BLASTX nr result
ID: Rehmannia22_contig00004080
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00004080
(1683 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I an... 622 e-175
ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an... 619 e-174
gb|EOY11969.1| RNA polymerase I subunit 43 isoform 1 [Theobroma ... 617 e-174
ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I an... 617 e-174
ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citr... 587 e-165
ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I an... 585 e-164
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ... 581 e-163
gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlise... 562 e-157
ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I an... 552 e-154
ref|XP_002300385.1| DNA-directed RNA polymerase family protein [... 546 e-152
ref|NP_176261.1| RNA polymerase I subunit 43 [Arabidopsis thalia... 540 e-151
gb|EOY11972.1| RNA polymerase I subunit 43 isoform 4 [Theobroma ... 540 e-151
ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I an... 538 e-150
ref|XP_004498147.1| PREDICTED: DNA-directed RNA polymerases I an... 538 e-150
ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata] ... 536 e-150
gb|EXB51013.1| DNA-directed RNA polymerases I and III subunit RP... 535 e-149
ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I an... 532 e-148
ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycin... 532 e-148
gb|EMJ06508.1| hypothetical protein PRUPE_ppa006811mg [Prunus pe... 530 e-148
ref|XP_006414263.1| hypothetical protein EUTSA_v10025407mg [Eutr... 524 e-146
>ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Solanum tuberosum]
Length = 393
Score = 622 bits (1604), Expect = e-175
Identities = 303/395 (76%), Positives = 349/395 (88%)
Frame = -2
Query: 1517 GSQNQTVGMVSEKEKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTH 1338
G+ ++ M SE S + +E+ TKV VWDLPD+PKGKLPPH++LQRTRVLC APT+
Sbjct: 2 GTATESESMDSE---STSTQEETFTKVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTN 58
Query: 1337 TESIQYSGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILI 1158
TE++ YSGAYAAMGVDNS+R E+FRNNF+VE+++L ED++EFDMIGID +LANAFRRILI
Sbjct: 59 TENVNYSGAYAAMGVDNSVRFEQFRNNFKVEIVRLEEDELEFDMIGIDPSLANAFRRILI 118
Query: 1157 AELPTMAIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMSENDEPNEKNTIVFKL 978
AELPTMAIEKVL+ANNTS+IQDEVLAHRLGLIP++VDPRLF YMSEND PNEKNTIVFKL
Sbjct: 119 AELPTMAIEKVLIANNTSIIQDEVLAHRLGLIPIEVDPRLFEYMSENDVPNEKNTIVFKL 178
Query: 977 HARCERGSPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLD 798
HARC +GS R++V ++ELKWLPNGSELIL TE S++K KTYTSF+C QDTLPEF +
Sbjct: 179 HARCTKGSDRLRVLSSELKWLPNGSELILGTEHSASSSSAKPKTYTSFSCSQDTLPEFSN 238
Query: 797 NPIVPKHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIED 618
+PI PK DI++AKLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+DIED
Sbjct: 239 DPIAPKDADIIVAKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLRDIED 298
Query: 617 GMAEELVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHF 438
AE LVKKCPV VFDIEDIGKG+KRATVARPR CTLCRECIR + WDK ++LRRV DHF
Sbjct: 299 DEAEALVKKCPVKVFDIEDIGKGKKRATVARPRICTLCRECIREEGWDKNVALRRVNDHF 358
Query: 437 IFTIESTGALPPEILFTEAVQILEEKCERVISELS 333
IFTIESTGALPPE+LFTEAV+ILEEKCERVI+ELS
Sbjct: 359 IFTIESTGALPPEVLFTEAVKILEEKCERVITELS 393
>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
protein product [Vitis vinifera]
Length = 372
Score = 619 bits (1595), Expect = e-174
Identities = 293/368 (79%), Positives = 335/368 (91%)
Frame = -2
Query: 1436 PVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRLEEFRNN 1257
P D+PDVPKG+LPPH++LQRTRVLC FDAPTHTE++QYSGAY++MGVDNSLR+++F NN
Sbjct: 5 PALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQFCNN 64
Query: 1256 FRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQDEVLAH 1077
FRVEVI+L+EDDMEFDMIGID ++ANAFRRILIAELPTMAIEKVL+ANNTS++QDEVLAH
Sbjct: 65 FRVEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDEVLAH 124
Query: 1076 RLGLIPLKVDPRLFNYMSENDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWLPNGSEL 897
RLGLIP+ DPRLF+ +SEND PNEKNTIVF LH RCERG PR+ V +NELKWLP+GSE
Sbjct: 125 RLGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLTVKSNELKWLPHGSEF 184
Query: 896 ILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEIELEAHA 717
L+TE T STSK KTYTSF+C QD+LPEF D I PKH DI+IAKLGPGQEIELEAHA
Sbjct: 185 PLATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPGQEIELEAHA 244
