BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00004081
         (2070 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   662   0.0  
emb|CBI37506.3| unnamed protein product [Vitis vinifera]              659   0.0  
ref|XP_006364840.1| PREDICTED: RNA polymerase I-specific transcr...   631   e-178
ref|XP_004232589.1| PREDICTED: RNA polymerase I-specific transcr...   629   e-177
ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcr...   620   e-175
ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcr...   614   e-173
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr...   608   e-171
ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr...   608   e-171
gb|EOX90600.1| Major facilitator superfamily protein isoform 1 [...   597   e-168
ref|XP_006483467.1| PREDICTED: RNA polymerase I-specific transcr...   587   e-165
gb|EXB36892.1| hypothetical protein L484_016497 [Morus notabilis]     582   e-163
ref|XP_006483560.1| PREDICTED: RNA polymerase I-specific transcr...   581   e-163
ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcr...   567   e-159
ref|XP_002524432.1| transcription initiation factor ia, putative...   566   e-158
ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcr...   559   e-156
gb|ESW06108.1| hypothetical protein PHAVU_010G020100g [Phaseolus...   548   e-153
ref|XP_002307198.2| RNA polymerase 1 specific transcription init...   538   e-150
ref|XP_006483561.1| PREDICTED: RNA polymerase I-specific transcr...   530   e-147
gb|EMJ05293.1| hypothetical protein PRUPE_ppa002914mg [Prunus pe...   517   e-144
ref|XP_004508346.1| PREDICTED: RNA polymerase I-specific transcr...   516   e-143

>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Vitis vinifera]
          Length = 636

 Score =  662 bits (1708), Expect = 0.0
 Identities = 353/601 (58%), Positives = 437/601 (72%), Gaps = 19/601 (3%)
 Frame = +1

Query: 1    QLVAVIHHKERLVAEEVALLVTCLKAVTGAVSCINIVHHGTLLAAIFGXXXXXXXXXXXX 180
            QL+ V+HHKERL  +EVALLVT LKA++GAVSCI++VHH +LL++IFG            
Sbjct: 46   QLIGVLHHKERLAPDEVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDVMD 105

Query: 181  XXXXXXXN-----GEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRV 345
                   +     G Y+D  L+MLV NFMPP +       ++ LKQPRGLA+K QVL RV
Sbjct: 106  ALLELILSLAASSGNYLDCSLDMLVSNFMPPYS------LLDFLKQPRGLARKDQVLSRV 159

Query: 346  HSTLKDIANVVPLSPLRLEKIVRDRMPNIYTKEAF---------IVMYVENMLRLEGGAM 498
            HSTLKDIA++VPL+P RL  IV  RMPN++TKE           I +YVENMLRLEGGA+
Sbjct: 160  HSTLKDIADLVPLAPSRLVPIVIQRMPNVFTKEPVSSICSTLFRIQIYVENMLRLEGGAI 219

Query: 499  GELVGSTILVSLVDRLIELDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIEPDSNELT 678
             ELVG+ +LV+L+DRL++LDVEIAW+E+LQDD  KG+F+MELED E  AD +E D  EL 
Sbjct: 220  RELVGNMMLVALMDRLVDLDVEIAWEEVLQDDCSKGIFEMELEDMEEPADDVENDGGELH 279

Query: 679  REALIQRFFCGNLVAEKLDSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAK 858
            R +L ++   GNL+AEKLDSLMVLTFEH++SC   GRL++VFE L+ SFQ T+L A+K+K
Sbjct: 280  RGSLSRKSLGGNLIAEKLDSLMVLTFEHLESCEAGGRLIEVFETLVLSFQTTVLNAFKSK 339

Query: 859  FTQFVMFYACSLDPENCGKMFANVLVNIFV-SGLNPEWRMSAVAYLASYLARAKFVPISF 1035
            F QFVMFYAC+LDPENCG  FA VL + FV S   P  RMSAVAYLASYL+R KF+  SF
Sbjct: 340  FAQFVMFYACALDPENCGVRFARVLADFFVCSTFPPLNRMSAVAYLASYLSRGKFLTASF 399

Query: 1036 VAAMLDSVVNWCFLYCKNVDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLL 1215
            VA +L+ +V WC  YCK  DGDINPK+H+VFY+GCQA MYVLCFRMR M+ VP L+SQLL
Sbjct: 400  VANILERLVVWCLEYCKIHDGDINPKAHQVFYSGCQAIMYVLCFRMRSMMNVPHLRSQLL 459

Query: 1216 LMRIEDILGHPLKPLQVCLPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGME 1395
            L+ +E IL HPL PL+VCLPSIVEEFLR  K  R+F++ ++F    LLESE SRAFGG+E
Sbjct: 460  LLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESELSRAFGGIE 519

Query: 1396 RFDMFFPFDPCLLRKCDRYIRPNYVYWSMVRSTYXXXXXXXXXXXXVAEAYGGENGMSI- 1572
            R DMFFPFDPCLL+KCDR+IRPN+VYWSM+R+TY             AE Y   +   + 
Sbjct: 520  RLDMFFPFDPCLLKKCDRFIRPNFVYWSMIRTTYDDGEDSSDEEP--AEDYEASHPDDVM 577

Query: 1573 PDDGSGRSYDEDNSDADEFDYSLDKMSITPRDS---RFESRIHRFVQMPSKIRPSTSPES 1743
             DD   RSYD  + + DEFD+S++KMSITP++S   RF   +   VQMPS+IRPSTSPES
Sbjct: 578  NDDAMARSYDSHDLELDEFDHSMNKMSITPKNSLYYRFGDELK--VQMPSRIRPSTSPES 635

Query: 1744 L 1746
            L
Sbjct: 636  L 636


>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  659 bits (1700), Expect = 0.0
 Identities = 347/591 (58%), Positives = 433/591 (73%), Gaps = 9/591 (1%)
 Frame = +1

Query: 1    QLVAVIHHKERLVAEEVALLVTCLKAVTGAVSCINIVHHGTLLAAIFGXXXXXXXXXXXX 180
            QL+ V+HHKERL  +EVALLVT LKA++GAVSCI++VHH +LL++IFG            
Sbjct: 46   QLIGVLHHKERLAPDEVALLVTSLKALSGAVSCIDMVHHKSLLSSIFGMSLWNYGPDVMD 105

Query: 181  XXXXXXXN-----GEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRV 345
                   +     G Y+D  L+MLV NFMPP +       ++ LKQPRGLA+K QVL RV
Sbjct: 106  ALLELILSLAASSGNYLDCSLDMLVSNFMPPYS------LLDFLKQPRGLARKDQVLSRV 159

Query: 346  HSTLKDIANVVPLSPLRLEKIVRDRMPNIYTKEAFIVMYVENMLRLEGGAMGELVGSTIL 525
            HSTLKDIA++VPL+P RL  IV  RMPN++TKE  I++YVENMLRLEGGA+ ELVG+ +L
Sbjct: 160  HSTLKDIADLVPLAPSRLVPIVIQRMPNVFTKEPLIMIYVENMLRLEGGAIRELVGNMML 219

Query: 526  VSLVDRLIELDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIEPDSNELTREALIQRFF 705
            V+L+DRL++LDVEIAW+E+LQDD  KG+F+MELED E  AD +E D  EL R +L ++  
Sbjct: 220  VALMDRLVDLDVEIAWEEVLQDDCSKGIFEMELEDMEEPADDVENDGGELHRGSLSRKSL 279

Query: 706  CGNLVAEKLDSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAKFTQFVMFYA 885
             GNL+AEKLDSLMVLTFEH++SC   GRL++VFE L+ SFQ T+L A+K+KF QFVMFYA
Sbjct: 280  GGNLIAEKLDSLMVLTFEHLESCEAGGRLIEVFETLVLSFQTTVLNAFKSKFAQFVMFYA 339

Query: 886  CSLDPENCGKMFANVLVNIFV-SGLNPEWRMSAVAYLASYLARAKFVPISFVAAMLDSVV 1062
            C+LDPENCG  FA VL + FV S   P  RMSAVAYLASYL+R KF+  SFVA +L+ +V
Sbjct: 340  CALDPENCGVRFARVLADFFVCSTFPPLNRMSAVAYLASYLSRGKFLTASFVANILERLV 399

Query: 1063 NWCFLYCKNVDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLLLMRIEDILG 1242
             WC  YCK  DGDINPK+H+VFY+GCQA MYVLCFRMR M+ VP L+SQLLL+ +E IL 
Sbjct: 400  VWCLEYCKIHDGDINPKAHQVFYSGCQAIMYVLCFRMRSMMNVPHLRSQLLLLPLETILK 459

Query: 1243 HPLKPLQVCLPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGMERFDMFFPFD 1422
            HPL PL+VCLPSIVEEFLR  K  R+F++ ++F    LLESE SRAFGG+ER DMFFPFD
Sbjct: 460  HPLSPLKVCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESELSRAFGGIERLDMFFPFD 519

Query: 1423 PCLLRKCDRYIRPNYVYWSMVRSTYXXXXXXXXXXXXVAEAYGGENGMSIPDDGSGRSYD 1602
            PCLL+KCDR+IRPN+VYWSM+R+TY                   ++G    D+     Y+
Sbjct: 520  PCLLKKCDRFIRPNFVYWSMIRTTY-------------------DDGEDSSDEEPAEDYE 560

Query: 1603 EDNSDADEFDYSLDKMSITPRDS---RFESRIHRFVQMPSKIRPSTSPESL 1746
               S  D+FD+S++KMSITP++S   RF   +   VQMPS+IRPSTSPESL
Sbjct: 561  A--SHPDDFDHSMNKMSITPKNSLYYRFGDELK--VQMPSRIRPSTSPESL 607


>ref|XP_006364840.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Solanum tuberosum]
          Length = 618

 Score =  631 bits (1627), Expect = e-178
 Identities = 333/589 (56%), Positives = 426/589 (72%), Gaps = 7/589 (1%)
 Frame = +1

Query: 1    QLVAVIHHKERLVAEEVALLVTCLKAVTGAVSCINIVHHGTLLAAI-----FGXXXXXXX 165
            QL+ V+H  E  V  +VALLVTCLKA++G+VSC++IVHH +L+A+I     +        
Sbjct: 46   QLLRVMHPDEG-VLPDVALLVTCLKALSGSVSCLDIVHHKSLIASILQMSMWNYGTDVMD 104

Query: 166  XXXXXXXXXXXXNGEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRV 345
                        +G+YVDLCLEMLV NFMPP +      F+ LL QP G+ +K QV+DRV
Sbjct: 105  ALMEFNISLAASSGQYVDLCLEMLVSNFMPPDS------FISLLNQPPGILRKGQVIDRV 158

