BLASTX nr result
ID: Rehmannia22_contig00003709
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia22_contig00003709 (2669 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation spec... 1226 0.0 ref|XP_004234405.1| PREDICTED: cleavage and polyadenylation spec... 1219 0.0 ref|XP_006353867.1| PREDICTED: cleavage and polyadenylation spec... 1213 0.0 ref|XP_004140773.1| PREDICTED: cleavage and polyadenylation spec... 1179 0.0 gb|EOY23219.1| Cleavage and polyadenylation specificity factor 1... 1176 0.0 ref|XP_002517902.1| cleavage and polyadenylation specificity fac... 1174 0.0 ref|XP_006421948.1| hypothetical protein CICLE_v10004414mg [Citr... 1173 0.0 ref|XP_004499957.1| PREDICTED: cleavage and polyadenylation spec... 1172 0.0 ref|XP_006490412.1| PREDICTED: cleavage and polyadenylation spec... 1170 0.0 gb|EMJ21437.1| hypothetical protein PRUPE_ppa001928mg [Prunus pe... 1169 0.0 gb|EXC19142.1| Cleavage and polyadenylation specificity factor s... 1166 0.0 ref|XP_006587302.1| PREDICTED: cleavage and polyadenylation spec... 1163 0.0 gb|ESW24245.1| hypothetical protein PHAVU_004G114000g [Phaseolus... 1158 0.0 ref|XP_003548179.1| PREDICTED: cleavage and polyadenylation spec... 1155 0.0 ref|XP_002330904.1| predicted protein [Populus trichocarpa] 1129 0.0 ref|XP_006369487.1| Cleavage and polyadenylation specificity fac... 1129 0.0 ref|NP_197776.1| cleavage and polyadenylation specificity factor... 1120 0.0 ref|XP_002872080.1| CPSF100 [Arabidopsis lyrata subsp. lyrata] g... 1119 0.0 gb|AAF82809.1|AF283277_1 polyadenylation cleavage/specificity fa... 1118 0.0 ref|XP_006287134.1| hypothetical protein CARUB_v10000306mg [Caps... 1116 0.0 >ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2 [Vitis vinifera] gi|302143847|emb|CBI22708.3| unnamed protein product [Vitis vinifera] Length = 740 Score = 1226 bits (3172), Expect = 0.0 Identities = 604/741 (81%), Positives = 664/741 (89%), Gaps = 1/741 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PLCGVYNENPLSYLVSIDGFNFL+DCGWNDHFD S L+PL+RVAST+DAVLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSFLQPLARVASTIDAVLL 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 +HPDTLHLGALPYAMKQLGLSAPV++TEPVYRLGLLTMYD YLSRKQVS+FDLFTLDDID Sbjct: 61 AHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSDFDLFTLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQN+TRLTYSQNY++ GKGEGIVIAPH +GHLLGGTVWK+TKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQNVTRLTYSQNYHLFGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLDAIMKTLRADGKILVPVDTA 899 R LNGTVLESFVRPAVLITDAYNAL +NQP RRQRDQ+FLD I+KTLR DG +L+PVDTA Sbjct: 181 RLLNGTVLESFVRPAVLITDAYNAL-NNQPSRRQRDQEFLDVILKTLRGDGNVLLPVDTA 239 Query: 900 GRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF 1079 GRVLEL+LILEQYW QH L YPIFFLTYV+SSTIDY KSFLEWMSDSIAKSFEHTRDNAF Sbjct: 240 GRVLELMLILEQYWTQHHLNYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAF 299 Query: 1080 LMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQFA 1259 L+KHVTLLI+KSELE +PDGPKIVLASMASLE GFSHDIFVEWA D+KNLVLF+ERGQFA Sbjct: 300 LLKHVTLLISKSELEKVPDGPKIVLASMASLEAGFSHDIFVEWATDAKNLVLFSERGQFA 359 Query: 1260 TLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKASL 1439 TLARMLQ+DPPPKAVKVTMSKR+PLVGEELAAYEEEQ R +KEEALKA+L KE+E KAS Sbjct: 360 TLARMLQADPPPKAVKVTMSKRVPLVGEELAAYEEEQERIKKEEALKASLSKEDEMKASR 419 Query: 1440 GVELVPADPMIIDASIKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSEWD 1619 G + DPM+ID + P SS+ A G RD+ IDGFV P +S PMFPFY++SSEWD Sbjct: 420 GSDNKLGDPMVIDTTTPPASSDVAVPHVGGHRDILIDGFVPPSTSVAPMFPFYENSSEWD 479 Query: 1620 DFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYVKC 1799 DFGEVINP+DY+IKDEDMDQA+M++ DLNGKLDEG+A LI DTTPSKV+S+E TV VKC Sbjct: 480 DFGEVINPEDYVIKDEDMDQATMQVGDDLNGKLDEGAASLIFDTTPSKVISNELTVQVKC 539 Query: 1800 SLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQLEE 1979 LVYMDFEGRSDG SIK IL HVAPLKLVLVHGSAEATEHL+QHCLK+VCP+VYAPQ+ E Sbjct: 540 MLVYMDFEGRSDGRSIKSILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIGE 599 Query: 1980 SIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXXXH 2159 +IDVTSDLCAYKVQLSEKLMSN+LFKKLGDYE+AWVDAEVGKTESG H Sbjct: 600 TIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAEVGKTESGSLSLLPLSTPPPSH 659 Query: 2160 KTVLVGDIKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDSSQKGGGN-IQHIILE 2336 TV VGDIKMADFKQFLASKGIQVEF+GGALRCGEYVTLRKVGD+SQKGGG IQ I++E Sbjct: 660 DTVFVGDIKMADFKQFLASKGIQVEFSGGALRCGEYVTLRKVGDASQKGGGAIIQQIVME 719 Query: 2337 GPLSDEYYKIRDHLYSQFYSL 2399 GPL DEYYKIR++LYSQ+Y L Sbjct: 720 GPLCDEYYKIREYLYSQYYLL 740 >ref|XP_004234405.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like [Solanum lycopersicum] Length = 739 Score = 1219 bits (3153), Expect = 0.0 Identities = 600/741 (80%), Positives = 667/741 (90%), Gaps = 1/741 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PLCGVYNENPLSYLVSIDGFNFL+DCGWNDHFDTSLL+PLSRVASTVDAVL+ Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDTSLLQPLSRVASTVDAVLI 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 SH DT HLGALPYAMKQLGLSAP++ATEPVYRLGLLTMYD YLSRKQVSEFDLFTLDDID Sbjct: 61 SHSDTFHLGALPYAMKQLGLSAPIYATEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQN+TRLTYSQN+YMSGKGEGIVIAP +GHLLGGT W++TKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQNVTRLTYSQNHYMSGKGEGIVIAPLVAGHLLGGTTWRITKDGEDVIYAVDFNHRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLDAIMKTLRADGKILVPVDTA 899 RHLNGTVLESFVRPAVLITDA+NAL +NQPPRRQRDQ+FLDAI +TL G +L+PVDTA Sbjct: 181 RHLNGTVLESFVRPAVLITDAFNAL-NNQPPRRQRDQEFLDAIERTLNVGGNVLLPVDTA 239 Query: 900 GRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF 1079 GRVLEL+L LEQ+W Q QL+ PI+FL+YVSSSTIDY KSFLEWMSDSIAKSFEHTRDNAF Sbjct: 240 GRVLELILTLEQHWTQKQLSTPIYFLSYVSSSTIDYVKSFLEWMSDSIAKSFEHTRDNAF 299 Query: 1080 LMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQFA 1259 L++ + L+INKS LE P GPK+V+ASMASLE GFSHD+FVEWAAD KNLV+FTERGQF Sbjct: 300 LLRKIKLVINKSALEEAP-GPKVVMASMASLEAGFSHDLFVEWAADPKNLVMFTERGQFG 358 Query: 1260 TLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKASL 1439 TLAR+LQSDPPPKAVKVTMS+RIPLVGEELAAYEEEQNR ++EEALKATL+KEEE+KAS+ Sbjct: 359 TLARILQSDPPPKAVKVTMSRRIPLVGEELAAYEEEQNRIKREEALKATLVKEEESKASV 418 Query: 1440 GVELVPADPMIIDASIKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSEWD 1619 G E+V DPM +D ++ PSSNA+GL GAF+DV IDGFV+ SS PMFPFYD++SEWD Sbjct: 419 GAEVVTDDPMAVDTNVTHPSSNASGLHSGAFKDVLIDGFVTTSSSIAPMFPFYDNTSEWD 478 Query: 1620 DFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYVKC 1799 DFGEVINPDDY++KD++M+Q+ M +DGDLNGKLDEGSA LILDTTPSKV SSE TV VKC Sbjct: 479 DFGEVINPDDYVVKDDNMEQSFMHVDGDLNGKLDEGSANLILDTTPSKVESSELTVQVKC 538 Query: 1800 SLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQLEE 1979 SL+YMDFEGRSDG SIK IL HVAPLKLVLVHGSAEATEHL+QHCLK+VCP VYAPQLEE Sbjct: 539 SLLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPQVYAPQLEE 598 Query: 1980 SIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXXXH 2159 +IDVTSDLCAYKVQLSEKLMS +LFKKLGDYEIAWVDAEVGKTE+ H Sbjct: 599 TIDVTSDLCAYKVQLSEKLMSQVLFKKLGDYEIAWVDAEVGKTENDMFSLLPLSGPSPPH 658 Query: 2160 KTVLVGDIKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDSSQK-GGGNIQHIILE 2336 KTVLVGD+KM+DFKQFLASKG+QVEF GGALRCGEYVT+RKVGD+SQK GG IQ I+LE Sbjct: 659 KTVLVGDLKMSDFKQFLASKGVQVEFGGGALRCGEYVTIRKVGDASQKVGGAAIQQIVLE 718 Query: 2337 GPLSDEYYKIRDHLYSQFYSL 2399 GPLS+EYYKIR++LYS FYSL Sbjct: 719 GPLSEEYYKIREYLYSHFYSL 739 >ref|XP_006353867.