BLASTX nr result
ID: Rehmannia22_contig00004530
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00004530
(316 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670... 86 7e-15
ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668... 81 2e-13
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 70 4e-10
gb|EEC70571.1| hypothetical protein OsI_01753 [Oryza sativa Indi... 69 5e-10
gb|EAZ11749.1| hypothetical protein OsJ_01617 [Oryza sativa Japo... 69 5e-10
ref|XP_006378155.1| hypothetical protein POPTR_0010s04250g, part... 69 8e-10
ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arab... 68 1e-09
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 67 2e-09
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 66 4e-09
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 66 5e-09
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 65 7e-09
gb|AAF81336.1|AC007767_16 Strong similarity to a putative non-LT... 65 9e-09
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub... 64 2e-08
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 64 2e-08
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 64 3e-08
ref|XP_006576000.1| PREDICTED: uncharacterized protein LOC102669... 63 4e-08
ref|XP_006603477.1| PREDICTED: uncharacterized protein LOC102668... 62 8e-08
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 62 8e-08
dbj|BAB01155.1| unnamed protein product [Arabidopsis thaliana] g... 62 1e-07
ref|NP_063979.1| orf315 gene product (mitochondrion) [Beta vulga... 62 1e-07
>ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max]
Length = 383
Score = 85.5 bits (210), Expect = 7e-15
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Frame = +1
Query: 1 QQSAIDALTPLVNDNGLN----SSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLAC 168
++ I+ ++N G N + KMYD R P W + IW IP K SF WLA
Sbjct: 249 KEENIEVAKLMLNSWGCNEQTLAGKMYDYIRGTRPVVHWSSIIWNPVIPSKMSFILWLAT 308
Query: 169 KDRLSTLDNLSYIDTDPMCKLCKNELESAPHLFFICTVTNSLWCRIKNW 315
K+RL LD ++++ +C LC NE ES HLFF C + +W I++W
Sbjct: 309 KNRLLALDRAAFLNKGFLCPLCTNEAESHAHLFFSCRTSLRVWAHIRDW 357
>ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668530 [Glycine max]
Length = 477
Score = 80.9 bits (198), Expect = 2e-13
Identities = 35/104 (33%), Positives = 57/104 (54%)
Frame = +1
Query: 4 QSAIDALTPLVNDNGLNSSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLS 183
++A L ++ L + K YD R P W++ +W IP K SF WLA K+ L
Sbjct: 283 EAAKQTLNSWNSNEQLLAGKAYDYIRGVKPAVNWNSVVWNPAIPSKMSFILWLATKNHLL 342
Query: 184 TLDNLSYIDTDPMCKLCKNELESAPHLFFICTVTNSLWCRIKNW 315
TLD ++++ +C LC+ + +S HLFF C ++ +W I++W
Sbjct: 343 TLDRAAFLNKGLLCPLCRTKAKSHAHLFFSCRISLQVWANIRDW 386
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/75 (44%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +1
Query: 79 RNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYID--TDPMCKLCKNELES 252
RN WH IW PKFSFC WLA ++RLST D + + P C LC N +E+
Sbjct: 478 RNTSTPVTWHMGIWFAHATPKFSFCAWLAVQNRLSTGDKMLQWNRRLSPTCVLCNNNIET 537
Query: 253 APHLFFICTVTNSLW 297
HLFF C T +W
Sbjct: 538 RNHLFFSCCYTAEIW 552
>gb|EEC70571.1| hypothetical protein OsI_01753 [Oryza sativa Indica Group]
Length = 395
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/98 (36%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +1
Query: 22 LTPLVNDNGLNSSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNL- 198
L+PL L + +Y HN IWK PPKF F WL KDRL T NL
Sbjct: 204 LSPLSQQGDLTTRGIYHTLLPPSETDPVHNFIWKNASPPKFKFFAWLLSKDRLPTAKNLF 263
Query: 199 -SYIDTDPMCKLCKNELESAPHLFFICTVTNSLWCRIK 309
I P C +C+ E++ HLFF+C + W I+
Sbjct: 264 TKIILQSPQCAICQTGEETSNHLFFMCPFATAFWTTIR 301
>gb|EAZ11749.1| hypothetical protein OsJ_01617 [Oryza sativa Japonica Group]
Length = 267
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +1
Query: 22 LTPLVNDNGLNSSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNL- 198
L+PL L + ++Y HN IWK PPKF F WL KDRLST NL
Sbjct: 76 LSPLSQQGDLTTREIYHTLLPPSETDLVHNFIWKNASPPKFKFFAWLLSKDRLSTAKNLF 135
Query: 199 -SYIDTDPMCKLCKNELESAPHLFFICTVTNSLWCRIK 309
I P C + + E++ HLFF+C + W I+
Sbjct: 136 TKIILQSPQCAIRQTGEETSNHLFFMCPFATAFWTTIR 173
>ref|XP_006378155.1| hypothetical protein POPTR_0010s04250g, partial [Populus
trichocarpa] gi|550329025|gb|ERP55952.1| hypothetical
protein POPTR_0010s04250g, partial [Populus trichocarpa]
Length = 112
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/90 (36%), Positives = 48/90 (53%)
Frame = +1
Query: 46 GLNSSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYIDTDPMC 225
G ++ Y F + W + +W+Q+ P+ +F WL K L T D L +I TDP+
Sbjct: 10 GSFTANAYHFFTYKVDHVQWASVVWEQWFLPRHNFSLWLLGK--LRTRDRLQFISTDPLY 67
Query: 226 KLCKNELESAPHLFFICTVTNSLWCRIKNW 315
LC N ES HLFF C ++SLW + + W
Sbjct: 68 PLCHNSSESHAHLFFSCAWSSSLWGKARYW 97
>ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arabidopsis lyrata subsp.
