHSYFRETP 540
             L   S +Y+LQLSYENIWQ+VL+ P+GQ A+ LLIQLFGAPRIYK+L +S +S+F+ETP
Sbjct: 133  FLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETP 192

Query: 541  DDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRLETGVPF--AA 714
            DDQW+RTTDF PS IG SS LCLQ   G+ LPNFQ+SF  Y E ++   L+TG  F  + 
Sbjct: 193  DDQWVRTTDFAPSWIGLSSSLCLQFRRGVHLPNFQESFFHYAERENNITLQTGFTFFVSQ 252

Query: 715  NLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRFDIRYIEHAL 894
              ALVP V PP G+ +PY+ILFK+  LVQ GC+PGP L+ NFFRLVDP+R ++  IE AL
Sbjct: 253  KSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNVNFFRLVDPQRRNVACIEQAL 312

Query: 895  EKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQITPTRVYFSGP 1074
            EKLYY+KECCYDPV WL EQY+ Y   R+ P SP+I+LDDGLVYV RV +TP +VYF GP
Sbjct: 313  EKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSINLDDGLVYVRRVLVTPCKVYFCGP 372

Query: 1075 EVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTKLYERILSTL 1254
            EVNVSNRVLR+Y + +DNFLRVSFVDEEW+K+YSTDL PK + G+   RT +Y RILSTL
Sbjct: 373  EVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTDLLPKASTGN-GIRTNIYVRILSTL 431

Query: 1255 KEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDIRNVAKYAARL 1434
            ++G +IG+KKF+FLAFSSSQLRDNS+WMFA   GL A  IR WMGDF  I+NVAKYAARL
Sbjct: 432  QKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTAIDIRTWMGDFSQIKNVAKYAARL 491

Query: 1435 GQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRVAIKCGFKSAT 1614
            GQSF SS ETLSV   E+E I D++   +GT YVFSDGIGKISADFARRVA KCG +  T
Sbjct: 492  GQSFGSSKETLSVLRHEIEIIPDVKV--HGTSYVFSDGIGKISADFARRVASKCGLQY-T 548

Query: 1615 PSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQPCFLNRQIIT 1794
            PSAFQIRYGGYKGVVAVDP SS+KLSLR SM KY+S+N KLDVL WSKYQPCFLNRQ++T
Sbjct: 549  PSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLEWSKYQPCFLNRQLVT 608

Query: 1795 LLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKEMLKCGYKPD 1974
            LLSTLGVKD V + KQ+EAV QLD IL D L+AQEAL+LMSPGEN+NILK ML CGY PD
Sbjct: 609  LLSTLGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPD 668

Query: 1975 GEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVFVQFSGAGRGG 2154
             EPFLSMMLQTFR+SKLLDLR ++RIF+P  R MMGCLDE+  LEYGQVFVQF+G+G   
Sbjct: 669  AEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGSGHRE 728

Query: 2155 FYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHHMVDCVVFPSR 2334
            F E+ +   ++ ST+CN++++GNVVVAKNPCLHPGD+RVL+A++V ALHHMVDCVVFP +
Sbjct: 729  FSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQK 788

Query: 2335 GMRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDVTIEEVEEYFT 2514
            G RPHPNECSGSDLDGDIYFVCWD D+IPPRQV  M+Y PAP+ +LDHDVTIEEVEEYFT
Sbjct: 789  GKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHDVTIEEVEEYFT 848

Query: 2515 NYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVPAEIPPHLRVK 2694
            NYIVNDSLGIIANAH VFAD+E +MA+S+PC +LA LFSIAVDFPKTGVPAEIP  LR K
Sbjct: 849  NYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPK 908

Query: 2695 EYPDFMDK-PDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDMEVDGFN 2871
            EYPDFMDK PDK +Y S R+IGKL+R+VKD AP  +S   FT++VARRSYD D+EVDGF 
Sbjct: 909  EYPDFMDKPPDKTTYISERVIGKLYRKVKDKAPQASSTAIFTRDVARRSYDADLEVDGFE 968

Query: 2872 DYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAISAAVRSL 3051
            DY+DEAF+YKTEYDNKLGNLM+YYGIKTEAEILSGGIMK SKTFDRRKD EAIS AVR+L
Sbjct: 969  DYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRAL 1028

Query: 3052 RNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYISFPWCVYDKLIKI 3231
            R E R+WFK+ N+ DD   KASAWYHVTYHP +WG YN GLKRDH+ISFPWCVYD+LI+I
Sbjct: 1029 RKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQI 1088

Query: 3232 KKDN--SRRASDMASLEREFSRRLNLR 3306
            KK+   +R   +++SL  + S +L L+
Sbjct: 1089 KKEKALNRPVLNLSSLRAQLSHKLVLK 1115


>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
            tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
            tuberosum]
          Length = 1115

 Score = 1525 bits (3948), Expect = 0.0
 Identities = 759/1107 (68%), Positives = 897/1107 (81%), Gaps = 5/1107 (0%)
 Frame = +1

Query: 1    ERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEIIMKLASASARLYFGSF 180
            E VK FLE+ TG GTV ALEVK SK G R +A+VQF++   A+ I+ LAS   RLYFGS 
Sbjct: 17   EVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADKIINLASK--RLYFGSS 74

Query: 181  YLRAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMHF 360
            YL+A E   D++Q    +V  M+ +TLNFGCQ S +KF+VL   E VS+KFG G+KK  F
Sbjct: 75   YLKAREMETDLVQLWE-YVDHMDGITLNFGCQISDDKFAVLGSTE-VSIKFGIGLKKFFF 132

Query: 361  VLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKKLNDSVHSYFRETP 540
             L   S +Y+LQLSYENIWQ+VL+ P+GQ A+ LLIQLFGAPRIYK+L +S +S+F+ETP
Sbjct: 133  FLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETP 192

Query: 541  DDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRLETGVPF--AA 714
            DDQW+RTTDF PS IG SS LCLQ   G+ LPNFQ+SF  Y E ++   L+TG  F  + 
Sbjct: 193  DDQWVRTTDFAPSWIGLSSSLCLQFRRGVHLPNFQESFFHYAERENNITLQTGFTFFVSQ 252

Query: 715  NLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRFDIRYIEHAL 894
              ALVP V PP G+ +PY+ILFK+  LVQ GC+PGP L+  FFRLVDP+R ++  IE AL
Sbjct: 253  KSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNVYFFRLVDPQRRNVACIEQAL 312

Query: 895  EKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQITPTRVYFSGP 1074
            EKLYY+KECCYDPV WL EQY+ Y   R+ P SP+I+LDDGLVYV RV +TP +VYF GP
Sbjct: 313  EKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSINLDDGLVYVRRVLVTPCKVYFCGP 372

Query: 1075 EVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTKLYERILSTL 1254
            EVNVSNRVLR+Y + +DNFLRVSFVDEEW+K+YSTDL PK + G+   RT +YERILSTL
Sbjct: 373  EVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTDLLPKASTGN-GIRTNIYERILSTL 431

Query: 1255 KEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDIRNVAKYAARL 1434
            ++G +IG+KKF+FLAFSSSQLRDNS+WMFA   GL A  IR WMGDF  I+NVAKYAARL
Sbjct: 432  RKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTAIDIRTWMGDFSQIKNVAKYAARL 491

Query: 1435 GQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRVAIKCGFKSAT 1614
            GQSF SSTETLSV   E+E I D++   +GT YVFSDGIGKISADFARRVA KCG +  T
Sbjct: 492  GQSFGSSTETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISADFARRVASKCGLQH-T 548

Query: 1615 PSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQPCFLNRQIIT 1794
            PSAFQIRYGGYKGVVAVDP SS+KLSLR SM KY+S+N KLDVL WSKYQPC+LNRQ++T
Sbjct: 549  PSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLVT 608

Query: 1795 LLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKEMLKCGYKPD 1974
            LLSTLGVKD V + KQ+EAV QLD IL D L+AQEAL+LMSPGEN+NILK ML CGY PD
Sbjct: 609  LLSTLGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPD 668

Query: 1975 GEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVFVQFSGAGRGG 2154
             EPFLSMMLQTFR+SKLLDLR K+RIF+P  R MMGCLDE+  LEYGQVFVQF+G+G   
Sbjct: 669  AEPFLSMMLQTFRASKLLDLRTKSRIFIPNGRLMMGCLDESRTLEYGQVFVQFTGSGHRE 728

Query: 2155 FYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHHMVDCVVFPSR 2334
            F E+ +   ++ ST+CN++++GNVVVAKNPCLHPGD+RVL+A++V ALHHMVDCVVFP +
Sbjct: 729  FSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQK 788

Query: 2335 GMRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDVTIEEVEEYFT 2514
            G RPHPNECSGSDLDGDIYFVCWD D+IPPRQV  M+Y PAP+ +LDHDVTIEEVEEYFT
Sbjct: 789  GKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHDVTIEEVEEYFT 848

Query: 2515 NYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVPAEIPPHLRVK 2694
            NYIVNDSLGIIANAH VFAD+E +MA+S+PC +LA L SIAVDFPKTGVPAEIPP LR K
Sbjct: 849  NYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELCSIAVDFPKTGVPAEIPPQLRPK 908

Query: 2695 EYPDFMDK-PDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDMEVDGFN 2871
            EYPDFMDK PDK +Y S R+IGKL+R+VKD AP  +S   FT++VARRSYD D+EVDGF 
Sbjct: 909  EYPDFMDKPPDKTTYISERVIGKLYRKVKDKAPQASSTAIFTRDVARRSYDADLEVDGFE 968

Query: 2872 DYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAISAAVRSL 3051
            DY+DEAF+YKTEYDNKLGNLM+YYGIKTEAEILSGGIMK SKTFDRRKD EAIS AVR+L
Sbjct: 969  DYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRAL 1028

Query: 3052 RNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYISFPWCVYDKLIKI 3231
            R E R+WFK+ N+ DD   KASAWYHVTYHP +WG YN GLKRDH+ISFPWCVYD+LI+I
Sbjct: 1029 RKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQI 1088

Query: 3232 KKDNSRR--ASDMASLEREFSRRLNLR 3306
            KK+ +R     +++SL  + SR+L L+
Sbjct: 1089 KKEKARNRPVLNLSSLRAQLSRKLVLK 1115


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score = 1507 bits (3902), Expect = 0.0
 Identities = 751/1111 (67%), Positives = 889/1111 (80%), Gaps = 10/1111 (0%)
 Frame = +1

Query: 1    ERVKRFLEQITGQGTVIALEVKPSKRGPR-PYARVQFMNIRCAEIIMKLASASARLYFGS 177
            + +K FLE+ TG+GT+ ALE+K  + G    +A+VQF +   AE I+ L     ++++G 
Sbjct: 17   DEIKEFLEKYTGEGTIEALEIKQPRSGASMTHAKVQFTSFELAEFIITLCKK--KVWYGR 74

Query: 178  FYLRAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMH 357
             YL+A E  +DII  PR F+H M+++TL+FGCQ S E+F VLWKA +VSVKFG+G++K +
Sbjct: 75   NYLKAREMDLDIIPKPRAFLHSMDRITLHFGCQMSDERFCVLWKAINVSVKFGSGLRKFY 134

Query: 358  FVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKKLNDSVHSYFRET 537
            F L H S EY+L+LSYENIWQI L +P GQ  K LLIQL GAP+IY+K    +  YF+E 
Sbjct: 135  FFLSHGSEEYKLELSYENIWQIQLQHPRGQITKFLLIQLLGAPQIYEKDVPVLSYYFKEA 194

Query: 538  PDDQWIRTTDFTPSC-IGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRLETGVPFAA 714
            PDDQW+R  DFTPSC IGQS  LCL+LPYG +LPNF+++F +YKE+   F LE+G  ++ 
Sbjct: 195  PDDQWVREIDFTPSCFIGQSFALCLELPYGSQLPNFRENFAYYKENDGKFILESGSSYSH 254

Query: 715  NLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRFDIRYIEHAL 894
            NL LVPI+ PP+G  LP++ILFK+  LVQ GCL GP LDT+FFRLVDP+RF I +IEHAL
Sbjct: 255  NLHLVPILGPPQGSSLPFQILFKINTLVQNGCLSGPTLDTSFFRLVDPERFPISFIEHAL 314

Query: 895  EKLYYIKECCYDPVAWLNEQYEKYRTFREQP--NSPAISLDDGLVYVHRVQITPTRVYFS 1068
            EKLY++KECCY+PV WL+EQY   RT+ ++P   SPAISLD GLVYV RVQITP +VYF 
Sbjct: 315  EKLYHLKECCYEPVRWLSEQY---RTYVKKPVAGSPAISLDTGLVYVRRVQITPCKVYFC 371

