BLASTX nr result
ID: Rehmannia22_contig00002859
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00002859
(827 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citr... 237 3e-60
ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Popu... 236 6e-60
ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II su... 235 1e-59
ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II su... 233 8e-59
ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ri... 233 8e-59
gb|EOX92292.1| RNA polymerase II, Rpb4, core protein isoform 1 [... 232 1e-58
gb|EPS68209.1| hypothetical protein M569_06563 [Genlisea aurea] 231 2e-58
gb|ESW06234.1| hypothetical protein PHAVU_010G030200g [Phaseolus... 231 2e-58
gb|AFK35928.1| unknown [Lotus japonicus] 231 2e-58
ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527... 229 7e-58
ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycin... 229 7e-58
ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II su... 229 1e-57
ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 ... 228 2e-57
ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycin... 228 2e-57
gb|EMJ07326.1| hypothetical protein PRUPE_ppa013142mg [Prunus pe... 227 4e-57
ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Caps... 226 8e-57
ref|NP_196554.1| RNA polymerase II, Rpb4, core protein [Arabidop... 226 1e-56
ref|XP_002871392.1| RPB15.9 [Arabidopsis lyrata subsp. lyrata] g... 226 1e-56
gb|ABQ32301.1| putative 15.9 kDa subunit of RNA polymerase II [A... 225 2e-56
ref|NP_001236224.1| uncharacterized protein LOC100527704 [Glycin... 223 5e-56
>ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
gi|568884040|ref|XP_006494738.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4-like isoform X2 [Citrus
sinensis] gi|557530000|gb|ESR41250.1| hypothetical
protein CICLE_v10026735mg [Citrus clementina]
Length = 138
Score = 237 bits (605), Expect = 3e-60
Identities = 119/127 (93%), Positives = 123/127 (96%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI DEFLKAKCLMN EVA+ILDHKYEQLQQ +DDPMNQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGDEFLKAKCLMNCEVAIILDHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL
Sbjct: 72 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 131
Query: 595 ALIKKFE 615
+LIKKFE
Sbjct: 132 SLIKKFE 138
>ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Populus trichocarpa]
gi|224096326|ref|XP_002310604.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|222853507|gb|EEE91054.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|222856581|gb|EEE94128.1| hypothetical protein
POPTR_0005s08690g [Populus trichocarpa]
Length = 138
Score = 236 bits (603), Expect = 6e-60
Identities = 118/127 (92%), Positives = 124/127 (97%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI D+FLKAKCLMN EVALIL+HKYEQLQQM+DDPMNQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGDDFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKT+GRAHDDEAIEKMLNDL
Sbjct: 72 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLNDL 131
Query: 595 ALIKKFE 615
+LIKKFE
Sbjct: 132 SLIKKFE 138
>ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4 [Vitis
vinifera] gi|147856183|emb|CAN80281.1| hypothetical
protein VITISV_017448 [Vitis vinifera]
gi|302143481|emb|CBI22042.3| unnamed protein product
[Vitis vinifera]
Length = 138
Score = 235 bits (600), Expect = 1e-59
Identities = 117/127 (92%), Positives = 124/127 (97%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI DEFLKAKCLMN EVA+IL+HKYEQLQQM+DDP+NQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGDEFLKAKCLMNCEVAVILEHKYEQLQQMSDDPLNQVSQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKT+GRAHDDEAIEKMLNDL
Sbjct: 72 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLNDL 131