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like [Solanum tuberosum] Length = 739 Score = 1213 bits (3139), Expect = 0.0 Identities = 597/741 (80%), Positives = 666/741 (89%), Gaps = 1/741 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PLCGV+NENPLSYLVSIDGFNFL+DCGWNDHFDTSLL+PLSRVASTVDAVL+ Sbjct: 1 MGTSVQVTPLCGVFNENPLSYLVSIDGFNFLVDCGWNDHFDTSLLQPLSRVASTVDAVLI 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 SH DT HLGALPYAMKQLGLSAP++ATEPVYRLGLLTMYD YLSRKQVSEFDLFTLDDID Sbjct: 61 SHSDTFHLGALPYAMKQLGLSAPIYATEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQN+TRLTYSQN+YMSGKGEGIVIAP +GHLLGGT W++TKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQNVTRLTYSQNHYMSGKGEGIVIAPLVAGHLLGGTTWRITKDGEDVIYAVDFNHRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLDAIMKTLRADGKILVPVDTA 899 RHLNGTVLESFVRPAVLITDA+NAL +NQPPRRQRDQ+FLDAI +T+ G +L+PVDTA Sbjct: 181 RHLNGTVLESFVRPAVLITDAFNAL-NNQPPRRQRDQEFLDAIERTVNVGGNVLLPVDTA 239 Query: 900 GRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF 1079 GRVLEL+L LEQ+W Q QL+ PI+FL+YVSSSTIDY KSFLEWMSDSIAKSFEHTRDNAF Sbjct: 240 GRVLELILTLEQHWTQKQLSTPIYFLSYVSSSTIDYVKSFLEWMSDSIAKSFEHTRDNAF 299 Query: 1080 LMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQFA 1259 L++ + L+INKS LE P G K+V+ASMASLE GFSHD+FVEWAAD KNLV+FTERGQF Sbjct: 300 LLRKIKLVINKSALEEAP-GSKVVMASMASLEAGFSHDLFVEWAADPKNLVMFTERGQFG 358 Query: 1260 TLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKASL 1439 TLAR+LQSDPPPKAVKVTMS+RIPLVGEELAAYEEEQNR ++EEALKATL+KEEE+KAS+ Sbjct: 359 TLARILQSDPPPKAVKVTMSRRIPLVGEELAAYEEEQNRIKREEALKATLVKEEESKASV 418 Query: 1440 GVELVPADPMIIDASIKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSEWD 1619 G E+V DPM +D ++ PSSNA+GL GAF+DV IDGFV+ SS PMFPFYD++SEWD Sbjct: 419 GAEVVTNDPMAVDTNVTHPSSNASGLHSGAFKDVLIDGFVTTSSSVAPMFPFYDNTSEWD 478 Query: 1620 DFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYVKC 1799 DFGEVINPDDY++KD++M+Q+ M +DGDLNGKLDEGSA LILDTTPSKV SSE TV VKC Sbjct: 479 DFGEVINPDDYVVKDDNMEQSLMHVDGDLNGKLDEGSANLILDTTPSKVESSELTVQVKC 538 Query: 1800 SLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQLEE 1979 SL+YMDFEGRSDG SIK IL HVAPLKLVLVHGSAEATEHL+QHCLK+VCP VYAPQLEE Sbjct: 539 SLLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPQVYAPQLEE 598 Query: 1980 SIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXXXH 2159 +IDVTSDLCAYKVQLSEKLMS +LFKKLGDYEIAWVDAEVGKTE+ H Sbjct: 599 TIDVTSDLCAYKVQLSEKLMSQVLFKKLGDYEIAWVDAEVGKTENDMFSLLPLSGPAPPH 658 Query: 2160 KTVLVGDIKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDSSQK-GGGNIQHIILE 2336 KTVLVGD+KM+DFKQFLASKG+QVEF GGALRCGEYVT+RKVGD+SQK GG IQ I+LE Sbjct: 659 KTVLVGDLKMSDFKQFLASKGVQVEFGGGALRCGEYVTIRKVGDASQKVGGAAIQQIVLE 718 Query: 2337 GPLSDEYYKIRDHLYSQFYSL 2399 GPLS+EYYKIR++LYS FYSL Sbjct: 719 GPLSEEYYKIREYLYSHFYSL 739 >ref|XP_004140773.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like [Cucumis sativus] Length = 738 Score = 1179 bits (3051), Expect = 0.0 Identities = 582/743 (78%), Positives = 660/743 (88%), Gaps = 3/743 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PLCGVYNENPLSYLVS+D FNFLIDCGWNDHFD +LL+PLSRVAST+DAVL+ Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 SHPDTLHLGALPYAMKQLGLSAPVF+TEPVYRLGLLTMYD +++RKQVSEFDLFTLDDID Sbjct: 61 SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQ +TRLTYSQN+++SGKGEGIVIAPH +GHLLGGT+WK+TKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLDAIMKTLRADGKILVPVDTA 899 RHLNGT+LESFVRPAVLITDAYNAL +NQP RRQ+D++F D I KTLRA+G +L+PVDTA Sbjct: 181 RHLNGTILESFVRPAVLITDAYNAL-NNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 239 Query: 900 GRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF 1079 GRVLEL+ ILE YWE+ L YPIFFLTYV+SSTIDY KSFLEWMSD+IAKSFEHTR+NAF Sbjct: 240 GRVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAF 299 Query: 1080 LMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQFA 1259 L+KHVTLLINKSEL+N PDGPK+VLASMASLE G+SHDIFV+WA D+KNLVLF+ERGQF Sbjct: 300 LLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFG 359 Query: 1260 TLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKASL 1439 TLARMLQ+DPPPKAVKVT+SKR+PL G+EL AYEEEQNRK KEEALKA+L+KEE++KAS Sbjct: 360 TLARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRK-KEEALKASLLKEEQSKASH 418 Query: 1440 GVELVPADPMIIDAS--IKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSE 1613 G + DPMIIDAS + P ++ G GA+RD+ IDGFV P + PMFPFY+++S Sbjct: 419 GADNDTGDPMIIDASSNVAPDVGSSHG---GAYRDILIDGFVPPSTGVAPMFPFYENTSA 475 Query: 1614 WDDFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYV 1793 WDDFGEVINPDDY+IKDEDMDQA+M GD++GKLDE +A LILD PSKVVS+E TV V Sbjct: 476 WDDFGEVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQV 535 Query: 1794 KCSLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQL 1973 KCSL YMDFEGRSDG SIK IL HVAPLKLVLVHG+AEATEHL+QHCLKNVCP+VYAPQ+ Sbjct: 536 KCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQI 595 Query: 1974 EESIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXX 2153 EE+IDVTSDLCAYKVQLSEKLMSN+LFKKLGDYEI W+DAEVGKTE+G Sbjct: 596 EETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPA 655 Query: 2154 XHKTVLVGDIKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDSSQKGGGN-IQHII 2330 HK+VLVGD+KMADFKQFLASKGIQVEFAGGALRCGEYVTLRKV D+SQKGGG+ Q ++ Sbjct: 656 PHKSVLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVV 715 Query: 2331 LEGPLSDEYYKIRDHLYSQFYSL 2399 +EGPL ++YYKIR+ LYSQFY L Sbjct: 716 IEGPLCEDYYKIRELLYSQFYLL 738 >gb|EOY23219.1| Cleavage and polyadenylation specificity factor 100 isoform 1 [Theobroma cacao] Length = 742 Score = 1176 bits (3042), Expect = 0.0 Identities = 575/743 (77%), Positives = 659/743 (88%), Gaps = 3/743 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PLCGVYNENPLSYLVSIDGFNFLIDCGWND FD SLL+PLSRVA T+DAVLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDPSLLQPLSRVAPTIDAVLL 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 SHPDTLHLGALPYAMKQ GLSAPV++TEPV+RLGLLTMYD YLSRKQVSEF+LFTLDDID Sbjct: 61 SHPDTLHLGALPYAMKQFGLSAPVYSTEPVFRLGLLTMYDQYLSRKQVSEFELFTLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQN+TRLTYSQNY++SGKGEGIVIAPH +GHLLGGTVWK+TKDGEDVIYAVDFN RKE Sbjct: 121 SAFQNVTRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNRRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPR--RQRDQQFLDAIMKTLRADGKILVPVD 893 +HLNGTVLESFVRPAVLITDAYNAL +NQPP+ R+RD+ F+D I +TL A G +L+PVD Sbjct: 181 KHLNGTVLESFVRPAVLITDAYNAL-NNQPPKQQRERDRDFVDTISRTLEAGGNVLLPVD 239 Query: 894 TAGRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDN 1073 T GRVLELLL+LE++W L YPIFFLTYVSSSTIDY KSFLEWMSD+IAKSFE +RDN Sbjct: 240 TTGRVLELLLVLEEHWAMKSLNYPIFFLTYVSSSTIDYVKSFLEWMSDAIAKSFETSRDN 299 Query: 1074 AFLMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQ 1253 AFL++HVTLLI+K+EL+ +PDGPK+VLASMASLE GFSHDIFVEWAAD KNLVLFTERGQ Sbjct: 300 AFLLRHVTLLISKNELDKVPDGPKVVLASMASLEAGFSHDIFVEWAADVKNLVLFTERGQ 359 Query: 1254 FATLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKA 1433 F TLARMLQ+DPPPKAVKV MS+R+PLVGEEL A+EEEQNR +KEEALKA+LIKEEE+KA Sbjct: 360 FGTLARMLQADPPPKAVKVMMSRRVPLVGEELIAHEEEQNRLKKEEALKASLIKEEESKA 419 Query: 1434 SLGVELVPADPMIIDASIKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSE 1613 S+ ++ +DPM+ID + K S + G +RD+ IDGFV P +S PMFPFY+++S+ Sbjct: 420 SIVPDISSSDPMVIDTNNKHSSLDGLGQHGSGYRDILIDGFVPPSTSVAPMFPFYENASD 