Query: 1069 GPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTKLYERILS 1248
            GPEVNVSNRVLR+Y + +DNFLRVSF+DE  +K++ST +SP+++   E +RT +Y RILS
Sbjct: 372  GPEVNVSNRVLRNYPEDIDNFLRVSFLDENLEKIHSTVISPRMSK--EGRRTGVYRRILS 429

Query: 1249 TLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDIRNVAKYAA 1428
             L+ GI+IG+KKFDFLAFSSSQLRDNS WMFA   GL A  IR WMGDF  IRNVAKYAA
Sbjct: 430  ILQNGIVIGDKKFDFLAFSSSQLRDNSAWMFASRPGLTAAEIRSWMGDFSQIRNVAKYAA 489

Query: 1429 RLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRVAIKCGFKS 1608
            RLGQSFSSS ETL V + E+E I DIE  +  T YVFSDGIGKIS   A RVAIKCG KS
Sbjct: 490  RLGQSFSSSKETLKVAKDEIENIPDIEIHKGRTTYVFSDGIGKISPQLAHRVAIKCGCKS 549

Query: 1609 ATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQPCFLNRQI 1788
            +TPSAFQIRYGGYKGVVAVDP SS KLSLR SM KY+S+NT LDVL+WSKYQP FLNRQ+
Sbjct: 550  STPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESDNTNLDVLAWSKYQPSFLNRQL 609

Query: 1789 ITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKEMLKCGYK 1968
            ITLLSTLGVKD+VF+ KQR AV QLD IL DP+ AQEAL+LMSPGEN+N+LKEML CGYK
Sbjct: 610  ITLLSTLGVKDHVFEKKQRAAVDQLDTILKDPVAAQEALELMSPGENTNVLKEMLMCGYK 669

Query: 1969 PDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVFVQFSGAGR 2148
            PD EPFLSMMLQTFR++KLL+LR K RIFVP  R MMGCLDET  LEYG+VFVQ SG G 
Sbjct: 670  PDAEPFLSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQISGTGG 729

Query: 2149 GGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHHMVDCVVFP 2328
               + +S M   + S   N+++EG +VVAKNPCLHPGDVRVL A+NV  LHHMVDCVVFP
Sbjct: 730  RQSFGDSLMFRGSGSHHDNFILEGKIVVAKNPCLHPGDVRVLWAVNVPTLHHMVDCVVFP 789

Query: 2329 SRGMRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDVTIEEVEEY 2508
             +G RPHPNECSGSDLDGDIYFVCWD DLIPP+Q++PMDY+PAPT  LDHDV IEEVEEY
Sbjct: 790  QKGKRPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEY 849

Query: 2509 FTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVPAEIPPHLR 2688
            FTNYIVNDSLGIIANAHTVFADKE + A  +PC ELA+LFSIAVDFPKTGVPAEIP +LR
Sbjct: 850  FTNYIVNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPAEIPRNLR 909

Query: 2689 VKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDMEVDGF 2868
            VKEYPDFM+K DK +YES  +IGKLFREVKDIAPH  +IRSFT++VAR+SYDPDMEV GF
Sbjct: 910  VKEYPDFMEKADKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGF 969

Query: 2869 NDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAISAAVRS 3048
             DYV +AF YK+EYD KLGNLM+YYGIKTE+EILSG IM+MSK+FDRRKD EAI  AV+S
Sbjct: 970  EDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKS 1029

Query: 3049 LRNEVRSWFKK-----GNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYISFPWCVY 3213
            LR E R+WF K      +E+DD YAKASAWYHVTYHPD+WG YN G+ RDH++SFPWCVY
Sbjct: 1030 LRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVY 1089

Query: 3214 DKLIKIK-KDNSRRASDMASLEREFSRRLNL 3303
            DKLI  K K  S R+  ++SLER  S+ L L
Sbjct: 1090 DKLIHTKRKKMSGRSLHLSSLERRLSQGLRL 1120


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score = 1499 bits (3880), Expect = 0.0
 Identities = 737/1116 (66%), Positives = 890/1116 (79%), Gaps = 15/1116 (1%)
 Frame = +1

Query: 1    ERVKRFLEQITGQGTVIALEVKPSKRGP-RPYARVQFMNIRCAEIIMKLASASARLYFGS 177
            E VK FLE  TG GTV AL+++  K+G  R YA VQF     A+ I+ LA  + +L++G 
Sbjct: 17   EAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADTIISLACRTEKLWYGR 76

Query: 178  FYLRAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMH 357
             YL A     D +  PRTF+H ME + L+FGC+ S EKF+VLW+  +V+V FG GM+K++
Sbjct: 77   SYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNEKFAVLWRGVNVTVNFGFGMRKIN 136

Query: 358  FVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKK--------LNDS 513
            F+L H   EYRL+L YENIW+I L+ P  Q  K LLIQL GAPRI++K            
Sbjct: 137  FLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRSPDLLYESP 196

Query: 514  VHSYFRETPDDQWIRTTDFTPS-CIGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRL 690
            V ++F+E PDDQW+RTTDFTPS  IGQS+GLC++LPY + LP+F+++F +YKES+D F L
Sbjct: 197  VFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLELPDFKENFAYYKESEDRFVL 256

Query: 691  ETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKR-- 864
            ETG  ++ +L LVPIV PP G+ LPY ILFK+  LVQ GC+ GP LD+NF+RLVDP R  
Sbjct: 257  ETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFYRLVDPYRAP 316

Query: 865  FDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQI 1044
              I  IEHAL+KLY++KECCY+P  WL +QY KY T R +P+SPAISLDDGLVYVHRVQ+
Sbjct: 317  VSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSPAISLDDGLVYVHRVQV 376

Query: 1045 TPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRT 1224
            TP+RVYF GPE+NVSNRVLRH+R  +DNFLR+SF+DE+ DK++STDLSP+ ++  +  RT
Sbjct: 377  TPSRVYFCGPEINVSNRVLRHFRRDIDNFLRISFIDEDLDKIHSTDLSPRGSSATDITRT 436

Query: 1225 KLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDI 1404
            ++Y RILSTL+ GI+IG++KF+FLAFSSSQLR++S WMFA   GL A  IR WMG+FR+I
Sbjct: 437  RIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREI 496

Query: 1405 RNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRV 1584
            RNVAKYAARLGQSFSSS ETLSV   E+E I D++     TKYVFSDGIGK+SA+FAR+V
Sbjct: 497  RNVAKYAARLGQSFSSSKETLSVHMDEIEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKV 556

Query: 1585 AIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQ 1764
            A KCG K   PSAFQIRYGGYKGVVA DP SS KLSLR SM KY+SE TKLDVL+WSKYQ
Sbjct: 557  ASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQ 616

Query: 1765 PCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILK 1944
            PCFLNRQ+I+LLSTLG+ D +F+ KQREAV QLD IL DPL+AQEAL+LMSPGEN+NILK
Sbjct: 617  PCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILK 676

Query: 1945 EMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVF 2124
            E+L CGYKPD EPFLSMMLQTFR+SKLL+LR K RIF+P  R MMGCLDET  L YGQVF
Sbjct: 677  ELLICGYKPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVF 736

Query: 2125 VQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHH 2304
            VQ SGAG    + ES++ + +  +   ++V+G VVVAKNPCLHPGDVRVLKA+NV ALHH
Sbjct: 737  VQISGAGYRQLHGESSL-FSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHH 795

Query: 2305 MVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDV 2484
            MVDCVVFP +GMRPHPNECSGSDLDGDIYFVCWD +LIPP+Q  PMDY+PA + +LDHDV
Sbjct: 796  MVDCVVFPQKGMRPHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDV 855

Query: 2485 TIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVP 2664
             IE+VEEYFTNYIVNDSLGIIANAHTVFAD+E + A SEPCL+LA  FSIAVDFPKTGVP
Sbjct: 856  QIEDVEEYFTNYIVNDSLGIIANAHTVFADREPHKARSEPCLQLAEKFSIAVDFPKTGVP 915

Query: 2665 AEIPPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYD 2844
            AEIPPHL VKEYPDFM+KPDK +YES  +IGKLFR VKDIAPHT+ IR FTKEVARRSYD
Sbjct: 916  AEIPPHLYVKEYPDFMEKPDKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYD 975

Query: 2845 PDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVE 3024
            PDMEVDGF D++D+A  +K  YD KLGNLM+YYGIKTEAEIL+G IMKMSK+F +R+D E
Sbjct: 976  PDMEVDGFEDHIDDAIYHKGNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAE 1035

Query: 3025 AISAAVRSLRNEVRSWFKKGNES---DDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYIS 3195
            AI  AVR+LR E R+WFK+ + S   DD YAKASAWYHVTYHPD+WG YN G+ RDH++S
Sbjct: 1036 AIGMAVRALRKEARAWFKEKSGSDTEDDAYAKASAWYHVTYHPDYWGCYNHGMNRDHFLS 1095

Query: 3196 FPWCVYDKLIKIKKDNSRRASDMASLEREFSRRLNL 3303
            FPWCVYD+L++IKKD +   +   +LE++F + L +
Sbjct: 1096 FPWCVYDRLVEIKKDKTSIGNAFPALEQQFRQGLRM 1131


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
            family protein [Populus trichocarpa]
          Length = 1133

 Score = 1497 bits (3875), Expect = 0.0
 Identities = 746/1117 (66%), Positives = 890/1117 (79%), Gaps = 18/1117 (1%)
 Frame = +1

Query: 7    VKRFLEQITGQGTVIALEVKPSKRG-PRPYARVQFMNIRCAEIIMKLASASARLYFGSFY 183
            V+ FLE  TG GTV AL+++  + G  R YA VQF   R AE I+ LA+   RL++G  Y
Sbjct: 19   VQVFLESHTGGGTVEALKIREIRTGGARKYAIVQFTTTRAAEQIISLANP--RLWYGHSY 76

Query: 184  LRAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMHFV 363
            L A     DII  PR+F+H ME VTL+FG QTS+EKFS +W   +VSV FG GM+K+HF 
Sbjct: 77   LNARPMDRDIIPQPRSFLHTMESVTLHFGYQTSKEKFSAVWSGNNVSVNFGLGMRKLHFF 136

Query: 364  LCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKK--------LNDSVH 519
            L HN  EY+L L +ENIWQI L+ P GQT K LLIQL+GAPRIY++          D + 
Sbjct: 137  LSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPRIYERDVPSSSNVFEDPLL 196

Query: 520  SYFRETPDDQWIRTTDFTPSC-IGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRLET 696
            +YFR+ PD+QW+RTTDFTPSC IG SS LCL+LP  ++LPNF ++F +YKE++  F LE+
Sbjct: 197  NYFRDVPDEQWVRTTDFTPSCGIGHSSSLCLELPNHLQLPNFNENFFYYKENEGTFVLES 256

Query: 697  GVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRFDIR 876
            G+ F+ N  LVPIV P  G+ LPY ILF+V  LVQ GCL G  LD  F+RLVDP R  +R
Sbjct: 257  GLTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGSMLDDIFYRLVDPNRMPVR 316

Query: 877  YIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQITPTR 1056
             IE+ALEKLY++KECCY+P  W NEQY+KY T    P SP +SLD GLVYV++VQITP +
Sbjct: 317  CIEYALEKLYHLKECCYEPSKWFNEQYKKYLTSGNPPRSPVLSLDAGLVYVYKVQITPCK 376

Query: 1057 VYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTKLYE 1236
            V+F GPEVNVSNRVLR YR+ +DNFLRVSFVDEE +K++STD+SP+ ++ +E +RT +Y 
Sbjct: 377  VFFCGPEVNVSNRVLRQYREDIDNFLRVSFVDEELEKIHSTDVSPRTSSRNELRRTAIYN 436

Query: 1237 RILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDIRNVA 1416
            RILSTL+ GI+IG+KKF+FLAFSSSQLR+NS WMFA   GL A  IR WMG F  IRNVA
Sbjct: 437  RILSTLQNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGLTAADIRAWMGSFHKIRNVA 496

Query: 1417 KYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRVAIKC 1596
            +YAARLGQSF SSTETLSV   E+E I DIE  R GT+Y+FSDGIGKISA+FAR+VAIKC
Sbjct: 497  RYAARLGQSFGSSTETLSVSSHEIEIIPDIEVSRGGTRYLFSDGIGKISAEFARKVAIKC 556

Query: 1597 GFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQPCFL 1776
            G K  TPSAFQIRY GYKGVVAVDP SS KLSLR SM KY+SENTKLDVL+ SKYQPCFL
Sbjct: 557  GCKGFTPSAFQIRYAGYKGVVAVDPTSSKKLSLRRSMFKYESENTKLDVLAHSKYQPCFL 616