Query: 595 ALIKKFE 615
+LIKKFE
Sbjct: 132 SLIKKFE 138
>ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like [Cicer
arietinum] gi|502155876|ref|XP_004510223.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB4-like [Cicer
arietinum]
Length = 138
Score = 233 bits (593), Expect = 8e-59
Identities = 117/127 (92%), Positives = 122/127 (96%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI DEFLKAKCLMN EV+LILDHKYEQLQQ +DDPMNQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGDEFLKAKCLMNCEVSLILDHKYEQLQQSSDDPMNQVSQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRA DDEAIEKMLNDL
Sbjct: 72 DAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDL 131
Query: 595 ALIKKFE 615
+LIKKFE
Sbjct: 132 SLIKKFE 138
>ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223538818|gb|EEF40418.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 138
Score = 233 bits (593), Expect = 8e-59
Identities = 116/127 (91%), Positives = 123/127 (96%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI DEFLKAKCLMN EVALIL+HKYEQLQQM++DPMNQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSNDPMNQVSQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKT+GRAHDDEAIEKML DL
Sbjct: 72 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLTDL 131
Query: 595 ALIKKFE 615
++IKKFE
Sbjct: 132 SMIKKFE 138
>gb|EOX92292.1| RNA polymerase II, Rpb4, core protein isoform 1 [Theobroma cacao]
gi|508700397|gb|EOX92293.1| RNA polymerase II, Rpb4,
core protein isoform 1 [Theobroma cacao]
Length = 138
Score = 232 bits (592), Expect = 1e-58
Identities = 115/127 (90%), Positives = 124/127 (97%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI +EFLKAKCLMN EVALIL+HKYEQLQQM++DPMNQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGEEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQVSQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKT+GRAHDD+AIE+MLNDL
Sbjct: 72 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDDAIERMLNDL 131
Query: 595 ALIKKFE 615
+LIKKFE
Sbjct: 132 SLIKKFE 138
>gb|EPS68209.1| hypothetical protein M569_06563 [Genlisea aurea]
Length = 138
Score = 231 bits (590), Expect = 2e-58
Identities = 117/127 (92%), Positives = 121/127 (95%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKIPDEFLKAKCLMN EVALIL+HKYEQLQQ ADDPMNQMSQVFEKS QYVKRFSRYKN
Sbjct: 12 LKIPDEFLKAKCLMNCEVALILEHKYEQLQQTADDPMNQMSQVFEKSHQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAI+MVPSIK +GRA DDEAIEKMLNDL
Sbjct: 72 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAISMVPSIKAKGRALDDEAIEKMLNDL 131
Query: 595 ALIKKFE 615
+LIKKFE
Sbjct: 132 SLIKKFE 138
>gb|ESW06234.1| hypothetical protein PHAVU_010G030200g [Phaseolus vulgaris]
Length = 138
Score = 231 bits (589), Expect = 2e-58
Identities = 116/127 (91%), Positives = 122/127 (96%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI DEFLKAKCLMN EV+LIL+HKYEQLQQ +DDPMNQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRA DDEAIEKMLNDL
Sbjct: 72 DAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDL 131
Query: 595 ALIKKFE 615
+LIKKFE
Sbjct: 132 SLIKKFE 138
>gb|AFK35928.1| unknown [Lotus japonicus]
Length = 138
Score = 231 bits (589), Expect = 2e-58
Identities = 116/127 (91%), Positives = 122/127 (96%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI DEFLKAKCLMN EV+LIL+HKYEQLQQ +DDPMNQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDPMNQVSQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRA DDEAIEKMLNDL
Sbjct: 72 DAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDL 131
Query: 595 ALIKKFE 615
+LIKKFE
Sbjct: 132 SLIKKFE 138
>ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527704 isoform X1 [Glycine
max]
Length = 138
Score = 229 bits (585), Expect = 7e-58
