BLASTX nr result
ID: Rehmannia22_contig00002967
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00002967
(312 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282858.1| PREDICTED: uncharacterized protein LOC100262... 59 2e-09
emb|CBI20780.3| unnamed protein product [Vitis vinifera] 59 2e-09
ref|XP_004244972.1| PREDICTED: small nuclear ribonucleoprotein-a... 67 3e-09
ref|XP_003593896.1| Small nuclear ribonucleoprotein-associated p... 53 1e-07
gb|EPS70464.1| hypothetical protein M569_04303, partial [Genlise... 62 1e-07
ref|XP_006355413.1| PREDICTED: small nuclear ribonucleoprotein-a... 61 1e-07
gb|EXB54844.1| hypothetical protein L484_005333 [Morus notabilis] 60 4e-07
ref|XP_006414113.1| hypothetical protein EUTSA_v10026609mg [Eutr... 51 1e-06
ref|XP_006285662.1| hypothetical protein CARUB_v10007117mg [Caps... 51 1e-06
ref|XP_002322446.1| small nuclear ribonucleoprotein [Populus tri... 57 2e-06
ref|XP_002868000.1| hypothetical protein ARALYDRAFT_914851 [Arab... 51 2e-06
ref|NP_680719.1| Small nuclear ribonucleoprotein family protein ... 50 2e-06
gb|AAR24165.1| At4g18372 [Arabidopsis thaliana] gi|40823882|gb|A... 50 2e-06
ref|XP_003542940.1| PREDICTED: uncharacterized protein LOC100792... 57 3e-06
gb|EOY27665.1| Small nuclear ribonucleoprotein family protein is... 56 6e-06
gb|EOY27664.1| Small nuclear ribonucleoprotein family protein is... 55 7e-06
gb|AFK39204.1| unknown [Lotus japonicus] 55 7e-06
>ref|XP_002282858.1| PREDICTED: uncharacterized protein LOC100262900 [Vitis vinifera]
Length = 116
Score = 59.3 bits (142), Expect(2) = 2e-09
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 203 SPMEYRVVDLILIPFSCRTFCHVDLPIEEQLSLLSL 310
SPME R + LILIPFSCRT CHVD IEEQLSLLSL
Sbjct: 79 SPMEQRCLGLILIPFSCRTSCHVDCSIEEQLSLLSL 114
Score = 28.5 bits (62), Expect(2) = 2e-09
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 148 NIILQDTVEHQSNRRYS 198
NIILQDTVE++S RR S
Sbjct: 61 NIILQDTVEYRSTRRSS 77
>emb|CBI20780.3| unnamed protein product [Vitis vinifera]
Length = 78
Score = 59.3 bits (142), Expect(2) = 2e-09
Identities = 29/36 (80%), Positives = 30/36 (83%)
Frame = +2
Query: 203 SPMEYRVVDLILIPFSCRTFCHVDLPIEEQLSLLSL 310
SPME R + LILIPFSCRT CHVD IEEQLSLLSL
Sbjct: 41 SPMEQRCLGLILIPFSCRTSCHVDCSIEEQLSLLSL 76
Score = 28.5 bits (62), Expect(2) = 2e-09
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 148 NIILQDTVEHQSNRRYS 198
NIILQDTVE++S RR S
Sbjct: 23 NIILQDTVEYRSTRRSS 39
>ref|XP_004244972.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
N-like isoform 1 [Solanum lycopersicum]
gi|460398877|ref|XP_004244973.1| PREDICTED: small
nuclear ribonucleoprotein-associated protein N-like
isoform 2 [Solanum lycopersicum]
Length = 118
Score = 66.6 bits (161), Expect = 3e-09
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 14/106 (13%)
Frame = +2