Query: 346  HSTLKDIANVVPLSPLRLEKIVRDRMPNIYTKEAFIVMYVENMLRLEGGAMGELVGSTIL 525
            HSTL  IA ++PLSPLRLE+++ +RMP+I+TKE  I++YVENML+LE GA+G+LVG T+L
Sbjct: 159  HSTLTYIAKLLPLSPLRLERMITERMPHIFTKEPLILIYVENMLKLESGAIGDLVGRTML 218

Query: 526  VSLVDRLIELDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIEPDSNELTREALIQRFF 705
            V+++D+LI+LDV+IAWD+ILQ+DF KG+FDMEL D E   D  + + +EL + + ++R+F
Sbjct: 219  VAIMDKLIDLDVDIAWDDILQEDFTKGIFDMELGDLEWPMDDGQQNGDEL-QISWMERYF 277

Query: 706  CGNLVAEKLDSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAKFTQFVMFYA 885
             GNL A+KLDSL+VLTFEH+  C ESGRL QVF  LLQSFQ+T+L AYK+KF QFV+FYA
Sbjct: 278  SGNLNAQKLDSLIVLTFEHLNFCKESGRLSQVFHTLLQSFQQTVLMAYKSKFAQFVLFYA 337

Query: 886  CSLDPENCGKMFANVLVNIFVSGLNPEWRMSAVAYLASYLARAKFVPISFVAAMLDSVVN 1065
            CSLDPENCG+ FA+ L + F S   PEWRMSAVAYLASYLARAKF+PISFVA  ++S++ 
Sbjct: 338  CSLDPENCGRRFADTLFHKFKSSKYPEWRMSAVAYLASYLARAKFLPISFVAEYVESLLE 397

Query: 1066 WCFLYCKNVDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLLLMRIEDILGH 1245
            WC  YC N  G INPK+HK FYAGCQA MYVLCFRMR M+A+PR++S+ +   IEDIL H
Sbjct: 398  WCSTYCSNQGGSINPKAHKEFYAGCQAMMYVLCFRMRSMLAIPRIRSR-ISKHIEDILRH 456

Query: 1246 PLKPLQVCLPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGMERFDMFFPFDP 1425
            PL PL VCLPSIVEEFLRL KV  +  +P +F    LLESE S AFGG ER D FFPFDP
Sbjct: 457  PLSPLMVCLPSIVEEFLRLAKVTHL-DVPDNFVSSNLLESELSMAFGGRERLDTFFPFDP 515

Query: 1426 CLLRKCDRYIRPNYVYWSMVRSTYXXXXXXXXXXXXV--AEAYGGENGMSIPDDGSGRSY 1599
            CLL K DR+IRPN+VYWSMVRS+Y                E     NG++IP+DG+ RSY
Sbjct: 516  CLLMKSDRFIRPNFVYWSMVRSSYDNDDDDDEGTSDEDDIEICTAGNGINIPNDGAARSY 575

Query: 1600 DEDNSDADEFDYSLDKMSITPRDSRFESRIHRFVQMPSKIRPSTSPESL 1746
            D+   D DEF   + KMSITP+ +++   +   ++MPS + P   P+SL
Sbjct: 576  DQ---DLDEFGNKMSKMSITPKVAQW-GELQSGMRMPSSLLP--CPDSL 618


>ref|XP_004232589.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Solanum lycopersicum]
          Length = 617

 Score =  629 bits (1623), Expect = e-177
 Identities = 334/588 (56%), Positives = 425/588 (72%), Gaps = 6/588 (1%)
 Frame = +1

Query: 1    QLVAVIHHKERLVAEEVALLVTCLKAVTGAVSCINIVHHGTLLAAI-----FGXXXXXXX 165
            QL+ V+H  E  V  +VALLVTCLKA++G+VSC++IVHH +L+A+I     +        
Sbjct: 46   QLLRVMHPDEG-VLPDVALLVTCLKALSGSVSCLDIVHHKSLIASILQMSMWNYGTDVMD 104

Query: 166  XXXXXXXXXXXXNGEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRV 345
                        +G+YVDLCLEMLV NFMPP +      F+ LL QPRG+ +K QV+DRV
Sbjct: 105  ALMEFNISLATSSGQYVDLCLEMLVSNFMPPDS------FISLLNQPRGILRKGQVIDRV 158

Query: 346  HSTLKDIANVVPLSPLRLEKIVRDRMPNIYTKEAFIVMYVENMLRLEGGAMGELVGSTIL 525
            HSTL  IA +VPLSPLRLE+++ +RMP+I+TKE  I++YVENML+LE GA+G+LVG T+L
Sbjct: 159  HSTLTYIAKLVPLSPLRLERMITERMPHIFTKEPLILIYVENMLKLESGAIGDLVGRTML 218

Query: 526  VSLVDRLIELDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIEPDSNELTREALIQRFF 705
            V+++D+LI+LDV+IAWD+ILQ+DF KG+FDMEL D E   D  + + +EL + + ++R+F
Sbjct: 219  VAIMDKLIDLDVDIAWDDILQEDFTKGIFDMELGDLEWPMDDGQQNGDEL-QISWMERYF 277

Query: 706  CGNLVAEKLDSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAKFTQFVMFYA 885
             GNL A+KLDSL+VLTFEH+  C ESGRL QVF  LLQSFQ+T+L AYK+KF QFV+FYA
Sbjct: 278  SGNLNAQKLDSLIVLTFEHLNICKESGRLSQVFHTLLQSFQQTVLMAYKSKFAQFVLFYA 337

Query: 886  CSLDPENCGKMFANVLVNIFVSGLNPEWRMSAVAYLASYLARAKFVPISFVAAMLDSVVN 1065
            CSLDPENCG+ FA+ L + F S   PEWRMSAVAYLASYLARAKF+PISFVA  ++S++ 
Sbjct: 338  CSLDPENCGRRFADTLFHKFKSSKYPEWRMSAVAYLASYLARAKFLPISFVAEYVESLLE 397

Query: 1066 WCFLYCKNVDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLLLMRIEDILGH 1245
            WC  YC N  G INPK+HK FYAGCQA MYVLCFRMR M+A+PR++S+ +   IEDIL H
Sbjct: 398  WCSSYCFNQGGSINPKAHKEFYAGCQALMYVLCFRMRSMLAIPRIRSR-ISKHIEDILRH 456

Query: 1246 PLKPLQVCLPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGMERFDMFFPFDP 1425
            PL PL VCLPSIVEEFLRL KV  +  +P +     LLESE S AFGG ER D FFPFDP
Sbjct: 457  PLSPLMVCLPSIVEEFLRLAKVTHL-DVPDNVVSSNLLESELSMAFGGRERLDTFFPFDP 515

Query: 1426 CLLRKCDRYIRPNYVYWSMVRSTY-XXXXXXXXXXXXVAEAYGGENGMSIPDDGSGRSYD 1602
            CLL K DR+IRPN+VYWSMVR++Y               E     NG++IP+DG+ RSYD
Sbjct: 516  CLLMKSDRFIRPNFVYWSMVRNSYDNDDDDEGTSDEDDIEICTAGNGINIPNDGAARSYD 575

Query: 1603 EDNSDADEFDYSLDKMSITPRDSRFESRIHRFVQMPSKIRPSTSPESL 1746
            +   D DEF   + KMSITP+ +++   +    QMPS + P   P+SL
Sbjct: 576  Q---DLDEFGNKMSKMSITPKVAQW-GELQSGRQMPSSLLP--CPDSL 617


>ref|XP_006483466.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score =  620 bits (1599), Expect = e-175
 Identities = 329/594 (55%), Positives = 420/594 (70%), Gaps = 12/594 (2%)
 Frame = +1

Query: 1    QLVAVIHHKERLVAEEVALLVTCLKAVTGAVSCINIVHHGTLLAAIFGXXXXXXXXXXXX 180
            QLVAV+H   RL  +  ALL T LKA++GAVS I+I HH +LL +IFG            
Sbjct: 46   QLVAVMHLSGRLDPDNRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDVMD 105

Query: 181  XXXXXXX-----NGEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRV 345
                        NG+YVD CL MLV NF PPS      YF++ LK+P GL +K QVL RV
Sbjct: 106  ALKGLIISLAASNGKYVDSCLTMLVSNFTPPS------YFLDKLKEPHGLERKHQVLSRV 159

Query: 346  HSTLKDIANVVPLSPLRLEKIVRDRMPNIYTKEA---FIVMYVENMLRLEGGAMGELVGS 516
            H+ LK I ++VPL+P RL  IV  RMP ++ K      IV+Y ENML+LE  AMGELV S
Sbjct: 160  HAALKSIFDLVPLAPTRLLPIVVQRMPTVHNKHERLKMIVVYTENMLKLESSAMGELVRS 219

Query: 517  TILVSLVDRLIELDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIEPDSNELTREALIQ 696
            T+L+++VDRLI+LD+EI WD+IL DDF KG+F+MELED E  AD  E   +EL   +L +
Sbjct: 220  TLLMAVVDRLIDLDMEIGWDDILHDDFSKGIFEMELEDVEEAADDAEQVGDELPSGSLSR 279

Query: 697  RFFCGNLVAEKLDSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAKFTQFVM 876
            +   GNL+AE LDSLMVLTFEH++SC  +GRL++VFEILLQSFQ T+L AYK+KF QFVM
Sbjct: 280  KSLSGNLIAELLDSLMVLTFEHLESCEGTGRLIEVFEILLQSFQITVLNAYKSKFAQFVM 339

Query: 877  FYACSLDPENCGKMFANVLVNIFVSGLNPEW-RMSAVAYLASYLARAKFVPISFVAAMLD 1053
            FYAC+LDPENCG  FA +L ++FVSGL P   RMSAV+YLAS+L+RA+F+   F+ ++L 
Sbjct: 340  FYACALDPENCGLRFATMLADVFVSGLYPPLTRMSAVSYLASFLSRARFLSPCFIVSLLK 399

Query: 1054 SVVNWCFLYCKNVDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLLLMRIED 1233
             +V+WC  YC  + GDINPK+H+VFY+GCQA MYVLCFRMR ++ +PRLKSQLLLM +E 
Sbjct: 400  RLVDWCLEYCNILGGDINPKAHRVFYSGCQAIMYVLCFRMRSIMDIPRLKSQLLLMPLET 459

Query: 1234 ILGHPLKPLQVCLPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGMERFDMFF 1413
            +L H L PL+VCLPS+V EFL+  K  R+F++ ++F    LLESE SRAFGG+ER DMFF
Sbjct: 460  VLKHDLNPLKVCLPSVVSEFLQQSKAARLFTVSETFVFNDLLESELSRAFGGLERLDMFF 519

Query: 1414 PFDPCLLRKCDRYIRPNYVYWSMVRSTYXXXXXXXXXXXXVAEAYGGENGMSIPDDGSGR 1593
            PFDPCLL+K D +IRPN+VYWSMV++ Y              E    +NG  +  DG GR
Sbjct: 520  PFDPCLLKKSDSFIRPNFVYWSMVKTAYHGDEEDNSD-----EDVDEDNGDHVMVDGVGR 574

Query: 1594 SYDEDNSDADEFDYSLDKMSITPRDS---RFESRIHRFVQMPSKIRPSTSPESL 1746
            S DE + D DEF+YSL+KMSITP++S   R +  + + ++MPS+IRPS SPESL
Sbjct: 575  SPDEQDLDLDEFEYSLNKMSITPKNSFSCRLDGELRQPMKMPSRIRPSMSPESL 628


>ref|XP_006483559.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3-like isoform X1 [Citrus sinensis]
          Length = 628

 Score =  614 bits (1583), Expect = e-173
 Identities = 325/594 (54%), Positives = 420/594 (70%), Gaps = 12/594 (2%)
 Frame = +1

Query: 1    QLVAVIHHKERLVAEEVALLVTCLKAVTGAVSCINIVHHGTLLAAIFGXXXXXXXXXXXX 180
            QLVAV+H   RL  +  ALL T LKA++GAVS I+I HH +LL +IFG            
Sbjct: 46   QLVAVMHLSGRLDPDNRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDIMD 105

Query: 181  XXXXXXXN-----GEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRV 345
                   +     G+YVD CL MLV NF PPS      YF++ LK+P GL +K QVL RV
Sbjct: 106  ALKGLIISLAASSGKYVDSCLTMLVGNFTPPS------YFLDKLKEPHGLERKHQVLSRV 159

Query: 346  HSTLKDIANVVPLSPLRLEKIVRDRMPNIYTKEA---FIVMYVENMLRLEGGAMGELVGS 516
            H+ LK I ++VPL+P+RL  IV  RMP ++ K      IV+Y ENML+LE  AMGELV S
Sbjct: 160  HAALKSIFDLVPLAPMRLLPIVVQRMPTVHNKHERLKLIVVYTENMLKLESSAMGELVRS 219

Query: 517  TILVSLVDRLIELDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIEPDSNELTREALIQ 696
            T+L+++VDRLI+LD+EI WD+IL DDF KG+F+MELED E  AD  E   +EL   ++ +
Sbjct: 220  TLLMAVVDRLIDLDMEIGWDDILHDDFSKGIFEMELEDVEEAADDAEQVGDELPSGSISR 279

Query: 697  RFFCGNLVAEKLDSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAKFTQFVM 876
            +   GNL+AE LDSL+VLTFEH++SC  +GRL++VFEILLQSFQ T+L AYK+KF QFVM
Sbjct: 280  KSLSGNLIAELLDSLLVLTFEHLESCEGTGRLIEVFEILLQSFQITVLNAYKSKFAQFVM 339

Query: 877  FYACSLDPENCGKMFANVLVNIFVSGLNPEW-RMSAVAYLASYLARAKFVPISFVAAMLD 1053
            FYAC+LDPENCG  FA +L ++FVSGL P   RMS+V+YLASYL+RA+F+   F+ ++L 
Sbjct: 340  FYACALDPENCGLRFATMLADVFVSGLYPPLTRMSSVSYLASYLSRARFLSPCFIVSLLK 399

Query: 1054 SVVNWCFLYCKNVDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLLLMRIED 1233
             +V+WC  YC    G+INPK+H+VFY+GCQA MYVLCFRMR ++ VPRLKSQLLLM +E 
Sbjct: 400  RLVDWCLEYCNIPGGNINPKAHRVFYSGCQAIMYVLCFRMRSIMDVPRLKSQLLLMPLET 459

Query: 1234 ILGHPLKPLQVCLPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGMERFDMFF 1413
            +L H L PL+VCLPS+V EFL+  K  R+F++ ++F    LLESE SR FGG+ER DMFF
Sbjct: 460  VLKHNLNPLKVCLPSVVSEFLQQSKAARLFTVSETFIFNDLLESELSRDFGGLERLDMFF 519

Query: 1414 PFDPCLLRKCDRYIRPNYVYWSMVRSTYXXXXXXXXXXXXVAEAYGGENGMSIPDDGSGR 1593
            PFDPCLL+K D +IRPN++YWSMV++ Y              E    +NG  +  DG GR
Sbjct: 520  PFDPCLLKKSDSFIRPNFIYWSMVKTAYHGDEEDNSD-----EDVDEDNGDHVMVDGMGR 574

Query: 1594 SYDEDNSDADEFDYSLDKMSITPRDS---RFESRIHRFVQMPSKIRPSTSPESL 1746
            S DE + D DEF+YSL+KMSITP++S   R +  + + ++MPS+IRPSTSPESL
Sbjct: 575  SPDEQDLDLDEFEYSLNKMSITPKNSFSCRLDGELRQPMKMPSRIRPSTSPESL 628


>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Cucumis sativus]
          Length = 625

 Score =  608 bits (1568), Expect = e-171
 Identities = 328/590 (55%), Positives = 420/590 (71%), Gaps = 10/590 (1%)
 Frame = +1

Query: 1    QLVAVIHHKERLVAEEVALLVTCLKAVTGAVSCINIVHHGTLLAAIF-----GXXXXXXX 165
            QLV VIHH++RL  +EVALLVTCLKA++GAVSCI+I+ H +LLAAIF             
Sbjct: 46   QLVGVIHHRDRLSPDEVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMD 105

Query: 166  XXXXXXXXXXXXNGEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRV 345
                        NG+YVD CL+MLV NFMPP++      +++LLK+P GL +K +VL RV
Sbjct: 106  ALIELIISLAVSNGKYVDSCLDMLVNNFMPPNS------YMDLLKKPHGLTRKEEVLSRV 159

Query: 346  HSTLKDIANVVPLSPLRLEKIVRDRMPNIYTKEAFIVMYVENMLRLEGGAMGELVGSTIL 525
            H+ LKDI+++VPL+PLRLE+ V  +M  ++  E+   +YVENMLRLE GA+ E VG  IL
Sbjct: 160  HTALKDISDLVPLAPLRLEQKVVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKIL 219

Query: 526  VSLVDRLIELDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIEPDSNELTREALIQRFF 705
             +LVD+L++LDVEI WD+ILQDDF KG+F+MELED +   D I  DS+EL RE L +R  
Sbjct: 220  TALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDDTTDDINEDSSELPRE-LSRRSL 278

Query: 706  CGNLVAEKLDSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAKFTQFVMFYA 885
             GN++AE LDSL+VLTFEH++SC   GRL +VF+ILL SFQ+T+LTAYK+KF QF++FYA
Sbjct: 279  GGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYA 338

Query: 886  CSLDPENCGKMFANVLVNIFVSGLNPEW-RMSAVAYLASYLARAKFVPISFVAAMLDSVV 1062
            CSLDPE CG  FA  L ++FVS  +P   RMSAV+YLAS+L+R KF+  S V  +L  +V
Sbjct: 339  CSLDPEVCGARFAISLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLV 398

Query: 1063 NWCFLYCKNVDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLLLMRIEDILG 1242
            +WC  Y K ++ D NPK+HKVFY+GCQA MYVLCFRMR ++ +PRLKSQLLLM I  +L 
Sbjct: 399  DWCLEYGKTLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLT 458

Query: 1243 HPLKPLQVCLPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGMERFDMFFPFD 1422
            H L PL+VCLPSIVEEFLR  KV  +F+  ++F   GLLES++SR+FGG+ER DMFFPFD
Sbjct: 459  HRLSPLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLESDYSRSFGGLERLDMFFPFD 518

Query: 1423 PCLLRKCDRYIRPNYVYWSMVRSTYXXXXXXXXXXXXV---AEAYGGENGMSIPDD-GSG 1590
            PCLL+KCDRY+RP++VYWSMVR TY                AE +      ++ DD    
Sbjct: 519  PCLLKKCDRYLRPHFVYWSMVRPTYDEEEEEEDDGGSSDEDAEIFPDRIDENLMDDEAMA 578

Query: 1591 RSYDEDNSDADEFDYSLDKMSITPRDSRFESRIHRFVQMPSKIRPSTSPE 1740
             SYD+ + D D     L+KMSITPR+S  + R   FVQMPS+IRPS SPE
Sbjct: 579  ISYDDQDFDLDS---GLNKMSITPRNS-LQYRCD-FVQMPSRIRPSMSPE 623


>ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Cucumis sativus]
          Length = 626

 Score =  608 bits (1567), Expect = e-171
 Identities = 328/591 (55%), Positives = 420/591 (71%), Gaps = 11/591 (1%)
 Frame = +1

Query: 1    QLVAVIHHKERLVAEEVALLVTCLKAVTGAVSCINIVHHGTLLAAIF-----GXXXXXXX 165
            QLV VIHH++RL  +EVALLVTCLKA++GAVSCI+I+ H +LLAAIF             
Sbjct: 46   QLVGVIHHRDRLSPDEVALLVTCLKALSGAVSCIDIILHESLLAAIFKMSLWDYGSNVMD 105

Query: 166  XXXXXXXXXXXXNGEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRV 345
                        NG+YVD CL+MLV NFMPP++      +++LLK+P GL +K +VL RV
Sbjct: 106  ALIELIISLAVSNGKYVDSCLDMLVNNFMPPNS------YMDLLKKPHGLTRKEEVLSRV 159

Query: 346  HSTLKDIANVVPLSPLRLEKIVRDRMPNIYTKEAFIVMYVENMLRLEGGAMGELVGSTIL 525
            H+ LKDI+++VPL+PLRLE+ V  +M  ++  E+   +YVENMLRLE GA+ E VG  IL
Sbjct: 160  HTALKDISDLVPLAPLRLEQKVVHKMQRVFFNESLTTIYVENMLRLEKGALSEFVGRKIL 219

Query: 526  VSLVDRLIELDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIEPDSNELTREALIQRFF 705
             +LVD+L++LDVEI WD+ILQDDF KG+F+MELED +   D I  DS+EL RE L +R  
Sbjct: 220  TALVDKLLDLDVEIGWDDILQDDFSKGIFEMELEDDDDTTDDINEDSSELPRE-LSRRSL 278