Query: 1777 NRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKEMLK 1956
            NRQ+ITLLSTLGV D+ F+ KQREAV QLD +L DPLRAQEAL+LMSPGEN+NILKEML 
Sbjct: 617  NRQLITLLSTLGVPDHHFERKQREAVDQLDAMLTDPLRAQEALELMSPGENTNILKEMLL 676

Query: 1957 CGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVFVQFS 2136
            CGY+PD EPFLSMMLQTFR+SKLL+LR K RIF+P  R MMGCLDET  LE+GQVFV+FS
Sbjct: 677  CGYQPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLEHGQVFVKFS 736

Query: 2137 GAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHHMVDC 2316
            G+     Y+ S+M  +     C Y+++G+VVVAKNPCLHPGD+R+LKA++V ALHHMVDC
Sbjct: 737  GSRFRNLYDSSDMFSERGRGQC-YLIKGSVVVAKNPCLHPGDLRILKAVDVPALHHMVDC 795

Query: 2317 VVFPSRGMRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDVTIEE 2496
            VVFP +G RPHPNECSGSDLDGDIYFVCWD +LIP +Q+SPMDY+P P  +LDHDVTIEE
Sbjct: 796  VVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIPSQQISPMDYTPEPPLQLDHDVTIEE 855

Query: 2497 VEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVPAEIP 2676
            VEEYFTNYIVNDSLG+IANAHT  ADKE+  A+SEPC+ELAR FSIAVDFPKTGVPAEIP
Sbjct: 856  VEEYFTNYIVNDSLGVIANAHTAHADKESLKAMSEPCVELARKFSIAVDFPKTGVPAEIP 915

Query: 2677 PHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDME 2856
             +LR +EYPDFM+KPDK SYES  +IGKLFREVKDIAP T+SIRSFT +VAR+ YDPDME
Sbjct: 916  SNLRAREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDME 975

Query: 2857 VDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAISA 3036
            VDGF DY+D+AF YK+ YD KLGNLMEYYGIKTEAE+LSG  MKMSK+F +++D EAI  
Sbjct: 976  VDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRDAEAIGM 1035

Query: 3037 AVRSLRNEVRSWF-KKG----NESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYISFP 3201
            AVRSL+ E RSWF +KG    +++DD  AKASAWYHVTYH ++WG YN G+ RDH++SFP
Sbjct: 1036 AVRSLKKEARSWFNEKGSGLDSQADDVDAKASAWYHVTYHHNYWGCYNEGMNRDHFLSFP 1095

Query: 3202 WCVYDKLIKIKKDNS---RRASDMASLEREFSRRLNL 3303
            WCVYDKLI+IK+ NS   RR+  + S+ER+FSR L+L
Sbjct: 1096 WCVYDKLIQIKRRNSARIRRSLILPSVERQFSRGLHL 1132


>gb|EPS70289.1| hypothetical protein M569_04468, partial [Genlisea aurea]
          Length = 1095

 Score = 1487 bits (3849), Expect = 0.0
 Identities = 732/1096 (66%), Positives = 881/1096 (80%), Gaps = 1/1096 (0%)
 Frame = +1

Query: 1    ERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEIIMKLASASARLYFGSF 180
            + VK+ +E+ TGQGTV+AL+V+ SK GPR YA VQF++ R AE+I+    A   LY+GS 
Sbjct: 17   DSVKQLVERYTGQGTVVALKVEASKSGPRAYAVVQFLDARSAEMIVH---AQNSLYYGSS 73

Query: 181  YLRAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMHF 360
            YL+   S  ++++NP T +  ++QVTL+FGCQ S  KFSVLW    V+VKFGT +K + F
Sbjct: 74   YLKVRYSDKELVRNPATNLQLIDQVTLHFGCQISGNKFSVLWSCSDVTVKFGTQLKTISF 133

Query: 361  VLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKKLNDSVHSYFRETP 540
            +L      Y LQLSY++IW+ VLYNP     KLL IQLFGAPRI KK+  S +SY+    
Sbjct: 134  ILFDGLYNYMLQLSYKSIWKTVLYNPSSGRRKLL-IQLFGAPRISKKVEGSPYSYYNVYT 192

Query: 541  DDQWIRTTDFTPSC-IGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRLETGVPFAAN 717
            +DQW+RTTDFT +  IGQSSGLCL+ P+G RLP F+D FV++KE ++ F L+ G  F+ N
Sbjct: 193  EDQWVRTTDFTRAALIGQSSGLCLEFPHGSRLPRFRDDFVYFKEKEEEFHLQEGYSFSQN 252

Query: 718  LALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRFDIRYIEHALE 897
              L PIV PPRGL LPY I+FK+C LVQ GC+PGP+LD NF+R+V+P+  DIRYIEHALE
Sbjct: 253  SVLAPIVGPPRGLSLPYNIVFKICSLVQMGCIPGPELDANFYRMVNPQLVDIRYIEHALE 312

Query: 898  KLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQITPTRVYFSGPE 1077
            K++Y+KECCYDPV WL  QY +Y+T   +P+SP ISL+ GLVYV RVQITP+RVYF+GPE
Sbjct: 313  KIFYLKECCYDPVKWLESQYRRYQT--SKPSSPTISLEGGLVYVRRVQITPSRVYFTGPE 370

Query: 1078 VNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTKLYERILSTLK 1257
            +NVSNRVLR Y+D +D+FLRVSFVDE+WDK++S  LS K   G    +T++YERILS L+
Sbjct: 371  INVSNRVLRQYKDRIDDFLRVSFVDEDWDKLFSLTLSSKTEIG----KTRIYERILSVLR 426

Query: 1258 EGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDIRNVAKYAARLG 1437
            EGI IG+K+FDFLAFSSSQLR+NSLWMFAP+NG+ AD IR+WMGDFR IRNVAKYAARLG
Sbjct: 427  EGIRIGDKRFDFLAFSSSQLRENSLWMFAPSNGVTADDIRKWMGDFRSIRNVAKYAARLG 486

Query: 1438 QSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRVAIKCGFKSATP 1617
            QSF SSTETL+V   E   I DI        Y FSDGIGKISADFARRVA KC F    P
Sbjct: 487  QSFGSSTETLTVQRDEYLLIPDITRQTGDKTYTFSDGIGKISADFARRVAAKCRFTHRVP 546

Query: 1618 SAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQPCFLNRQIITL 1797
            SAFQIRYGG+KGVVAVDP S++KLSLRPSM KY+S+NTKLDVLSWSKY PCFLNRQIITL
Sbjct: 547  SAFQIRYGGFKGVVAVDPSSNMKLSLRPSMKKYESDNTKLDVLSWSKYLPCFLNRQIITL 606

Query: 1798 LSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKEMLKCGYKPDG 1977
            LSTLGV+D VF  KQREAVAQLD+ILVDPLRAQE LDLM+PGENS+ILKEMLKCGYKPD 
Sbjct: 607  LSTLGVEDRVFLKKQREAVAQLDEILVDPLRAQEVLDLMAPGENSHILKEMLKCGYKPDE 666

Query: 1978 EPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVFVQFSGAGRGGF 2157
            EPFLSMML+ FRSSKLLDLR K+RIFVP+ARQ+MGCLDETG LEYG+VFVQ SG+ +  F
Sbjct: 667  EPFLSMMLRAFRSSKLLDLRTKSRIFVPEARQLMGCLDETGTLEYGEVFVQISGSRQRQF 726

Query: 2158 YEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHHMVDCVVFPSRG 2337
            + +          D N VV G V VAKNPCLHPGD+RV+KA++V  LHHMVDC+VFP +G
Sbjct: 727  FFDGPA--VGTVNDYNSVVSGTVFVAKNPCLHPGDIRVVKAVDVPILHHMVDCLVFPQKG 784

Query: 2338 MRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDVTIEEVEEYFTN 2517
             RP P+ECSGSDLDGDIYFVCWD+DL P +Q  PMDY PAPT+RLDHDVT++EV++YFT+
Sbjct: 785  HRPLPDECSGSDLDGDIYFVCWDTDLFPLQQDPPMDYDPAPTTRLDHDVTMQEVQKYFTD 844

Query: 2518 YIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVPAEIPPHLRVKE 2697
            YIVND+LG+IANAHT FAD+E   A S PCLELA+LFS+AVDFPKTGVPA IP +LRVKE
Sbjct: 845  YIVNDTLGVIANAHTAFADRERAKARSPPCLELAKLFSVAVDFPKTGVPANIPYNLRVKE 904

Query: 2698 YPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDMEVDGFNDY 2877
            +PDFM+K D+ SY+S  ++GKL+REV+DI P   SI +FT++VA RSYDPD+E+ G+ DY
Sbjct: 905  FPDFMEKSDRVSYQSENVLGKLYREVRDIEP--LSITAFTRDVAERSYDPDLEIPGYEDY 962

Query: 2878 VDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAISAAVRSLRN 3057
            V+EA  YK EYD KLGNLM+YYG+KTEAE+L+GGI+KMSKTFDRRKD EA++ AVR+LRN
Sbjct: 963  VEEAHSYKDEYDYKLGNLMDYYGVKTEAEMLTGGILKMSKTFDRRKDAEAVADAVRALRN 1022

Query: 3058 EVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYISFPWCVYDKLIKIKK 3237
            E RSWF+   E DD YAKASAWYHVTYHPD+WG YN GL+RDH+ISFPWCV+DKLIKIK+
Sbjct: 1023 EARSWFRA--EDDDAYAKASAWYHVTYHPDYWGCYNEGLRRDHFISFPWCVHDKLIKIKR 1080

Query: 3238 DNSRRASDMASLEREF 3285
            D S R+  +AS  R F
Sbjct: 1081 D-SVRSQGLASRFRRF 1095


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score = 1483 bits (3840), Expect = 0.0
 Identities = 740/1085 (68%), Positives = 875/1085 (80%), Gaps = 7/1085 (0%)
 Frame = +1

Query: 7    VKRFLEQITGQGTVIALEVKPSKRG-PRPYARVQFMNIRCAEIIMKLASASARLYFGSFY 183
            +K FLE+ TG+GT+ ALE+K  K G    +A+VQF ++R AE+I+ LA    +L++G  Y
Sbjct: 19   IKEFLEKYTGEGTIEALEIKQPKSGVSMTHAKVQFTSLRLAELIISLAK---QLWYGGNY 75

Query: 184  LRAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMHFV 363
            L+A E  +DII  PRTF+H M+++TL+FG Q S E+F VLWKA +VSVKFG G++K +F 
Sbjct: 76   LKAREMDLDIIPKPRTFLHSMDRITLHFGYQMSNERFCVLWKAINVSVKFGFGLRKFYFF 135

Query: 364  LCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKKLNDSVHSYFRETPD 543
            L H S EY+L+LS ENIWQI L  P GQ  K LLIQL  AP+IY+K + S  SYF+ETPD
Sbjct: 136  LSHGSEEYKLELSCENIWQIQLREPRGQNTKFLLIQLLDAPQIYEK-DVSALSYFKETPD 194

Query: 544  DQWIRTTDFTPSC-IGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRLETGVPFAANL 720
            DQW+R  DFTPSC IGQSS LCL+LP+G +LPNF ++F  YKE+   F LE+G  F+ NL
Sbjct: 195  DQWVREIDFTPSCSIGQSSALCLELPHGSQLPNFCENFARYKENDRKFILESGASFSGNL 254

Query: 721  ALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRFDIRYIEHALEK 900
             LVPIV PP+G  LP++ILFK+  LVQ GCL GP LDTNFFR VDP+R +I +IEHALEK
Sbjct: 255  HLVPIVGPPQGSNLPFKILFKINTLVQNGCLSGPTLDTNFFRWVDPQRINISFIEHALEK 314

Query: 901  LYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQITPTRVYFSGPEV 1080
            LYY++ECCY+PV WL+EQY  Y + ++   SPAISLD GLVYV RVQITP +VYF GPEV
Sbjct: 315  LYYLEECCYEPVRWLHEQYRTYIS-KQVAGSPAISLDTGLVYVRRVQITPCKVYFCGPEV 373

Query: 1081 NVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTKLYERILSTLKE 1260
            NVSNRVLR+Y + +DNFLRVSF+DE  +K++ST +SP+++  +E +RT +Y RILS L+ 
Sbjct: 374  NVSNRVLRNYPEDIDNFLRVSFLDENSEKIHSTVISPRMS--NEGRRTGVYRRILSILQN 431