Query: 716 VKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIGKGRKRA 537
VKG+GKTHAKWSPVATAWYRMLPEVVLLQ+IED AEELVKKCPV VFDIEDI KG+K+A
Sbjct: 245 VKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELVKKCPVNVFDIEDIAKGKKKA 304
Query: 536 TVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQILEEKC 357
TVARPR+CTLCRECIRGDDWDK +++RRVK+HFIFTIESTGALPPE+LF EAV++LE+KC
Sbjct: 305 TVARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVKVLEDKC 364
Query: 356 ERVISELS 333
ERVI+ELS
Sbjct: 365 ERVITELS 372
>gb|EOY11969.1| RNA polymerase I subunit 43 isoform 1 [Theobroma cacao]
Length = 383
Score = 617 bits (1590), Expect = e-174
Identities = 292/374 (78%), Positives = 337/374 (90%)
Frame = -2
Query: 1454 QKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRL 1275
++ K +WDLPDVP G+LPPHL+LQRTRVLC DAP HTES+ YSGAYA+MGVDNSLRL
Sbjct: 10 EEKKKFSIWDLPDVPAGQLPPHLELQRTRVLCNKDAPIHTESVLYSGAYASMGVDNSLRL 69
Query: 1274 EEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQ 1095
+ F +NFRVEV++LTE+DMEFDMIGIDAA+ANAFRRILIAELPTMAIEKVL+ANNTSV+Q
Sbjct: 70 DHFCHNFRVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVVQ 129
Query: 1094 DEVLAHRLGLIPLKVDPRLFNYMSENDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWL 915
DEVLAHRLGLIP+ VDPRLF YMSEND+PNEKNTIVFKLH C+RGSPRI V ++ELKWL
Sbjct: 130 DEVLAHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRITVKSDELKWL 189
Query: 914 PNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEI 735
PNGSELI + K DS SK +TYTSF+C QDTLPEF +NPI PK+ DI+I+KLGPGQEI
Sbjct: 190 PNGSELIKESRKVASDSASKPETYTSFSCSQDTLPEFANNPIAPKYPDIIISKLGPGQEI 249
Query: 734 ELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIG 555
ELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+++ED +AE L KCPV VFDIED+G
Sbjct: 250 ELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDDLAEGLKSKCPVNVFDIEDLG 309
Query: 554 KGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQ 375
KG+KRATVARPR+CTLCRECIR ++W+K +++ RVKDHFIFTIESTGALPPE+LFTEAV+
Sbjct: 310 KGKKRATVARPRACTLCRECIRDEEWEKRVAIHRVKDHFIFTIESTGALPPEVLFTEAVK 369
Query: 374 ILEEKCERVISELS 333
ILE+KCERVI+ELS
Sbjct: 370 ILEDKCERVITELS 383
>ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Solanum lycopersicum]
Length = 393
Score = 617 bits (1590), Expect = e-174
Identities = 298/393 (75%), Positives = 345/393 (87%), Gaps = 4/393 (1%)
Frame = -2
Query: 1499 VGMVSEKEKSET----MKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTE 1332
+G +E E ++ +E+ TKV VWDLPD+PKGKLPPH++LQRTRVLC APT+TE
Sbjct: 1 MGTATENESMDSEGTSTQEETFTKVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTE 60
Query: 1331 SIQYSGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAE 1152
++ YSGAYAAMGVDNS+R E+FR+NF+VE+++L ED++EFDMIGID +LANAFRRILIAE
Sbjct: 61 NVNYSGAYAAMGVDNSVRFEQFRDNFKVEIVRLEEDELEFDMIGIDPSLANAFRRILIAE 120
Query: 1151 LPTMAIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMSENDEPNEKNTIVFKLHA 972
LPTMAIEKVL+ANNTS+IQDEVLAHRLGLIP+KVDPRLF YMSEND PNEKNTIVFKLH
Sbjct: 121 LPTMAIEKVLIANNTSIIQDEVLAHRLGLIPIKVDPRLFEYMSENDVPNEKNTIVFKLHV 180
Query: 971 RCERGSPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNP 792
RC +GS R++V ++ELKWLPNGSELIL TE S++K KTYTSF+C QDT PEF D P
Sbjct: 181 RCTKGSDRLRVLSSELKWLPNGSELILGTEHSASSSSAKPKTYTSFSCSQDTRPEFSDEP 240
Query: 791 IVPKHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGM 612
I PK DI++AKLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEV+LL+DIED
Sbjct: 241 IAPKDADIIVAKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLRDIEDDE 300
Query: 611 AEELVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIF 432
AE LVKKCP+ VFDIEDIGKG+KRATVARPR+CTLCRECIR + WDK ++LRRV DHFIF
Sbjct: 301 AEALVKKCPLKVFDIEDIGKGKKRATVARPRACTLCRECIREEGWDKNVALRRVNDHFIF 360
Query: 431 TIESTGALPPEILFTEAVQILEEKCERVISELS 333
TIESTGALPPE+LFTEAV+ILEEKCERVI+ELS
Sbjct: 361 TIESTGALPPEVLFTEAVKILEEKCERVITELS 393
>ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citrus clementina]
gi|557555856|gb|ESR65870.1| hypothetical protein
CICLE_v10008413mg [Citrus clementina]
Length = 421
Score = 587 bits (1514), Expect = e-165
Identities = 291/383 (75%), Positives = 333/383 (86%), Gaps = 1/383 (0%)
Frame = -2
Query: 1478 EKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAM 1299
E+ ET K+++ +WDLPDVP+ KLPPH++ QRTRV C DAP HTE++ YSGAYA+M
Sbjct: 42 EREETEKKKEAESFSIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASM 100
Query: 1298 GVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLV 1119