Query: 706  CGNLVAEKLDSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAKFTQFVMFYA 885
             GN++AE LDSL+VLTFEH++SC   GRL +VF+ILL SFQ+T+LTAYK+KF QF++FYA
Sbjct: 279  GGNVIAETLDSLIVLTFEHLESCERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFIVFYA 338

Query: 886  CSLDPENCGKMFANVLVNIFVSGLNPEW-RMSAVAYLASYLARAKFVPISFVAAMLDSVV 1062
            CSLDPE CG  FA  L ++FVS  +P   RMSAV+YLAS+L+R KF+  S V  +L  +V
Sbjct: 339  CSLDPEVCGARFAISLADMFVSCNDPPLIRMSAVSYLASFLSRGKFLTTSLVTTILKRLV 398

Query: 1063 NWCFLYCKNVDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLLLMRIEDILG 1242
            +WC  Y K ++ D NPK+HKVFY+GCQA MYVLCFRMR ++ +PRLKSQLLLM I  +L 
Sbjct: 399  DWCLEYGKTLNVDPNPKAHKVFYSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGPLLT 458

Query: 1243 HPLKPLQVCLPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGMERFDMFFPFD 1422
            H L PL+VCLPSIVEEFLR  KV  +F+  ++F   GLLES++SR+FGG+ER DMFFPFD
Sbjct: 459  HRLSPLKVCLPSIVEEFLRQAKVANLFTPSENFIFNGLLESDYSRSFGGLERLDMFFPFD 518

Query: 1423 PCLLRKCDRYIRPNYVYWSMVRSTYXXXXXXXXXXXXV----AEAYGGENGMSIPDD-GS 1587
            PCLL+KCDRY+RP++VYWSMVR TY                 AE +      ++ DD   
Sbjct: 519  PCLLKKCDRYLRPHFVYWSMVRPTYDEEEEEEEDDGGSSDEDAEIFPDRIDENLMDDEAM 578

Query: 1588 GRSYDEDNSDADEFDYSLDKMSITPRDSRFESRIHRFVQMPSKIRPSTSPE 1740
              SYD+ + D D     L+KMSITPR+S  + R   FVQMPS+IRPS SPE
Sbjct: 579  AISYDDQDFDLDS---GLNKMSITPRNS-LQYRCD-FVQMPSRIRPSMSPE 624


>gb|EOX90600.1| Major facilitator superfamily protein isoform 1 [Theobroma cacao]
            gi|508698705|gb|EOX90601.1| Major facilitator superfamily
            protein isoform 1 [Theobroma cacao]
            gi|508698706|gb|EOX90602.1| Major facilitator superfamily
            protein isoform 1 [Theobroma cacao]
          Length = 628

 Score =  597 bits (1538), Expect = e-168
 Identities = 321/595 (53%), Positives = 410/595 (68%), Gaps = 13/595 (2%)
 Frame = +1

Query: 1    QLVAVIHHKERLVAEEVALLVTCLKAVTGAVSCINIVHHGTLLAAIFGXXXXXXXXXXXX 180
            QLVAV+HH +RL  +EVALL T LKA+ GAVSCI+   H +LL+AIF             
Sbjct: 45   QLVAVMHHSKRLAPDEVALLETTLKALGGAVSCIDTTLHDSLLSAIFSMSMWNYGPHVAD 104

Query: 181  XXXXXXX-----NGEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRV 345
                        NG+Y+DLCL MLV NF PP       YF++ LK PRGL +K QVL  V
Sbjct: 105  ALAELIVSLAISNGKYLDLCLGMLVSNFTPPP------YFLDKLKLPRGLERKGQVLSLV 158

Query: 346  HSTLKDIANVVPLSPLRLEKIVRDRMPNIYTKEAFIVMYVENMLRLEGGAMGELVGSTIL 525
            H+  K I++ +PL+PLRL  IV   MP IY K+  IV+YVENML+LE G +GELVGST+L
Sbjct: 159  HAAFKKISDYIPLAPLRLSNIVLQGMPTIYHKDRAIVIYVENMLKLESGEIGELVGSTML 218

Query: 526  VSLVDRLIELDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIEPDSNELTREALIQRFF 705
            +++VD+LIELD+EI WD ILQDDF KG+F+MELED +   +  E D+ E     L ++  
Sbjct: 219  MAVVDQLIELDLEIGWDAILQDDFSKGIFEMELEDVDEVEESAEQDTGEF---RLSRKSL 275

Query: 706  CGNLVAEKLDSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAKFTQFVMFYA 885
             GN +AE LD+L+VLTFEH++SC  +GRL +VFE LLQSFQ T+++AYK+KFTQFVMFYA
Sbjct: 276  AGNSIAELLDNLLVLTFEHLESCERAGRLAKVFETLLQSFQITVMSAYKSKFTQFVMFYA 335

Query: 886  CSLDPENCGKMFANVLVNIFVSGLNPE-WRMSAVAYLASYLARAKFVPISFVAAMLDSVV 1062
            C+LDP+ CG  FA +L ++FV   +P+  RMSAVAYLASYL+RAKF+  S +++ML  +V
Sbjct: 336  CALDPDYCGMRFATMLADLFVQDSHPQPIRMSAVAYLASYLSRAKFLSASLISSMLKRLV 395

Query: 1063 NWCFLYCKNVDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLLLMRIEDILG 1242
            +WC  Y K  DGDINP +H+VFY+GCQA MYVLCFRM+  + VPRLK Q LLM +E IL 
Sbjct: 396  DWCLEYGKTPDGDINPNAHRVFYSGCQAIMYVLCFRMKVFMDVPRLKMQ-LLMPMEQILK 454

Query: 1243 HPLKPLQVCLPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGMERFDMFFPFD 1422
            H L PL+VCLPS+VEEFLR  K   +F++ ++F   GLLESE SRAFGG+ER D FFPFD
Sbjct: 455  HKLNPLKVCLPSVVEEFLRQSKAACLFTVSKTFVFDGLLESELSRAFGGLERLDTFFPFD 514

Query: 1423 PCLLRKCDRYIRPNYVYWSMVRST----YXXXXXXXXXXXXVAEAYGGENGMSIPDDGSG 1590
            PCLL++CD +IRP +V+WSMV+ T    Y            + + +  EN   I DDG  
Sbjct: 515  PCLLKRCDSFIRPMFVFWSMVKPTYDDAYDDDNDDGSSDDELIQDFVNEN-EDIMDDGVA 573

Query: 1591 RSYDEDNSDADEFDYSLDKMSITPRDS---RFESRIHRFVQMPSKIRPSTSPESL 1746
            RS+DE   D DEFD +L KMSITP++    +F        +MP +IRPSTSPESL
Sbjct: 574  RSFDEQGLDLDEFDCALKKMSITPKNGFSYKFGGGFQEPTRMPCRIRPSTSPESL 628


>ref|XP_006483467.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Citrus sinensis]
          Length = 535

 Score =  587 bits (1513), Expect = e-165
 Identities = 301/522 (57%), Positives = 385/522 (73%), Gaps = 7/522 (1%)
 Frame = +1

Query: 202  NGEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRVHSTLKDIANVVP 381
            NG+YVD CL MLV NF PPS      YF++ LK+P GL +K QVL RVH+ LK I ++VP
Sbjct: 25   NGKYVDSCLTMLVSNFTPPS------YFLDKLKEPHGLERKHQVLSRVHAALKSIFDLVP 78

Query: 382  LSPLRLEKIVRDRMPNIYTKEA---FIVMYVENMLRLEGGAMGELVGSTILVSLVDRLIE 552
            L+P RL  IV  RMP ++ K      IV+Y ENML+LE  AMGELV ST+L+++VDRLI+
Sbjct: 79   LAPTRLLPIVVQRMPTVHNKHERLKMIVVYTENMLKLESSAMGELVRSTLLMAVVDRLID 138

Query: 553  LDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIEPDSNELTREALIQRFFCGNLVAEKL 732
            LD+EI WD+IL DDF KG+F+MELED E  AD  E   +EL   +L ++   GNL+AE L
Sbjct: 139  LDMEIGWDDILHDDFSKGIFEMELEDVEEAADDAEQVGDELPSGSLSRKSLSGNLIAELL 198

Query: 733  DSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAKFTQFVMFYACSLDPENCG 912
            DSLMVLTFEH++SC  +GRL++VFEILLQSFQ T+L AYK+KF QFVMFYAC+LDPENCG
Sbjct: 199  DSLMVLTFEHLESCEGTGRLIEVFEILLQSFQITVLNAYKSKFAQFVMFYACALDPENCG 258

Query: 913  KMFANVLVNIFVSGLNPEW-RMSAVAYLASYLARAKFVPISFVAAMLDSVVNWCFLYCKN 1089
              FA +L ++FVSGL P   RMSAV+YLAS+L+RA+F+   F+ ++L  +V+WC  YC  
Sbjct: 259  LRFATMLADVFVSGLYPPLTRMSAVSYLASFLSRARFLSPCFIVSLLKRLVDWCLEYCNI 318

Query: 1090 VDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLLLMRIEDILGHPLKPLQVC 1269
            + GDINPK+H+VFY+GCQA MYVLCFRMR ++ +PRLKSQLLLM +E +L H L PL+VC
Sbjct: 319  LGGDINPKAHRVFYSGCQAIMYVLCFRMRSIMDIPRLKSQLLLMPLETVLKHDLNPLKVC 378

Query: 1270 LPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGMERFDMFFPFDPCLLRKCDR 1449
            LPS+V EFL+  K  R+F++ ++F    LLESE SRAFGG+ER DMFFPFDPCLL+K D 
Sbjct: 379  LPSVVSEFLQQSKAARLFTVSETFVFNDLLESELSRAFGGLERLDMFFPFDPCLLKKSDS 438

Query: 1450 YIRPNYVYWSMVRSTYXXXXXXXXXXXXVAEAYGGENGMSIPDDGSGRSYDEDNSDADEF 1629
            +IRPN+VYWSMV++ Y              E    +NG  +  DG GRS DE + D DEF
Sbjct: 439  FIRPNFVYWSMVKTAYHGDEEDNSD-----EDVDEDNGDHVMVDGVGRSPDEQDLDLDEF 493

Query: 1630 DYSLDKMSITPRDS---RFESRIHRFVQMPSKIRPSTSPESL 1746
            +YSL+KMSITP++S   R +  + + ++MPS+IRPS SPESL
Sbjct: 494  EYSLNKMSITPKNSFSCRLDGELRQPMKMPSRIRPSMSPESL 535