Query: 1261 GIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDIRNVAKYAARLGQ 1440
            GI+IG+KKFDFLA SSSQLRDNS WMFA   GL A  IR  MGDF  IRNVAKYAARLGQ
Sbjct: 432  GIVIGDKKFDFLAVSSSQLRDNSAWMFASRPGLTAADIRSRMGDFSQIRNVAKYAARLGQ 491

Query: 1441 SFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRVAIKCGFKSATPS 1620
            SFSSS ETL V + E+E I DIE  R+GT YVFSDGIGKISA+ A RVAIKCG K++TPS
Sbjct: 492  SFSSSKETLKVAKHEIEIIPDIETHRDGTTYVFSDGIGKISAELAHRVAIKCGCKNSTPS 551

Query: 1621 AFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQPCFLNRQIITLL 1800
            AFQIRYGGYKGVVAVDP SS KLSLR SM KY+SENT LDVLSWSKY+PCFLNRQ+ITLL
Sbjct: 552  AFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESENTNLDVLSWSKYRPCFLNRQLITLL 611

Query: 1801 STLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKEMLKCGYKPDGE 1980
            STLGVKD+VF+ KQREAV QLD IL DPLRAQEAL+LMSPGEN+NILKEML CGYKPD E
Sbjct: 612  STLGVKDHVFEKKQREAVDQLDTILKDPLRAQEALELMSPGENTNILKEMLMCGYKPDAE 671

Query: 1981 PFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVFVQFSGAGRGGFY 2160
            PFLSMMLQTFR++KLL+LR K RIFVP  R MMGCLDET  LEYG+VFVQ SG G    +
Sbjct: 672  PFLSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQISGTGGRQSF 731

Query: 2161 EESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHHMVDCVVFPSRGM 2340
             +S M Y + S   N+++EG VVVAKNPCLHPGDVR+L A++V ALHHMVDCVVFP +GM
Sbjct: 732  GDSLMFYGSGSHHDNFILEGKVVVAKNPCLHPGDVRILSAVDVPALHHMVDCVVFPQKGM 791

Query: 2341 RPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDVTIEEVEEYFTNY 2520
            RPHP+ECSGSDLDGDIYFVCWD DLIPPRQ++PMDY+PAPT  LDHDV IEEVEEYFTNY
Sbjct: 792  RPHPDECSGSDLDGDIYFVCWDHDLIPPRQINPMDYTPAPTKVLDHDVMIEEVEEYFTNY 851

Query: 2521 IVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVPAEIPPHLRVKEY 2700
            I ND LGIIANAHTVFADKE + AL  PC ELA+LFSIA++FPKTGVPAEIP HL VKEY
Sbjct: 852  IGNDKLGIIANAHTVFADKEYDKALCPPCKELAKLFSIALEFPKTGVPAEIPFHLHVKEY 911

Query: 2701 PDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDMEVDGFNDYV 2880
            PDFM+K +K +YES  +IGKLFREVKD+APH   +RSFT++VA +SYD DMEVDGF DYV
Sbjct: 912  PDFMEKANKPTYESQSVIGKLFREVKDVAPHNYDVRSFTRDVAMQSYDADMEVDGFEDYV 971

Query: 2881 DEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAISAAVRSLRNE 3060
             +AF YK++YD KLG+LM+  GI+TE+EILSG IMKMSK+FD+RKD EAI+ AVRSLR E
Sbjct: 972  RDAFYYKSQYDFKLGSLMDCCGIRTESEILSGSIMKMSKSFDKRKDAEAIALAVRSLRKE 1031

Query: 3061 VRSWFKKGNE-----SDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYISFPWCVYDKLI 3225
             R+WF K        +DD YA ASAWYHVTYHP +WG YN G+  DH++SFPWCVYDKLI
Sbjct: 1032 ARTWFNKMGSGTYAGADDVYAIASAWYHVTYHPYYWGCYNEGMYHDHFLSFPWCVYDKLI 1091

Query: 3226 KIKKD 3240
            +IK+D
Sbjct: 1092 QIKRD 1096


>gb|EOY01384.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
            gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
            1 isoform 1 [Theobroma cacao] gi|508709489|gb|EOY01386.1|
            RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
            cacao]
          Length = 1109

 Score = 1476 bits (3821), Expect = 0.0
 Identities = 742/1116 (66%), Positives = 875/1116 (78%), Gaps = 15/1116 (1%)
 Frame = +1

Query: 1    ERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEIIMKLASASARLYFGSF 180
            E VK FLE  TG+ TV AL+++  K G R YA VQF     AE+I++L +   RLY+GS 
Sbjct: 17   EEVKTFLELYTGKETVYALKIRQQKNGGRAYAIVQFTKSTDAELIIRLTNQ--RLYYGSS 74

Query: 181  YLRAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMHF 360
            YL+A E   DI+  PRTF+H ME VTL+FGCQ S EKF VLW+   V+V FG GM+K+ F
Sbjct: 75   YLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEKFYVLWEEVDVTVNFGMGMRKLQF 134

Query: 361  VLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKK--------LNDSV 516
            +L H+ VEYRL L YENIWQI L+ P  QT+K LLIQLFGAPRIY+K          + +
Sbjct: 135  LLSHHCVEYRLDLFYENIWQIELHRPRNQTSKYLLIQLFGAPRIYEKDVRSSGLVFENPL 194

Query: 517  HSYFRETPDDQWIRTTDFTPS-CIGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRLE 693
             +YF + PDDQW+RTTDFT S CIGQSS LCL+LPY ++LPNF+++F +YKES+  F LE
Sbjct: 195  LNYFMDVPDDQWVRTTDFTQSSCIGQSSVLCLELPYYLQLPNFRENFAYYKESEGKFVLE 254

Query: 694  TGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRFDI 873
            +G  ++ NL LVPIV P  G++LPY ILFK+  LVQ GC+PGP LD NF+RLV+P R D 
Sbjct: 255  SGSSYSRNLNLVPIVGPSLGIDLPYEILFKINLLVQNGCIPGPALDANFYRLVNPCRIDK 314

Query: 874  RYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQITPT 1053
             YI+HALEKLYY+KECC++P  WL EQY+ Y   ++ P SP ISLDDGLV V RVQITP+
Sbjct: 315  VYIDHALEKLYYLKECCFEPSKWLLEQYKGYIASKKNPGSPVISLDDGLVNVRRVQITPS 374

Query: 1054 RVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTKLY 1233
            RVYF GPE+NVSNRVLRH+ D +DNFLR++FVDEE +K++STDL  +      N+ T++Y
Sbjct: 375  RVYFCGPEINVSNRVLRHFHDDIDNFLRITFVDEELEKIHSTDLLTR------NRITEIY 428

Query: 1234 ERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDIRNV 1413
             RILSTLK GI+IG+K+F+FLAFSSSQLR+NS WMFA   GL A  IR WMG+F  IRNV
Sbjct: 429  GRILSTLKNGIVIGDKQFEFLAFSSSQLRENSAWMFASREGLTAADIRTWMGEFSKIRNV 488

Query: 1414 AKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRVAIK 1593
            AKYAARLGQSFSSSTETLSV + E+E I D+E  R+G  YVFSDGIGKISA FA++VA K
Sbjct: 489  AKYAARLGQSFSSSTETLSVAKDEIEIIDDVEIKRDGINYVFSDGIGKISAKFAKKVAAK 548

Query: 1594 CGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQPCF 1773
            C     TPSAFQIR GG+KGVVAVDP SS KLSLR SM KY+SENTKLDVL+WSKYQPCF
Sbjct: 549  CRLNGRTPSAFQIRIGGFKGVVAVDPTSSKKLSLRGSMSKYESENTKLDVLAWSKYQPCF 608

Query: 1774 LNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKEML 1953
            LNRQ+ITLLSTLGV D+ F+ KQRE V QL+ IL DPL+AQEAL+LMSPGEN+NILKEML
Sbjct: 609  LNRQLITLLSTLGVPDHAFEEKQREVVDQLNAILTDPLKAQEALELMSPGENTNILKEML 668

Query: 1954 KCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVFVQF 2133
             CGY+PD EPFLSMMLQTFR+SKLL+LR K+RIFV   R MMGCLDET  L+YGQVFVQ 
Sbjct: 669  LCGYEPDAEPFLSMMLQTFRASKLLELRTKSRIFVANGRSMMGCLDETRTLDYGQVFVQV 728

Query: 2134 SGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHHMVD 2313
            SG+                 ++  ++V+G VVVAKNPCLHPGDVRVL A+NV  LHHMVD
Sbjct: 729  SGS----------------RSEQRFIVQGKVVVAKNPCLHPGDVRVLTAVNVPDLHHMVD 772

Query: 2314 CVVFPSRGMRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDVTIE 2493
            CVVFP +G RPHPNECSGSDLDGDIYFVCWD +LIP +Q+ PMDYSPAPT  L+H+VTIE
Sbjct: 773  CVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPELIPSKQIPPMDYSPAPTKPLEHEVTIE 832

Query: 2494 EVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVPAEI 2673
            EVEEYFTNYIVNDSLGIIANAHTVFAD+E   A+S  C  LA+LFSIAVDFPKTGVPAEI
Sbjct: 833  EVEEYFTNYIVNDSLGIIANAHTVFADREPRKAMSSECKWLAKLFSIAVDFPKTGVPAEI 892

Query: 2674 PPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDM 2853
            P  LRVKEYPDFM+KPDK +Y+S  +IGKLFREVKD+AP+   IRS T+E   R YDPDM
Sbjct: 893  PQELRVKEYPDFMEKPDKPTYQSYNVIGKLFREVKDLAPNECFIRSLTRERLERFYDPDM 952

Query: 2854 EVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAIS 3033
            EVDG+ DYVD+AF +K+ YD KLGNLMEYYGIKTEAEILSGGIMKMS++F +++D EAI 
Sbjct: 953  EVDGYEDYVDDAFYHKSNYDYKLGNLMEYYGIKTEAEILSGGIMKMSRSFTKQRDAEAIG 1012

Query: 3034 AAVRSLRNEVRSWF-KKGN----ESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYISF 3198
             AVRSLR E RSWF +KGN    E+DD YAKASAWYHVTYHP +WG YN G+ R+H++SF
Sbjct: 1013 VAVRSLRKEARSWFNEKGNGLDSEADDLYAKASAWYHVTYHPSYWGLYNEGMNRNHFLSF 1072

Query: 3199 PWCVYDKLIKIKKD-NSRRASDMASLEREFSRRLNL 3303
            PWCVYDKLI IKK   SRR S ++SLE  F+R L L
Sbjct: 1073 PWCVYDKLILIKKKVTSRRNSRLSSLESLFARGLRL 1108


>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1065

 Score = 1473 bits (3814), Expect = 0.0
 Identities = 729/1058 (68%), Positives = 861/1058 (81%), Gaps = 3/1058 (0%)
 Frame = +1

Query: 1    ERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEIIMKLASASARLYFGSF 180
            E VK FLE+ TG GTV AL+VK SK G R +A+VQF++   A+ I+ LAS   RLYFGS 
Sbjct: 17   EVVKSFLEKHTGYGTVCALDVKQSKGGSRAFAKVQFVDNISADKIINLASK--RLYFGSS 74

Query: 181  YLRAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMHF 360
            YL+AWE   DI+Q    +V  M+ +TLNFGCQ S +KF+VL   E VS+KFG G+KK++F
Sbjct: 75   YLKAWEMKTDIVQV--AYVDHMDGITLNFGCQISDDKFAVLGSTE-VSIKFGIGLKKIYF 131

Query: 361  VLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKKLNDSVHSYFRETP 540
             L   S +Y+LQLSYENIWQ+VL+ P+GQ A+ LLIQLFGAPRIYK+L +S +S+F+ETP
Sbjct: 132  FLSRGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETP 191

Query: 541  DDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRLETGVPF--AA 714
            DDQW+RTTDF PS IG SS LCLQ   G+ LPNFQ+SF  Y E ++   L+TG  F  + 
Sbjct: 192  DDQWVRTTDFAPSWIGLSSSLCLQFRRGVHLPNFQESFFHYAERENNITLQTGFTFFISQ 251

Query: 715  NLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRFDIRYIEHAL 894
              ALVP V PP G+ +PY+ILFK+  LVQ GC+PGP L+  FFRLVDP+R ++  IE AL
Sbjct: 252  KSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPSLNVYFFRLVDPQRRNVACIEQAL 311

Query: 895  EKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQITPTRVYFSGP 1074
            EKLYY+KECCYDPV WL EQY+ Y   R+ P SP+I+LDDGLVYV RV +TP +VYF GP
Sbjct: 312  EKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGP 371