GVDNSL+L+ F NNFRVEVI+LT+DDMEFD+IGIDAA+ANAFRRILIAELPTMAIEKVL+
Sbjct: 101 GVDNSLQLDHFCNNFRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLI 160
Query: 1118 ANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMSENDEPNEKNTIVFKLHARCERGSPRIKV 939
ANNTSVIQDEVLAHRLGLIP+ VDPRLF YMSEND NEKNTIVFKLH CERG PR+ V
Sbjct: 161 ANNTSVIQDEVLAHRLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTV 220
Query: 938 TTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIA 759
TNELKWLPNGSEL L T KP + +SK +TYTSF+ QD LPEF +NPI P DI IA
Sbjct: 221 KTNELKWLPNGSELPLET-KPDSNPSSKPRTYTSFSSSQDLLPEFSNNPIRPML-DITIA 278
Query: 758 KLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVG 579
+LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPE+VLL+D+ED AE+LVK CPV
Sbjct: 279 RLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPVN 338
Query: 578 VFDIEDIGKGRKRATVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFTIESTGALPP 402
VFDIEDIG G+KRATVARPR+CTLCREC+R G++W+K +S+RRVKDHFIFTIESTGAL P
Sbjct: 339 VFDIEDIGSGKKRATVARPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALSP 398
Query: 401 EILFTEAVQILEEKCERVISELS 333
E LFTEAV+ILE+KCERVI+ELS
Sbjct: 399 ETLFTEAVKILEDKCERVITELS 421
>ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Citrus sinensis]
Length = 382
Score = 585 bits (1508), Expect = e-164
Identities = 290/383 (75%), Positives = 333/383 (86%), Gaps = 1/383 (0%)
Frame = -2
Query: 1478 EKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAM 1299
E+ ET K+++ +WDLPDVP+ KLPPH++ QRTRV C DAP HTE++ YSGAYA+M
Sbjct: 3 EREETEKKKEGESFSIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASM 61
Query: 1298 GVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLV 1119
GVDNSL+L+ F NNFRVEVI+LT+DDMEFD+IGIDAA+ANAFRRILIAELPTMAIEKVL+
Sbjct: 62 GVDNSLQLDHFCNNFRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLI 121
Query: 1118 ANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMSENDEPNEKNTIVFKLHARCERGSPRIKV 939
ANNTSVIQDEVLAHRLGLIP+ VDPRLF YMSEND NEKNTIVFKLH CERG PR+ V
Sbjct: 122 ANNTSVIQDEVLAHRLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTV 181
Query: 938 TTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIA 759
TNELKWLPNGSEL L T KP + SK +TYTSF+ QD+LPEF +NPI P DI IA
Sbjct: 182 KTNELKWLPNGSELPLET-KPDSNPLSKPRTYTSFSSSQDSLPEFSNNPIRPML-DITIA 239
Query: 758 KLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVG 579
+LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPE+VLL+D+ED AE+LVK CPV
Sbjct: 240 RLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPVN 299
Query: 578 VFDIEDIGKGRKRATVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFTIESTGALPP 402
VFDIEDIG G+KRATVA+PR+CTLCREC+R G++W+K +S+RRVKDHFIFTIESTGAL P
Sbjct: 300 VFDIEDIGSGKKRATVAQPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALSP 359
Query: 401 EILFTEAVQILEEKCERVISELS 333
E LFTEAV+ILE+KCERVI+ELS
Sbjct: 360 ETLFTEAVKILEDKCERVITELS 382
>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
polymerase I/III subunits, putative [Ricinus communis]
Length = 374
Score = 581 bits (1498), Expect = e-163
Identities = 283/380 (74%), Positives = 329/380 (86%)
Frame = -2
Query: 1472 SETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGV 1293
S+ ++K K +WDLPDVP G+LPPHLQLQRTRV+C DAP HT++I YSGAYA++GV
Sbjct: 3 SKQENKEKNKKFSIWDLPDVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASIGV 62
Query: 1292 DNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVAN 1113
DNSL+L+ FR+NF+VEVI+LT+DDMEFDMIGIDAA+ANAFRRILI+ELPTMAIEKVL+AN
Sbjct: 63 DNSLQLDCFRDNFKVEVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLIAN 122
Query: 1112 NTSVIQDEVLAHRLGLIPLKVDPRLFNYMSENDEPNEKNTIVFKLHARCERGSPRIKVTT 933
NTS+IQDEVLAHRLGLIP+ DPRLF Y+S ND PNEKNTIVFKLHA C+RG PR V +
Sbjct: 123 NTSLIQDEVLAHRLGLIPINADPRLFEYLSANDTPNEKNTIVFKLHASCKRGEPRRTVYS 182
Query: 932 NELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKL 753
ELKWLP GS+L+ +EK + SK TYTSF +QD +P+ P+ P D I++AKL
Sbjct: 183 EELKWLPGGSQLLKESEK----ADSKPSTYTSFTDKQDFIPK----PVSPSEDKIIVAKL 234
Query: 752 GPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVF 573
GPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+DIED +AEEL KKCPV VF
Sbjct: 235 GPGQEIELEAHAVKGLGKTHAKWSPVATAWYRMLPEVVLLEDIEDEIAEELTKKCPVNVF 294
Query: 572 DIEDIGKGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPPEIL 393
DIEDIG G+KRATVARPR+CTLCRECIRG +WDK +SLRRVKDHFIFTIESTGALPPE+L