479 Query: 1614 WDDFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYV 1793 WDDFGEVINPDDY+IKDEDMDQA+M + GD++GK+DE SA LI+DTTPSKV+S+E TV V Sbjct: 480 WDDFGEVINPDDYVIKDEDMDQAAMHVGGDMDGKVDEASASLIVDTTPSKVISNELTVQV 539 Query: 1794 KCSLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQL 1973 K SL+YMD+EGRSDG S+K IL HVAPLKLVLVHGSAEATEHL+QHCLK+VCP+VYAPQ+ Sbjct: 540 KSSLIYMDYEGRSDGRSVKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQI 599 Query: 1974 EESIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXX 2153 EE+IDVTSDLCAYKVQLSEKLMSN+LFKKLGDYEIAWVDAEVGKTE+ Sbjct: 600 EETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTENEMLSLLPLSTPAP 659 Query: 2154 XHKTVLVGDIKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDSSQKGGGN-IQHII 2330 HK+V+VGD+K+ADFKQFLASKG++VEFAGGALRCGEYVTLRKVG +SQKGGG+ Q II Sbjct: 660 PHKSVVVGDLKLADFKQFLASKGVKVEFAGGALRCGEYVTLRKVGFASQKGGGSGTQQII 719 Query: 2331 LEGPLSDEYYKIRDHLYSQFYSL 2399 +EGPL ++YYKIRD+LYSQFY L Sbjct: 720 IEGPLCEDYYKIRDYLYSQFYLL 742 >ref|XP_002517902.1| cleavage and polyadenylation specificity factor, putative [Ricinus communis] gi|223542884|gb|EEF44420.1| cleavage and polyadenylation specificity factor, putative [Ricinus communis] Length = 740 Score = 1174 bits (3036), Expect = 0.0 Identities = 584/742 (78%), Positives = 654/742 (88%), Gaps = 2/742 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PL GVYNENPLSYL+SID FN LIDCGWNDHFD SLL+PLSRVAST+DAVLL Sbjct: 1 MGTSVQVTPLNGVYNENPLSYLISIDNFNLLIDCGWNDHFDPSLLQPLSRVASTIDAVLL 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 SH DTLHLGALPYAMKQLGLSAPV++TEPVYRLGLLTMYD YLSRK VSEFDLF+LDDID Sbjct: 61 SHSDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKAVSEFDLFSLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQNITRLTYSQN+++SGKGEGIVIAPH +GHLLGGTVWK+TKDGEDV+YAVDFNHRKE Sbjct: 121 SAFQNITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVVYAVDFNHRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLD-AIMKTLRADGKILVPVDT 896 RHLNGTVLESFVRPAVLITDAYNA LSNQPPR+QRD++FL+ I+KTL A G +L+PVDT Sbjct: 181 RHLNGTVLESFVRPAVLITDAYNA-LSNQPPRQQRDKEFLEKTILKTLEAGGNVLLPVDT 239 Query: 897 AGRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNA 1076 AGRVLELLLILEQ+W L YPIFFLTYVSSSTIDY KSFLEWMSDSIAKSFE +RDNA Sbjct: 240 AGRVLELLLILEQFWAHRLLNYPIFFLTYVSSSTIDYVKSFLEWMSDSIAKSFETSRDNA 299 Query: 1077 FLMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQF 1256 FL+KHVTLLINK+EL+N P+ PK+VLASMASLE GFSHDIFVEWAAD KNLVLFTERGQF Sbjct: 300 FLLKHVTLLINKNELDNAPNVPKVVLASMASLEAGFSHDIFVEWAADVKNLVLFTERGQF 359 Query: 1257 ATLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKAS 1436 TLARMLQ+DPPPKAVKVTMS+R+PLVG+EL AYEEEQ R +KEE L A++IKEEEAK S Sbjct: 360 GTLARMLQADPPPKAVKVTMSRRVPLVGDELIAYEEEQKRLKKEEELNASMIKEEEAKVS 419 Query: 1437 LGVELVPADPMIIDASIKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSEW 1616 G + +DPMIIDAS S +A G Q +RD+ DGFV P +S PMFPFY++++EW Sbjct: 420 HGPDSNLSDPMIIDASNNNASLDAVGSQGTGYRDILFDGFVPPSTSVAPMFPFYENTTEW 479 Query: 1617 DDFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYVK 1796 DDFGEVINPDDY+IKD+DMDQ M + GD++GK DEGSA ILDT PSKVVSSE TV VK Sbjct: 480 DDFGEVINPDDYVIKDDDMDQ-PMHVGGDIDGKFDEGSASWILDTKPSKVVSSELTVQVK 538 Query: 1797 CSLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQLE 1976 CSL+YMD+EGRSDG SIK IL HVAPLKLVLVHGSAE+TEHL+QHCLK+VCP+VYAPQ+E Sbjct: 539 CSLIYMDYEGRSDGRSIKSILAHVAPLKLVLVHGSAESTEHLKQHCLKHVCPHVYAPQIE 598 Query: 1977 ESIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXXX 2156 E+IDVTSDLCAYKVQLSEKLMSN+LFKKLGD+EIAWVDAEVGKTES Sbjct: 599 ETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDFEIAWVDAEVGKTESDALSLLPISTSAPP 658 Query: 2157 HKTVLVGDIKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDSSQKGGGN-IQHIIL 2333 HK+VLVGD+KMADFKQFLASKG+QVEFAGGALRCGEYVTLRKVG+ +QKGGG+ Q I++ Sbjct: 659 HKSVLVGDLKMADFKQFLASKGVQVEFAGGALRCGEYVTLRKVGNINQKGGGSGTQQIVI 718 Query: 2334 EGPLSDEYYKIRDHLYSQFYSL 2399 EGPL ++YYKIR++LYSQFY L Sbjct: 719 EGPLCEDYYKIREYLYSQFYLL 740 >ref|XP_006421948.1| hypothetical protein CICLE_v10004414mg [Citrus clementina] gi|568874619|ref|XP_006490411.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like isoform X1 [Citrus sinensis] gi|557523821|gb|ESR35188.1| hypothetical protein CICLE_v10004414mg [Citrus clementina] Length = 739 Score = 1173 bits (3035), Expect = 0.0 Identities = 582/742 (78%), Positives = 655/742 (88%), Gaps = 2/742 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PL GV+NENPLSYLVSIDGFNFLIDCGWNDHFD SLL+PLS+VAST+DAVLL Sbjct: 1 MGTSVQVTPLSGVFNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSKVASTIDAVLL 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 SHPDTLHLGALPYAMKQLGLSAPVF+TEPVYRLGLLTMYD YLSR+QVSEFDLFTLDDID Sbjct: 61 SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQYLSRRQVSEFDLFTLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQ++TRLTYSQNY++SGKGEGIV+APH +GHLLGGTVWK+TKDGEDVIYAVD+N RKE Sbjct: 121 SAFQSVTRLTYSQNYHLSGKGEGIVVAPHVAGHLLGGTVWKITKDGEDVIYAVDYNRRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLDAIMKTLRADGKILVPVDTA 899 +HLNGTVLESFVRPAVLITDAYNA L NQPPR+QR + F DAI KTLRA G +L+PVD+A Sbjct: 181 KHLNGTVLESFVRPAVLITDAYNA-LHNQPPRQQR-EMFQDAISKTLRAGGNVLLPVDSA 238 Query: 900 GRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF 1079 GRVLELLLILE YW +H L YPI+FLTYVSSSTIDY KSFLEWM DSI KSFE +RDNAF Sbjct: 239 GRVLELLLILEDYWAEHSLNYPIYFLTYVSSSTIDYVKSFLEWMGDSITKSFETSRDNAF 298 Query: 1080 LMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQFA 1259 L+KHVTLLINKSEL+N PDGPK+VLASMASLE GFSHDIFVEWA+D KNLVLFTERGQF Sbjct: 299 LLKHVTLLINKSELDNAPDGPKLVLASMASLEAGFSHDIFVEWASDVKNLVLFTERGQFG 358 Query: 1260 TLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKASL 1439 TLARMLQ+DPPPKAVKVTMS+R+PLVGEEL AYEEEQ R +KEEALKA+L+KEEE+KASL Sbjct: 359 TLARMLQADPPPKAVKVTMSRRVPLVGEELIAYEEEQTRLKKEEALKASLVKEEESKASL 418 Query: 1440 GVE-LVPADPMIIDASIKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSEW 1616 G + + DPM+IDA+ S++ G +RD+ IDGFV P +S PMFPFY+++SEW Sbjct: 419 GPDNNLSGDPMVIDANNANASADVVEPHGGRYRDILIDGFVPPSTSVAPMFPFYENNSEW 478 Query: 1617 DDFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYVK 1796 DDFGEVINPDDY+IKDEDMDQA+M I GD +GKLDEGSA LILD PSKVVS+E TV VK Sbjct: 479 DDFGEVINPDDYIIKDEDMDQAAMHIGGD-DGKLDEGSASLILDAKPSKVVSNELTVQVK 537 Query: 1797 CSLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQLE 1976 C L+++D+EGR+DG SIK IL HVAPLKLVLVHGSAEATEHL+QHCLK+VCP+VY PQ+E Sbjct: 538 CLLIFIDYEGRADGRSIKTILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYTPQIE 597 Query: 1977 ESIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXXX 2156 E+IDVTSDLCAYKVQLSEKLMSN+LFKKLGDYEIAWVDAEVGKTE+G Sbjct: 598 ETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTENGMLSLLPISTPAPP 657 Query: 2157 HKTVLVGDIKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDSSQKGGGN-IQHIIL 2333 HK+VLVGD+KMAD K FL+SKGIQVEFAGGALRCGEYVT+RKVG + QKGGG+ Q I++ Sbjct: 658 HKSVLVGDLKMADLKPFLSSKGIQVEFAGGALRCGEYVTIRKVGPAGQKGGGSGTQQIVI 717 Query: 2334 EGPLSDEYYKIRDHLYSQFYSL 2399 EGPL ++YYKIR +LYSQFY L Sbjct: 718 EGPLCEDYYKIRAYLYSQFYLL 739 >ref|XP_004499957.