Query: 1075 EVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTKLYERILSTL 1254
            EVNVSNRVLR+Y + +DNFLRVSFVDEEW+K+YST+L PK + G+   RT +YERILST+
Sbjct: 372  EVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTELLPKASTGN-GIRTNIYERILSTM 430

Query: 1255 KEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDIRNVAKYAARL 1434
            ++G +IG+KKF+FLAFSSSQLRDNS+WMFA   GL A+ IR WMGDF  I+NVAKYAARL
Sbjct: 431  QKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFSQIKNVAKYAARL 490

Query: 1435 GQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRVAIKCGFKSAT 1614
            GQSF SS ETLSV   E+E I D++   +GT YVFSDGIGKISADFARRVA KCG +  T
Sbjct: 491  GQSFGSSKETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISADFARRVASKCGLQY-T 547

Query: 1615 PSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQPCFLNRQIIT 1794
            PSAFQIRYGGYKGVVAVDP SS+KLSLR SM KY+S+N KLDVL WSKYQPC+LNRQ+IT
Sbjct: 548  PSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLIT 607

Query: 1795 LLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKEMLKCGYKPD 1974
            LLSTLGVKD + + KQ+EAV QLD IL D L+AQEAL+LMSPGEN+NILK ML CGY PD
Sbjct: 608  LLSTLGVKDDILEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPD 667

Query: 1975 GEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVFVQFSGAGRGG 2154
             EPFLSMMLQTFR+SKLLDLR K+RIF+P  R MMGCLDE+  LEYGQVFVQF+GAG   
Sbjct: 668  AEPFLSMMLQTFRASKLLDLRTKSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHRE 727

Query: 2155 FYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHHMVDCVVFPSR 2334
            F E+ +   ++ ST+CN++++GNVVVAKNPCLHPGD+RVL+A++V ALHHMVDCVVFP +
Sbjct: 728  FSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQK 787

Query: 2335 GMRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDVTIEEVEEYFT 2514
            G RPHPNECSGSDLDGDIYFVCWD D+IPPRQV PM+Y PAP+ +LDHDVTIEEVEEYFT
Sbjct: 788  GKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFT 847

Query: 2515 NYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVPAEIPPHLRVK 2694
            NYIVNDSLGII+NAH VFAD+E +MA+S+PC +LA L SIAVDFPKTGVPAEIP   R K
Sbjct: 848  NYIVNDSLGIISNAHVVFADREPDMAMSDPCKKLAELCSIAVDFPKTGVPAEIPSQWRPK 907

Query: 2695 EYPDFMDK-PDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDMEVDGFN 2871
            EYPDFMDK PDK +Y S R+IGKL+R+VKD AP  +S   FT++VARRSYD D+EVDGF 
Sbjct: 908  EYPDFMDKPPDKTTYISERVIGKLYRKVKDKAPQASSTAIFTRDVARRSYDADLEVDGFE 967

Query: 2872 DYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAISAAVRSL 3051
            DY+DEAF+YKTEYDNKLGNLM+YYGIKTEAEILSGGIMK SKTFDRRKD EAIS AVR+L
Sbjct: 968  DYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRAL 1027

Query: 3052 RNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYN 3165
            R E R+WFK+ N+ DD   KASAWYHVTYHP +WG YN
Sbjct: 1028 RKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYN 1065


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score = 1461 bits (3781), Expect = 0.0
 Identities = 721/1115 (64%), Positives = 885/1115 (79%), Gaps = 16/1115 (1%)
 Frame = +1

Query: 7    VKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEIIMKLASASARLYFGSFYL 186
            VK FLE  TG+ TV AL+++  K+  R +A VQF     A +I++LA+   RLY+G  YL
Sbjct: 19   VKTFLEGYTGRETVYALKIRQHKKSGRAFAIVQFTRSSDAGLIIRLANQ--RLYYGRSYL 76

Query: 187  RAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMHFVL 366
            +A E   DI+  PR F+H ME+VT+NFGCQ S EKF VLWKA++V++ FGTGM+K+ F+L
Sbjct: 77   KAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVLWKADNVTLNFGTGMRKLEFLL 136

Query: 367  CHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKK--------LNDSVHS 522
             + S +Y+L+L YENIWQI L  PH QT+K LLIQLFGAPRIY+K         +D + +
Sbjct: 137  SYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPRIYEKEVPASECVFDDPLLN 196

Query: 523  YFRETPDDQWIRTTDFTPS-CIGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRLETG 699
            YF++ PDDQW+RTTDFT S CIGQSS L L+LP+ ++LPNF+++F +YKE++    LE+G
Sbjct: 197  YFKDMPDDQWVRTTDFTRSNCIGQSSVLWLELPHNLQLPNFRENFAYYKENEGRLVLESG 256

Query: 700  VPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRFDIRY 879
              ++ NL+LVPIV P R ++LP+ ILFKV  LVQ GC+PGP LD  F+RLVDP R    Y
Sbjct: 257  SSYSCNLSLVPIVCPSRVIDLPFEILFKVNLLVQNGCIPGPALDDTFYRLVDPCRMHKVY 316

Query: 880  IEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQITPTRV 1059
            I+HALEKLYY++ECCY+P  WL E+Y+ +   R+   SP ISLD+GLVYV RVQITP+RV
Sbjct: 317  IDHALEKLYYLRECCYEPSRWLFEEYKNFSRSRKYQGSPTISLDEGLVYVRRVQITPSRV 376

Query: 1060 YFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTKLYER 1239
            YF GPE+NVSNRVLR + + +DNFLR+SFVDEE +K++ST++  +       +RT +Y+R
Sbjct: 377  YFCGPEINVSNRVLRQFHNDIDNFLRISFVDEELEKIHSTNVQAR------GRRTGIYKR 430

Query: 1240 ILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDIRNVAK 1419
            ILSTL+ GI+IGNK+F+FLAFSSSQLR+NS WMFA   GL A  IR WMG+F  IRNVAK
Sbjct: 431  ILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGLTAADIRSWMGNFSKIRNVAK 490

Query: 1420 YAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRVAIKCG 1599
            YAARLGQSFSSSTETLSV + E+  I DIE +++G KYVFSDGIGKISA+FA++VA KC 
Sbjct: 491  YAARLGQSFSSSTETLSVSKDEINLIPDIEIMKDGIKYVFSDGIGKISAEFAKKVAAKCR 550

Query: 1600 FKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQPCFLN 1779
             K  TPSAFQIR GG+KGVVA+DP SS KLSLR SM KY+SENTKLDVL+WSKYQPCFLN
Sbjct: 551  LKGCTPSAFQIRIGGFKGVVAIDPTSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCFLN 610

Query: 1780 RQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKEMLKC 1959
            RQ+ITLLSTLGV D  F+ KQRE V QL+ +L DPL AQEAL+LMSPGEN+NILKEML C
Sbjct: 611  RQLITLLSTLGVPDRAFEKKQREVVDQLNALLTDPLEAQEALELMSPGENTNILKEMLLC 670

Query: 1960 GYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVFVQFSG 2139
            GYKPD EPFLSMML+TFR+SKLL+LR KARIFV + R MMGCLDET  L YGQVFVQFSG
Sbjct: 671  GYKPDAEPFLSMMLETFRASKLLELRTKARIFVQKGRSMMGCLDETRTLNYGQVFVQFSG 730

Query: 2140 AGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHHMVDCV 2319
            +                 ++  ++V+G V+VAKNPCLHPGDVRVL+A+NV  LHHMVDCV
Sbjct: 731  S----------------RSERRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHMVDCV 774

Query: 2320 VFPSRGMRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDVTIEEV 2499
            VFP +G RPHPNECSGSDLDGD+YFVCWD +LIP +Q+ PMDYSPA T++LDH+VTIEE+
Sbjct: 775  VFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEEI 834

Query: 2500 EEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVPAEIPP 2679
            EEYFTNYIVNDSLGII+NAHT FAD+E + A+S PCLELA+LFSIAVDFPKTGVPAEIP 
Sbjct: 835  EEYFTNYIVNDSLGIISNAHTAFADREPDKAMSRPCLELAKLFSIAVDFPKTGVPAEIPQ 894

Query: 2680 HLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDMEV 2859
             LRVKEYPDFM+KPDK SY+S  +IGKLFREVK++AP+  SI+  T+E  +R YDPDMEV
Sbjct: 895  ELRVKEYPDFMEKPDKPSYQSHNVIGKLFREVKNLAPNECSIKFLTREKMQRFYDPDMEV 954

Query: 2860 DGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAISAA 3039
            +GF DY+D+AF +K++YD KLGNLM+YYG+KTEAEIL GGIMKMS++F +++D EAIS A
Sbjct: 955  EGFEDYIDDAFFHKSKYDYKLGNLMDYYGVKTEAEILGGGIMKMSRSFTKKRDAEAISMA 1014

Query: 3040 VRSLRNEVRSWF-KKGN----ESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYISFPW 3204
            VRSLR E RSWF +KG+    E DD YAKASAWY+VTYHP +WG YN G+ RDH++SFPW
Sbjct: 1015 VRSLRKEARSWFNEKGSELDEEIDDAYAKASAWYYVTYHPSYWGQYNEGMNRDHFLSFPW 1074

Query: 3205 CVYDKLIKIKKDNS--RRASDMASLEREFSRRLNL 3303
            CVYDKLI+IKK+ +  R A D++SLE  F R L+L
Sbjct: 1075 CVYDKLIQIKKEKAAVREALDLSSLEHRFQRGLHL 1109


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score = 1456 bits (3770), Expect = 0.0
 Identities = 718/1115 (64%), Positives = 882/1115 (79%), Gaps = 16/1115 (1%)
 Frame = +1

Query: 7    VKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEIIMKLASASARLYFGSFYL 186
            VK FLE  TG+ TV AL+++  K+  R +A VQF     A +I++LA+   RLY+G  YL
Sbjct: 19   VKTFLEGYTGRETVYALKIRQHKKSGRAFAIVQFTRSSDAGLIIRLANQ--RLYYGRSYL 76

Query: 187  RAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMHFVL 366
            +A E   DI+  PR F+H ME+VT+NF C  S EKF VLWKA++V++ FGTGM+K+ F+L
Sbjct: 77   KAREMETDIVPKPRVFLHTMERVTVNFDCHVSEEKFYVLWKADNVTLNFGTGMRKLEFLL 136

Query: 367  CHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKK--------LNDSVHS 522
             + S +Y+L+L YENIWQI L  PH QT+K LLIQLFGAPRIY+K         +D + +
Sbjct: 137  SYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQLFGAPRIYEKEVPASECVFDDPLLN 196

Query: 523  YFRETPDDQWIRTTDFTPS-CIGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRLETG 699
            YF++ PDDQW+RTTDFT S CIGQSS LCL+LP+ ++LPNF+++F +YKE++    LE+G
Sbjct: 197  YFKDMPDDQWVRTTDFTRSNCIGQSSVLCLELPHNLQLPNFRENFAYYKENEGRLVLESG 256

Query: 700  VPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRFDIRY 879
              ++ NL+LVPIV P R ++LP+ ILFKV  LVQ GC+PGP LD  F+RLVDP R    Y
Sbjct: 257  SSYSCNLSLVPIVCPSRVIDLPFEILFKVNLLVQNGCIPGPALDDTFYRLVDPCRMHKVY 316

Query: 880  IEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQITPTRV 1059
            I+HALEKLYY++ECCY+P  WL E+Y+ +   R+   SP ISLD+GLVYV RVQITP+RV
Sbjct: 317  IDHALEKLYYLRECCYEPSRWLFEEYKNFSRSRKYQGSPTISLDEGLVYVRRVQITPSRV 376

Query: 1060 YFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTKLYER 1239
            YF GPE+NVSNRVLR + + +DNFLR+SFVDEE +K++ST++  +       +RT +Y+R
Sbjct: 377  YFCGPEINVSNRVLRQFHNDIDNFLRISFVDEELEKIHSTNVQAR------GRRTGIYKR 430

Query: 1240 ILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDIRNVAK 1419
            ILSTL+ GI+IGNK+F+FLAFSSSQLR+NS WMFA   GL A  IR WMG+F  IRNVAK
Sbjct: 431  ILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGLTAADIRSWMGNFSKIRNVAK 490

Query: 1420 YAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRVAIKCG 1599
            YAARLGQSFSSSTETLSV + E+  I DIE +++G KYVF DGIGKISA+FA++VA KC 
Sbjct: 491  YAARLGQSFSSSTETLSVSKDEINLIPDIEIMKDGIKYVFPDGIGKISAEFAKKVAAKCR 550