Query: 35 AEVSSNHSFHV*AQKTSKFVAYPKKMIHYRMLIGMLIGILFFKIP*SI------------ 178
++V S++ F +SK+V++ KK+++ RML+G+ G F I
Sbjct: 11 SDVGSSNQFET---NSSKYVSHVKKLLYRRMLVGISDGRFFLGTFYCIDKQGNIILQDAV 67
Query: 179 --RATDVILHSPMEYRVVDLILIPFSCRTFCHVDLPIEEQLSLLSL 310
R+T SPME RV+ LILIP SCR CHVD I+EQLSL+SL
Sbjct: 68 EYRSTRRSAPSPMEQRVLGLILIPSSCRKTCHVDCSIDEQLSLMSL 113
>ref|XP_003593896.1| Small nuclear ribonucleoprotein-associated protein B [Medicago
truncatula] gi|357447245|ref|XP_003593898.1| Small
nuclear ribonucleoprotein-associated protein B [Medicago
truncatula] gi|355482944|gb|AES64147.1| Small nuclear
ribonucleoprotein-associated protein B [Medicago
truncatula] gi|355482946|gb|AES64149.1| Small nuclear
ribonucleoprotein-associated protein B [Medicago
truncatula] gi|388515765|gb|AFK45944.1| unknown
[Medicago truncatula]
Length = 113
Score = 53.1 bits (126), Expect(2) = 1e-07
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +2
Query: 203 SPMEYRVVDLILIPFSCRTFCHVDLPIEEQLSLLSL 310
SPME R + LILIP SCR CHVD ++EQLSLLSL
Sbjct: 75 SPMEQRCIGLILIPSSCRMSCHVDCSVDEQLSLLSL 110
Score = 28.5 bits (62), Expect(2) = 1e-07
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 148 NIILQDTVEHQSNRRYS 198
NIILQDTVE++S RR S
Sbjct: 57 NIILQDTVEYRSTRRSS 73
>gb|EPS70464.1| hypothetical protein M569_04303, partial [Genlisea aurea]
Length = 101
Score = 61.6 bits (148), Expect = 1e-07
Identities = 40/91 (43%), Positives = 51/91 (56%), Gaps = 14/91 (15%)
Frame = +2
Query: 80 TSKFVAYPKKMIHYRMLIGMLIGILFFKI------P*SIRATDVILH--------SPMEY 217
+S ++ KK+IH +MLIG+ G F P +I D + + SPME
Sbjct: 7 SSHYIGEAKKLIHRQMLIGIKDGRFFLGSFYCIDKPGNIILQDAVEYRSMRRTSPSPMEQ 66
Query: 218 RVVDLILIPFSCRTFCHVDLPIEEQLSLLSL 310
R V LILIP +CR CHVD I+EQLSLLSL
Sbjct: 67 RGVGLILIPSTCRISCHVDCSIDEQLSLLSL 97
>ref|XP_006355413.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
N-like [Solanum tuberosum]
Length = 118
Score = 61.2 bits (147), Expect = 1e-07
Identities = 42/106 (39%), Positives = 56/106 (52%), Gaps = 14/106 (13%)
Frame = +2
Query: 35 AEVSSNHSFHV*AQKTSKFVAYPKKMIHYRMLIGMLIGILFFKIP*SI------------ 178
+EV S++ SK+V++ KK+++ RML+G+ G F I
Sbjct: 11 SEVGSSNQLET---NNSKYVSHVKKLLYRRMLVGISDGRFFLGTFYCIDKQGNIILQDAV 67
Query: 179 --RATDVILHSPMEYRVVDLILIPFSCRTFCHVDLPIEEQLSLLSL 310
R+T SPME RV+ LILIP CR CHVD I EQLSL+SL
Sbjct: 68 EYRSTRRSAPSPMEQRVLGLILIPSLCRKTCHVDCSIGEQLSLMSL 113
>gb|EXB54844.1| hypothetical protein L484_005333 [Morus notabilis]
Length = 104
Score = 59.7 bits (143), Expect = 4e-07
Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 14/107 (13%)
Frame = +2
Query: 32 QAEVSSNHSFHV*AQKTSKFVAYPKKMIHYRMLIGMLIGILFF--------------KIP 169
QAE SS+ + S+ ++ K++H RML+G+ G F +
Sbjct: 4 QAEKSSSEG------EKSEALSRVSKLVHRRMLVGIKDGRFFMGNFHCLDKQGNIILQDA 57
Query: 170 *SIRATDVILHSPMEYRVVDLILIPFSCRTFCHVDLPIEEQLSLLSL 310
R+T SPME R + LILIP SCR+ CHVD +EEQLSLLS+