Identities = 115/127 (90%), Positives = 122/127 (96%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI DEFLKAKCLMN EVALIL+HKYEQLQQ +DDPMNQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVREIL+RY+LAEFELCVLGNLCPETVEEAIAMVPSIK+RGRA DDEAIEKMLNDL
Sbjct: 72 DAVRQVREILARYELAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQDDEAIEKMLNDL 131
Query: 595 ALIKKFE 615
+LIKKFE
Sbjct: 132 SLIKKFE 138
>ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycine max]
gi|255625623|gb|ACU13156.1| unknown [Glycine max]
Length = 138
Score = 229 bits (585), Expect = 7e-58
Identities = 115/127 (90%), Positives = 122/127 (96%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI DEFLKAKCLMN EV+LIL+HKYEQLQQ +DDPMNQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQISQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSIK+RGRA DDEAIEKMLNDL
Sbjct: 72 DAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQDDEAIEKMLNDL 131
Query: 595 ALIKKFE 615
+LIKKFE
Sbjct: 132 SLIKKFE 138
>ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4-like
[Cucumis sativus] gi|449526195|ref|XP_004170099.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB4-like [Cucumis sativus]
Length = 138
Score = 229 bits (583), Expect = 1e-57
Identities = 112/127 (88%), Positives = 122/127 (96%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI DEFLKAKCLMN EV+LIL+HKYEQLQQM++DP NQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVRE+LSRYQLAEFELCVLGNLCPETVEEAIAMVPS+KT+GR HDDEAIEKMLNDL
Sbjct: 72 DAVRQVREVLSRYQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRVHDDEAIEKMLNDL 131
Query: 595 ALIKKFE 615
+LIK+FE
Sbjct: 132 SLIKRFE 138
>ref|XP_003626907.1| DNA-directed RNA polymerase II subunit RPB4 [Medicago truncatula]
gi|355520929|gb|AET01383.1| DNA-directed RNA polymerase
II subunit RPB4 [Medicago truncatula]
gi|388497296|gb|AFK36714.1| unknown [Medicago
truncatula]
Length = 138
Score = 228 bits (581), Expect = 2e-57
Identities = 115/127 (90%), Positives = 121/127 (95%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI DEFLKAKCLMN EV+LIL+HKYEQLQQ +DD MNQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDAMNQVSQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRA DDEAIEKMLNDL
Sbjct: 72 DAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDL 131
Query: 595 ALIKKFE 615
+LIKKFE
Sbjct: 132 SLIKKFE 138
>ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycine max]
gi|255632071|gb|ACU16388.1| unknown [Glycine max]
Length = 138
Score = 228 bits (581), Expect = 2e-57
Identities = 114/127 (89%), Positives = 122/127 (96%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI DEFLKAKCLMN EV+LIL+HKYEQLQQ +DDPMNQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIA+VPSIK+RGRA DDEAIEKMLNDL
Sbjct: 72 DAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAVVPSIKSRGRAQDDEAIEKMLNDL 131
Query: 595 ALIKKFE 615
+LIKKFE
Sbjct: 132 SLIKKFE 138
>gb|EMJ07326.1| hypothetical protein PRUPE_ppa013142mg [Prunus persica]
Length = 138
Score = 227 bits (578), Expect = 4e-57
Identities = 112/127 (88%), Positives = 120/127 (94%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI DEFLKAKCLMN EVALIL+HKY+QLQQM+DDP NQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGDEFLKAKCLMNCEVALILEHKYDQLQQMSDDPRNQVSQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAV+QVREILSRYQL EFELCVLGNLCPETVEEAIAMVPSIK +GR HDD+AI+KMLNDL
Sbjct: 72 DAVKQVREILSRYQLTEFELCVLGNLCPETVEEAIAMVPSIKAKGRVHDDDAIDKMLNDL 131
Query: 595 ALIKKFE 615
ALIKKFE
Sbjct: 132 ALIKKFE 138
>ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Capsella rubella]
gi|482557570|gb|EOA21762.1| hypothetical protein
CARUB_v10002229mg [Capsella rubella]
Length = 138
Score = 226 bits (576), Expect = 8e-57