Sbjct: 295 DIEDIGNGKKRATVARPRACTLCRECIRGGEWDKRVSLRRVKDHFIFTIESTGALPPEVL 354
Query: 392 FTEAVQILEEKCERVISELS 333
FTEAV++LE+KCERVI+ELS
Sbjct: 355 FTEAVKVLEDKCERVITELS 374
>gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlisea aurea]
Length = 364
Score = 562 bits (1448), Expect = e-157
Identities = 270/364 (74%), Positives = 316/364 (86%)
Frame = -2
Query: 1433 VWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRLEEFRNNF 1254
+WDLPDVP G+LPPHLQLQRTRVLCT +APT+TE+IQYSGAYA MGVDNSL + FR NF
Sbjct: 1 LWDLPDVPGGELPPHLQLQRTRVLCTSEAPTYTENIQYSGAYALMGVDNSLPFDSFRENF 60
Query: 1253 RVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQDEVLAHR 1074
RVE++ + E D+EFD+IGIDAA+ANAFRRILIAELPTMAIEKVL+ANNTSVI DEVL+HR
Sbjct: 61 RVEIVSMDEHDIEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIPDEVLSHR 120
Query: 1073 LGLIPLKVDPRLFNYMSENDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWLPNGSELI 894
LGLIPLKVDPR F++MSE+DEPNEKNT+VFKLH CER R V T+ELKWLPNGSEL
Sbjct: 121 LGLIPLKVDPRPFSFMSEHDEPNEKNTVVFKLHVSCERKGSRKTVKTDELKWLPNGSELR 180
Query: 893 LSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEIELEAHAV 714
L TE+P +STSK +TYTSFNC QD++PEF + + P D+I IA+LGPGQEIELEAHAV
Sbjct: 181 LETERPNINSTSKIQTYTSFNCSQDSMPEFSGSTLRPTSDEITIARLGPGQEIELEAHAV 240
Query: 713 KGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIGKGRKRAT 534
KG+GKTHAKWSPVATAWYR+LPE+ LL +I++ A+ELVKKCP VFDIED G RAT
Sbjct: 241 KGMGKTHAKWSPVATAWYRLLPEIALLDEIKNKKAKELVKKCPQKVFDIEDAGGDGIRAT 300
Query: 533 VARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQILEEKCE 354
VARPR+C+LCRECIR ++W+KL+S+RRVKDHFIF IESTGALPPE+LFTEAV+ILEEKCE
Sbjct: 301 VARPRNCSLCRECIRDEEWEKLVSVRRVKDHFIFKIESTGALPPEVLFTEAVKILEEKCE 360
Query: 353 RVIS 342
++
Sbjct: 361 NAMA 364
>ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cucumis sativus] gi|449522768|ref|XP_004168398.1|
PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC1-like [Cucumis sativus]
Length = 391
Score = 552 bits (1422), Expect = e-154
Identities = 274/368 (74%), Positives = 319/368 (86%), Gaps = 1/368 (0%)
Frame = -2
Query: 1433 VWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRLEEFRNNF 1254
+ +LPDVP KLPPH++LQRTRV C DAP HT++IQYSGA+A+MG DNSLRL+ FRNNF
Sbjct: 29 IMNLPDVPM-KLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNF 87
Query: 1253 RVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQDEVLAHR 1074
++EVI L EDD+EFDMIGID ALANAFRRILI+E+PTMAIEKVL ANNTS++QDEVLAHR
Sbjct: 88 KIEVIDLKEDDIEFDMIGIDPALANAFRRILISEVPTMAIEKVLFANNTSIVQDEVLAHR 147
Query: 1073 LGLIPLKVDPRLFNYMSENDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWLPNGSELI 894
LGL+P++VDPRLF Y S+ D PNE NTIVF+LHA CERG PR+ VT+ L WLPNGSE
Sbjct: 148 LGLVPIRVDPRLFKY-SDKDAPNENNTIVFRLHACCERGKPRLTVTSKALTWLPNGSEFP 206
Query: 893 LSTEKPTQDSTSKTKTYTSFNCRQDTL-PEFLDNPIVPKHDDILIAKLGPGQEIELEAHA 717
L ++K S SK KTYTSF+C Q+TL EF +NPI PK DI++A+LGPGQEIELEAHA
Sbjct: 207 LVSDKSV--SNSKPKTYTSFSCSQNTLSKEFSNNPIGPKDSDIILARLGPGQEIELEAHA 264
Query: 716 VKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIGKGRKRA 537
VKG+GKTHAKWSPVATAWYRMLPEVVL+++IED +AEEL KKCPV VFDIEDI G+KRA
Sbjct: 265 VKGMGKTHAKWSPVATAWYRMLPEVVLMEEIEDELAEELEKKCPVNVFDIEDIA-GKKRA 323
Query: 536 TVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQILEEKC 357
TVARPR CTLCRECIRGD W+K ++LRRVKDHFIF IESTGALPPE+LFTEAV+ILE+KC
Sbjct: 324 TVARPRDCTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC 383
Query: 356 ERVISELS 333
ER+I+ELS
Sbjct: 384 ERLIAELS 391
>ref|XP_002300385.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847643|gb|EEE85190.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 390
Score = 546 bits (1406), Expect = e-152
Identities = 273/388 (70%), Positives = 320/388 (82%), Gaps = 1/388 (0%)
Frame = -2
Query: 1493 MVSEKEKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSG 1314
M SE+E+ ++QK W+L DV +G+LPPH++ Q TRV C DAPT+TE++QYSG
Sbjct: 12 MSSEEEE----QQQKEEGFSYWNLKDVERGQLPPHIRKQGTRVYCKPDAPTNTETLQYSG 67
Query: 1313 AYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAI 1134
+YA+MGVDNSLRL+ FR NFR++VI L +D MEFDMIGIDAA+ANAFRRILI+E+PTMAI
Sbjct: 68 SYASMGVDNSLRLDSFRENFRIKVIALDKDKMEFDMIGIDAAVANAFRRILISEVPTMAI 127
Query: 1133 EKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMSENDEPNEKNTIVFKLHARCERGS 954
EKV +ANNTSVIQDEVLAHRLGLIP+KVDPRLF Y+S ND PNEKNTIV KLHARC RG
Sbjct: 128 EKVFIANNTSVIQDEVLAHRLGLIPIKVDPRLFEYLSANDTPNEKNTIVLKLHARCNRGQ 187
Query: 953 PRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHD 774