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like [Cicer arietinum] Length = 740 Score = 1172 bits (3032), Expect = 0.0 Identities = 570/741 (76%), Positives = 654/741 (88%), Gaps = 1/741 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PLCGVYNENPLSYLVSIDGFNFLID GWND+FD SLL+PLS+VAS++DAVLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDVGWNDNFDPSLLQPLSKVASSIDAVLL 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 SHPDTLHLGALPYAMKQLGLSAPVF+TEPVYRLGLLTMYDH+LSRKQ+S+FDLFTLD ID Sbjct: 61 SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDHFLSRKQISDFDLFTLDHID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQ++TRLTYSQN+++SGKGEGIVIAPH +GHLLGGT+WK+TKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQSVTRLTYSQNHHLSGKGEGIVIAPHNAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLDAIMKTLRADGKILVPVDTA 899 RHLNGTVL SFVRPAVLITDAYNAL +NQP RRQ+D++F D + KTLRA G +L+PVDTA Sbjct: 181 RHLNGTVLGSFVRPAVLITDAYNAL-NNQPYRRQKDKEFGDILKKTLRAGGNVLLPVDTA 239 Query: 900 GRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF 1079 GRVLEL+L+LE YW L YPI+FLTYV+SSTIDY KSFLEWMSDSIAKSFE TR+N F Sbjct: 240 GRVLELILMLESYWSDENLNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEQTRENIF 299 Query: 1080 LMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQFA 1259 L+K+VTL++NK++ +N PDGPK+VLASMASLE GFSHDIFVEW D KNLVLFTERGQF Sbjct: 300 LLKYVTLMVNKTDFDNAPDGPKVVLASMASLEAGFSHDIFVEWGNDVKNLVLFTERGQFG 359 Query: 1260 TLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKASL 1439 TLARMLQ+DPPPKAVKVT+SKR+PLVGEEL AYEEEQNR +KEEALKA+L+KEEE KAS Sbjct: 360 TLARMLQADPPPKAVKVTVSKRVPLVGEELIAYEEEQNRIKKEEALKASLLKEEELKASH 419 Query: 1440 GVELVPADPMIIDASIKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSEWD 1619 G + +DPM+ID K PS A ++G +RDVFIDGFV P +S PMFP Y+++SEWD Sbjct: 420 GADNNTSDPMVIDTGNKQPSPEATVQRNGGYRDVFIDGFVPPSTSVAPMFPCYENTSEWD 479 Query: 1620 DFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYVKC 1799 DFGEVINPDDY+IKDEDMDQ + + GD+NGKLDEG A LILDT PSKV+S E+TV V+C Sbjct: 480 DFGEVINPDDYVIKDEDMDQNANHVGGDINGKLDEGPASLILDTKPSKVLSDERTVQVRC 539 Query: 1800 SLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQLEE 1979 SL+YMDFEGRSDG SIK IL HVAPLKLVLVHGSAEAT+HL+QHCLKNVCP+VYAPQ+EE Sbjct: 540 SLIYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATDHLKQHCLKNVCPHVYAPQIEE 599 Query: 1980 SIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXXXH 2159 +IDVTSDLCAYKVQLSE+LMSN+LFKKLG+YEIAWVDAEVGK E+ H Sbjct: 600 TIDVTSDLCAYKVQLSERLMSNVLFKKLGEYEIAWVDAEVGKAENDMLSLLPVSGPPRPH 659 Query: 2160 KTVLVGDIKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDSSQKGGGN-IQHIILE 2336 K+VLVGD+K+ADFKQFL++KG+ VEFAGGALRCGEYVT+RKVGD++QKG G+ Q II+E Sbjct: 660 KSVLVGDLKLADFKQFLSTKGVPVEFAGGALRCGEYVTVRKVGDAAQKGAGSGTQQIIIE 719 Query: 2337 GPLSDEYYKIRDHLYSQFYSL 2399 GPL ++YYKIRD+LYSQFY L Sbjct: 720 GPLCEDYYKIRDYLYSQFYLL 740 >ref|XP_006490412.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like isoform X2 [Citrus sinensis] Length = 738 Score = 1170 bits (3026), Expect = 0.0 Identities = 583/745 (78%), Positives = 658/745 (88%), Gaps = 5/745 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PL GV+NENPLSYLVSIDGFNFLIDCGWNDHFD SLL+PLS+VAST+DAVLL Sbjct: 1 MGTSVQVTPLSGVFNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSKVASTIDAVLL 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 SHPDTLHLGALPYAMKQLGLSAPVF+TEPVYRLGLLTMYD YLSR+QVSEFDLFTLDDID Sbjct: 61 SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQYLSRRQVSEFDLFTLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQ++TRLTYSQNY++SGKGEGIV+APH +GHLLGGTVWK+TKDGEDVIYAVD+N RKE Sbjct: 121 SAFQSVTRLTYSQNYHLSGKGEGIVVAPHVAGHLLGGTVWKITKDGEDVIYAVDYNRRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLDAIMKTLRADGKILVPVDTA 899 +HLNGTVLESFVRPAVLITDAYNA L NQPPR+QR + F DAI KTLRA G +L+PVD+A Sbjct: 181 KHLNGTVLESFVRPAVLITDAYNA-LHNQPPRQQR-EMFQDAISKTLRAGGNVLLPVDSA 238 Query: 900 GRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF 1079 GRVLELLLILE YW +H L YPI+FLTYVSSSTIDY KSFLEWM DSI KSFE +RDNAF Sbjct: 239 GRVLELLLILEDYWAEHSLNYPIYFLTYVSSSTIDYVKSFLEWMGDSITKSFETSRDNAF 298 Query: 1080 LMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQFA 1259 L+KHVTLLINKSEL+N PDGPK+VLASMASLE GFSHDIFVEWA+D KNLVLFTERGQF Sbjct: 299 LLKHVTLLINKSELDNAPDGPKLVLASMASLEAGFSHDIFVEWASDVKNLVLFTERGQFG 358 Query: 1260 TLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKASL 1439 TLARMLQ+DPPPKAVKVTMS+R+PLVGEEL AYEEEQ R +KEEALKA+L+KEEE+KASL Sbjct: 359 TLARMLQADPPPKAVKVTMSRRVPLVGEELIAYEEEQTRLKKEEALKASLVKEEESKASL 418 Query: 1440 GVE-LVPADPMIIDASIKPPSSNAAGL---QHGAFRDVFIDGFVSPPSSAGPMFPFYDSS 1607 G + + DPM+IDA+ ++NA+ + G +RD+ IDGFV P +S PMFPFY+++ Sbjct: 419 GPDNNLSGDPMVIDAN----NANASAVVEPHGGRYRDILIDGFVPPSTSVAPMFPFYENN 474 Query: 1608 SEWDDFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTV 1787 SEWDDFGEVINPDDY+IKDEDMDQA+M I GD +GKLDEGSA LILD PSKVVS+E TV Sbjct: 475 SEWDDFGEVINPDDYIIKDEDMDQAAMHIGGD-DGKLDEGSASLILDAKPSKVVSNELTV 533 Query: 1788 YVKCSLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAP 1967 VKC L+++D+EGR+DG SIK IL HVAPLKLVLVHGSAEATEHL+QHCLK+VCP+VY P Sbjct: 534 QVKCLLIFIDYEGRADGRSIKTILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYTP 593 Query: 1968 QLEESIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXX 2147 Q+EE+IDVTSDLCAYKVQLSEKLMSN+LFKKLGDYEIAWVDAEVGKTE+G Sbjct: 594 QIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTENGMLSLLPISTP 653 Query: 2148 XXXHKTVLVGDIKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDSSQKGGGN-IQH 2324 HK+VLVGD+KMAD K FL+SKGIQVEFAGGALRCGEYVT+RKVG + QKGGG+ Q Sbjct: 654 APPHKSVLVGDLKMADLKPFLSSKGIQVEFAGGALRCGEYVTIRKVGPAGQKGGGSGTQQ 713 Query: 2325 IILEGPLSDEYYKIRDHLYSQFYSL 2399 I++EGPL ++YYKIR +LYSQFY L Sbjct: 714 IVIEGPLCEDYYKIRAYLYSQFYLL 738 >gb|EMJ21437.1| hypothetical protein PRUPE_ppa001928mg [Prunus persica] Length = 740 Score = 1169 bits (3024), Expect = 0.0 Identities = 570/741 (76%), Positives = 651/741 (87%), Gaps = 1/741 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFD SLLEPLSRVASTVDAVLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLEPLSRVASTVDAVLL 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 SHPDTLHLGALP+AMKQLGLSA V++TEPVYRLGLLTMYD YLSRKQVS+FDLFTLDDID Sbjct: 61 SHPDTLHLGALPFAMKQLGLSAVVYSTEPVYRLGLLTMYDQYLSRKQVSDFDLFTLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQN+TRLTY+QN+++SGKGEGIVI+PH SGHLLGGTVWK+TKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQNVTRLTYAQNHHLSGKGEGIVISPHVSGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLDAIMKTLRADGKILVPVDTA 899 +HLNG SFVRPAVLITDAYNAL +NQP RRQ+D++F D I KTLR+DG +L+PVDTA Sbjct: 181 KHLNGINQASFVRPAVLITDAYNAL-NNQPYRRQKDKEFTDTIKKTLRSDGNVLLPVDTA 239 Query: 900 GRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF 1079 GRVLEL+ ILE W L YPIFFLTYV+SSTIDY KSFLEWMSDSIAKSFE TR+NAF Sbjct: 240 GRVLELVQILESCWADENLNYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTRENAF 299 Query: 1080 LMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQFA 1259 ++K +TLL+NKSEL+N PDGPK+VLASMASLE GFSHDIFVEWA D KNLVLFTER QF Sbjct: 300 ILKRITLLVNKSELDNAPDGPKVVLASMASLEAGFSHDIFVEWATDPKNLVLFTERAQFG 359 Query: 1260 TLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKASL 1439 TLARMLQ+DPPPKAVKVTMS+R+PLVGEEL AYEEEQNR RK+EALKA+LIKEEE+K++ Sbjct: 360 TLARMLQADPPPKAVKVTMSRRVPLVGEELIAYEEEQNRIRKDEALKASLIKEEESKSAQ 419 Query: 1440 GVELVPADPMIIDASIKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSEWD 1619 G ++ +DP ++DAS +AAG G +RD+ IDGF P +SA PMFPFY+++S+WD Sbjct: 420 GADVSTSDPTVVDASNTHSLLDAAGPHGGGYRDMLIDGFTPPSTSAAPMFPFYENNSDWD 479 Query: 1620 DFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYVKC 1799 