BLASTX nr result

ID: Rehmannia22_contig00004154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00004154
         (355 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006481430.1| PREDICTED: F-box/LRR-repeat protein At3g0303...    57   3e-06
ref|XP_006429576.1| hypothetical protein CICLE_v10011664mg [Citr...    57   3e-06
ref|XP_003589995.1| F-box/LRR-repeat protein [Medicago truncatul...    56   4e-06
ref|XP_003589973.1| F-box/LRR-repeat protein [Medicago truncatul...    56   4e-06
gb|EOY12921.1| F-box/RNI/FBD-like domains-containing protein, pu...    56   6e-06

>ref|XP_006481430.1| PREDICTED: F-box/LRR-repeat protein At3g03030-like [Citrus
           sinensis]
          Length = 469

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
 Frame = -3

Query: 293 DSIWLLIGFFSQKFFERTDNLQVLIIR-EVDARLKCWM-EEPKQVPKCLLSHLGTVRIYQ 120
           DS W L+       F R  NL+ L+   + D    CW  EEP  +P C L H+ T+ +  
Sbjct: 348 DSGWHLLPLI----FSRMPNLESLVFEVDEDTDFDCWWAEEPLSLPDCFLPHVKTIEMRG 403

Query: 119 FECAEDEFKLVRYILRNAQVLKRMEIQFK 33
           F   ++E KL++++L+N +VL  M I+F+
Sbjct: 404 FAGRKNELKLIKFLLKNCEVLNTMIIKFQ 432


>ref|XP_006429576.1| hypothetical protein CICLE_v10011664mg [Citrus clementina]
           gi|557531633|gb|ESR42816.1| hypothetical protein
           CICLE_v10011664mg [Citrus clementina]
          Length = 464

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
 Frame = -3

Query: 293 DSIWLLIGFFSQKFFERTDNLQVLIIR-EVDARLKCWM-EEPKQVPKCLLSHLGTVRIYQ 120
           DS W L+       F R  NL+ L+   + D    CW  EEP  +P C L H+ T+ +  
Sbjct: 348 DSGWHLLPLI----FSRMPNLESLVFEVDEDTDFDCWWAEEPLSLPDCFLPHVKTIEMRG 403

Query: 119 FECAEDEFKLVRYILRNAQVLKRMEIQFK 33
           F   ++E KL++++L+N +VL  M I+F+
Sbjct: 404 FAGRKNELKLIKFLLKNCEVLNTMIIKFQ 432


>ref|XP_003589995.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355479043|gb|AES60246.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 450

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
 Frame = -3

Query: 257 KFFERTDNLQVLIIREVDARL----KCWMEEPKQVPKCLLSHLGTVRIYQFECAEDEFKL 90
           K  E    LQ LII EVD       K W E+PK VP+CLLSHL T  +  +     E   
Sbjct: 343 KLLENFPKLQTLIIEEVDIVHNFGDKGW-EDPKVVPRCLLSHLTTCSLRNYSRINCELPF 401

Query: 89  VRYILRNAQVLKRMEIQ 39
            RYI++N+++L+ M IQ
Sbjct: 402 ARYIMQNSRILRTMTIQ 418


>ref|XP_003589973.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355479021|gb|AES60224.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 485

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
 Frame = -3

Query: 257 KFFERTDNLQVLIIREVDARL----KCWMEEPKQVPKCLLSHLGTVRIYQFECAEDEFKL 90
           K  E    LQ LII EVD       K W E+PK VP+CLLSHL T  +  +     E   
Sbjct: 343 KLLENFPKLQTLIIEEVDIVHNFGDKGW-EDPKVVPRCLLSHLTTCSLRNYSRINCELPF 401

Query: 89  VRYILRNAQVLKRMEIQ 39
            RYI++N+++L+ M IQ
Sbjct: 402 ARYIMQNSRILRTMTIQ 418


>gb|EOY12921.1| F-box/RNI/FBD-like domains-containing protein, putative [Theobroma
           cacao]
          Length = 449

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
 Frame = -3

Query: 257 KFFERTDNLQVLII-REVDAR---LKCWMEEPKQVPKCLLSHLGTVRIYQFECAEDEFKL 90
           +F E + NL+VL++ +  + R    +C    PK VPKCLLS L  V    FE    + ++
Sbjct: 339 RFLENSHNLEVLVLAKNANCRGLGHECCWRPPKSVPKCLLSPLTLVYFRGFEGLTYQLRV 398

Query: 89  VRYILRNAQVLKRMEI 42
           V++IL+NA+VLK MEI
Sbjct: 399 VKFILKNARVLKMMEI 414


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