PR V + ELKWLPNGSE +EKP SK TYTSF+C QD+LPEF NPI +
Sbjct: 188 PRCSVYSQELKWLPNGSEFAKESEKP----DSKPSTYTSFSCGQDSLPEFAGNPI-STVE 242
Query: 773 DILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVK 594
DI++AKLGPGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVLL++I+ AEEL++
Sbjct: 243 DIILAKLGPGQEIELEAHAVKGMGKTHAKWSPVGTAWYRMFPEVVLLENIKGEDAEELIR 302
Query: 593 KCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIRGD-DWDKLLSLRRVKDHFIFTIEST 417
KCP GVFDIED G +K+A VA R+CTLCRECIRGD +W+K ++L RVKDHFIFTIEST
Sbjct: 303 KCPSGVFDIEDTGNAKKKAIVADSRACTLCRECIRGDEEWEKRVALHRVKDHFIFTIEST 362
Query: 416 GALPPEILFTEAVQILEEKCERVISELS 333
GALPPE+LFTEAV+ILE KCERVI+ELS
Sbjct: 363 GALPPEVLFTEAVKILEAKCERVITELS 390
>ref|NP_176261.1| RNA polymerase I subunit 43 [Arabidopsis thaliana]
gi|14423464|gb|AAK62414.1|AF386969_1 RNA polymerase
subunit (isoform B) [Arabidopsis thaliana]
gi|514324|gb|AAB00529.1| RNA polymerase subunit
[Arabidopsis thaliana] gi|2462755|gb|AAB71974.1| RNA
polymerase subunit (isoform B) [Arabidopsis thaliana]
gi|24899667|gb|AAN65048.1| RNA polymerase subunit
(isoform B) [Arabidopsis thaliana]
gi|332195585|gb|AEE33706.1| RNA polymerase I subunit 43
[Arabidopsis thaliana] gi|1586550|prf||2204246B RNA
polymerase
Length = 385
Score = 540 bits (1391), Expect = e-151
Identities = 274/393 (69%), Positives = 320/393 (81%), Gaps = 1/393 (0%)
Frame = -2
Query: 1508 NQTVGMVSEKEKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTES 1329
N+ +V+++EK E ++DLPDVP G LPPHL+LQRTRV+C D+ H +
Sbjct: 4 NEVTRIVTDEEKREAKNFN------IFDLPDVPTG-LPPHLELQRTRVVCKKDSNIHPTA 56
Query: 1328 IQYSGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAEL 1149
I +SGAY++MGVDNS+RLE F +F+V+VI LTE DM FDMIG+ A +ANAFRRIL+AEL
Sbjct: 57 ITFSGAYSSMGVDNSVRLENFSEDFKVDVISLTETDMVFDMIGVHAGIANAFRRILLAEL 116
Query: 1148 PTMAIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMSENDEPNEKNTIVFKLHAR 969
P+MAIEKV VANNTSVIQDEVLAHRLGLIP+ DPRLF Y+SEND+PNEKNTIVFKLH +
Sbjct: 117 PSMAIEKVYVANNTSVIQDEVLAHRLGLIPIAADPRLFEYLSENDQPNEKNTIVFKLHVK 176
Query: 968 CERGSPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPI 789
C +G PR KV T+ELKWLPNGSELI K + ST+ KTYTSFN QD+ PEF +NPI
Sbjct: 177 CLKGDPRRKVLTSELKWLPNGSELI----KESGGSTTTPKTYTSFNHSQDSFPEFAENPI 232
Query: 788 VPKHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMA 609
P DILIAKLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL++ E A
Sbjct: 233 RPTLKDILIAKLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLKEFEGKHA 292
Query: 608 EELVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIF 432
EELVK CP VFDIED+G+GRKRATVARPR C+LCRECIR G +W+ + LRRVK+HFIF
Sbjct: 293 EELVKVCPKKVFDIEDMGQGRKRATVARPRDCSLCRECIRDGVEWEDQVDLRRVKNHFIF 352
Query: 431 TIESTGALPPEILFTEAVQILEEKCERVISELS 333
TIESTG+ PPE+LF EAV+ILE+KCERVISELS
Sbjct: 353 TIESTGSQPPEVLFNEAVKILEDKCERVISELS 385
>gb|EOY11972.1| RNA polymerase I subunit 43 isoform 4 [Theobroma cacao]
Length = 323
Score = 540 bits (1390), Expect = e-151
Identities = 257/323 (79%), Positives = 295/323 (91%)
Frame = -2
Query: 1301 MGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVL 1122
MGVDNSLRL+ F +NFRVEV++LTE+DMEFDMIGIDAA+ANAFRRILIAELPTMAIEKVL
Sbjct: 1 MGVDNSLRLDHFCHNFRVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVL 60
Query: 1121 VANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMSENDEPNEKNTIVFKLHARCERGSPRIK 942
+ANNTSV+QDEVLAHRLGLIP+ VDPRLF YMSEND+PNEKNTIVFKLH C+RGSPRI
Sbjct: 61 IANNTSVVQDEVLAHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRIT 120
Query: 941 VTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILI 762
V ++ELKWLPNGSELI + K DS SK +TYTSF+C QDTLPEF +NPI PK+ DI+I
Sbjct: 121 VKSDELKWLPNGSELIKESRKVASDSASKPETYTSFSCSQDTLPEFANNPIAPKYPDIII 180
Query: 761 AKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPV 582
+KLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+++ED +AE L KCPV
Sbjct: 181 SKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDDLAEGLKSKCPV 240
Query: 581 GVFDIEDIGKGRKRATVARPRSCTLCRECIRGDDWDKLLSLRRVKDHFIFTIESTGALPP 402
VFDIED+GKG+KRATVARPR+CTLCRECIR ++W+K +++ RVKDHFIFTIESTGALPP
Sbjct: 241 NVFDIEDLGKGKKRATVARPRACTLCRECIRDEEWEKRVAIHRVKDHFIFTIESTGALPP 300
Query: 401 EILFTEAVQILEEKCERVISELS 333
E+LFTEAV+ILE+KCERVI+ELS
Sbjct: 301 EVLFTEAVKILEDKCERVITELS 323
>ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cicer arietinum]
Length = 388
Score = 538 bits (1387), Expect = e-150