DFGEVINPDDY+IKD DMDQ +M + GD++GKLDEGSA LILDT PSKVV++E TV VKC Sbjct: 480 DFGEVINPDDYVIKDADMDQGAMHVGGDMDGKLDEGSASLILDTRPSKVVATELTVQVKC 539 Query: 1800 SLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQLEE 1979 SL+YMDFEGRSD SIK IL H+APLKLVLVHG+AEATEHL+QHCL +VCP+VYAPQ+EE Sbjct: 540 SLIYMDFEGRSDARSIKSILSHMAPLKLVLVHGTAEATEHLKQHCLTHVCPHVYAPQIEE 599 Query: 1980 SIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXXXH 2159 +IDVTSDLCAYKVQLSEKLMSN+LFKKLGDYEIAWVD+E GKTE+G H Sbjct: 600 TIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDSEAGKTENGALSLLPISTPAPPH 659 Query: 2160 KTVLVGDIKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDSSQKGGGN-IQHIILE 2336 ++VLVGD+KMA+FKQFL+ G+QVEFAGGALRCGEYVTLRKVGD+S KGGG+ Q I++E Sbjct: 660 ESVLVGDLKMANFKQFLSDNGVQVEFAGGALRCGEYVTLRKVGDASHKGGGSGTQQIVIE 719 Query: 2337 GPLSDEYYKIRDHLYSQFYSL 2399 GPL ++YYKIR++LYSQFY L Sbjct: 720 GPLCEDYYKIREYLYSQFYLL 740 >gb|EXC19142.1| Cleavage and polyadenylation specificity factor subunit 2 [Morus notabilis] Length = 741 Score = 1166 bits (3017), Expect = 0.0 Identities = 571/742 (76%), Positives = 652/742 (87%), Gaps = 2/742 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PLCGVYNENPLSYLVSIDGFNFLIDCGWNDH D S+L+PL++VASTVDAVLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHLDPSILQPLTKVASTVDAVLL 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 SH DTLHLGALPYAMKQ GLSAPV++TEPVYRLGLLTMYD +L RKQVSEFDLFTLDDID Sbjct: 61 SHADTLHLGALPYAMKQFGLSAPVYSTEPVYRLGLLTMYDQFLWRKQVSEFDLFTLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQN+TRLTY+QN+++SGKGEGIVI+PH +GHLLGGTVWK+TKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQNVTRLTYAQNHHLSGKGEGIVISPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLDAIMKTLRADGKILVPVDTA 899 +HLNG SFVRPAVLITDAYNAL +NQP RRQ D++F D I KTLR DGK+L+PVDTA Sbjct: 181 KHLNGINPASFVRPAVLITDAYNAL-NNQPYRRQMDKEFTDTIKKTLRIDGKVLLPVDTA 239 Query: 900 GRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF 1079 GRVLELL ILE W + L+YPI+FLTYV+SSTIDY KSFLEWMSDSIAKSFE TRDNAF Sbjct: 240 GRVLELLQILESCWAEESLSYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTRDNAF 299 Query: 1080 LMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQFA 1259 L+KHVTLL+NK++L N PDGPK+VLASMASLE GFSHDIFVEWA D++NLVLFTERGQF Sbjct: 300 LLKHVTLLVNKTDLNNAPDGPKVVLASMASLEAGFSHDIFVEWATDARNLVLFTERGQFG 359 Query: 1260 TLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKASL 1439 TLARMLQ+DPPPKAVKVTMSKR+PLVGEEL AYEEEQNR ++EEALKA+LIKEEE+KAS Sbjct: 360 TLARMLQADPPPKAVKVTMSKRVPLVGEELIAYEEEQNRIKREEALKASLIKEEESKASH 419 Query: 1440 GVELVPADPMIIDASIKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSEWD 1619 G ++ +DPM+IDASI P + AG G +RDVFIDGFV +S PMFPF++++SEWD Sbjct: 420 GTDINISDPMVIDASITNPLPDVAGPHSGGYRDVFIDGFVPSSTSVAPMFPFFETTSEWD 479 Query: 1620 DFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYVKC 1799 DFGEVINPD+Y+IKDEDMDQ +M + GD++GKLDE SA LILDT PSKV+S+E TV VKC Sbjct: 480 DFGEVINPDNYIIKDEDMDQGAMHVSGDMDGKLDEASASLILDTKPSKVISNELTVPVKC 539 Query: 1800 SLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQLEE 1979 SL+YMDFEGRSD SIK IL H+APLKLVLVHG+AEATEHL+QHC+K VCP+VYAPQ+EE Sbjct: 540 SLLYMDFEGRSDARSIKSILSHMAPLKLVLVHGTAEATEHLKQHCIKQVCPHVYAPQIEE 599 Query: 1980 SIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXXXH 2159 +ID+TSDLCAYKVQLSEKLMSN+LFKKLGD+E AWVD+EVGKTE+G H Sbjct: 600 TIDITSDLCAYKVQLSEKLMSNVLFKKLGDHETAWVDSEVGKTENGTLSLLPLSSAAPPH 659 Query: 2160 KTVLVGDIKMADFKQFLASKGIQVEFA-GGALRCGEYVTLRKVGDSSQKGGG-NIQHIIL 2333 K+VLVGD+KMA+FKQFLA G+QVEFA GGALRCGEYVTLRKVGD+S KGGG Q I++ Sbjct: 660 KSVLVGDLKMANFKQFLADNGVQVEFAGGGALRCGEYVTLRKVGDASHKGGGPGTQQIVI 719 Query: 2334 EGPLSDEYYKIRDHLYSQFYSL 2399 EGPL +EYYKIR++LYSQF+ L Sbjct: 720 EGPLCEEYYKIREYLYSQFFLL 741 >ref|XP_006587302.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like isoform X1 [Glycine max] Length = 739 Score = 1163 bits (3009), Expect = 0.0 Identities = 574/741 (77%), Positives = 648/741 (87%), Gaps = 1/741 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PLCGVYNENPLSYLVSIDGFNFL+DCGWNDHFD S L+PL+RVAST+DAVLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSHLQPLARVASTIDAVLL 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 SH DTLHLGALPYAMK+LGLSAPV++TEPVYRLGLLTMYD YLSRKQVSEFDLFTLDDID Sbjct: 61 SHADTLHLGALPYAMKRLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQ++TRLTYSQN++ SGKGEGIVIAPH +GHLLGGT+WK+TKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLDAIMKTLRADGKILVPVDTA 899 RHLNGTVL SFVRPAVLITDAYNAL +NQP RRQ D++F D + KTLRA G +L+PVDT Sbjct: 181 RHLNGTVLGSFVRPAVLITDAYNAL-NNQPYRRQNDKEFGDILKKTLRAGGNVLLPVDTV 239 Query: 900 GRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF 1079 GRVLEL+L+LE YW L YPI+FLTYV+SSTIDY KSFLEWMSD+IAKSFE TR+N F Sbjct: 240 GRVLELILMLELYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIF 299 Query: 1080 LMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQFA 1259 L+K+VTLLINK+EL+N PDGPK+VLASMASLE GFSHDIFVEWA D KNLVLFTERGQFA Sbjct: 300 LLKYVTLLINKTELDNAPDGPKVVLASMASLEAGFSHDIFVEWANDVKNLVLFTERGQFA 359 Query: 1260 TLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKASL 1439 TLARMLQ+DPPPKAVKV +SKR+PLVGEEL AYEEEQNR +KE ALKA+L+KEEE K S Sbjct: 360 TLARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQNRIKKE-ALKASLMKEEELKTSH 418 Query: 1440 GVELVPADPMIIDASIKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSEWD 1619 G + +DPM+ID+ G + G +RD+FIDGFV P +S P+FP Y+++SEWD Sbjct: 419 GADNDISDPMVIDSGNNHVPPEVTGPRGGGYRDIFIDGFVPPSTSVAPIFPCYENTSEWD 478 Query: 1620 DFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYVKC 1799 DFGEVINPDDY+IKDEDMDQ +M D+NGKLDEG+A LILDT PSKVVS E+TV V+C Sbjct: 479 DFGEVINPDDYVIKDEDMDQTAMHGGSDINGKLDEGAASLILDTKPSKVVSDERTVQVRC 538 Query: 1800 SLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQLEE 1979 SLVYMDFEGRSDG SIK IL HVAPLKLVLVHGSAEATEHL+QHCLK+VCP+VYAPQ+EE Sbjct: 539 SLVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEE 598 Query: 1980 SIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXXXH 2159 +IDVTSDLCAYKVQLSEKLMSN+LFKKLGDYEIAWVDA VGKTE+ H Sbjct: 599 TIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAVVGKTENDPLSLLPVSGAAPPH 658 Query: 2160 KTVLVGDIKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDSSQKGGGN-IQHIILE 2336 K+VLVGD+K+AD KQFL+SKG+QVEFAGGALRCGEYVTLRKVGD+SQKGGG+ Q I++E Sbjct: 659 KSVLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDASQKGGGSGAQQIVIE 718 Query: 2337 GPLSDEYYKIRDHLYSQFYSL 2399 GPL ++YYKIRD+LYSQFY L Sbjct: 719 GPLCEDYYKIRDYLYSQFYLL 739 >gb|ESW24245.1| hypothetical protein PHAVU_004G114000g [Phaseolus vulgaris] Length = 739 Score = 1158 bits (2996), Expect = 0.0 Identities = 571/741 (77%), Positives = 648/741 (87%), Gaps = 1/741 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PLCGVYNENPLSYLVSID FNFLIDCGWNDHFD SLL+PLSRVAST+DAVL+ Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDDFNFLIDCGWNDHFDPSLLQPLSRVASTIDAVLV 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 SH D LHLGALPYAMKQLGLSAPV++TEPVYRLGLLTMYD YLSRKQVSEFDLFTLDDID Sbjct: 61 SHADILHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQ++TRLTYSQN++++GKGEGIVIAPH +GHLLGGTVWK+TKDGEDVIYAVDFNHRKE Sbjct: 121 SAFQSVTRLTYSQNHHLTGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLDAIMKTLRADGKILVPVDTA 899 RHLNGT L SFVRPAVLITDAYNAL +NQP RRQ D++F D + KTLRA G +L+PVDTA Sbjct: 181 RHLNGTALGSFVRPAVLITDAYNAL-NNQPYRRQNDKEFGDILKKTLRAGGNVLLPVDTA 239 Query: 