Query: 1600 FKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQPCFLN 1779
             K  TPSAFQIR GG+KGVVA+DP SS KLSLR SM KY+SENTKLDVL+WSKYQPCFLN
Sbjct: 551  LKGCTPSAFQIRIGGFKGVVAIDPTSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCFLN 610

Query: 1780 RQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKEMLKC 1959
            RQ+ITLLSTLGV DY F+ KQRE V QL+ +L DPL AQEAL+LMSPGEN+NILKEML C
Sbjct: 611  RQLITLLSTLGVPDYAFEKKQREVVDQLNALLTDPLEAQEALELMSPGENTNILKEMLLC 670

Query: 1960 GYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVFVQFSG 2139
            GYKPD EPFLSMML+TFR+SKLL+LR KARIFV + R MMGCLDET  L YGQVFVQFSG
Sbjct: 671  GYKPDAEPFLSMMLETFRASKLLELRTKARIFVQKGRSMMGCLDETRTLNYGQVFVQFSG 730

Query: 2140 AGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHHMVDCV 2319
            +                 ++  ++V+G V+VAKNPCLHPGDVRVL+A+NV  LHHMVDCV
Sbjct: 731  S----------------RSERRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHMVDCV 774

Query: 2320 VFPSRGMRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDVTIEEV 2499
            VFP +G RPHPNECSGSDLDGD+YFVCWD +LIP +Q+ PMDYSPA T++LDH+VTIEE+
Sbjct: 775  VFPQKGTRPHPNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEEI 834

Query: 2500 EEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVPAEIPP 2679
            EEYFTNYIVNDSLGII+NAHT FAD+E   A+S PCLELA+LFSIAVDFPKTGVPAEIP 
Sbjct: 835  EEYFTNYIVNDSLGIISNAHTAFADREPGKAMSRPCLELAKLFSIAVDFPKTGVPAEIPQ 894

Query: 2680 HLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDMEV 2859
             LRVKE+PDFM+KPDK SY+S  +IGKLFREVK++AP+  SI+  T+E  +R YDPDMEV
Sbjct: 895  ELRVKEFPDFMEKPDKPSYQSYNVIGKLFREVKNLAPNECSIKLLTREKMKRFYDPDMEV 954

Query: 2860 DGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAISAA 3039
            +GF DY+D+AF YK++YD KLGNLM+YYG+KTEAEILSGGIMKMS++F +++D E+IS A
Sbjct: 955  EGFVDYIDDAFFYKSKYDYKLGNLMDYYGVKTEAEILSGGIMKMSRSFTKKRDAESISMA 1014

Query: 3040 VRSLRNEVRSWF-KKGN----ESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYISFPW 3204
            VRSLR E RSWF +KG+    E DD YAKASAWY+VTYH  +WG YN G+ RDH++SFPW
Sbjct: 1015 VRSLRKEARSWFNEKGSELDEEIDDAYAKASAWYYVTYHHSYWGQYNEGMNRDHFLSFPW 1074

Query: 3205 CVYDKLIKIKKDNS--RRASDMASLEREFSRRLNL 3303
            CVYDKLI+IKK+ +  R A D++SLE  F R  +L
Sbjct: 1075 CVYDKLIQIKKEKAALREALDLSSLEHRFQRGFHL 1109


>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score = 1454 bits (3763), Expect = 0.0
 Identities = 725/1119 (64%), Positives = 880/1119 (78%), Gaps = 18/1119 (1%)
 Frame = +1

Query: 1    ERVKRFLEQITGQGTVIALEVKPSKRG-PRPYARVQFMNIRCAEIIMKLASASARLYFGS 177
            E VK FLE  TG+GTV A++++P+K G  R YA VQFM +  AE+I++LA+   RL++G 
Sbjct: 17   ESVKEFLEGHTGRGTVYAIKIRPTKNGGSRSYAIVQFMTVETAELIIRLANP--RLWYGR 74

Query: 178  FYLRAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMH 357
             YL A     DI+  PR  ++ ++ VTL+FGCQ S+EKFS LW+  +VSV FG G+++++
Sbjct: 75   SYLLARVMERDIVPKPRATLYSLQNVTLHFGCQISKEKFSFLWRVGNVSVDFGLGLRRLN 134

Query: 358  FVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKK--------LNDS 513
            F L +  VEYRLQL YEN+WQI L+ P GQTAK LLIQL GAPR+Y+K        L + 
Sbjct: 135  FYLTYGPVEYRLQLLYENVWQIELHRPRGQTAKYLLIQLLGAPRVYEKEVRISFDILENP 194

Query: 514  VHSYFRETPDDQWIRTTDFTPSC-IGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRL 690
            + +YF++TPDDQW+R TDFT SC IG SS L L+LPYG+ LP+ +++FV+YKES++ F L
Sbjct: 195  LFNYFKDTPDDQWVRATDFTESCCIGHSSALYLELPYGVDLPDLRENFVYYKESEERFIL 254

Query: 691  ETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRF- 867
            E+G  F+ NL LVPIV PP G+ LP+  +FK+  L+Q GCL GP LD +F+RLVDP+R  
Sbjct: 255  ESGSSFSRNLDLVPIVGPPSGINLPFETVFKINMLLQNGCLSGPTLDVDFYRLVDPQRIR 314

Query: 868  DIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQIT 1047
            ++  I +ALEKL+ +KEC Y+P AWLNEQY KY T    P  PAI+LD GLVYV RVQ+T
Sbjct: 315  NVDCINYALEKLFNLKECPYEPAAWLNEQYRKYLTAPRPPKPPAIALDSGLVYVRRVQVT 374

Query: 1048 PTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTK 1227
            P++VYF GPE+NVSNRVLR Y D++D FLRVSFVDEE +K++STDLSP+ +  +E++RT 
Sbjct: 375  PSKVYFCGPEINVSNRVLREYIDYIDYFLRVSFVDEELEKLFSTDLSPRTSNANEDRRTG 434

Query: 1228 LYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDIR 1407
            +Y RILS L+ GI IG++KF+FLAFSSSQLRDNSLWMFA  +G  AD+IR+W+GDFR IR
Sbjct: 435  IYRRILSVLRNGIEIGDRKFEFLAFSSSQLRDNSLWMFAAVDGHSADTIRQWIGDFRSIR 494

Query: 1408 NVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRVA 1587
            NVAKYAARLGQSF SSTETL+V E E E I DIE  R   KYVFSDGIGKIS+ FA+RVA
Sbjct: 495  NVAKYAARLGQSFGSSTETLTVDESETEVISDIEIERGAVKYVFSDGIGKISSTFAKRVA 554

Query: 1588 IKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQP 1767
             KCG K   PSAFQIRY GYKGVVAVDP SS KLSLR SM KY+SE  KLDVL++SK Q 
Sbjct: 555  KKCGLKDCVPSAFQIRYCGYKGVVAVDPTSSTKLSLRKSMWKYESELHKLDVLAYSKLQH 614

Query: 1768 CFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKE 1947
            C+LNRQ+ITLLSTLGV D VF+ KQREAV QL+ IL DPLRA+EALDLMS GE +NILKE
Sbjct: 615  CYLNRQLITLLSTLGVGDRVFEKKQREAVQQLNAILNDPLRAREALDLMSAGETTNILKE 674

Query: 1948 MLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVFV 2127
            +L CGY+P+ EPFLSMMLQ FR+SKL +LR K RI +P  R MMGCLDE   LEYG+VFV
Sbjct: 675  LLSCGYQPNAEPFLSMMLQAFRASKLQELRTKTRISIPDGRAMMGCLDEMRTLEYGEVFV 734

Query: 2128 QFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHHM 2307
            QFSG     F+E+S M      +  NY+V G VVVAKNPCLHPGDVRVL+A+NV ALHHM
Sbjct: 735  QFSGITHRPFFEDSFM-LGGTGSGQNYIVVGRVVVAKNPCLHPGDVRVLRAVNVPALHHM 793

Query: 2308 VDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDVT 2487
            VDCVVFP +G RPHPNECSGSDLDGDIYFVCWD +LIP +Q  PMDYSPAPT+RLDHDV 
Sbjct: 794  VDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDDELIPQKQFEPMDYSPAPTTRLDHDVR 853

Query: 2488 IEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVPA 2667
            IEEV+EYFTNYIVNDSLGIIANAHT FADKE + A+S  C+ELARLFSIAVDFPKTGVPA
Sbjct: 854  IEEVQEYFTNYIVNDSLGIIANAHTAFADKEPSKAMSPSCIELARLFSIAVDFPKTGVPA 913

Query: 2668 EIPPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYDP 2847
             IP  L VKEYPDFM+K +K +YES  +IGKLFREVKDIAP+  S+  FTKEVA RSYDP
Sbjct: 914  VIPQELYVKEYPDFMEKLNKPTYESQNVIGKLFREVKDIAPNVGSLHFFTKEVASRSYDP 973

Query: 2848 DMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEA 3027
            DME DGF DY+D+AF YK+ YD KLGNL++YYGIK+EAEI+ G IM+MSK+F +R+D E+
Sbjct: 974  DMEYDGFEDYIDDAFYYKSNYDYKLGNLLDYYGIKSEAEIIGGSIMRMSKSFTKRRDAES 1033

Query: 3028 ISAAVRSLRNEVRSWF-KKGNE----SDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYI 3192
            I+ AVR+LR E R+WF +KG+     +DD YAKASAWY+VTYH  +WG YN G+ RDHY+
Sbjct: 1034 INMAVRALRKEARTWFNEKGSSLDSAADDVYAKASAWYYVTYHHSYWGCYNEGMNRDHYL 1093

Query: 3193 SFPWCVYDKLIKIKKDNS--RRASDMASLEREFSRRLNL 3303
            SFPWCVYDKL++IK+  +  RR+  M+SLER F RRL+L
Sbjct: 1094 SFPWCVYDKLVQIKRSKASVRRSLQMSSLERAFDRRLHL 1132


>gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solanum demissum]
          Length = 1137

 Score = 1432 bits (3708), Expect = 0.0
 Identities = 723/1107 (65%), Positives = 857/1107 (77%), Gaps = 5/1107 (0%)
 Frame = +1

Query: 1    ERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEIIMKLASASARLYFGSF 180
            E VK FLE+ TG GTV ALEVK SK G R +A+VQF++   A+ I+ LAS   RLYFGS 
Sbjct: 87   EVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADKIINLASK--RLYFGSS 144

Query: 181  YLRAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMHF 360
            YL+AWE   DI+Q    +V  M+ +TLNFGCQ S +KF+VL   E               
Sbjct: 145  YLKAWELETDIVQL-WAYVDHMDGITLNFGCQISDDKFAVLGSTE--------------- 188

Query: 361  VLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKKLNDSVHSYFRETP 540
                                +VL+ P+GQ A+ LLIQLFGAPRIYK+L +S +S+F+ETP
Sbjct: 189  --------------------VVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETP 228

Query: 541  DDQWIRTTDFTPSCIGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRLETGVPF--AA 714
            DDQW+RTTDFTPS IG SS LCLQ   G+ LPNFQ+SF  Y E ++   L+TG  F  + 
Sbjct: 229  DDQWVRTTDFTPSWIGLSSSLCLQFRRGVHLPNFQESFFHYAERENNITLQTGFTFFVSQ 288

Query: 715  NLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRFDIRYIEHAL 894
              ALVP V PP G+ +PY+ILFK+  LVQ GC+PGP L+  FFRLVDP+R ++  IE AL
Sbjct: 289  KSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNVYFFRLVDPQRRNVACIEQAL 348

Query: 895  EKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQITPTRVYFSGP 1074
            EKLYY+KECCYDPV WL EQY+ Y   R+ P SP+I+LDDGLVYV RV +TP +VYF GP
Sbjct: 349  EKLYYLKECCYDPVRWLTEQYDGYFKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGP 408

Query: 1075 EVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTKLYERILSTL 1254
            EVNVSNRVLR+Y + +DNFLRVSFVDEEW+K+YST+L PK + G+   RT +YERILSTL
Sbjct: 409  EVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTELLPKASTGN-GIRTNIYERILSTL 467

Query: 1255 KEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDIRNVAKYAARL 1434
            ++G +IG+KKF+FLAFSSSQLRDNS+WMFA   GL A+ IR WMGDF  I+NVAKYAAR 
Sbjct: 468  RKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRRGLTANDIRSWMGDFSQIKNVAKYAARF 527

Query: 1435 GQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRVAIKCGFKSAT 1614
            GQSF SS ETLSV   E+E I D++   +GT YVFSDGIGKISADFAR+VA  CG +  T
Sbjct: 528  GQSFGSSRETLSVLRHEIEVIPDVKV--HGTSYVFSDGIGKISADFARKVASNCGLQY-T 584