Identities = 268/391 (68%), Positives = 322/391 (82%), Gaps = 4/391 (1%)
Frame = -2
Query: 1493 MVSEKEKSETMKEQKTTKVP--VWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQY 1320
M S E+ E K + + +L DVP KL PHL+L +TRV+C+ DAP HT++I Y
Sbjct: 1 MSSSDEEQEQKKNDNGGGILDFIMNLEDVPS-KLSPHLELIKTRVVCSIDAPQHTDTINY 59
Query: 1319 SGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTM 1140
SGAYAA+GVDNS+RL+ F NF+VEV KLT+DD+EFDMIGID +LANAFRRILIAE+PTM
Sbjct: 60 SGAYAALGVDNSVRLDSFCRNFKVEVKKLTDDDIEFDMIGIDPSLANAFRRILIAEVPTM 119
Query: 1139 AIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMSE-NDEPNEKNTIVFKLHARCE 963
AIE+V +ANNTS+IQDEVL+HRLGLIP+ DP LF Y E NEKNTIVFKLH RCE
Sbjct: 120 AIERVYIANNTSIIQDEVLSHRLGLIPINADPTLFEYPDNAGGENNEKNTIVFKLHVRCE 179
Query: 962 RGSPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVP 783
+G PRI V ++ELKWLPNGS+LI KP ++ SK KT+TSF+C QD+LPEF P+ P
Sbjct: 180 KGQPRIIVKSDELKWLPNGSDLIADDTKP--NAGSKPKTFTSFSCSQDSLPEFSKRPLGP 237
Query: 782 KHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEE 603
+ DI++AKLGPGQEIELE HAVKGVGKTHAKWSPVATAWYRMLPEVVL++D++D +A+E
Sbjct: 238 TYPDIILAKLGPGQEIELEVHAVKGVGKTHAKWSPVATAWYRMLPEVVLMEDVKDELADE 297
Query: 602 LVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFTI 426
LV KCPV VFDIEDIGKGRKRATV +PR+CTLCRECIR G +W+ +SLRRVKDHFIFTI
Sbjct: 298 LVTKCPVNVFDIEDIGKGRKRATVVKPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTI 357
Query: 425 ESTGALPPEILFTEAVQILEEKCERVISELS 333
ESTGA+PP++LFT+AV+ILE+KCERVI+ELS
Sbjct: 358 ESTGAIPPDVLFTQAVKILEDKCERVITELS 388
>ref|XP_004498147.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cicer arietinum]
Length = 388
Score = 538 bits (1385), Expect = e-150
Identities = 264/369 (71%), Positives = 313/369 (84%), Gaps = 2/369 (0%)
Frame = -2
Query: 1433 VWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRLEEFRNNF 1254
+ +L DVP KL PHL+L +TRV+C+ DAP HT++I YSGAYAA+GVDNS+RL+ F NF
Sbjct: 23 IMNLEDVPS-KLSPHLELIKTRVVCSIDAPQHTDTINYSGAYAALGVDNSVRLDSFCQNF 81
Query: 1253 RVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQDEVLAHR 1074
+VEV KLT+DD+EFDMIGID +LANAFRRILIAE+PTMAIE+V +ANNTS+IQDEVL+HR
Sbjct: 82 KVEVKKLTDDDIEFDMIGIDPSLANAFRRILIAEVPTMAIERVYIANNTSIIQDEVLSHR 141
Query: 1073 LGLIPLKVDPRLFNYMSE-NDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWLPNGSEL 897
LGLIP+ DP LF Y E NEKNTIVFKLH RCE+G PRI V ++ELKWLPNGS+L
Sbjct: 142 LGLIPINADPTLFEYPDNAGGENNEKNTIVFKLHVRCEKGQPRITVKSDELKWLPNGSDL 201
Query: 896 ILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEIELEAHA 717
I KP ++ SK KT+TSF+C QD+LPEF P+ P + DI++AKLGPGQEIELE HA
Sbjct: 202 IADDTKP--NAGSKPKTFTSFSCSQDSLPEFSKKPLGPTNPDIILAKLGPGQEIELEVHA 259
Query: 716 VKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIGKGRKRA 537
VKGVGKTHAKWSPVATAWYRMLPEVVL +D+ D +A+ELV KCPV VFDIEDIGKGRKRA
Sbjct: 260 VKGVGKTHAKWSPVATAWYRMLPEVVLTEDVTDELADELVTKCPVNVFDIEDIGKGRKRA 319
Query: 536 TVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQILEEK 360
TV +PR+CTLCRECIR G +W+ +SLRRVKDHFIFTIESTGA+PPE+LFT+AV+ILE+K
Sbjct: 320 TVVKPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPEVLFTQAVKILEDK 379
Query: 359 CERVISELS 333
CERVI+ELS
Sbjct: 380 CERVITELS 388
>ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata]
gi|297333970|gb|EFH64388.1| ATRPAC43 [Arabidopsis lyrata
subsp. lyrata]
Length = 385
Score = 536 bits (1382), Expect = e-150
Identities = 267/368 (72%), Positives = 307/368 (83%), Gaps = 1/368 (0%)
Frame = -2
Query: 1433 VWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRLEEFRNNF 1254
++DLPDVP G LPPHL+LQRTR +C DAP H S+ YSGAYA+MGVDNS+RLE F +F
Sbjct: 23 IFDLPDVPTG-LPPHLELQRTRAVCKNDAPIHPTSVLYSGAYASMGVDNSVRLENFSEDF 81
Query: 1253 RVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQDEVLAHR 1074
+V+VI LTE M FDMIG+ A +ANAFRRIL+AELP+MAIEKV VANNTSVIQDEVLAHR
Sbjct: 82 KVDVISLTETYMVFDMIGVPAGIANAFRRILLAELPSMAIEKVFVANNTSVIQDEVLAHR 141
Query: 1073 LGLIPLKVDPRLFNYMSENDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWLPNGSELI 894
LGLIP+ DPRLF Y+SEND+PNEKNTIVFKLH +C +G PR KV T+ELKWLPNGSEL+
Sbjct: 142 LGLIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCPKGDPRRKVLTSELKWLPNGSELV 201
Query: 893 LSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEIELEAHAV 714
K + T+K KTYTSF+ QD+ P F NPI P DILIAKLGPGQEIELEAHAV
Sbjct: 202 ----KESGGLTTKPKTYTSFSHSQDSFPGFAKNPITPSFQDILIAKLGPGQEIELEAHAV 257
Query: 713 KGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIGKGRKRAT 534