900 GRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF 1079 GRVLEL+L+LE YW L YPI+FLTYV+SSTIDY KSFLEWMSDSIAKSFE TR+N F Sbjct: 240 GRVLELILMLESYWSDENLNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTRENIF 299 Query: 1080 LMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQFA 1259 L+K++TLLINK+EL+N P+GPK+VLASMASLE GFSHDIFVEWA D KNLVLFTERGQFA Sbjct: 300 LLKYITLLINKTELDNAPEGPKVVLASMASLEAGFSHDIFVEWANDMKNLVLFTERGQFA 359 Query: 1260 TLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKASL 1439 TLARMLQ+DPPPKAVKV +SKR+PLVGEEL AYEEEQNR +KE ALKA+L+KEEE K S Sbjct: 360 TLARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQNRIKKE-ALKASLMKEEELKTSH 418 Query: 1440 GVELVPADPMIIDASIKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSEWD 1619 G + +DPM++D+ AG + G +RD++IDGFV P +S PMFP Y+++ EWD Sbjct: 419 GSDNNNSDPMVVDSGNNHVPPEVAGPRGGGYRDIYIDGFVPPSTSVAPMFPCYENTLEWD 478 Query: 1620 DFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYVKC 1799 DFGEVINPDDY+IKDEDM+Q +M GD+NGKLDEG+AGLILDT PSKVVS E+TV VKC Sbjct: 479 DFGEVINPDDYVIKDEDMNQIAMHGGGDINGKLDEGAAGLILDTKPSKVVSDERTVQVKC 538 Query: 1800 SLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQLEE 1979 SLVYMDFEGRSDG SIK IL HVAPLKLVLVHGSAEATEHL+QHCLK+VCP+V APQ++E Sbjct: 539 SLVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVSAPQIDE 598 Query: 1980 SIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXXXH 2159 +IDVTSDLCAYKV LSEKLMSN+LFKKLGDYE+AWVDA VGKTES H Sbjct: 599 TIDVTSDLCAYKVLLSEKLMSNVLFKKLGDYEVAWVDAVVGKTESDTLSVLPVSEAAPPH 658 Query: 2160 KTVLVGDIKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDSSQKGGGN-IQHIILE 2336 K+VLVGD+K+AD KQFL+SKG+QVEFAGGALRCGEYVTLRKVGD++QKGGG+ Q I++E Sbjct: 659 KSVLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDATQKGGGSGAQQIVIE 718 Query: 2337 GPLSDEYYKIRDHLYSQFYSL 2399 GPL ++YYKIRD+LYSQFY L Sbjct: 719 GPLCEDYYKIRDYLYSQFYLL 739 >ref|XP_003548179.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like isoform 1 [Glycine max] Length = 738 Score = 1155 bits (2989), Expect = 0.0 Identities = 572/741 (77%), Positives = 647/741 (87%), Gaps = 1/741 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PLCGVYNENPLSYLVSIDGFNFL+DCGWNDHFD SLL+PL+RVAST+DAVLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSLLQPLARVASTIDAVLL 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 SH DTLHLGALPYAMKQLGLSAPV++TEPVYRLGLLTMYD YLSRKQVSEFDLFTLDDID Sbjct: 61 SHADTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 +FQ++TRLTYSQN++ SGKGEGIVIAPH +GHLLGGT+WK+TKDGEDVIYAVDFNHRKE Sbjct: 121 SSFQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLDAIMKTLRADGKILVPVDTA 899 RHLNGTVL SFVRPAVLITDAYNA L+NQP RRQ D++F D + KTLR G +L+PVDT Sbjct: 181 RHLNGTVLGSFVRPAVLITDAYNA-LNNQPYRRQNDKEFGDILKKTLREGGNVLLPVDTV 239 Query: 900 GRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF 1079 GRVLEL+L+LE YW L YPI+FLTYV+SSTIDY KSFLEWMSD+IAKSFE TR+N F Sbjct: 240 GRVLELILMLESYWTDENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIF 299 Query: 1080 LMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQFA 1259 L+K+VTLLINK+EL+N PDGPK+VLASMASLE GFSH+IFVEWA D KNLVLFTERGQFA Sbjct: 300 LLKYVTLLINKTELDNAPDGPKVVLASMASLEAGFSHEIFVEWANDVKNLVLFTERGQFA 359 Query: 1260 TLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKASL 1439 TLARMLQ+DPPPKAVKV +SKR+ LVGEEL AYEEEQNR +K EALKA+L+KEEE K S Sbjct: 360 TLARMLQADPPPKAVKVVVSKRVALVGEELIAYEEEQNRIKK-EALKASLMKEEEFKTSH 418 Query: 1440 GVELVPADPMIIDASIKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSEWD 1619 G + +D M+ID+ +G + G +RD+FIDGFV P +S PMFP Y+++SEWD Sbjct: 419 GADNNTSDSMVIDSGNNHVPPEVSGPRGGGYRDIFIDGFVPPLTSVAPMFPCYENTSEWD 478 Query: 1620 DFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYVKC 1799 DFGEVINPDDY+IKDEDMDQ +M GD+NGKLDEG+A LILDT PSKVVS E+TV V+C Sbjct: 479 DFGEVINPDDYVIKDEDMDQTAMH-GGDINGKLDEGAASLILDTKPSKVVSDERTVQVRC 537 Query: 1800 SLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQLEE 1979 SLVYMDFEGRSDG SIK IL HVAPLKLVLVHGSAEATEHL+QHCLK+VCP+VYAPQLEE Sbjct: 538 SLVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQLEE 597 Query: 1980 SIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXXXH 2159 +IDVTSDLCAYKV LSEKLMSN+LFKKLGDYE+AWVDA VGKTE+ H Sbjct: 598 TIDVTSDLCAYKVLLSEKLMSNVLFKKLGDYELAWVDAVVGKTENDPLSLLPVSGAAPPH 657 Query: 2160 KTVLVGDIKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDSSQKGGGN-IQHIILE 2336 K+VLVGD+K+AD KQFL+SKG+QVEFAGGALRCGEYVTLRKVGD+SQKGGG+ Q I++E Sbjct: 658 KSVLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDASQKGGGSGAQQIVIE 717 Query: 2337 GPLSDEYYKIRDHLYSQFYSL 2399 GPL ++YYKIRD+LYSQFY L Sbjct: 718 GPLCEDYYKIRDYLYSQFYLL 738 >ref|XP_002330904.1| predicted protein [Populus trichocarpa] Length = 740 Score = 1129 bits (2921), Expect = 0.0 Identities = 561/741 (75%), Positives = 638/741 (86%), Gaps = 1/741 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PL GVYNENPLSYLVSIDGFNFLIDCGWNDHFD SLL+PLS+VAS +DAVLL Sbjct: 1 MGTSVQVTPLSGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSKVASKIDAVLL 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 S+ D LHLGALP+AMKQ GL+APVF+TEPVYRLGLLTMYD SRK VSEFDLF+LDDID Sbjct: 61 SYGDMLHLGALPFAMKQFGLNAPVFSTEPVYRLGLLTMYDQSFSRKAVSEFDLFSLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQN TRLTYSQN+++SGKGEGIVIAPH +GHLLGGTVWK+TKDGEDV+YAVDFNHRKE Sbjct: 121 SAFQNFTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVVYAVDFNHRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLDAIMKTLRADGKILVPVDTA 899 RHLNGTVLESF RPAVLITDAYNAL ++QP R+QRD+QFL+ I+KTL G +L+PVD+A Sbjct: 181 RHLNGTVLESFYRPAVLITDAYNAL-NSQPSRQQRDKQFLETILKTLEGGGNVLLPVDSA 239 Query: 900 GRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF 1079 GRVLELLLILEQ+W Q L YPIFFL+YVSSSTIDY KSFLEWMSDSIAKSFE +RDNAF Sbjct: 240 GRVLELLLILEQFWGQRFLNYPIFFLSYVSSSTIDYIKSFLEWMSDSIAKSFETSRDNAF 299 Query: 1080 LMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQFA 1259 LMKHVTLLI+K EL+N GPK+VLAS+ASLE GFSHDIF EWAAD KNLVLFTERGQF Sbjct: 300 LMKHVTLLISKDELDNASTGPKVVLASVASLEAGFSHDIFAEWAADVKNLVLFTERGQFG 359 Query: 1260 TLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKASL 1439 TLARMLQ+DPPPKAVK+TMS+R+PLVG+EL AYEEEQ R ++EE LKA+LIKEEE+K S Sbjct: 360 TLARMLQADPPPKAVKMTMSRRVPLVGDELIAYEEEQKRLKREEELKASLIKEEESKVSH 419 Query: 1440 GVELVPADPMIIDASIKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSEWD 1619 G + +DPM+ID+ + G + RD+ IDGFV P +S PMFPFY++S EWD Sbjct: 420 GPDNNLSDPMVIDSGNTHSPLDVVGSRGSGHRDILIDGFVPPSTSVAPMFPFYENSLEWD 479 Query: 1620 DFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYVKC 1799 +FGEVINPDDY+++DEDMDQA+M + D++GKLDEGSA LILDT PSKVVS+E TV VKC Sbjct: 480 EFGEVINPDDYVVQDEDMDQAAMHVGADIDGKLDEGSASLILDTKPSKVVSNELTVQVKC 539 Query: 1800 SLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQLEE 1979 SL+YMD+EGRSDG SIK IL HVAPLKLV+VHGSAEATEHL+QH L VYAPQ+EE Sbjct: 540 SLIYMDYEGRSDGRSIKSILTHVAPLKLVMVHGSAEATEHLKQHFLNIKNVQVYAPQIEE 599 Query: 1980 SIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXXXH 2159 +IDVTSDLCAYKVQLSEKLMSN+LFKKLGDYE+AWVDAEVGKTE+G H Sbjct: 600 TIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAEVGKTENGMLSLLPISSPAPPH 659 Query: 2160 KTVLVGDIKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDSSQKGGGN-IQHIILE 2336 K+VLVGD+KMADFKQFLASKG+QVEFAGGALRCGEYVTLRKVG+ SQKGG + Q II+E Sbjct: 660 KSVLVGDLKMADFKQFLASKGVQVEFAGGALRCGEYVTLRKVGNPSQKGGASGTQQIIIE 719 Query: 2337 