Sbjct: 58 VEYRSTRRSSPSPMEQRCLGLILIPSSCRSSCHVDCSVEEQLSLLSI 104
>ref|XP_006414113.1| hypothetical protein EUTSA_v10026609mg [Eutrema salsugineum]
gi|557115283|gb|ESQ55566.1| hypothetical protein
EUTSA_v10026609mg [Eutrema salsugineum]
Length = 112
Score = 50.8 bits (120), Expect(2) = 1e-06
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +2
Query: 203 SPMEYRVVDLILIPFSCRTFCHVDLPIEEQLSLLSL 310
SP E R + +ILIP SCRT CHVD IEEQLSL+ L
Sbjct: 75 SPTEQRCLGMILIPSSCRTSCHVDCSIEEQLSLIQL 110
Score = 27.3 bits (59), Expect(2) = 1e-06
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 148 NIILQDTVEHQSNRRYS 198
NIILQDTVE++S RR S
Sbjct: 57 NIILQDTVEYRSIRRSS 73
>ref|XP_006285662.1| hypothetical protein CARUB_v10007117mg [Capsella rubella]
gi|482554367|gb|EOA18560.1| hypothetical protein
CARUB_v10007117mg [Capsella rubella]
Length = 109
Score = 50.8 bits (120), Expect(2) = 1e-06
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +2
Query: 203 SPMEYRVVDLILIPFSCRTFCHVDLPIEEQLSLLSL 310
SP E R + +ILIP SCRT CHVD IEEQLSL+ L
Sbjct: 72 SPTEQRCLGMILIPSSCRTSCHVDCSIEEQLSLIQL 107
Score = 27.3 bits (59), Expect(2) = 1e-06
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 148 NIILQDTVEHQSNRRYS 198
NIILQDTVE++S RR S
Sbjct: 54 NIILQDTVEYRSIRRSS 70
>ref|XP_002322446.1| small nuclear ribonucleoprotein [Populus trichocarpa]
gi|222869442|gb|EEF06573.1| small nuclear
ribonucleoprotein [Populus trichocarpa]
Length = 109
Score = 57.4 bits (137), Expect = 2e-06
Identities = 42/106 (39%), Positives = 56/106 (52%), Gaps = 14/106 (13%)
Frame = +2
Query: 29 QQAEVSSNHSFHV*AQKTSKFVAYPKKMIHYRMLIGMLIGILFFKIP*SI-RATDVILH- 202
++ E+SS S +S V+ +K++ RML+G+ G F I + ++IL
Sbjct: 3 EEMEISS--STQATESSSSDIVSRARKLLFRRMLVGIKDGRFFLGSFHCIDKQGNIILQD 60
Query: 203 ------------SPMEYRVVDLILIPFSCRTFCHVDLPIEEQLSLL 304
SPME R + LILIP SCRT CHVD IEEQLSLL
Sbjct: 61 AVEYRNTHRSSPSPMEQRCLGLILIPSSCRTSCHVDCSIEEQLSLL 106
>ref|XP_002868000.1| hypothetical protein ARALYDRAFT_914851 [Arabidopsis lyrata subsp.
lyrata] gi|297313836|gb|EFH44259.1| hypothetical protein
ARALYDRAFT_914851 [Arabidopsis lyrata subsp. lyrata]
Length = 112
Score = 50.8 bits (120), Expect(2) = 2e-06
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +2
Query: 203 SPMEYRVVDLILIPFSCRTFCHVDLPIEEQLSLLSL 310
SP E R + +ILIP SCRT CHVD IEEQLSL+ L
Sbjct: 75 SPTEQRCLGMILIPSSCRTSCHVDCSIEEQLSLIQL 110
Score = 26.2 bits (56), Expect(2) = 2e-06
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 148 NIILQDTVEHQSNRRYS 198
NIILQDTVE++S R+ S
Sbjct: 57 NIILQDTVEYRSIRKSS 73
>ref|NP_680719.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana] gi|332658634|gb|AEE84034.1| Small nuclear
ribonucleoprotein family protein [Arabidopsis thaliana]
Length = 112
Score = 49.7 bits (117), Expect(2) = 2e-06
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2
Query: 203 SPMEYRVVDLILIPFSCRTFCHVDLPIEEQLSLLSL 310