KG+GKTHAKWSPVATAWYRMLPEV+LL++ E AEELVK CP VFDIED+G+GRKRAT
Sbjct: 258 KGIGKTHAKWSPVATAWYRMLPEVILLKEFEGKHAEELVKVCPKKVFDIEDMGQGRKRAT 317
Query: 533 VARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQILEEKC 357
VARPR C+LCRECIR G +W K + LRRVK+HFIFTIESTG+ PP++LF EAV+ILE+KC
Sbjct: 318 VARPRDCSLCRECIREGVEWAKQVDLRRVKNHFIFTIESTGSQPPDVLFNEAVKILEDKC 377
Query: 356 ERVISELS 333
ERVISELS
Sbjct: 378 ERVISELS 385
>gb|EXB51013.1| DNA-directed RNA polymerases I and III subunit RPAC1 [Morus
notabilis]
Length = 411
Score = 535 bits (1377), Expect = e-149
Identities = 280/411 (68%), Positives = 333/411 (81%), Gaps = 15/411 (3%)
Frame = -2
Query: 1520 RGSQNQTVG---MVSEKE-KSETMKEQKTTKVPV-------W--DLPDVPKGKLPPHLQL 1380
RG + QT+ + +E E ++ET E +++ V W L DVP GKLPPHL+
Sbjct: 4 RGVKQQTMSESTLETETETETETGTESESSSVDPKGGGGLRWLEKLSDVPMGKLPPHLEF 63
Query: 1379 QRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIG 1200
QRT V C DAP HT++IQYSGAYA++GVDNS+R++ F +NFRVEV++LTEDDMEFDMIG
Sbjct: 64 QRTHVECKADAPLHTDTIQYSGAYASLGVDNSVRMDSFCDNFRVEVMRLTEDDMEFDMIG 123
Query: 1199 IDAALANAFRRILIAELPTMAIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMSE 1020
ID ALANAFRRILI+E+PTMAIE+VL+ANNTSV+QDEVLAHRLGLIP+ VDPRLF + +
Sbjct: 124 IDPALANAFRRILISEVPTMAIERVLIANNTSVVQDEVLAHRLGLIPINVDPRLFEF-AG 182
Query: 1019 NDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWLPNGSELILSTE-KPTQDSTSKTKTY 843
N+ PNEKNTIVFKLH R + P V +NEL W P GSE +L++E + D++SK +TY
Sbjct: 183 NNTPNEKNTIVFKLHVRRKPNEPS-SVKSNELIWSPKGSEFLLASEDSKSADTSSKPRTY 241
Query: 842 TSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAW 663
TSF CRQD+LPEF +N I ++ILIAKLGPGQEIELEAHAVKG+GKTHAKWSPVATAW
Sbjct: 242 TSFTCRQDSLPEFSNNAI-KVMENILIAKLGPGQEIELEAHAVKGIGKTHAKWSPVATAW 300
Query: 662 YRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIR-G 486
YRMLPEVVLLQ++ED AEEL KCPVGVFDIEDIGKGRKRATVARPR CTLCRECIR G
Sbjct: 301 YRMLPEVVLLQEVEDEAAEELKAKCPVGVFDIEDIGKGRKRATVARPRGCTLCRECIRGG 360
Query: 485 DDWDKLLSLRRVKDHFIFTIESTGALPPEILFTEAVQILEEKCERVISELS 333
W+ +SLRR K+HFIF IESTGALPPE+LFTEAV+ILE+KCERVI++LS
Sbjct: 361 QQWEDRVSLRRRKNHFIFNIESTGALPPEVLFTEAVKILEDKCERVIADLS 411
>ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Glycine max]
Length = 393
Score = 532 bits (1371), Expect = e-148
Identities = 268/389 (68%), Positives = 317/389 (81%), Gaps = 4/389 (1%)
Frame = -2
Query: 1487 SEKEKSETMKEQKTTKVP--VWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSG 1314
S + E+M EQ + L +VP KLPPHL+L +TRVLC DAP HT+++QYSG
Sbjct: 8 SSSSEDESMSEQSNELGLDFILSLDNVPS-KLPPHLELFKTRVLCNNDAPVHTDTVQYSG 66
Query: 1313 AYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAI 1134
AYA MGVDNS+RL+ F NF+VEV +LT+ D+EFDMIGID A+ANAFRRILIAE+PTMAI
Sbjct: 67 AYAIMGVDNSVRLDSFCENFKVEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAI 126
Query: 1133 EKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMSE-NDEPNEKNTIVFKLHARCERG 957
E+V +ANNTSV+QDEVL+HRLGLIP++ DPRLF Y D+ NEKNTIVFKLH RC+ G
Sbjct: 127 ERVYIANNTSVVQDEVLSHRLGLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVG 186
Query: 956 SPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKH 777
PRI V +++LKWLPNGSEL KP ++ SK KT+TSF C QD+LPEF +N I +
Sbjct: 187 QPRITVKSDKLKWLPNGSELPCEDVKP--NAGSKPKTFTSFTCSQDSLPEFSNNSIGLTY 244
Query: 776 DDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELV 597
DI++AKLGPGQEIELEAHAVKG GKTHAKWSPVAT WYRMLPEVVLL+D+ED +AEEL
Sbjct: 245 SDIILAKLGPGQEIELEAHAVKGTGKTHAKWSPVATTWYRMLPEVVLLKDVEDELAEELK 304
Query: 596 KKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFTIES 420
KCPV VFDIEDIGKG++RA VARPR CTLCRECIR G +W+ +SLRRVK+HFIFTIES
Sbjct: 305 NKCPVNVFDIEDIGKGKRRAKVARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIES 364
Query: 419 TGALPPEILFTEAVQILEEKCERVISELS 333
TGALPPE+LFTEAV+ILE+KCERVI+ELS
Sbjct: 365 TGALPPEVLFTEAVKILEDKCERVITELS 393
>ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycine max]
gi|255637183|gb|ACU18922.1| unknown [Glycine max]
Length = 388
Score = 532 bits (1370), Expect = e-148
Identities = 268/391 (68%), Positives = 319/391 (81%), Gaps = 4/391 (1%)
Frame = -2
Query: 1493 MVSEKEKSETMKEQKTTKVP--VWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQY 1320
M S + E+M EQ + L +VP KLPPHL+L +TRVLC DAP HT+++QY
Sbjct: 1 MSSSSSEDESMSEQSNELGLDFILSLDNVPS-KLPPHLELFKTRVLCNNDAPVHTDTVQY 59
Query: 1319 SGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTM 1140
SGAYA +GVDNS+RL+ F NF+VEV +LT+ D+EFDMIGID A+ANAFRRILIAE+PTM