>gb|EXB36892.1| hypothetical protein L484_016497 [Morus notabilis]
          Length = 616

 Score =  582 bits (1499), Expect = e-163
 Identities = 320/594 (53%), Positives = 402/594 (67%), Gaps = 12/594 (2%)
 Frame = +1

Query: 1    QLVAVIHHKERLVAEEVALLVTCLKAVTGAVSCINIVHHGTLLAAIFGXXXXXXXXXXXX 180
            +LVAV+HH+  L  +EVALLVT LKA++GAVS I+ V H +LL++IF             
Sbjct: 46   ELVAVMHHRGPLAPDEVALLVTSLKALSGAVSYIDSVLHESLLSSIFSMNMWNYRPDVMD 105

Query: 181  XXXXXXX-----NGEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRV 345
                        NG Y+D CL+MLV NF PP+      YF ++LKQPRG+A+K QVL RV
Sbjct: 106  ALLELIISLAASNGTYIDSCLDMLVGNFTPPN------YFTDMLKQPRGIARKDQVLSRV 159

Query: 346  HSTLKDIANVVPLSPLRLEKIVRDRMPNIYTKEAFIVMYVENMLRLEGGAMGELVGSTIL 525
            HS+LK +A++VPLSP+RL  I+  R P+  +KE  +V+YVENML+LE G  GELVGS +L
Sbjct: 160  HSSLKVLADLVPLSPMRLLPIIIQRKPHYCSKEIILVIYVENMLKLESGIFGELVGSAML 219

Query: 526  VSLVDRLIELDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIEPDSNELTREALIQRFF 705
              LVD L++LDVEI WD+ILQD+  KG+F MELED +   D    D  EL RE L ++  
Sbjct: 220  SGLVDLLLDLDVEIGWDDILQDESAKGIFSMELEDVDEDIDDELMDGGELPRE-LSRKSL 278

Query: 706  CGNLVAEKLDSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAKFTQFVMFYA 885
             GNL A KLDSLMVL FEH++SC    RLV+VFE LLQ FQKT+LTAYK+KF+QFVMFYA
Sbjct: 279  VGNLFARKLDSLMVLIFEHLESCEVGRRLVEVFETLLQPFQKTVLTAYKSKFSQFVMFYA 338

Query: 886  CSLDPENCGKMFANVLVNIFVSGLNPE-WRMSAVAYLASYLARAKFVPISFVAAMLDSVV 1062
            C+LDPENCG  FAN+L + F+S  +P   RMSAVAYLASYL+R KF+  S +A  L  +V
Sbjct: 339  CALDPENCGVRFANMLGDTFISNSHPPLLRMSAVAYLASYLSRGKFLSTSLIADTLKRLV 398

Query: 1063 NWCFLYCKNVDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLLLMRIEDILG 1242
            +WC  YC   +G+INPK+H++FY+GCQA MY LCFRMR ++ VP  KSQ LLM I  IL 
Sbjct: 399  DWCLDYCTIQEGEINPKAHRIFYSGCQAIMYALCFRMRSIMGVPWFKSQ-LLMPINLILS 457

Query: 1243 HPLKPLQVCLPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGMERFDMFFPFD 1422
            H L PL+VCLPSIV EFLR  K   +F   + F     LESE S+ FGGMER DMFFPFD
Sbjct: 458  HKLSPLKVCLPSIVTEFLRQSKAAGLFITSERFNFDDYLESELSKGFGGMERLDMFFPFD 517

Query: 1423 PCLLRKCDRYIRPNYVYWSMVRSTYXXXXXXXXXXXXVAEAYGGENGMSIPDDGS---GR 1593
            PCLL++CD +IRP YVYWSMVR TY                 G E G     D +   G 
Sbjct: 518  PCLLKRCDSFIRPYYVYWSMVRPTYDD---------------GQEEGSDEEVDEAPLGGN 562

Query: 1594 SYDEDNSDADEFDYSLDKMSITPRDS---RFESRIHRFVQMPSKIRPSTSPESL 1746
            +   ++ D DEFD ++++MSITP+DS   RF + +   ++MPS+IRPSTSPESL
Sbjct: 563  TKSREDFDLDEFDSAMNQMSITPKDSLKHRFGAALKEPLRMPSRIRPSTSPESL 616


>ref|XP_006483560.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3-like isoform X2 [Citrus sinensis]
          Length = 535

 Score =  581 bits (1497), Expect = e-163
 Identities = 297/522 (56%), Positives = 385/522 (73%), Gaps = 7/522 (1%)
 Frame = +1

Query: 202  NGEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRVHSTLKDIANVVP 381
            +G+YVD CL MLV NF PPS      YF++ LK+P GL +K QVL RVH+ LK I ++VP
Sbjct: 25   SGKYVDSCLTMLVGNFTPPS------YFLDKLKEPHGLERKHQVLSRVHAALKSIFDLVP 78

Query: 382  LSPLRLEKIVRDRMPNIYTKEA---FIVMYVENMLRLEGGAMGELVGSTILVSLVDRLIE 552
            L+P+RL  IV  RMP ++ K      IV+Y ENML+LE  AMGELV ST+L+++VDRLI+
Sbjct: 79   LAPMRLLPIVVQRMPTVHNKHERLKLIVVYTENMLKLESSAMGELVRSTLLMAVVDRLID 138

Query: 553  LDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIEPDSNELTREALIQRFFCGNLVAEKL 732
            LD+EI WD+IL DDF KG+F+MELED E  AD  E   +EL   ++ ++   GNL+AE L
Sbjct: 139  LDMEIGWDDILHDDFSKGIFEMELEDVEEAADDAEQVGDELPSGSISRKSLSGNLIAELL 198

Query: 733  DSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAKFTQFVMFYACSLDPENCG 912
            DSL+VLTFEH++SC  +GRL++VFEILLQSFQ T+L AYK+KF QFVMFYAC+LDPENCG
Sbjct: 199  DSLLVLTFEHLESCEGTGRLIEVFEILLQSFQITVLNAYKSKFAQFVMFYACALDPENCG 258

Query: 913  KMFANVLVNIFVSGLNPEW-RMSAVAYLASYLARAKFVPISFVAAMLDSVVNWCFLYCKN 1089
              FA +L ++FVSGL P   RMS+V+YLASYL+RA+F+   F+ ++L  +V+WC  YC  
Sbjct: 259  LRFATMLADVFVSGLYPPLTRMSSVSYLASYLSRARFLSPCFIVSLLKRLVDWCLEYCNI 318

Query: 1090 VDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLLLMRIEDILGHPLKPLQVC 1269
              G+INPK+H+VFY+GCQA MYVLCFRMR ++ VPRLKSQLLLM +E +L H L PL+VC
Sbjct: 319  PGGNINPKAHRVFYSGCQAIMYVLCFRMRSIMDVPRLKSQLLLMPLETVLKHNLNPLKVC 378

Query: 1270 LPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGMERFDMFFPFDPCLLRKCDR 1449
            LPS+V EFL+  K  R+F++ ++F    LLESE SR FGG+ER DMFFPFDPCLL+K D 
Sbjct: 379  LPSVVSEFLQQSKAARLFTVSETFIFNDLLESELSRDFGGLERLDMFFPFDPCLLKKSDS 438

Query: 1450 YIRPNYVYWSMVRSTYXXXXXXXXXXXXVAEAYGGENGMSIPDDGSGRSYDEDNSDADEF 1629
            +IRPN++YWSMV++ Y              E    +NG  +  DG GRS DE + D DEF
Sbjct: 439  FIRPNFIYWSMVKTAYHGDEEDNSD-----EDVDEDNGDHVMVDGMGRSPDEQDLDLDEF 493

Query: 1630 DYSLDKMSITPRDS---RFESRIHRFVQMPSKIRPSTSPESL 1746
            +YSL+KMSITP++S   R +  + + ++MPS+IRPSTSPESL
Sbjct: 494  EYSLNKMSITPKNSFSCRLDGELRQPMKMPSRIRPSTSPESL 535


>ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like [Glycine max]
          Length = 628

 Score =  567 bits (1461), Expect = e-159
 Identities = 308/599 (51%), Positives = 406/599 (67%), Gaps = 17/599 (2%)
 Frame = +1

Query: 1    QLVAVIHHKERLVAEEVALLVTCLKAVTGAVSCINIVHHGTLLAAI-----FGXXXXXXX 165
            +LV  +H K+ L  +EVA+LVT LKA++GAVS I+ VHH +LL A+     +        
Sbjct: 46   ELVGYLHPKKHLNPDEVAILVTTLKALSGAVSYIDSVHHESLLFAVSRMSLWNCGIDIMD 105

Query: 166  XXXXXXXXXXXXNGEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRV 345
                        NG+Y+D CLEMLV NF+PP       Y ++ L+Q  G+ +K +VL RV
Sbjct: 106  ALLELIISLAVSNGKYIDWCLEMLVKNFVPPF------YLLDSLRQENGIDRKNKVLSRV 159

Query: 346  HSTLKDIANVVPLSPLRLEKIVRDRMPNIYTKEAFIVMYVENMLRLEGGAMGELVGSTIL 525
            H+ LK+IA++VPL+PLRL  IV  +MP++++KE  IVMYVENMLRLE GA+GE VGST+L
Sbjct: 160  HAALKEIADLVPLAPLRLSPIVIQKMPSVFSKETEIVMYVENMLRLESGALGETVGSTML 219

Query: 526  VSLVDRLIELDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIEPDSNELTREALIQRFF 705
             +LVDRL+ELDVEI WD ILQ+D  KG+F+MELED     D  E   + L+ E L ++  
Sbjct: 220  PALVDRLLELDVEIGWDGILQEDA-KGIFEMELEDVTEFTDEDENCDSMLSSELLNRKNL 278

Query: 706  CGNLVAEKLDSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAKFTQFVMFYA 885
             GNLV EKLDSLMVL F H++SC  SGRL +VF  LL SFQ+T+L AYK+KFTQFVMFYA
Sbjct: 279  QGNLVVEKLDSLMVLAFLHLESCQNSGRLAEVFNTLLASFQRTVLNAYKSKFTQFVMFYA 338

Query: 886  CSLDPENCGKMFANVLVNIFVSGLNPE-WRMSAVAYLASYLARAKFVPISFVAAMLDSVV 1062
            C+LDPE CG  FA VL ++F    NP   RMSAVAYLASYL RAKF+  + V +++ S+V
Sbjct: 339  CALDPEGCGVKFAMVLADMFGGDANPPITRMSAVAYLASYLTRAKFLSAALVTSIIQSLV 398