GPLSDEYYKIRDHLYSQFYSL 2399 GPL ++YYKIR++LYSQFY L Sbjct: 720 GPLCEDYYKIREYLYSQFYLL 740 >ref|XP_006369487.1| Cleavage and polyadenylation specificity factor family protein [Populus trichocarpa] gi|550348036|gb|ERP66056.1| Cleavage and polyadenylation specificity factor family protein [Populus trichocarpa] Length = 740 Score = 1129 bits (2920), Expect = 0.0 Identities = 561/741 (75%), Positives = 637/741 (85%), Gaps = 1/741 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PL GVYNENPLSYLVSIDGFNFLIDCGWNDHFD SLL+PLS+VAS +DAVLL Sbjct: 1 MGTSVQVTPLSGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSKVASKIDAVLL 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 S+ D LHLGALP+AMKQ GL+APVF+TEPVYRLGLLTMYD SRK VSEFDLF+LDDID Sbjct: 61 SYGDMLHLGALPFAMKQFGLNAPVFSTEPVYRLGLLTMYDQSFSRKAVSEFDLFSLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQN TRLTYSQN+++SGKGEGIVIAPH +GHLLGGTVWK+TKDGEDV+YAVDFNHRKE Sbjct: 121 SAFQNFTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVVYAVDFNHRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLDAIMKTLRADGKILVPVDTA 899 RHLNGTVLESF RPAVLITDAYNAL ++QP R+QRD+QFL+ I+KTL G +L+PVD+A Sbjct: 181 RHLNGTVLESFYRPAVLITDAYNAL-NSQPSRQQRDKQFLETILKTLEGGGNVLLPVDSA 239 Query: 900 GRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF 1079 GRVLELLLILEQ+W Q L YPIFFL+YVSSSTIDY KSFLEWMSDSIAKSFE +RDNAF Sbjct: 240 GRVLELLLILEQFWGQRFLNYPIFFLSYVSSSTIDYIKSFLEWMSDSIAKSFETSRDNAF 299 Query: 1080 LMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQFA 1259 LMKHVTLLI+K EL+N GPK+VLAS+ASLE GFSHDIF EWAAD KNLVLFTERGQF Sbjct: 300 LMKHVTLLISKDELDNASTGPKVVLASVASLEAGFSHDIFAEWAADVKNLVLFTERGQFG 359 Query: 1260 TLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKASL 1439 TLARMLQ+DPPPKAVK+TMS+R+PLVG+EL AYEEEQ R ++EE LKA+LIKEEE+K S Sbjct: 360 TLARMLQADPPPKAVKMTMSRRVPLVGDELIAYEEEQKRLKREEELKASLIKEEESKVSH 419 Query: 1440 GVELVPADPMIIDASIKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSEWD 1619 G + +DPM+ID+ + G + RD+ IDGFV P +S PMFPFY++S EWD Sbjct: 420 GPDNNLSDPMVIDSGNTHSPLDVVGSRGSGHRDILIDGFVPPSTSVAPMFPFYENSLEWD 479 Query: 1620 DFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYVKC 1799 +FGEVINPDDY+++DEDMDQA+M + D++GKLDEGSA LILDT PSKVVS+E TV VKC Sbjct: 480 EFGEVINPDDYVVQDEDMDQAAMHVGADIDGKLDEGSASLILDTKPSKVVSNELTVQVKC 539 Query: 1800 SLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQLEE 1979 SL+YMD+EGRSDG SIK IL HVAPLKLV+VHGSAEATEHL+QH L VYAPQ+EE Sbjct: 540 SLIYMDYEGRSDGRSIKSILTHVAPLKLVMVHGSAEATEHLKQHFLNIKNVQVYAPQIEE 599 Query: 1980 SIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXXXH 2159 +IDVTSDLCAYKVQLSEKLMSN+LFKKLGDYE+AWVDAEVGKTE+G H Sbjct: 600 TIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAEVGKTENGMLSLLPISSPAPPH 659 Query: 2160 KTVLVGDIKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVGDSSQKGG-GNIQHIILE 2336 K+VLVGD+KMADFKQFLASKG+QVEFAGGALRCGEYVTLRKVG+ SQKGG Q II+E Sbjct: 660 KSVLVGDLKMADFKQFLASKGVQVEFAGGALRCGEYVTLRKVGNPSQKGGTSGTQQIIIE 719 Query: 2337 GPLSDEYYKIRDHLYSQFYSL 2399 GPL ++YYKIR++LYSQFY L Sbjct: 720 GPLCEDYYKIREYLYSQFYLL 740 >ref|NP_197776.1| cleavage and polyadenylation specificity factor 100 [Arabidopsis thaliana] gi|18203240|sp|Q9LKF9.2|CPSF2_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit; Short=AtCPSF100; Short=CPSF 100 kDa subunit; AltName: Full=Protein EMBRYO DEFECTIVE 1265; AltName: Full=Protein ENHANCED SILENCING PHENOTYPE 5 gi|10176855|dbj|BAB10061.1| cleavage and polyadenylation specificity factor [Arabidopsis thaliana] gi|14334618|gb|AAK59487.1| putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] gi|28393921|gb|AAO42368.1| putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] gi|332005845|gb|AED93228.1| cleavage and polyadenylation specificity factor 100 [Arabidopsis thaliana] Length = 739 Score = 1120 bits (2896), Expect = 0.0 Identities = 547/742 (73%), Positives = 639/742 (86%), Gaps = 2/742 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PLCGVYNENPLSYLVSIDGFNFLIDCGWND FDTSLLEPLSRVAST+DAVLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLL 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 SHPDTLH+GALPYAMKQLGLSAPV+ATEPV+RLGLLTMYD +LSRKQVS+FDLFTLDDID Sbjct: 61 SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQN+ RLTYSQNY++SGKGEGIVIAPH +GH+LGG++W++TKDGEDVIYAVD+NHRKE Sbjct: 121 SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLDAIMKTLRADGKILVPVDTA 899 RHLNGTVL+SFVRPAVLITDAY+AL +NQ R+QRD++FLD I K L G +L+PVDTA Sbjct: 181 RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240 Query: 900 GRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF 1079 GRVLELLLILEQ+W Q ++PI+FLTYVSSSTIDY KSFLEWMSDSI+KSFE +RDNAF Sbjct: 241 GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300 Query: 1080 LMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQFA 1259 L++HVTLLINK++L+N P GPK+VLASMASLE GF+ +IFVEWA D +NLVLFTE GQF Sbjct: 301 LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360 Query: 1260 TLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKASL 1439 TLARMLQS PPPK VKVTMSKR+PL GEEL AYEEEQNR ++EEAL+A+L+KEEE KAS Sbjct: 361 TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420 Query: 1440 GVELVPADPMIIDASIKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSEWD 1619 G + ++PMIID + + G A++D+ IDGFV P SS PMFP+YD++SEWD Sbjct: 421 GSDDNSSEPMIIDTK---TTHDVIGSHGPAYKDILIDGFVPPSSSVAPMFPYYDNTSEWD 477 Query: 1620 DFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYVKC 1799 DFGE+INPDDY+IKDEDMD+ +M GD++G+LDE +A L+LDT PSKV+S+E V V C Sbjct: 478 DFGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVMSNELIVTVSC 537 Query: 1800 SLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQLEE 1979 SLV MD+EGRSDG SIK ++ HV+PLKLVLVH AEATEHL+QHCL N+CP+VYAPQ+EE Sbjct: 538 SLVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEE 597 Query: 1980 SIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXXXH 2159 ++DVTSDLCAYKVQLSEKLMSN++FKKLGD E+AWVD+EVGKTE H Sbjct: 598 TVDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTERDMRSLLPMPGAASPH 657 Query: 2160 KTVLVGDIKMADFKQFLASKGIQVEFA-GGALRCGEYVTLRKVGDSSQKGGGN-IQHIIL 2333 K VLVGD+K+ADFKQFL+SKG+QVEFA GGALRCGEYVTLRKVG + QKGG + Q I++ Sbjct: 658 KPVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILI 717 Query: 2334 EGPLSDEYYKIRDHLYSQFYSL 2399 EGPL ++YYKIRD+LYSQFY L Sbjct: 718 EGPLCEDYYKIRDYLYSQFYLL 739 >ref|XP_002872080.1| CPSF100 [Arabidopsis lyrata subsp. lyrata] gi|297317917|gb|EFH48339.1| CPSF100 [Arabidopsis lyrata subsp. lyrata] Length = 739 Score = 1119 bits (2894), Expect = 0.0 Identities = 547/742 (73%), Positives = 639/742 (86%), Gaps = 2/742 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PL GVYNENPLSYLVSIDGFNFLIDCGWND FDTSLLEPLSRVAS++DAVLL Sbjct: 1 MGTSVQVTPLSGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASSIDAVLL 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 SHPDTLHLGALPYAMKQLGLSAPV+ATEPV+RLGLLTMYD +LSRKQVS+FDLFTLDDID Sbjct: 61 SHPDTLHLGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQN+ RLTYSQNY++SGKGEGIVIAPH +GH+LGG++W++TKDGEDVIYAVD+NHRKE Sbjct: 121 SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLDAIMKTLRADGKILVPVDTA 899 RHLNGTVL+SFVRPAVLITDAY+AL +NQ R+QRD++FLD I K L G +L+PVDTA Sbjct: 181 RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240 Query: 900 GRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF 1079 GRVLELLLILEQ+W Q ++PI+FLTYVSSSTIDY KSFLEWMSDSI+KSFE +RDNAF Sbjct: 241 GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300 Query: 1080 LMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQFA 1259 L++HVTLLINK++L+N P GPK+VLASMASLE GF+ +IFVEWA D +NLVLFTE GQF Sbjct: 301 LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360 Query: 1260 TLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKASL 1439 TLARMLQS PPPK VKVTMSKR+PL GEEL AYEEEQNR ++EEAL+A+L+KEEE KAS Sbjct: 361 TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420 Query: 1440 GVELVPADPMIIDASIKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSEWD 1619 G + ++PM+ID + + G A++D+ IDGFV P SS PMFPFYD++SEWD Sbjct: 421 GSDDNSSEPMVIDTK---TTHDVVGSHGPAYKDILIDGFVPPSSSVAPMFPFYDNTSEWD 477 Query: 1620 DFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYVKC 1799 DFGE+INPDDY+IKDEDMD+ +M GD++G+LDE +A L+LDT PSKV+S+E V V C Sbjct: 478 DFGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVISNELIVTVSC 537 Query: 1800 SLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQLEE 1979 SLV MD+EGRSDG SIK ++ HV+PLKLVLVH AEATEHL+QHCL N+CP+VYAPQ+EE Sbjct: 538 SLVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEE 597 Query: 1980 SIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXXXH 2159 ++DVTSDLCAYKVQLSEKLMSN++FKKLGD E+AWVD+EVGKTES H Sbjct: 598 TVDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTESDMRSLLPMSGAASPH 657 Query: 2160 KTVLVGDIKMADFKQFLASKGIQVEFA-GGALRCGEYVTLRKVGDSSQKGGGN-IQHIIL 2333 K VLVGD+K+ADFKQFL+SKG+QVEFA GGALRCGEYVTLRKVG + QKGG + Q I++ Sbjct: 658 KPVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILI 717 Query: 2334 EGPLSDEYYKIRDHLYSQFYSL 2399 EGPL ++YYKIRD+LYSQFY L Sbjct: 718 EGPLCEDYYKIRDYLYSQFYLL 739 >gb|AAF82809.1|AF283277_1 polyadenylation cleavage/specificity factor 100 kDa subunit [Arabidopsis thaliana] Length = 739 Score = 1118 bits (2892), Expect = 0.0 Identities = 546/742 (73%), Positives = 638/742 (85%), Gaps = 2/742 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PLCGVYNENPLSYLVSIDGFNFLIDCGWND FDTSLLEPL RVAST+DAVLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLPRVASTIDAVLL 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 SHPDTLH+GALPYAMKQLGLSAPV+ATEPV+RLGLLTMYD +LSRKQVS+FDLFTLDDID Sbjct: 61 SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQN+ RLTYSQNY++SGKGEGIVIAPH +GH+LGG++W++TKDGEDVIYAVD+NHRKE Sbjct: 121 SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLDAIMKTLRADGKILVPVDTA 899 RHLNGTVL+SFVRPAVLITDAY+AL +NQ R+QRD++FLD I K L G +L+PVDTA Sbjct: 181 RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240 Query: 900 GRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF 1079 GRVLELLLILEQ+W Q ++PI+FLTYVSSSTIDY KSFLEWMSDSI+KSFE +RDNAF Sbjct: 241 GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300 Query: 1080 LMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQFA 1259 L++HVTLLINK++L+N P GPK+VLASMASLE GF+ +IFVEWA D +NLVLFTE GQF Sbjct: 301 LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360 Query: 1260 TLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKASL 1439 TLARMLQS PPPK VKVTMSKR+PL GEEL AYEEEQNR ++EEAL+A+L+KEEE KAS Sbjct: 361 TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420 Query: 1440 GVELVPADPMIIDASIKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSEWD 1619 G + ++PMIID + + G A++D+ IDGFV P SS PMFP+YD++SEWD Sbjct: 421 GSDDNSSEPMIIDTK---TTHDVVGSHGPAYKDILIDGFVPPSSSVAPMFPYYDNTSEWD 477 Query: 1620 DFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYVKC 1799 DFGE+INPDDY+IKDEDMD+ +M GD++G+LDE +A L+LDT PSKV+S+E V V C Sbjct: 478 DFGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVMSNELIVTVSC 537 Query: 1800 SLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQLEE 1979 SLV MD+EGRSDG SIK ++ HV+PLKLVLVH AEATEHL+QHCL N+CP+VYAPQ+EE Sbjct: 538 SLVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEE 597 Query: 1980 SIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXXXH 2159 ++DVTSDLCAYKVQLSEKLMSN++FKKLGD E+AWVD+EVGKTE H Sbjct: 598 TVDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTERDMRSLLPMPGAASPH 657 Query: 2160 KTVLVGDIKMADFKQFLASKGIQVEFA-GGALRCGEYVTLRKVGDSSQKGGGN-IQHIIL 2333 K VLVGD+K+ADFKQFL+SKG+QVEFA GGALRCGEYVTLRKVG + QKGG + Q I++ Sbjct: 658 KPVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILI 717 Query: 2334 EGPLSDEYYKIRDHLYSQFYSL 2399 EGPL ++YYKIRD+LYSQFY L Sbjct: 718 EGPLCEDYYKIRDYLYSQFYLL 739 >ref|XP_006287134.1| hypothetical protein CARUB_v10000306mg [Capsella rubella] gi|482555840|gb|EOA20032.1| hypothetical protein CARUB_v10000306mg [Capsella rubella] Length = 739 Score = 1116 bits (2887), Expect = 0.0 Identities = 546/742 (73%), Positives = 637/742 (85%), Gaps = 2/742 (0%) Frame = +3 Query: 180 MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDTSLLEPLSRVASTVDAVLL 359 MGTSVQV PLCGVYNENPLSYLVSIDGFNFLIDCGWND FDTSLLEPLSRVAST+DAVLL Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLL 60 Query: 360 SHPDTLHLGALPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 539 SHPDTLHLGALPYAMKQLGLSAPV+ATEPV+RLGLLTMYD +LSRKQVS+FDLFTLDDID Sbjct: 61 SHPDTLHLGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120 Query: 540 LAFQNITRLTYSQNYYMSGKGEGIVIAPHASGHLLGGTVWKVTKDGEDVIYAVDFNHRKE 719 AFQN+ RLTYSQNY++ GKGEGIVIAPH +GH+LGG++W++TKDGE VIYAVD+NHRKE Sbjct: 121 NAFQNVIRLTYSQNYHLPGKGEGIVIAPHVAGHMLGGSIWRITKDGEGVIYAVDYNHRKE 180 Query: 720 RHLNGTVLESFVRPAVLITDAYNALLSNQPPRRQRDQQFLDAIMKTLRADGKILVPVDTA 899 RHLNGTVL+SFVRPAVLITDAY+AL +NQ R+QRD++FLD I K L G +L+PVDTA Sbjct: 181 RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240 Query: 900 GRVLELLLILEQYWEQHQLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF 1079 GRVLELLLILEQ+W Q ++PI+FLTYVSSSTIDY KSFLEWMSDSI+KSFE +RDNAF Sbjct: 241 GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300 Query: 1080 LMKHVTLLINKSELENIPDGPKIVLASMASLEVGFSHDIFVEWAADSKNLVLFTERGQFA 1259 L++HVTLLINK++L+N P GPK+VLASMASLE GF+ DIFVEWA D +NLVLFTE GQF Sbjct: 301 LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFARDIFVEWANDPRNLVLFTETGQFG 360 Query: 1260 TLARMLQSDPPPKAVKVTMSKRIPLVGEELAAYEEEQNRKRKEEALKATLIKEEEAKASL 1439 TLARMLQS PPPK VKVTMSKR+PL GEEL AYEEEQNR ++EEAL+A+L+KEEE KAS Sbjct: 361 TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRIKREEALRASLVKEEETKASH 420 Query: 1440 GVELVPADPMIIDASIKPPSSNAAGLQHGAFRDVFIDGFVSPPSSAGPMFPFYDSSSEWD 1619 G + ++PM+ID + + G A++D+ IDGFV P SS PMFPFYD++SEWD Sbjct: 421 GSDDNSSEPMVIDTK---TTHDVVGSHGPAYKDILIDGFVPPSSSVAPMFPFYDNTSEWD 477 Query: 1620 DFGEVINPDDYMIKDEDMDQASMRIDGDLNGKLDEGSAGLILDTTPSKVVSSEQTVYVKC 1799 +FGE+INPDDY+IKDEDMD+ +M D++G+LDE +A L+LDT PSKV+S+E V V C Sbjct: 478 EFGEIINPDDYVIKDEDMDRGAMHNGADVDGRLDEATASLMLDTRPSKVISNELIVTVSC 537 Query: 1800 SLVYMDFEGRSDGGSIKKILGHVAPLKLVLVHGSAEATEHLRQHCLKNVCPYVYAPQLEE 1979 SLV MD+EGRSDG SIK ++ HV+PLKLVLVH AEATEHL+QHCL N+CP+VYAPQ+EE Sbjct: 538 SLVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEE 597 Query: 1980 SIDVTSDLCAYKVQLSEKLMSNILFKKLGDYEIAWVDAEVGKTESGXXXXXXXXXXXXXH 2159 ++DVTSDLCAYKVQLSEKLMSN++FKKLGD E+AWVD+EVGKTES H Sbjct: 598 TVDVTSDLCAYKVQLSEKLMSNVVFKKLGDSEVAWVDSEVGKTESDMRSLQPMPSAALPH 657 Query: 2160 KTVLVGDIKMADFKQFLASKGIQVEFA-GGALRCGEYVTLRKVGDSSQKGGGN-IQHIIL 2333 K VLVGD+K+ADFKQFL+SKG+QVEFA GGALRCGEYVTLRKVG + QKGG + Q I++ Sbjct: 658 KPVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILI 717 Query: 2334 EGPLSDEYYKIRDHLYSQFYSL 2399 EGPL ++YYKIRD+LYSQFY L Sbjct: 718 EGPLCEDYYKIRDYLYSQFYLL 739