Sbjct: 60 SGAYAILGVDNSVRLDSFCENFKVEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTM 119
Query: 1139 AIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMSE-NDEPNEKNTIVFKLHARCE 963
AIE+V +ANNTSV+QDEVL+HRLGLIP++ DPRLF Y D+ NEKNTIVFKLH RC+
Sbjct: 120 AIERVYIANNTSVVQDEVLSHRLGLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQ 179
Query: 962 RGSPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVP 783
G PRI V +++LKWLPNGSEL KP ++ SK KT+TSF C QD+LPEF +N I
Sbjct: 180 VGQPRITVKSDKLKWLPNGSELPCEGVKP--NAGSKPKTFTSFTCSQDSLPEFSNNSIGL 237
Query: 782 KHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEE 603
+ DI++AKLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+ +ED +AEE
Sbjct: 238 TYSDIILAKLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLEAVEDELAEE 297
Query: 602 LVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHFIFTI 426
L KCPV VFDIEDIGKG++RA VARPR CTLCRECIR G +W+ +SLRRVK+HFIFTI
Sbjct: 298 LKNKCPVNVFDIEDIGKGKRRAKVARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTI 357
Query: 425 ESTGALPPEILFTEAVQILEEKCERVISELS 333
ESTGALPPE+LFTEAV+ILE+KCERVI+ELS
Sbjct: 358 ESTGALPPEVLFTEAVKILEDKCERVITELS 388
>gb|EMJ06508.1| hypothetical protein PRUPE_ppa006811mg [Prunus persica]
Length = 394
Score = 530 bits (1365), Expect = e-148
Identities = 267/395 (67%), Positives = 318/395 (80%), Gaps = 1/395 (0%)
Frame = -2
Query: 1514 SQNQTVGMVSEKEKSETMKEQKTTKVPVWDLPDVPKGKLPPHLQLQRTRVLCTFDAPTHT 1335
S N+ SE E ++++KE T + + +L DVP G+LP +++ QRTRV C DAP HT
Sbjct: 3 SDNEDTTSSSESEGADSVKENATLEF-IENLSDVPMGRLPSNIEFQRTRVDCKADAPIHT 61
Query: 1334 ESIQYSGAYAAMGVDNSLRLEEFRNNFRVEVIKLTEDDMEFDMIGIDAALANAFRRILIA 1155
++ QYSGAY++M V+NS L+ F +NFRVEVI+LTED+MEFDMIGID ALANAFRRILI+
Sbjct: 62 DTFQYSGAYSSMRVENSF-LDNFCDNFRVEVIRLTEDEMEFDMIGIDPALANAFRRILIS 120
Query: 1154 ELPTMAIEKVLVANNTSVIQDEVLAHRLGLIPLKVDPRLFNYMSENDEPNEKNTIVFKLH 975
E+PTMAIEKVL+ANNTSVIQDEVLAHRLGLIP+K DPRLF Y +EN+ +EKNTIVFKLH
Sbjct: 121 EVPTMAIEKVLIANNTSVIQDEVLAHRLGLIPIKADPRLFEY-AENNTASEKNTIVFKLH 179
Query: 974 ARCERGSPRIKVTTNELKWLPNGSELILSTEKPTQDSTSKTKTYTSFNCRQDTLPEFLDN 795
CER R+ V + EL WLPNGSE L ++ S+SK KTYTSF C QD+LPEF N
Sbjct: 180 VCCERSGQRLSVKSKELIWLPNGSEFPLESQDSKTGSSSKPKTYTSFTCSQDSLPEFSSN 239
Query: 794 PIVPKHDDILIAKLGPGQEIELEAHAVKGVGKTHAKWSPVATAWYRMLPEVVLLQDIEDG 615
PI P DILIA+LGPGQEIELEAHAVKG+GKTH+KWSPV WY+MLPE+VLL+DIED
Sbjct: 240 PIAPALGDILIARLGPGQEIELEAHAVKGIGKTHSKWSPVTPVWYKMLPEIVLLEDIEDQ 299
Query: 614 MAEELVKKCPVGVFDIEDIGKGRKRATVARPRSCTLCRECIR-GDDWDKLLSLRRVKDHF 438
AE+LV CPV VFDIEDIGKG+KRATVARPR+CTLCRECIR G W+ +SL+R KDHF
Sbjct: 300 QAEKLVAICPVKVFDIEDIGKGKKRATVARPRACTLCRECIREGKGWENAISLQRKKDHF 359
Query: 437 IFTIESTGALPPEILFTEAVQILEEKCERVISELS 333
IFTIES+G PPE+L TEAV+ILEEKC+RVIS+LS
Sbjct: 360 IFTIESSGVFPPEVLVTEAVKILEEKCDRVISDLS 394
>ref|XP_006414263.1| hypothetical protein EUTSA_v10025407mg [Eutrema salsugineum]
gi|557115433|gb|ESQ55716.1| hypothetical protein
EUTSA_v10025407mg [Eutrema salsugineum]
Length = 394
Score = 524 bits (1350), Expect = e-146
Identities = 265/383 (69%), Positives = 309/383 (80%), Gaps = 18/383 (4%)
Frame = -2
Query: 1427 DLPDVPKGKLPPHLQLQRTRVLCTFDAPTHTESIQYSGAYAAMGVDNSLRLEEFRNNFRV 1248
D PDVP +LPPHL+LQRTRVLC DAP HT S+QYSGAY +GVDNS++LE F NFRV
Sbjct: 17 DHPDVP-ARLPPHLELQRTRVLCKNDAPIHTSSVQYSGAYKFVGVDNSVKLESFSENFRV 75
Query: 1247 EVIKLTEDDMEFDMIGIDAALANAFRRILIAELPTMAIEKVLVANNTSVIQDEVLAHRLG 1068
+VI ++EFDMIGIDAA+ANAFRRIL+AELPTMAIEKV VANNTSV+QDEVLA R+G
Sbjct: 76 DVISEDGMELEFDMIGIDAAIANAFRRILLAELPTMAIEKVFVANNTSVVQDEVLAQRMG 135
Query: 1067 LIPLKVDPRLFNYMSENDEPNEKNTIVFKLHARCERGSPRIKVTTNELKWLPNGSELILS 888
LIP+ DPRLF Y+SEND+PNEKNTIVFKLHA+CE+G PR+KV T EL WLPNGSELI
Sbjct: 136 LIPIAADPRLFEYLSENDQPNEKNTIVFKLHAKCEKGEPRLKVLTKELIWLPNGSELI-- 193
Query: 887 TEKPTQDSTSKTKTYTSFNCRQDTLPEFLDNPIVPKHDDILIAKLGPGQEIELEAHAVKG 708
K + STSK +TYTSF+ QD+ PEF +NPI P + DILIAKLGPGQEIELEAHAVKG
Sbjct: 194 --KESGGSTSKPRTYTSFSRSQDSFPEFANNPITPSYPDILIAKLGPGQEIELEAHAVKG 251
Query: 707 VGKTHAKWSPVATAWYRMLPEVVLLQDIEDGMAEELVKKCPVGVFDIEDIGKGRKRATVA 528
+GKTHAKWSPVATAWYRMLPEV+LL++ E AE+LVK C VFDIED+G GRK+ATVA
Sbjct: 252 IGKTHAKWSPVATAWYRMLPEVILLKEFEGEDAEKLVKACAEKVFDIEDMGNGRKKATVA 311
Query: 527 RPRSCTLCREC-------------IRGDD-----WDKLLSLRRVKDHFIFTIESTGALPP 402
RPR CTLCREC ++G+D W ++LRRVK+HFIF IESTG+LPP
Sbjct: 312 RPRQCTLCRECLSEEFGEPIVKPILKGEDKSKREWVDNVALRRVKNHFIFKIESTGSLPP 371
Query: 401 EILFTEAVQILEEKCERVISELS 333
++LFTEAV+ILE+KCERVI+ LS
Sbjct: 372 DVLFTEAVKILEDKCERVIAVLS 394