Query: 1063 NWCFLYCKNVDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLLLMRIEDILG 1242
            +WC+ YCK  D D+NP++H+VFY+GCQA MY++CFRMR ++ VPRLK QLL M +E IL 
Sbjct: 399  DWCYAYCKFRDFDMNPRAHQVFYSGCQAIMYIMCFRMRSLMDVPRLKLQLLNMPMEAILK 458

Query: 1243 HPLKPLQVCLPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGMERFDMFFPFD 1422
            H L PL+VCLP++V EFLR  K  ++F   +SF    +LES+ S+AFGGM+R DMFFPFD
Sbjct: 459  HKLSPLKVCLPTVVVEFLRQAKAAQLFMASESFVFDDMLESDLSKAFGGMDRLDMFFPFD 518

Query: 1423 PCLLRKCDRYIRPNYVYWSMVRSTYXXXXXXXXXXXXVAEAYGGENGMSIPDDGSGRSYD 1602
            PCLL++ + YIRP++V WS VR+TY                   ++G  + DD       
Sbjct: 519  PCLLKRSESYIRPHFVRWSKVRTTYDDDDDNDEV---------SDSGSELSDDDFIDRNA 569

Query: 1603 EDNSDAD--------EFDYSLDKMSITPRDS---RFESRIHRFVQMPSKIRPSTSPESL 1746
            +D  D D        +F+  L+KMSITPR S    FE+ +++  +MP++IRPSTSPESL
Sbjct: 570  KDMIDDDMMVSVEGADFNPDLNKMSITPRKSFKHGFETPLNQCTRMPARIRPSTSPESL 628


>ref|XP_002524432.1| transcription initiation factor ia, putative [Ricinus communis]
            gi|223536316|gb|EEF37967.1| transcription initiation
            factor ia, putative [Ricinus communis]
          Length = 640

 Score =  566 bits (1458), Expect = e-158
 Identities = 313/601 (52%), Positives = 405/601 (67%), Gaps = 19/601 (3%)
 Frame = +1

Query: 1    QLVAVIHHKERLVAEEVALLVTCLKAVTGAVSCINIVHHGTLLAAIFGXXXXXXXXXXXX 180
            QLV V+HH +RL  ++VALL+T LKA++GAVS I+  HH  LL +IFG            
Sbjct: 49   QLVGVMHHSQRLTPDDVALLLTSLKALSGAVSYIDECHHDRLLQSIFGMSIWNYGPDVME 108

Query: 181  XXXXXXX-----NGEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRV 345
                        NG+Y+D CL+MLV NF+PP       Y +++LK PRG AKK QVL R+
Sbjct: 109  ALLELIIALAASNGKYIDPCLKMLVTNFVPPM------YLIDILKLPRGQAKKEQVLSRL 162

Query: 346  HSTLKDIANVVPLSPLRLE-KIVRD--RMPNIYTKEAF---------IVMYVENMLRLEG 489
            H+ L+DIA+++P++  RL  ++V +  R+P  + K+ +           +YVENMLRLE 
Sbjct: 163  HTALEDIAHLIPMAASRLSTEVVSEIQRIPTTFKKDQYHEKDRVKYRTEIYVENMLRLES 222

Query: 490  GAMGELVGSTILVSLVDRLIELDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIE-PDS 666
            GA+ E VGS +L+++VD+LI+LDV I WD+IL+DD  KG+F +ELED +  +D  E  D 
Sbjct: 223  GAIREFVGSRMLMAVVDKLIDLDVAIGWDDILRDDSCKGIFAIELEDADEVSDDDEYNDY 282

Query: 667  NELTREALIQRFFCGNLVAEKLDSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTA 846
             EL R  L  +    N+ A+ LDSLMV  FEH++ C+ + RL  VFE LL SF  TIL  
Sbjct: 283  GELPR-TLSHKSLGENVAADLLDSLMVRIFEHLELCANNKRLNDVFETLLDSFMLTILNT 341

Query: 847  YKAKFTQFVMFYACSLDPENCGKMFANVLVNIFVSGLNPEWRMSAVAYLASYLARAKFVP 1026
            YK+KF QFVMFYAC+LDPENCG  FA  L + F  G NP  RMSAVAYLASYLARAKF+P
Sbjct: 342  YKSKFAQFVMFYACALDPENCGVEFAERLRDRFTYGENPLTRMSAVAYLASYLARAKFLP 401

Query: 1027 ISFVAAMLDSVVNWCFLYCKNVDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKS 1206
            I+FVA+ L  +V+WC  YC+N DGD+NPK+H+VFY+GCQA +YVLCFRM  M+ +P LKS
Sbjct: 402  IAFVASTLKRLVDWCSEYCRNQDGDMNPKAHRVFYSGCQAILYVLCFRMSSMMDIPWLKS 461

Query: 1207 QLLLMRIEDILGHPLKPLQVCLPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFG 1386
            QLL M +E I+ H L PL+VCLPSIVEEFL+  K   +F+  Q+     +LESE S+ FG
Sbjct: 462  QLLHMPLEQIMKHKLGPLKVCLPSIVEEFLKQAKAAHLFTTSQTSSFEDVLESEFSKDFG 521

Query: 1387 GMERFDMFFPFDPCLLRKCDR-YIRPNYVYWSMVRSTYXXXXXXXXXXXXVAEAYGGENG 1563
            G+ER DMFFPFDPCLLR CDR +IRPN+VYW  VR+TY            +AE +   NG
Sbjct: 522  GLERLDMFFPFDPCLLRTCDRSFIRPNFVYWKDVRTTY-GSDEEDSSDEDIAEDFTDING 580

Query: 1564 MSIPDDGSGRSYDEDNSDADEFDYSLDKMSITPRDSRFESRIHRFVQMPSKIRPSTSPES 1743
             S  ++G   S D  + D DEFDY+++KMSITP+ +RF  R    +QMPSKIRPSTSPES
Sbjct: 581  GSYMEEGMATSLDGQHLDLDEFDYAMNKMSITPK-NRFGIRFGERMQMPSKIRPSTSPES 639

Query: 1744 L 1746
            L
Sbjct: 640  L 640


>ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Glycine max]
            gi|571527491|ref|XP_006599254.1| PREDICTED: RNA
            polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Glycine max]
          Length = 627

 Score =  559 bits (1440), Expect = e-156
 Identities = 304/599 (50%), Positives = 405/599 (67%), Gaps = 17/599 (2%)
 Frame = +1

Query: 1    QLVAVIHHKERLVAEEVALLVTCLKAVTGAVSCINIVHHGTLLAAI-----FGXXXXXXX 165
            +LV  +H K+ L  +EVA+LVT LKA++GAVS I+ VHH +LL A+     +        
Sbjct: 46   ELVGYLHPKKNLNPDEVAILVTTLKALSGAVSYIDSVHHESLLFAVSRMSLWNYGIDIMD 105

Query: 166  XXXXXXXXXXXXNGEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRV 345
                        NG+Y+D CLEMLV +F+PP       Y ++ L+Q  G+ +K +VL RV
Sbjct: 106  ALLELIISLAASNGKYIDWCLEMLVKHFVPPF------YLLDSLRQENGIDRKNKVLSRV 159

Query: 346  HSTLKDIANVVPLSPLRLEKIVRDRMPNIYTKEAFIVMYVENMLRLEGGAMGELVGSTIL 525
            H+ LK+IA++VPL+PLRL  IV  +MP++++KE  IVMYVENMLRLE GA+GE VGS +L
Sbjct: 160  HAALKEIADLVPLAPLRLSPIVIQKMPSVFSKETEIVMYVENMLRLESGAIGETVGSIML 219

Query: 526  VSLVDRLIELDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIEPDSNELTREALIQRFF 705
             +LVDRL+ELDVEI WD ILQ+D  KG+F+MELED    AD  E   +    E L ++  
Sbjct: 220  PALVDRLLELDVEIGWDGILQEDA-KGIFEMELEDVTEFADEDENCDSMPPSELLNRKNL 278

Query: 706  CGNLVAEKLDSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAKFTQFVMFYA 885
             GNLV EKLDSLMVL F H++SC  SGRL +VF+ LL SFQ+T+L AYK+KFTQ+VMFYA
Sbjct: 279  QGNLVVEKLDSLMVLAFLHLESCQSSGRLTEVFDTLLASFQRTVLNAYKSKFTQYVMFYA 338

Query: 886  CSLDPENCGKMFANVLVNIFVSGLNPE-WRMSAVAYLASYLARAKFVPISFVAAMLDSVV 1062
            C+LDPE CG  FA VL ++F   +NP   RMSA AYLASYL RAKF+  + V  ++ S+V
Sbjct: 339  CALDPEGCGVKFAMVLADMFGCDVNPPITRMSAAAYLASYLTRAKFLSAALVTNIIQSLV 398

Query: 1063 NWCFLYCKNVDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLLLMRIEDILG 1242
            +WC+ YCK  D D+NP++H+VFY+GCQA MY+LCFRMR ++ +PRLK QLL M +E IL 
Sbjct: 399  DWCYAYCKLRDFDMNPRAHQVFYSGCQAIMYILCFRMRSLMDIPRLKLQLLNMPMEAILK 458

Query: 1243 HPLKPLQVCLPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGMERFDMFFPFD 1422
            H L PL+VCLP++V EFLR  K  ++F   +SF    +LES+ S+AFGG++R DMFFPFD
Sbjct: 459  HKLSPLKVCLPTVVVEFLRQAKAAQLFMASESFVFDDMLESDLSKAFGGIDRLDMFFPFD 518

Query: 1423 PCLLRKCDRYIRPNYVYWSMVRSTYXXXXXXXXXXXXVAEAYGGENGMSIPDDGSGRSYD 1602
            PCLL+K + YIRP++V WS VR+TY                   ++G  + DD       
Sbjct: 519  PCLLKKSESYIRPHFVRWSKVRTTYDDDDNDEL----------SDSGSEVSDDDFIDRNT 568

Query: 1603 EDNSDAD--------EFDYSLDKMSITPRDS---RFESRIHRFVQMPSKIRPSTSPESL 1746
            +D  D D        +F+  L+KMSITPR S    FE+++++  +MP++IRPSTSPESL
Sbjct: 569  KDMIDDDMMVSVEGFDFNPDLNKMSITPRKSFKHGFETQLNQCKRMPARIRPSTSPESL 627


>gb|ESW06108.1| hypothetical protein PHAVU_010G020100g [Phaseolus vulgaris]
          Length = 620

 Score =  548 bits (1413), Expect = e-153
 Identities = 298/596 (50%), Positives = 400/596 (67%), Gaps = 14/596 (2%)
 Frame = +1