SP E R + +ILIP SCRT CHVD I+EQLSL+ L
Sbjct: 75 SPTEQRCLGMILIPSSCRTSCHVDCSIDEQLSLIQL 110
Score = 27.3 bits (59), Expect(2) = 2e-06
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 148 NIILQDTVEHQSNRRYS 198
NIILQDTVE++S RR S
Sbjct: 57 NIILQDTVEYRSIRRSS 73
>gb|AAR24165.1| At4g18372 [Arabidopsis thaliana] gi|40823882|gb|AAR92310.1|
At4g18372 [Arabidopsis thaliana]
Length = 78
Score = 49.7 bits (117), Expect(2) = 2e-06
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2
Query: 203 SPMEYRVVDLILIPFSCRTFCHVDLPIEEQLSLLSL 310
SP E R + +ILIP SCRT CHVD I+EQLSL+ L
Sbjct: 41 SPTEQRCLGMILIPSSCRTSCHVDCSIDEQLSLIQL 76
Score = 27.3 bits (59), Expect(2) = 2e-06
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 148 NIILQDTVEHQSNRRYS 198
NIILQDTVE++S RR S
Sbjct: 23 NIILQDTVEYRSIRRSS 39
>ref|XP_003542940.1| PREDICTED: uncharacterized protein LOC100792908 [Glycine max]
Length = 107
Score = 57.0 bits (136), Expect = 3e-06
Identities = 38/91 (41%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Frame = +2
Query: 80 TSKFVAYPKKMIHYRMLIGMLIGILFF--------------KIP*SIRATDVILHSPMEY 217
+S V+ +K++ RML+G+ G F + R+T SPME
Sbjct: 11 SSGTVSRARKLLFRRMLVGIKDGRFFLGSFYCIDKQGNIILQDAVEYRSTRQSSPSPMEQ 70
Query: 218 RVVDLILIPFSCRTFCHVDLPIEEQLSLLSL 310
R + LILIP SCRT CHVD I EQLSLLSL
Sbjct: 71 RCLGLILIPSSCRTSCHVDCAIHEQLSLLSL 101
>gb|EOY27665.1| Small nuclear ribonucleoprotein family protein isoform 2 [Theobroma
cacao]
Length = 140
Score = 55.8 bits (133), Expect = 6e-06
Identities = 36/83 (43%), Positives = 44/83 (53%), Gaps = 14/83 (16%)
Frame = +2
Query: 104 KKMIHYRMLIGMLIGILFFKIP*SI--------------RATDVILHSPMEYRVVDLILI 241
+K++ RML+G+ G F I R+T SPME R + LILI
Sbjct: 58 RKLLFRRMLVGIKDGRFFLGTFHCIDKQGNIILQDSIEYRSTRHSSPSPMEQRCLGLILI 117
Query: 242 PFSCRTFCHVDLPIEEQLSLLSL 310
PFSCRT CHVD I EQLSLL +
Sbjct: 118 PFSCRTSCHVDCSINEQLSLLKV 140
>gb|EOY27664.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
cacao]
Length = 123
Score = 55.5 bits (132), Expect = 7e-06
Identities = 36/81 (44%), Positives = 43/81 (53%), Gaps = 14/81 (17%)
Frame = +2
Query: 104 KKMIHYRMLIGMLIGILFFKIP*SI--------------RATDVILHSPMEYRVVDLILI 241
+K++ RML+G+ G F I R+T SPME R + LILI
Sbjct: 30 RKLLFRRMLVGIKDGRFFLGTFHCIDKQGNIILQDSIEYRSTRHSSPSPMEQRCLGLILI 89
Query: 242 PFSCRTFCHVDLPIEEQLSLL 304
PFSCRT CHVD I EQLSLL
Sbjct: 90 PFSCRTSCHVDCSINEQLSLL 110
>gb|AFK39204.1| unknown [Lotus japonicus]
Length = 111
Score = 55.5 bits (132), Expect = 7e-06
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Frame = +2
Query: 80 TSKFVAYPKKMIHYRMLIGMLIGILFF--------------KIP*SIRATDVILHSPMEY 217
+S V+ +K++ RML+G+ G F + R+T SPME
Sbjct: 18 SSSRVSRVRKLLFRRMLVGIKDGRFFLGGFYCIDKQGNIILQDAVEYRSTRRSSPSPMEQ 77
Query: 218 RVVDLILIPFSCRTFCHVDLPIEEQLSLLSL 310
R + LILIP SCR CHVD I+EQLSLLSL
Sbjct: 78 RCLGLILIPSSCRATCHVDCSIDEQLSLLSL 108