Query: 1615 PSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQPCFLNRQIIT 1794
            PSAFQIRYGGYKGVVAVDP SS+KLSLR SM KY+S+N KLDVL WSKYQPC+LNRQ++T
Sbjct: 585  PSAFQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLEWSKYQPCYLNRQLVT 644

Query: 1795 LLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKEMLKCGYKPD 1974
            LLSTLGVKD V + KQ+EAV QLD IL D L+AQEAL+LMSPGEN+NILK ML CGY PD
Sbjct: 645  LLSTLGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPD 704

Query: 1975 GEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVFVQFSGAGRGG 2154
             EPFLSMMLQTFR+SKLLDLR K+RIF+P  R MMGCLDE+  LEYGQVFVQF+GAG   
Sbjct: 705  AEPFLSMMLQTFRASKLLDLRTKSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHRE 764

Query: 2155 FYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHHMVDCVVFPSR 2334
            F E+ +   ++ ST+CN++++GNVVVAKNPCLHPGD+RVL+A++V ALHHMVDCVVFP +
Sbjct: 765  FSEDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQK 824

Query: 2335 GMRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDVTIEEVEEYFT 2514
            G RPHPNECSGSDLDGDIYFVCWD D+IPPRQV  M++ P P+ +LDHDVTIEEVEEYFT
Sbjct: 825  GKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEFPPPPSIQLDHDVTIEEVEEYFT 884

Query: 2515 NYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVPAEIPPHLRVK 2694
            NYIVND LGIIANAH VFAD+E +MA+              +DFPKTGVPAEIP  LR K
Sbjct: 885  NYIVNDGLGIIANAHVVFADREPDMAM--------------MDFPKTGVPAEIPSQLRPK 930

Query: 2695 EYPDFMDK-PDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDMEVDGFN 2871
            EYPDFMDK PDK +Y S R+IGKLFR+VKD AP  +SI  FT++ ARRSYD D+EVDGF 
Sbjct: 931  EYPDFMDKPPDKTTYISERVIGKLFRKVKDKAPQASSIAIFTRDDARRSYDTDLEVDGFE 990

Query: 2872 DYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAISAAVRSL 3051
            DY+DEAF+YKTEYDNKLGNLM+YYGIKTEAEILSGGIMK SKTFDRRKD EAIS AVR+L
Sbjct: 991  DYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRAL 1050

Query: 3052 RNEVRSWFKKGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYISFPWCVYDKLIKI 3231
            R E R+WFK+ N+ DD   KASAWYHVTYHP +WG YN GLKRDH+ISFPWCVYD+LI+I
Sbjct: 1051 RKEARTWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQI 1110

Query: 3232 KKDNSRR--ASDMASLEREFSRRLNLR 3306
            KK+ +R     +++SL  + SR+L L+
Sbjct: 1111 KKEKARNRPVLNLSSLRDQLSRKLVLK 1137


>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca subsp.
            vesca]
          Length = 1119

 Score = 1410 bits (3651), Expect = 0.0
 Identities = 708/1105 (64%), Positives = 862/1105 (78%), Gaps = 13/1105 (1%)
 Frame = +1

Query: 1    ERVKRFLEQITGQGTVIALEVKPSKRGPRPYARVQFMNIRCAEIIMKLASASARLYFGSF 180
            E +K FLE+ TG+G+V AL+++P+K G R YA +QF +I  AE I+ LA+A  RL++G  
Sbjct: 17   ENIKEFLEKHTGEGSVFALKLRPAKSGGRFYAIIQFQSISQAEKIISLANA--RLWYGRS 74

Query: 181  YLRAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMHF 360
            YL A  +  DI+  PRTF+H +  + L+ GCQ +++KFSVLW    VSV FG GM+ + F
Sbjct: 75   YLNARPAH-DIVPKPRTFLHSLRDLVLHVGCQVAKDKFSVLWGTAEVSVDFGFGMRNLQF 133

Query: 361  VLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKKLNDSVH------- 519
             L +    YRLQLSYENIWQI L++  G++AK L+IQL+G PRIY++   S         
Sbjct: 134  RLLYRQKVYRLQLSYENIWQIELHHQRGRSAKYLVIQLYGNPRIYQQEVCSSGGNGYEDM 193

Query: 520  SYFRETPDDQWIRTTDFTP-SCIGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRLET 696
            +YFR+ PDD W+RTTDFTP SCIGQSS LCL L     LP+F+++F +YK++   F LE 
Sbjct: 194  NYFRD-PDD-WVRTTDFTPGSCIGQSSSLCLVLTSDGELPDFEENFAYYKKTDGQFILEN 251

Query: 697  GVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRFDIR 876
            G  F+ N  LVPIV  P G++LPY ILFK+  LVQ GCL GP LD NF+RLVDP+R    
Sbjct: 252  GSTFSRNRDLVPIVGSPAGIDLPYDILFKINLLVQQGCLSGPTLDNNFYRLVDPRRISRP 311

Query: 877  YIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQITPTR 1056
             IE AL+KL  +KE CY+P  WLNE+Y KY   ++ P    ISLD GLVYV RVQITP++
Sbjct: 312  CIEFALDKLSNLKESCYEPAVWLNEEYRKYMMSKKPPKPALISLDSGLVYVRRVQITPSK 371

Query: 1057 VYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTKLYE 1236
            VYFSGPEVNVSNR+LR Y   +DNFLRVSFVDEE +K+YSTDLSP+ +     ++T++Y 
Sbjct: 372  VYFSGPEVNVSNRILRQYSSDIDNFLRVSFVDEEMEKLYSTDLSPRTST----RKTRIYN 427

Query: 1237 RILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDIRNVA 1416
            R+LS L++GI++G KKF+FLAFSSSQLR+NSLWMFAPT+   AD+IR  MGDFR IRNVA
Sbjct: 428  RVLSVLRDGIVVGKKKFEFLAFSSSQLRENSLWMFAPTDEDSADTIRAGMGDFRQIRNVA 487

Query: 1417 KYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRVAIKC 1596
            KYAARLGQSF SSTETLSVG  E+E I D+     G KYVFSDGIGKISADFA RVA KC
Sbjct: 488  KYAARLGQSFGSSTETLSVGRNEMEVIPDVTVNSCGIKYVFSDGIGKISADFAERVAKKC 547

Query: 1597 GFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQPCFL 1776
            G+K+ TPSAFQIRYGGYKGVVAVDP SS+KLSLR SM KY+SENTKLDVL+ SKYQPCFL
Sbjct: 548  GYKAFTPSAFQIRYGGYKGVVAVDPTSSMKLSLRKSMSKYESENTKLDVLACSKYQPCFL 607

Query: 1777 NRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKEMLK 1956
            NRQ+ITLLSTL V+D+VF  KQR AV QL+ IL DPL+A+EALDLMS GE++N+LKE+L 
Sbjct: 608  NRQLITLLSTLEVQDHVFLKKQRAAVQQLNAILTDPLKAEEALDLMSAGESTNVLKELLM 667

Query: 1957 CGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVFVQFS 2136
            CGYKP+ EPFLSMMLQTFR+SKLL+LR K RIF+P  R MMGCLDET  LEYGQVFVQFS
Sbjct: 668  CGYKPNVEPFLSMMLQTFRASKLLELRTKTRIFIPDGRAMMGCLDETRTLEYGQVFVQFS 727

Query: 2137 GAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHHMVDC 2316
            G  R   +++  ++    S D  +++EG VVVAKNPCLHPGDVRVL+A+NV  LHHMVDC
Sbjct: 728  GKRRRQLFDDICIHS---SLDSCFIIEGKVVVAKNPCLHPGDVRVLRAVNVPDLHHMVDC 784

Query: 2317 VVFPSRGMRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDVTIEE 2496
            VVFP +G RPHPNECSGSDLDGDIYFVCWD +LIPP+Q+ PMDY+PAP   +D DVTIEE
Sbjct: 785  VVFPQKGHRPHPNECSGSDLDGDIYFVCWDPELIPPKQIQPMDYTPAPPIEMDQDVTIEE 844

Query: 2497 VEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVPAEIP 2676
            VEEYF NYIVNDSLGIIANAHTVFAD + + A+S PCL+LA+LFSIAVDFPKTGVPAEIP
Sbjct: 845  VEEYFVNYIVNDSLGIIANAHTVFADSKLDKAMSHPCLQLAKLFSIAVDFPKTGVPAEIP 904

Query: 2677 PHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYDPDME 2856
            P L  KEYPDFM+KPDK +Y S  +IG+LFREVKDIAPH +SI SFT++VA + YDPDME
Sbjct: 905  PELYAKEYPDFMEKPDKRTYISHNVIGQLFREVKDIAPHDSSIASFTRQVATKCYDPDME 964

Query: 2857 VDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVEAISA 3036
            VDGF DY+++AF +K  YD KLGN+++YYGIKTEAEILSG IM +SK+F +R+D +AI+ 
Sbjct: 965  VDGFEDYLEDAFYHKGNYDYKLGNMLDYYGIKTEAEILSGSIMTLSKSFTKRRDADAINV 1024

Query: 3037 AVRSLRNEVRSWFKK-----GNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYISFP 3201
            AV+SLR E R+WF +      +  DD YAKASAWYHVTYHP+++G YN G+ R H+ISFP
Sbjct: 1025 AVKSLRKEARAWFNEKDTGIDSGDDDVYAKASAWYHVTYHPNYFGLYNEGMNRAHFISFP 1084

Query: 3202 WCVYDKLIKIKKDNSRRASDMASLE 3276
            WCV+DKL  IKK+   +A  ++SLE
Sbjct: 1085 WCVFDKLGHIKKEKVNQARLISSLE 1109


>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
            gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
            1a [Cucumis sativus]
          Length = 1130

 Score = 1402 bits (3629), Expect = 0.0
 Identities = 718/1120 (64%), Positives = 870/1120 (77%), Gaps = 19/1120 (1%)
 Frame = +1

Query: 1    ERVKRFLEQITGQGTVIALEVKPSKRGP-RPYARVQFMNIRCAEIIMKLASASARLYFGS 177
            + VK FLE  TG GTV A++V+P KRG  R YA VQF +   AE+I+ LA+   RL++GS
Sbjct: 17   DAVKNFLEGHTGPGTVYAIKVRPPKRGGGRLYAIVQFTSATQAELIISLANQ--RLWYGS 74

Query: 178  FYLRAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMH 357
             YL+A  + +DI+  PRT+++ +E++ L FGCQ S EKF VLW+     V FG GM+KM+
Sbjct: 75   SYLKARATEVDIVPKPRTYMYTLEELLLCFGCQVSTEKFRVLWEGNVDLVTFGIGMRKMN 134

Query: 358  FVLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKKL--------NDS 513
            F L + SVEYRL+LSYE IWQI L+ P  Q+ K LLIQL GAPRIYKK+        ++ 
Sbjct: 135  FHLKYKSVEYRLELSYEIIWQIQLHCPRDQSMKYLLIQLSGAPRIYKKVAPNSGQIFDNP 194

Query: 514  VHSYFRETPDDQWIRTTDFTPSC-IGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRL 690
            + ++F+E  DDQW+RTTDFT SC IGQSS LCL+LP G +LP F+ +F +Y+E +  FRL
Sbjct: 195  LLNFFKEASDDQWVRTTDFTSSCSIGQSSSLCLKLPNGRQLPPFKQNFAYYEEFEHEFRL 254

Query: 691  -ETGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPK-R 864
             +    F+    L PIV   R   LPY+ILFK+  LVQ GC+P P LD +F+RLV+    
Sbjct: 255  IDEDANFSFCRDLAPIVDS-RSHVLPYKILFKINALVQYGCIPWPLLDASFYRLVERIIT 313

Query: 865  FDIRYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQI 1044
              I ++EHALEKL+++KEC YDP  +L EQY KY   R  PNSP ISLDDGLVYV RVQI
Sbjct: 314  TRIEFVEHALEKLFHLKECNYDPSNFLTEQYRKYS--RHPPNSPVISLDDGLVYVRRVQI 371

Query: 1045 TPTRVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRT 1224
            TP +V+F GPEVNVSNRVLRH+  ++DNFLRVSFVDEEWDKM STDL P++++  E+ +T
Sbjct: 372  TPCKVFFCGPEVNVSNRVLRHFSQYIDNFLRVSFVDEEWDKMRSTDLLPRMSSKSEDGKT 431

Query: 1225 KLYERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTNGLDADSIRRWMGDFRDI 1404
             +Y RILS LK GI+IG+K F FLAFSSSQLRDNSLWMFA    +DA  IR WMGDFR I
Sbjct: 432  DIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPDIDAAYIRAWMGDFRHI 491

Query: 1405 RNVAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVRNGTKYVFSDGIGKISADFARRV 1584
            +N AKYAARLGQSF SSTE LSV   E E I DIE  +   KYVFSDGIGKIS+ FA+ V
Sbjct: 492  KNPAKYAARLGQSFGSSTEALSVASNEREIIPDIEVQQGEIKYVFSDGIGKISSKFAKEV 551

Query: 1585 AIKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQ 1764
            A KCGF+ A PSAFQIRYGGYKGVVAVDP S++KLSLR SM K++S+NTKLDVL  SKYQ
Sbjct: 552  AAKCGFQ-AVPSAFQIRYGGYKGVVAVDPYSTIKLSLRKSMCKFESDNTKLDVLGHSKYQ 610

Query: 1765 PCFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILK 1944
            PCFLNRQ+ITL+STLGV+D +F+ KQ EAV QLD IL DPL+AQEAL+LMSPGEN+NILK
Sbjct: 611  PCFLNRQLITLMSTLGVRDEIFEKKQSEAVEQLDAILTDPLKAQEALELMSPGENTNILK 670

Query: 1945 EMLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVF 2124
            EMLKCGY+PD EP+LSMMLQTFR+SKLL+LR K+RIF+P  R MMGCLDET  LEYGQVF
Sbjct: 671  EMLKCGYQPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLDETRTLEYGQVF 730

Query: 2125 VQFSGAGRGGFYEESNMNYDNVSTDCNYVVEGNVVVAKNPCLHPGDVRVLKAINVLALHH 2304
            VQ S +GR     ES   ++ +  + + V+EGNV VAKNPCLHPGDVRVLKA+N+  L+H
Sbjct: 731  VQIS-SGRHRNLSES-FAFNRIGREHHLVIEGNVTVAKNPCLHPGDVRVLKAVNIPGLYH 788

Query: 2305 MVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHDV 2484
            MVDCVVFP +G RPHPNECSGSDLDGDIYFVCWD++LIP RQ+ PMDY+PAP + LD DV
Sbjct: 789  MVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPSRQIPPMDYTPAPPNELDRDV 848

Query: 2485 TIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGVP 2664
            T E+++EYF NY+VNDSLGIIANAHT FADKE   A S PCLELA+LFS+AVDFPKTGVP
Sbjct: 849  TTEDIQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCLELAKLFSVAVDFPKTGVP 908

Query: 2665 AEIPPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSYD 2844
            A IP HL VKE+PDFM+KPD+ SYES ++IGKLFR VKDIAP  + IRSFT++VARR YD
Sbjct: 909  AIIPSHLYVKEFPDFMEKPDRPSYESNKVIGKLFRAVKDIAPTLSHIRSFTRDVARRCYD 968

Query: 2845 PDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDVE 3024
             DMEV+GF DYV++AF +K+ YD KLGNL++YYGIK+EAE+LSG IM+MSK+F RR+D E
Sbjct: 969  CDMEVEGFEDYVEDAFYHKSNYDYKLGNLLDYYGIKSEAEVLSGSIMRMSKSFTRRRDAE 1028

Query: 3025 AISAAVRSLRNEVRSWFK----KGNESDDPYAKASAWYHVTYHPDFWGSYNVGLKRDHYI 3192
            AI+ AVRSLR E R+WF       + SDD +AKASAWY+VTYH  +WG YN G+KRDHY+
Sbjct: 1029 AINLAVRSLRKEARTWFNAREGADSNSDDLFAKASAWYYVTYHHSYWGCYNEGMKRDHYL 1088

Query: 3193 SFPWCVYDKLIKIKKDNSR---RASDMASLEREFSRRLNL 3303
            SFPWCVYDKL++IK++N R   RA+ +AS +R F   LNL
Sbjct: 1089 SFPWCVYDKLMQIKENNLRRRERAARLASFDR-FGHVLNL 1127


>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
            max] gi|571439308|ref|XP_006574822.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
            max] gi|571439310|ref|XP_006574823.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
            max]
          Length = 1125

 Score = 1400 bits (3624), Expect = 0.0
 Identities = 706/1115 (63%), Positives = 863/1115 (77%), Gaps = 21/1115 (1%)
 Frame = +1

Query: 7    VKRFLEQITGQGTVIALEVKPSK-RGPRPYARVQFMNIRCAEIIMKLASASAR-LYFGSF 180
            VK F+EQ TG+GTV A++++  K R PR +A +QF     A  +M  A+   R L +G+ 
Sbjct: 19   VKTFVEQYTGEGTVFAIKLRHGKGRVPRAFAIIQFTTANSATSMMSRANNILRTLRYGTS 78

Query: 181  YLRAWESPIDIIQNPRTFVHEMEQVTLNFGCQTSREKFSVLWKAESVSVKFGTGMKKMHF 360
            YL+A E   DI+  PR F+H ++ V L+FGCQ S+ +FSVLWK + V V FG+GM+KMHF
Sbjct: 79   YLKAREMERDIVPRPRVFLHSLDDVKLSFGCQISKGRFSVLWKKQDVIVNFGSGMRKMHF 138

Query: 361  VLCHNSVEYRLQLSYENIWQIVLYNPHGQTAKLLLIQLFGAPRIYKK--------LNDSV 516
            +  HN+V+Y+L+LSYENIW+I L+ P  +T + LLIQL GAPR+++          +D +
Sbjct: 139  LFSHNNVQYKLELSYENIWKIELHRPRNETTRYLLIQLLGAPRVFENDVPTSTNIFDDPL 198

Query: 517  HSYFRETPDDQWIRTTDFTP-SCIGQSSGLCLQLPYGMRLPNFQDSFVFYKESQDPFRLE 693
             ++F++ PD+QWIR  DFTP S IGQSS +CL+LP G +LPNF+++F +Y+ES+  + L+
Sbjct: 199  FNFFKDAPDEQWIRAIDFTPESRIGQSSAICLELPNGRQLPNFRENFAYYEESERQYTLQ 258

Query: 694  TGVPFAANLALVPIVHPPRGLELPYRILFKVCGLVQTGCLPGPKLDTNFFRLVDPKRFDI 873
            TGVPF+ N  LVPIV PP G+++ Y ILFKV  LVQ  CL GP LD +F+RLVDP+R   
Sbjct: 259  TGVPFSQNWGLVPIVAPPLGVKISYDILFKVNSLVQHACLAGPALDGDFYRLVDPRRMPR 318

Query: 874  RYIEHALEKLYYIKECCYDPVAWLNEQYEKYRTFREQPNSPAISLDDGLVYVHRVQITPT 1053
             +IE+ALEK+YY KE CY+P  WL +QY+ Y   +  P SPAISLD GLVYV RVQITP 
Sbjct: 319  EFIEYALEKIYYSKEFCYEPTKWLTDQYKTYLESKNHPRSPAISLDTGLVYVRRVQITPC 378

Query: 1054 RVYFSGPEVNVSNRVLRHYRDHVDNFLRVSFVDEEWDKMYSTDLSPKVAAGDENKRTKLY 1233
            +VYF GPE+NVSNRVLRH+R+H+DNFLRVSFVDEE DK++STDLS +     +NK+T++Y
Sbjct: 379  KVYFCGPEMNVSNRVLRHFREHIDNFLRVSFVDEELDKLFSTDLSSR----SQNKKTEIY 434

Query: 1234 ERILSTLKEGIIIGNKKFDFLAFSSSQLRDNSLWMFAPTN-GLDADSIRRWMGDFRDIRN 1410
             RILS LK GI++G+KKF+FLAFSSSQLR+NSLWMFAPT  G  A  IR+WMG+F  IRN
Sbjct: 435  TRILSILKNGIVVGDKKFEFLAFSSSQLRENSLWMFAPTETGCTAAYIRKWMGNFSQIRN 494

Query: 1411 VAKYAARLGQSFSSSTETLSVGEREVEKILDIEAVR-NGTKYVFSDGIGKISADFARRVA 1587
            VAKYAARLGQSF SSTETLSV   EVE I D++ +  +G +YVFSDGIGKIS +FA++VA
Sbjct: 495  VAKYAARLGQSFGSSTETLSVHRDEVEIIPDVKKLTYDGNEYVFSDGIGKISLEFAQKVA 554

Query: 1588 IKCGFKSATPSAFQIRYGGYKGVVAVDPDSSVKLSLRPSMLKYQSENTKLDVLSWSKYQP 1767
             KCG+   TPSAFQIRYGGYKGVVAVDP S  KLSLR SM KY S+NTKLDVL+ SK+QP
Sbjct: 555  KKCGY-DCTPSAFQIRYGGYKGVVAVDPKSCYKLSLRKSMRKYDSDNTKLDVLARSKFQP 613

Query: 1768 CFLNRQIITLLSTLGVKDYVFQTKQREAVAQLDDILVDPLRAQEALDLMSPGENSNILKE 1947
            C+LNRQ+I+LLSTLG+KD VF+ KQRE V QL+ IL D L+AQE LDLMS GE +N+LKE
Sbjct: 614  CYLNRQLISLLSTLGIKDDVFEKKQRETVNQLNTILTDSLKAQEVLDLMSAGEITNVLKE 673

Query: 1948 MLKCGYKPDGEPFLSMMLQTFRSSKLLDLRVKARIFVPQARQMMGCLDETGILEYGQVFV 2127
            ML CGYKP+ EPFLSMMLQTFR+SKLL+LR+K+RIF+P+ R MMGCLDET  LEYGQVFV
Sbjct: 674  MLICGYKPNEEPFLSMMLQTFRASKLLELRLKSRIFIPKGRAMMGCLDETRTLEYGQVFV 733

Query: 2128 QFSGAGRGGFYEESNMNYDNVSTDC--NYVVEGNVVVAKNPCLHPGDVRVLKAINVLALH 2301
            QFS           N++ D  S D   NY+V+G VVVAKNPCLHPGDVRVL+A++V  L+
Sbjct: 734  QFSNN------RLQNLSDDFFSYDLPKNYMVKGKVVVAKNPCLHPGDVRVLQAVDVPDLY 787

Query: 2302 HMVDCVVFPSRGMRPHPNECSGSDLDGDIYFVCWDSDLIPPRQVSPMDYSPAPTSRLDHD 2481
            HMVDCVVFP +G RPHPNECSGSDLDGDIYFVCWD +LIP R + PMDY+   T  LDHD
Sbjct: 788  HMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDHELIPSRPIDPMDYTAPATVELDHD 847

Query: 2482 VTIEEVEEYFTNYIVNDSLGIIANAHTVFADKETNMALSEPCLELARLFSIAVDFPKTGV 2661
            V IEEVEEYF NYIVNDSLGIIANAHTVFADKE   A+S+ C++LARLFS AVDFPKTGV
Sbjct: 848  VMIEEVEEYFANYIVNDSLGIIANAHTVFADKEHLKAMSDQCVKLARLFSTAVDFPKTGV 907

Query: 2662 PAEIPPHLRVKEYPDFMDKPDKNSYESTRIIGKLFREVKDIAPHTTSIRSFTKEVARRSY 2841
            PA IPP L VKEYPDFM+KPDK +Y+S  +IGKLFREVK+I+    SI SFTK VAR SY
Sbjct: 908  PAVIPPELHVKEYPDFMEKPDKPTYKSHNVIGKLFREVKEISTSAGSITSFTKLVARDSY 967

Query: 2842 DPDMEVDGFNDYVDEAFEYKTEYDNKLGNLMEYYGIKTEAEILSGGIMKMSKTFDRRKDV 3021
            D +MEVDGF DYVD+AF +KT YD KLGNLM+YYGIKTEAEIL G IMKMSK+F++R+D 
Sbjct: 968  DHEMEVDGFMDYVDDAFYHKTNYDYKLGNLMDYYGIKTEAEILGGNIMKMSKSFNKRRDA 1027

Query: 3022 EAISAAVRSLRNEVRSWFKKGNESD------DPYAKASAWYHVTYHPDFWGSYNVGLKRD 3183
            EAI+ AVRSLR E R+WF + +  D      D YAKASAWYHVTYHP +WG YN G+ RD
Sbjct: 1028 EAINMAVRSLRKEARAWFNENSSGDVDSGSSDVYAKASAWYHVTYHPSYWGCYNEGMNRD 1087

Query: 3184 HYISFPWCVYDKLIKIKKDNSRRASDMASLEREFS 3288
            HY+SF WCVY  L++IKK+  + +   +SLE  FS
Sbjct: 1088 HYLSFSWCVYPLLVQIKKE--KLSIRRSSLEYSFS 1120