Query: 1    QLVAVIHHKERLVAEEVALLVTCLKAVTGAVSCINIVHHGTLLAAI-----FGXXXXXXX 165
            +LV  +H K+ L  +EVA+LVT L+A++GAV CI+  HH +LL A+     +        
Sbjct: 46   ELVGYLHPKKNLNPDEVAILVTTLRALSGAVCCIDPNHHESLLFAVSRMSLWNYGTEVMD 105

Query: 166  XXXXXXXXXXXXNGEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRV 345
                        NG+Y+D CLEMLV +F+PP       Y ++ L    G+ +K +VL RV
Sbjct: 106  ALLELIISLAASNGKYIDWCLEMLVKHFVPPF------YLIDSLNNENGIDRKNKVLSRV 159

Query: 346  HSTLKDIANVVPLSPLRLEKIVRDRMPNIYTKEAFIVMYVENMLRLEGGAMGELVGSTIL 525
            H+ LK+IA++VPL+PLRL  IV   MPN+++KE  IV+Y ENM +LEGGA+GE+VG+TIL
Sbjct: 160  HAALKEIADLVPLAPLRLCPIVVQNMPNVFSKEREIVIYFENMFKLEGGAIGEIVGATIL 219

Query: 526  VSLVDRLIELDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIEPDSNELTREALIQRFF 705
             +LVDRL+ELDVEI WD ILQ+D  +G+FDMELED    AD  +   N    E L ++  
Sbjct: 220  PALVDRLLELDVEIGWDGILQED-SRGIFDMELEDIIKLADEDDNCHNMPQSELLNRKNL 278

Query: 706  CGNLVAEKLDSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAKFTQFVMFYA 885
             GN V EKLDSL+VL   H++SC  SGRL +VF++LL SFQKT+L AYK+KFTQFVMFYA
Sbjct: 279  QGNQVVEKLDSLIVLALLHLESCQSSGRLTEVFDVLLPSFQKTVLNAYKSKFTQFVMFYA 338

Query: 886  CSLDPENCGKMFANVLVNIFVSGLNPE-WRMSAVAYLASYLARAKFVPISFVAAMLDSVV 1062
            C+LDPE CG  FA VL ++F S LNP   RMSAVAYLASYL+RAKF+  + V  ++ S+V
Sbjct: 339  CALDPEGCGVKFAMVLADMFASDLNPPITRMSAVAYLASYLSRAKFLSAALVTTIIQSLV 398

Query: 1063 NWCFLYCKNVDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLLLMRIEDILG 1242
            + C+ YCK  D D+NP++H+VFY+GCQA MY++CFRM+ ++ VPRLK QLL M +E I  
Sbjct: 399  DLCYAYCKFRDSDLNPRAHQVFYSGCQAIMYIMCFRMKSLMDVPRLKLQLLNMPMEAIWK 458

Query: 1243 HPLKPLQVCLPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGMERFDMFFPFD 1422
            H L PL+VCLP++V EFLR  K  ++F   +SF    +LES+ S+AFGGM+R DMFFPFD
Sbjct: 459  HKLSPLKVCLPTVVVEFLRQAKAAKLFMASESFVFDDMLESDLSKAFGGMDRLDMFFPFD 518

Query: 1423 PCLLRKCDRYIRPNYVYWSMVRSTYXXXXXXXXXXXXVAEAYGGENGMSIPDDGSGRSYD 1602
            PCLL+K + YIRP++V WS VR+TY            + E    ++G  + DD    +  
Sbjct: 519  PCLLKKSESYIRPHFVRWSKVRTTY------DEDDDDIGEV--SDSGSEVSDDDFVDTNT 570

Query: 1603 EDNSDAD--------EFDYSLDKMSITPRDSRFESRIHRFVQMPSKIRPSTSPESL 1746
             D  D D        +F+  L+KMSITP++S       ++ +MP++IRPSTSPESL
Sbjct: 571  RDMIDDDLMVTVEDLDFNPDLNKMSITPKNSL------KYGRMPARIRPSTSPESL 620


>ref|XP_002307198.2| RNA polymerase 1 specific transcription initiation factor RRN3 family
            protein [Populus trichocarpa] gi|550338523|gb|EEE94194.2|
            RNA polymerase 1 specific transcription initiation factor
            RRN3 family protein [Populus trichocarpa]
          Length = 637

 Score =  538 bits (1385), Expect = e-150
 Identities = 299/598 (50%), Positives = 398/598 (66%), Gaps = 16/598 (2%)
 Frame = +1

Query: 1    QLVAVIHHKERLVAEEVALLVTCLKAVTGAVSCINIVHHGTLLAAIFGXXXXXXXXXXXX 180
            QLV V+HH++R   ++VALL+T LKA++GAVS IN V H +LL +IFG            
Sbjct: 53   QLVGVLHHRDRSAPDKVALLLTSLKALSGAVSYINDVDHVSLLQSIFGMSMWNCAPDVMD 112

Query: 181  XXXXXXX-----NGEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRV 345
                        NG+YVDLCL+MLV NFMPP          ++L+ PRG AKK QVL RV
Sbjct: 113  ALLELIICLAASNGKYVDLCLDMLVNNFMPPMES-------DMLRHPRGQAKKDQVLPRV 165

Query: 346  HSTLKDIANVVPLSPLRLEKIVRDRMPNIYTKE-------AFIVMYVENMLRLEGGAMGE 504
            H+ L+ I ++VPL+ L+L   V  + P  + K+         + +Y++NML LEGGA+ E
Sbjct: 166  HTGLEVIVDLVPLAALKLSTNVVQKRPMFFRKDFNMDRLKCRMEIYLKNMLMLEGGAIRE 225

Query: 505  LVGSTILVSLVDRLIELDVEIAWDEILQDDFHKGMFDMELEDFEGHA-DHIEPDSNELTR 681
             VG ++LV +V+ ++ELDV I WDE+L+DD  KG+F MELED E  A D  + +  EL  
Sbjct: 226  FVGHSMLVEVVNMMLELDVAIGWDELLRDDPSKGIFTMELEDEEEEAGDDGQANDGELP- 284

Query: 682  EALIQRFFCGNLVAEKLDSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAKF 861
              L  R    N+ A+ LDSLM+   EH+++C++  RL +VFE LL SF  TIL  YK+KF
Sbjct: 285  STLTLRNLGKNVTADLLDSLMIQFLEHLEACADKKRLSEVFETLLSSFMATILNTYKSKF 344

Query: 862  TQFVMFYACSLDPENCGKMFANVLVNIFVSGLNPE-WRMSAVAYLASYLARAKFVPISFV 1038
            +QF +FYAC+LDPENCG  FA  LV++F+S  NP   RMSAVAYL+SYLAR KF+  +FV
Sbjct: 345  SQFTIFYACALDPENCGVKFAQTLVDLFISTCNPPVTRMSAVAYLSSYLARGKFLSAAFV 404

Query: 1039 AAMLDSVVNWCFLYCKNVDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLLL 1218
              ML  +V+WC  YC+  D D+NPK+H+VFY+ CQ  MYVLCF M+ ++ VP LKSQLLL
Sbjct: 405  MNMLKRLVDWCLRYCEEQDSDMNPKAHQVFYSACQGIMYVLCFHMKSIMNVPTLKSQLLL 464

Query: 1219 MRIEDILGHPLKPLQVCLPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGMER 1398
            M IE IL H L PL+VCLPSIV EFL+  K   +F++ ++F    LLES+ SR FGG+ER
Sbjct: 465  MPIEPILKHKLGPLEVCLPSIVNEFLKQAKAAHLFTISKAFIFEDLLESDLSRDFGGLER 524

Query: 1399 FDMFFPFDPCLLRKCDR-YIRPNYVYWSMVRSTYXXXXXXXXXXXXVAEAYGGENGMSIP 1575
             DMFFPFDPCLL+KCDR +IRPN++YW+ V++TY            +A+ +G  N  +  
Sbjct: 525  LDMFFPFDPCLLKKCDRGFIRPNFIYWNHVKTTY-DDDEEDSSDEDIADDFGVLNEENFM 583

Query: 1576 DDGSGRSYDEDNSDADEFDYSLDKMSITPRDSRFESRIH-RFVQMPSKIRPSTSPESL 1746
            ++G  RS+D+D  D DEFDY ++KMSITP+++   S  H    +MPSKIRPSTSPESL
Sbjct: 584  EEGMARSFDQD-IDLDEFDYVMNKMSITPKNT---SGFHFGGERMPSKIRPSTSPESL 637


>ref|XP_006483561.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            rrn3-like isoform X3 [Citrus sinensis]
          Length = 534

 Score =  530 bits (1365), Expect = e-147
 Identities = 279/495 (56%), Positives = 356/495 (71%), Gaps = 9/495 (1%)
 Frame = +1

Query: 1    QLVAVIHHKERLVAEEVALLVTCLKAVTGAVSCINIVHHGTLLAAIFGXXXXXXXXXXXX 180
            QLVAV+H   RL  +  ALL T LKA++GAVS I+I HH +LL +IFG            
Sbjct: 46   QLVAVMHLSGRLDPDNRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDIMD 105

Query: 181  XXXXXXXN-----GEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRV 345
                   +     G+YVD CL MLV NF PPS      YF++ LK+P GL +K QVL RV
Sbjct: 106  ALKGLIISLAASSGKYVDSCLTMLVGNFTPPS------YFLDKLKEPHGLERKHQVLSRV 159

Query: 346  HSTLKDIANVVPLSPLRLEKIVRDRMPNIYTKEA---FIVMYVENMLRLEGGAMGELVGS 516
            H+ LK I ++VPL+P+RL  IV  RMP ++ K      IV+Y ENML+LE  AMGELV S
Sbjct: 160  HAALKSIFDLVPLAPMRLLPIVVQRMPTVHNKHERLKLIVVYTENMLKLESSAMGELVRS 219

Query: 517  TILVSLVDRLIELDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIEPDSNELTREALIQ 696
            T+L+++VDRLI+LD+EI WD+IL DDF KG+F+MELED E  AD  E   +EL   ++ +
Sbjct: 220  TLLMAVVDRLIDLDMEIGWDDILHDDFSKGIFEMELEDVEEAADDAEQVGDELPSGSISR 279

Query: 697  RFFCGNLVAEKLDSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAKFTQFVM 876
            +   GNL+AE LDSL+VLTFEH++SC  +GRL++VFEILLQSFQ T+L AYK+KF QFVM
Sbjct: 280  KSLSGNLIAELLDSLLVLTFEHLESCEGTGRLIEVFEILLQSFQITVLNAYKSKFAQFVM 339