Identities = 109/127 (85%), Positives = 123/127 (96%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI DEFLKAKCLMN EV+LIL+HKYEQLQQ+++DPMNQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGDEFLKAKCLMNCEVSLILEHKYEQLQQVSEDPMNQVSQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVREILSR+QL EFELCVLGNLCPETVEEA+AMVPS+KT+GRAHDD+AIEKMLNDL
Sbjct: 72 DAVRQVREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHDDDAIEKMLNDL 131
Query: 595 ALIKKFE 615
+L+K+FE
Sbjct: 132 SLVKRFE 138
>ref|NP_196554.1| RNA polymerase II, Rpb4, core protein [Arabidopsis thaliana]
gi|75098524|sp|O48890.1|NRPB4_ARATH RecName:
Full=DNA-directed RNA polymerase II subunit 4; AltName:
Full=15.9 kDa subunit of RNA polymerase II; AltName:
Full=DNA-directed RNA polymerase II subunit D
gi|2760362|gb|AAB95261.1| 15.9 kDa subunit of RNA
polymerase II [Arabidopsis thaliana]
gi|9758970|dbj|BAB09413.1| 15.9 kDa subunit of RNA
polymerase II [Arabidopsis thaliana]
gi|21554212|gb|AAM63291.1| 15.9 kDa subunit of RNA
polymerase II [Arabidopsis thaliana]
gi|98960869|gb|ABF58918.1| At5g09920 [Arabidopsis
thaliana] gi|222423668|dbj|BAH19801.1| AT5G09920
[Arabidopsis thaliana] gi|332004084|gb|AED91467.1| RNA
polymerase II, Rpb4, core protein [Arabidopsis thaliana]
Length = 138
Score = 226 bits (575), Expect = 1e-56
Identities = 109/127 (85%), Positives = 123/127 (96%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI DEFLKAKCLMN EV+LIL+HK+EQLQQ+++DPMNQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGDEFLKAKCLMNCEVSLILEHKFEQLQQISEDPMNQVSQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVREILSR+QL EFELCVLGNLCPETVEEA+AMVPS+KT+GRAHDDEAIEKMLNDL
Sbjct: 72 DAVRQVREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHDDEAIEKMLNDL 131
Query: 595 ALIKKFE 615
+L+K+FE
Sbjct: 132 SLVKRFE 138
>ref|XP_002871392.1| RPB15.9 [Arabidopsis lyrata subsp. lyrata]
gi|297317229|gb|EFH47651.1| RPB15.9 [Arabidopsis lyrata
subsp. lyrata]
Length = 138
Score = 226 bits (575), Expect = 1e-56
Identities = 109/127 (85%), Positives = 123/127 (96%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI DEFLKAKCLMN EV+LIL+HK+EQLQQ+++DPMNQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGDEFLKAKCLMNCEVSLILEHKFEQLQQVSEDPMNQVSQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVREILSR+QL EFELCVLGNLCPETVEEA+AMVPS+KT+GRAHDDEAIEKMLNDL
Sbjct: 72 DAVRQVREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHDDEAIEKMLNDL 131
Query: 595 ALIKKFE 615
+L+K+FE
Sbjct: 132 SLVKRFE 138
>gb|ABQ32301.1| putative 15.9 kDa subunit of RNA polymerase II [Artemisia annua]
Length = 138
Score = 225 bits (573), Expect = 2e-56
Identities = 112/127 (88%), Positives = 120/127 (94%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI DEFLKAKCLMN EV+LILDHK EQLQ M+DDP NQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGDEFLKAKCLMNCEVSLILDHKLEQLQAMSDDPSNQVSQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVRE+LSR+QLAEFELCVLGNLCPETVEEAIAMVPSIK+RGR HDDEAIEKMLND+
Sbjct: 72 DAVRQVRELLSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRGHDDEAIEKMLNDM 131
Query: 595 ALIKKFE 615
+LIKKFE
Sbjct: 132 SLIKKFE 138
>ref|NP_001236224.1| uncharacterized protein LOC100527704 [Glycine max]
gi|255632992|gb|ACU16850.1| unknown [Glycine max]
Length = 195
Score = 223 bits (569), Expect = 5e-56
Identities = 112/124 (90%), Positives = 119/124 (95%)
Frame = +1
Query: 235 LKIPDEFLKAKCLMNSEVALILDHKYEQLQQMADDPMNQMSQVFEKSLQYVKRFSRYKNT 414
LKI DEFLKAKCLMN EVALIL+HKYEQLQQ +DDPMNQ+SQVFEKSLQYVKRFSRYKN
Sbjct: 12 LKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNP 71
Query: 415 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEAIEKMLNDL 594
DAVRQVREIL+RY+LAEFELCVLGNLCPETVEEAIAMVPSIK+RGRA DDEAIEKMLNDL
Sbjct: 72 DAVRQVREILARYELAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQDDEAIEKMLNDL 131
Query: 595 ALIK 606
+LIK
Sbjct: 132 SLIK 135