lyrata] gi|297311371|gb|EFH41795.1| hypothetical protein
ARALYDRAFT_917542 [Arabidopsis lyrata subsp. lyrata]
Length = 227
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/89 (33%), Positives = 45/89 (50%)
Frame = +1
Query: 40 DNGLNSSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYIDTDP 219
D+ S +++ R + WHN++W P++SF WLA KD+LST + +
Sbjct: 60 DSSFTSRHTWNLLRKAKHKVLWHNSVWFPQRVPRYSFIVWLAVKDQLSTGTRMRAWGVEQ 119
Query: 220 MCKLCKNELESAPHLFFICTVTNSLWCRI 306
C C+ ES HLFF C T S+W +
Sbjct: 120 PCVFCRERDESRDHLFFACPFTYSIWSEL 148
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +1
Query: 103 WHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYID--TDPMCKLCKNELESAPHLFFIC 276
WH +W PKFSFC WLA DRLST D + + C LC+N ES HLFF C
Sbjct: 1282 WHKGVWFTHSTPKFSFCVWLAVYDRLSTGDKMLLWNRGLQGTCLLCRNATESRDHLFFSC 1341
Query: 277 TVTNSLW 297
+ ++ +W
Sbjct: 1342 SFSSEVW 1348
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 66.2 bits (160), Expect = 4e-09
Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = +1
Query: 13 IDALTPLVNDNGLNSSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLD 192
ID + L+ +N K+Y ++ G R W N ++ P+ +F WLAC RLST D
Sbjct: 313 IDNMEELMIRGSINMGKLYRKLQDCGQRKEWKNLLYGNTARPRANFILWLACHGRLSTKD 372
Query: 193 NL---SYIDTDPMCKLCKNELESAPHLFFICTVTNSLWCRIKNW 315
L ID D C C E ES HLFF+C + +W + W
Sbjct: 373 RLCKYGMID-DKSCCFCSEE-ESMNHLFFVCDNSKRVWMEVLQW 414
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 65.9 bits (159), Expect = 5e-09
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 79 RNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYID--TDPMCKLCKNELES 252
R + WH +W PKFSFC WLA ++RLST D + + T C C + +E+
Sbjct: 770 RTSSNQRAWHKGVWFAHATPKFSFCAWLAIRNRLSTGDRMMTWNNGTPTTCVFCSSPMET 829
Query: 253 APHLFFICTVTNSLWCRI 306
HLFF C ++ +W I
Sbjct: 830 RDHLFFQCCYSSEIWTSI 847
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +1
Query: 55 SSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYID--TDPMCK 228
S +++ R +G WH AIW PKF+F +WLA DRL+T D ++ + +C
Sbjct: 1223 SPEIWHQIREQGLVKQWHKAIWFSGATPKFTFISWLAAHDRLTTGDKMASWNRGISSVCV 1282
Query: 229 LCKNELESAPHLFFICTVTNSLWCRI 306
LC ES HLFF C ++ +W R+
Sbjct: 1283 LCNISAESRDHLFFSCNFSSHIWDRL 1308
>gb|AAF81336.1|AC007767_16 Strong similarity to a putative non-LTR retroelement reverse
transcriptase At2g23880 gi|3738337 from Arabidopsis
thaliana BAC F27L4 gb|AC005170 [Arabidopsis thaliana]
Length = 206
Score = 65.1 bits (157), Expect = 9e-09
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 79 RNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYID--TDPMCKLCKNELES 252
R + WH +W PKFSFC WLA ++RLS +D + + T C C + +E+
Sbjct: 57 RTSSNQRAWHTGVWFAHATPKFSFCAWLAVRNRLSMVDRMMTWNNGTPTTCVFCSSPMET 116
Query: 253 APHLFFICTVTNSLWCRI 306
HLFF C ++ +W I
Sbjct: 117 RDHLFFQCHYSSEIWTSI 134
>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
Length = 441
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +1
Query: 79 RNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLS--YIDTDPMCKLCKNELES 252
R + PR+ W+ IW PK+SF TWLA K+RLST D + + C C+ + E+
Sbjct: 267 REQKPRNEWYQGIWFSHATPKYSFITWLATKNRLSTGDRMMSWNAGVNLSCVFCQEQTET 326
Query: 253 APHLFFICTVTNSLW 297
HLFF C + +W
Sbjct: 327 RNHLFFTCRYSREVW 341
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 63.9 bits (154), Expect = 2e-08
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Frame = +1