Query: 877  FYACSLDPENCGKMFANVLVNIFVSGLNPE-WRMSAVAYLASYLARAKFVPISFVAAMLD 1053
            FYAC+LDPENCG  FA +L ++FVSGL P   RMS+V+YLASYL+RA+F+   F+ ++L 
Sbjct: 340  FYACALDPENCGLRFATMLADVFVSGLYPPLTRMSSVSYLASYLSRARFLSPCFIVSLLK 399

Query: 1054 SVVNWCFLYCKNVDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLLLMRIED 1233
             +V+WC  YC    G+INPK+H+VFY+GCQA MYVLCFRMR ++ VPRLKSQLLLM +E 
Sbjct: 400  RLVDWCLEYCNIPGGNINPKAHRVFYSGCQAIMYVLCFRMRSIMDVPRLKSQLLLMPLET 459

Query: 1234 ILGHPLKPLQVCLPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGMERFDMFF 1413
            +L H L PL+VCLPS+V EFL+  K  R+F++ ++F    LLESE SR FGG+ER DMFF
Sbjct: 460  VLKHNLNPLKVCLPSVVSEFLQQSKAARLFTVSETFIFNDLLESELSRDFGGLERLDMFF 519

Query: 1414 PFDPCLLRKCDRYIR 1458
            PFDPCLL+K DR  R
Sbjct: 520  PFDPCLLKKSDRQQR 534


>gb|EMJ05293.1| hypothetical protein PRUPE_ppa002914mg [Prunus persica]
          Length = 622

 Score =  517 bits (1331), Expect = e-144
 Identities = 294/585 (50%), Positives = 385/585 (65%), Gaps = 12/585 (2%)
 Frame = +1

Query: 28   ERLVAEEVALLVTCLKAVTGAVSCINIVHHGTLLAAIF-----GXXXXXXXXXXXXXXXX 192
            E L A EVA+LVT LKA+ GAV+ I+ V H  LL+AIF                      
Sbjct: 54   EELGANEVAMLVTNLKALAGAVAYIDNVLHNELLSAIFKMSLWNYKPDVMDALIEFIESL 113

Query: 193  XXXNGEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRVHSTLKDIAN 372
               +G+YVD CL ML   F PP + P           P+ LA+K  VL RVHS+LK IA+
Sbjct: 114  ATSSGKYVDDCLAMLTCQFFPPGSLPL----------PKILARKDGVLSRVHSSLKYIAD 163

Query: 373  VVPLSPLRLEKIVRDRMPNIY---TKEAFIVMYVENMLRLEGGAMGELVGSTILVSLVDR 543
            +VPLSP+RL  IV D  P      T    +V+YVENML+LE G +GE+V   +L  +VD 
Sbjct: 164  LVPLSPVRLVPIVLDGKPQYRFNNTSTLSLVIYVENMLKLESGVLGEVVRIPMLAGVVDL 223

Query: 544  LIELDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIEPDSNELTREALIQRFFCGNLVA 723
            L++LDVEI W++I ++D  KG+F+MELED +   D    D +EL R+ L ++   GN  A
Sbjct: 224  LLDLDVEIGWEDI-KNDSSKGIFEMELEDVDESRDDDLNDDSELPRQ-LSRKTLGGNSFA 281

Query: 724  EKLDSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAKFTQFVMFYACSLDPE 903
            EKLDSLMVLTFEH++SC  + RL+++F+ LL+SF+KT+LTAYK+KF QFV+FYACSLDP+
Sbjct: 282  EKLDSLMVLTFEHLESCQVADRLIEIFDTLLESFKKTVLTAYKSKFAQFVIFYACSLDPK 341

Query: 904  NCGKMFANVLVNIFVSGLNPEW-RMSAVAYLASYLARAKFVPISFVAAMLDSVVNWCFLY 1080
            NCG  FA +L + F    NP   RMSAVAYLASYL+RAKF+ +  VA  L+ +V+WC  Y
Sbjct: 342  NCGVTFALMLEHTFFFSTNPPLLRMSAVAYLASYLSRAKFLSVFVVAGTLERLVDWCVKY 401

Query: 1081 CKNVDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLLLMRIEDILGHPLKPL 1260
             K  D +INP++H++FY+GCQA MY+LCFRMR M+  P+LK  L+ + +E IL + L PL
Sbjct: 402  VKMQDDEINPEAHRIFYSGCQAIMYLLCFRMRSMMDDPQLKPWLVRLPLESILNNKLSPL 461

Query: 1261 QVCLPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGMERFDMFFPFDPCLLRK 1440
            +VCLPSIV EFLR  K  R+F   + F     LESE SR FGGMER DMFFPFDPCLL+K
Sbjct: 462  KVCLPSIVLEFLRQAKAARLFMTSEKFNFDDYLESELSREFGGMERLDMFFPFDPCLLKK 521

Query: 1441 CDRYIRPNYVYWSMVRSTYXXXXXXXXXXXXVAEAYGGENGMSIPDDGSGRSYDEDNSDA 1620
             D YIRPN+++WSMV+ TY            V +A+ G+N   + D G  +S +E + D 
Sbjct: 522  SDSYIRPNFIFWSMVQPTY---DDEDSSDEDVGDAFAGDNDGGM-DYGIMQSLEEQHFDF 577

Query: 1621 DEFDYSLDKMSITPRD---SRFESRIHRFVQMPSKIRPSTSPESL 1746
             E   +L+KMSITP+D   SRF   I++ ++MPS+IRPSTSPESL
Sbjct: 578  AEVGSALNKMSITPKDSLLSRFGGAINQPMRMPSRIRPSTSPESL 622


>ref|XP_004508346.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
            RRN3-like isoform X1 [Cicer arietinum]
            gi|502151248|ref|XP_004508347.1| PREDICTED: RNA
            polymerase I-specific transcription initiation factor
            RRN3-like isoform X2 [Cicer arietinum]
            gi|502151250|ref|XP_004508348.1| PREDICTED: RNA
            polymerase I-specific transcription initiation factor
            RRN3-like isoform X3 [Cicer arietinum]
          Length = 620

 Score =  516 bits (1329), Expect = e-143
 Identities = 286/591 (48%), Positives = 384/591 (64%), Gaps = 18/591 (3%)
 Frame = +1

Query: 1    QLVAVIHHKERLVAEEVALLVTCLKAVTGAVSCINIVHHGTLLAAI-----FGXXXXXXX 165
            +LV  +H K    AEE A LVT L+ ++GAVS I+  HH  LL A+     +        
Sbjct: 47   ELVRYLHPKRNPSAEEFAALVTTLRGLSGAVSYIDPAHHDALLFALSRLSLWNYATVVMD 106

Query: 166  XXXXXXXXXXXXNGEYVDLCLEMLVVNFMPPSAPPAASYFVELLKQPRGLAKKTQVLDRV 345
                        NG Y+D CLEMLV +F+PP       Y  + LK+  G+ KK +VL RV
Sbjct: 107  ALLELIVSLAVSNGMYIDWCLEMLVKHFVPPI------YLFDFLKETNGIEKKNKVLSRV 160

Query: 346  HSTLKDIANVVPLSPLRLEKIVRDRMP-NIYTKEAFIVMYVENMLRLEGGAMGELVGSTI 522
            H+ L+ I+++VPL+PLRL  IV  +MP +    E  IVMYVENMLRLE GA+GE+VG T+
Sbjct: 161  HAALEQISDLVPLAPLRLSPIVVQKMPKSCKMSEPEIVMYVENMLRLESGAIGEIVGGTM 220

Query: 523  LVSLVDRLIELDVEIAWDEILQDDFHKGMFDMELEDFEGHADHIEPDSNELTREALIQRF 702
            L +LVDRLIELDV I WD  LQ+D  K +F++ELE+    AD  E   N  T + L +  
Sbjct: 221  LPALVDRLIELDVGIGWDGNLQEDV-KCIFELELEEIAEFADEDENIFNMSTTDMLNRNN 279

Query: 703  FCGNLVAEKLDSLMVLTFEHIKSCSESGRLVQVFEILLQSFQKTILTAYKAKFTQFVMFY 882
              GN VAE+LDSL+VL F H++SC  SGR+ +VF+ILL+SF++T+L AYK+KFTQFVMFY
Sbjct: 280  LQGNKVAEQLDSLIVLIFLHLESCQSSGRIAEVFDILLKSFERTVLNAYKSKFTQFVMFY 339

Query: 883  ACSLDPENCGKMFANVLVNIFVSGLNPE-WRMSAVAYLASYLARAKFVPISFVAAMLDSV 1059
            AC+LDPE CG  FA VL  +F S +NP   RMSAVAYLASYL+RAKF+  + VA+++  +
Sbjct: 340  ACALDPEGCGVKFAMVLTEMFGSDVNPPITRMSAVAYLASYLSRAKFLSSALVASVIQRL 399

Query: 1060 VNWCFLYCKNVDGDINPKSHKVFYAGCQATMYVLCFRMRQMIAVPRLKSQLLLMRIEDIL 1239
            V+WCF YC   D D+NP++H+VFY+GCQA MY+LCFRMR ++ VPRL+ QL+ M +E +L
Sbjct: 400  VDWCFSYCMLHDVDMNPQAHQVFYSGCQAIMYLLCFRMRSLVDVPRLRMQLIKMPLEPML 459

Query: 1240 GHPLKPLQVCLPSIVEEFLRLVKVNRVFSLPQSFPDYGLLESEHSRAFGGMERFDMFFPF 1419
             H L PL+VCLPS+VEEFLR  K  R+F   +SF    LLES+ S+AFGG +R DMFFPF
Sbjct: 460  KHKLSPLKVCLPSVVEEFLRQAKAARLFMTSESFVFNDLLESDLSKAFGGTDRLDMFFPF 519

Query: 1420 DPCLLRKCDRYIRPNYVYWSMVRSTYXXXXXXXXXXXXVAEAYGGENGMSIPDDGSGRSY 1599
            DPCLL+K   Y++P++V+WS VR+TY                   ++G    DD      
Sbjct: 520  DPCLLKKSQSYLKPHFVHWSRVRTTYDTNDNDE----------DSDSGSEASDDDFVDGN 569

Query: 1600 DEDNSDAD---------EFDYSLDKMSITPRDSR--FESRIHRFVQMPSKI 1719
             +D+ D D         +FD  L+KMSITP+  +  F +++ R ++MP++I
Sbjct: 570  AKDSIDDDMIMGVEAGLDFDADLNKMSITPKSMKYGFVTQMERGMRMPTRI 620