BLASTX nr result

ID: Rehmannia22_contig00003226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00003226
         (417 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF64710.1| putative transposase [Ipomoea tricolor]                44   2e-06

>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
          Length = 517

 Score = 44.3 bits (103), Expect(2) = 2e-06
 Identities = 16/42 (38%), Positives = 30/42 (71%)
 Frame = +2

Query: 263 IRYKLEIQVVDETGNVPLVLWDRDCEKLIGKPCAVLRREHLD 388
           +RY+++++ VD  GN P +LWD++C +L+G     LR++ L+
Sbjct: 343 LRYRVKVRAVDLDGNAPFILWDKECTELLGISATDLRQKILE 384



 Score = 33.1 bits (74), Expect(2) = 2e-06
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = +1

Query: 31  QIGSFWVCGTIISFIG--DWWYLSCPI--CPKKLSEAGDKLYCFGCDKFSETGHLR 186
           + G FWV   I+      DW+Y+SC    C KKL+       C  C +  + G LR
Sbjct: 289 EYGDFWVAAKIVGIESSWDWFYVSCKSHGCNKKLTLRNTLYDCDKCKRTWQEGILR 344


Top