Query: 79 RNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNL----SYIDTDPMCKLCKNEL 246
R+ R WH IW PK+SFC+WLA RL T D + + I TD C C+ L
Sbjct: 1048 RSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGIATD--CIFCQGTL 1105
Query: 247 ESAPHLFFICTVTNSLW 297
E+ HLFF C+ T+ +W
Sbjct: 1106 ETRDHLFFTCSFTSVIW 1122
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 103 WHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSY--IDTDPMCKLCKNELESAPHLFFIC 276
WH +W PK SFC WLA ++LST + + + + C LC N LE+ HLFF C
Sbjct: 761 WHKGVWFAHETPKHSFCVWLAIWNKLSTGQRMQHWNLQSSVGCVLCNNNLETRDHLFFSC 820
Query: 277 TVTNSLW 297
T+ +W
Sbjct: 821 AYTSGIW 827
>ref|XP_006576000.1| PREDICTED: uncharacterized protein LOC102669332 [Glycine max]
Length = 247
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/70 (47%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +1
Query: 115 IWKQFIPPKFSFCTWLACKDRLSTLDNLSYID---TDPMCKLCKNELESAPHLFFICTVT 285
+WK IPPK TW KDRL T NL TDPMC LC N E A HLFF C+
Sbjct: 82 LWKLKIPPKAKIFTWRLIKDRLPTKLNLRGRQVEITDPMCPLCNNSEEDAAHLFFNCSKV 141
Query: 286 NSLWCRIKNW 315
LW +W
Sbjct: 142 LPLWWESLSW 151
>ref|XP_006603477.1| PREDICTED: uncharacterized protein LOC102668204 [Glycine max]
Length = 181
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/70 (47%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +1
Query: 115 IWKQFIPPKFSFCTWLACKDRLSTLDNLSYID---TDPMCKLCKNELESAPHLFFICTVT 285
+WK IPPK TW KDRL T NL TDPMC LC N E A HLFF C+
Sbjct: 16 LWKLKIPPKPKIFTWRLIKDRLPTKLNLRGRQVEITDPMCPLCNNSEEDAAHLFFNCSNV 75
Query: 286 NSLWCRIKNW 315
LW +W
Sbjct: 76 LPLWWESLSW 85
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Frame = +1
Query: 37 NDNGLNSSKMYDIFRNEGPRHFWHNAIWKQFI-----PPKFSFCTWLACKDRLSTLDNLS 201
N + K Y + + + + N +WK+ I PK F WLA +RL+T + +S
Sbjct: 938 NHMNFSIKKTYKLLQED-----YENVVWKRLICNNKATPKSQFILWLAMLNRLATAERVS 992
Query: 202 YIDTD--PMCKLCKNELESAPHLFFICTVTNSLWCRI 306
+ D P+CK+C NE+E+ HLFF C + +W ++
Sbjct: 993 RWNRDVSPLCKMCGNEIETIQHLFFNCIYSKEIWGKV 1029
>dbj|BAB01155.1| unnamed protein product [Arabidopsis thaliana]
gi|49823524|gb|AAT68745.1| hypothetical protein
At3g17200 [Arabidopsis thaliana]
gi|60547763|gb|AAX23845.1| hypothetical protein
At3g17200 [Arabidopsis thaliana]
Length = 310
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 43 NGLNSSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNL----SYID 210
N +S+ + RN P + +W PK+SF TWL K+R++T D + +++
Sbjct: 120 NKFVTSETWRQIRNAKPEMEGYKGVWFSHSTPKYSFITWLVSKNRMATGDRMVLWNQHVN 179
Query: 211 TDPMCKLCKNELESAPHLFFICTVTNSLW 297
T C LC +E+ HLFF+CT + +W
Sbjct: 180 TS--CSLCDEPMETRDHLFFVCTYSRKVW 206
>ref|NP_063979.1| orf315 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435090|ref|YP_004222308.1| hypothetical protein
BevumaM_p073 [Beta vulgaris subsp. maritima]
gi|346683181|ref|YP_004842113.1| hypothetical protein
BemaM_p068 [Beta macrocarpa] gi|9049281|dbj|BAA99291.1|
orf315 [Beta vulgaris subsp. vulgaris]
gi|319439823|emb|CBJ17535.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500099|emb|CBX24917.1|
hypothetical protein [Beta macrocarpa]
Length = 315
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 61 KMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSY--IDTDPMCKLC 234
K+Y++ R R W I PK F TWL ++RL T D ++ + DP+C LC
Sbjct: 9 KLYELIRPSAARVHWKRIICNNKASPKSLFITWLGIQNRLYTKDRMANWNLACDPVCVLC 68
Query: 235 KNELESAPHLFFICTVTNSLW 297
ESA HLFF C + +W
Sbjct: 69 GQGAESAQHLFFACEYSQQVW 89