BLASTX nr result

ID: Rehmannia22_contig00003529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00003529
         (680 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004304268.1| PREDICTED: putative FBD-associated F-box pro...    67   7e-09
gb|EMT06445.1| hypothetical protein F775_11642 [Aegilops tauschii]     61   4e-07
ref|XP_004304305.1| PREDICTED: uncharacterized protein LOC101293...    59   1e-06

>ref|XP_004304268.1| PREDICTED: putative FBD-associated F-box protein At1g61330-like
           [Fragaria vesca subsp. vesca]
          Length = 491

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 40/106 (37%), Positives = 58/106 (54%)
 Frame = +3

Query: 33  LNNLNRLELNISYLSTFNLFSLIPLLHGCPLLQELHLSVRPRYYNLLDEEKHVVLHPHLK 212
           L NL +L+L++  L    L S++ +L   PLL+EL + VR   Y+          H HL+
Sbjct: 324 LRNLKKLKLDL-LLDDLELGSVLNILRTAPLLEELLMMVRALEYHGEIRNLCTFSHNHLR 382

Query: 213 NVEINGYGGTKHEIEFALYILKSAVRLQLMDISWHSSYYDRFGRWY 350
            V++ G+ G   EIEF + ILK A +L+ M I  H S+YD    WY
Sbjct: 383 RVKMQGFQGMWFEIEFTICILKIATKLESMVIDPHGSFYDGDETWY 428


>gb|EMT06445.1| hypothetical protein F775_11642 [Aegilops tauschii]
          Length = 398

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
 Frame = +3

Query: 21  GITMLNNLNRLELNISYLSTFNLFSLIPLLHGCPLLQELHLSVRPRYYNLLDEEKHVV-- 194
           G+T  ++L  L+L + +    NL SL   L G PLL+EL +    R + L D EK  +  
Sbjct: 250 GVTKFSHLKYLQLRLYFSGQDNLLSLASFLKGAPLLEELDIHFLRRSFPLNDFEKLSIRS 309

Query: 195 ----LHPHLKNVEINGYGGTKHEIEFALYILKSAVRLQLMDI 308
                H HLK V I G+ G + EIE A ++  ++ RLQ + I
Sbjct: 310 LPPCRHGHLKRVLITGFHGARGEIELAAHVADNSTRLQALVI 351


>ref|XP_004304305.1| PREDICTED: uncharacterized protein LOC101293024 [Fragaria vesca
           subsp. vesca]
          Length = 245

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 38/116 (32%), Positives = 60/116 (51%)
 Frame = +3

Query: 12  IDMGITMLNNLNRLELNISYLSTFNLFSLIPLLHGCPLLQELHLSVRPRYYNLLDEEKHV 191
           I   +    NL  L L++ +   F+L+S++ +L   P L+EL ++ R   Y     +   
Sbjct: 47  ISQTVPTFGNLKHLNLDL-FTPDFDLWSVLNILKAAPNLEELVITGRSYDYQGEMMDISG 105

Query: 192 VLHPHLKNVEINGYGGTKHEIEFALYILKSAVRLQLMDISWHSSYYDRFGRWYTQD 359
             H HL+ V+I  + G   EIEFA+ ILK A +L+ M I  H +Y+   G+W   D
Sbjct: 106 FSHNHLRKVKIQAFQGMWLEIEFAICILKIATKLEEMVIDPHGNYHIGGGKWIYLD 161


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