BLASTX nr result
ID: Rehmannia22_contig00002259
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00002259
(325 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006351799.1| PREDICTED: chlorophyll a-b binding protein C... 102 4e-20
ref|XP_004230588.1| PREDICTED: chlorophyll a-b binding protein C... 102 7e-20
ref|XP_004300703.1| PREDICTED: chlorophyll a-b binding protein C... 100 3e-19
gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr... 99 5e-19
ref|XP_003531041.1| PREDICTED: chlorophyll a-b binding protein C... 99 5e-19
gb|ACU23773.1| unknown [Glycine max] 99 5e-19
gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotia... 99 6e-19
gb|ESW31081.1| hypothetical protein PHAVU_002G207500g [Phaseolus... 99 8e-19
gb|AFK41475.1| unknown [Lotus japonicus] 99 8e-19
emb|CBI20065.3| unnamed protein product [Vitis vinifera] 98 1e-18
ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein C... 98 1e-18
gb|AGV54678.1| chlorophyll A/B binding protein CP24 10A chloropl... 96 4e-18
ref|XP_004485563.1| PREDICTED: chlorophyll a-b binding protein C... 96 4e-18
ref|XP_002533515.1| chlorophyll A/B binding protein, putative [R... 96 5e-18
ref|XP_006494019.1| PREDICTED: chlorophyll a-b binding protein C... 94 1e-17
ref|XP_006423921.1| hypothetical protein CICLE_v10029116mg [Citr... 94 1e-17
ref|NP_001236415.1| uncharacterized protein LOC100527463 [Glycin... 94 2e-17
ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein C... 93 3e-17
gb|ACU15016.1| unknown [Glycine max] 93 3e-17
ref|XP_002298178.1| chlorophyll A-B binding family protein [Popu... 93 3e-17
>ref|XP_006351799.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Solanum tuberosum]
Length = 256
Score = 102 bits (255), Expect = 4e-20
Identities = 50/77 (64%), Positives = 60/77 (77%)
Frame = -3
Query: 233 SSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXPKRLIVVAAAAKKSWIPAVKG 54
++TSAA++NGL S+FLTGGKKSQALL+ PKR IVVAAA KKSW+P V+G
Sbjct: 2 ATTSAAVLNGLSSSFLTGGKKSQALLAAPLAARVGGAATPKRFIVVAAAPKKSWLPGVRG 61
Query: 53 GGNFIDPEWLNGSLPGD 3
GGN +DPEWL+GSLPGD
Sbjct: 62 GGNLVDPEWLDGSLPGD 78
>ref|XP_004230588.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Solanum lycopersicum]
gi|115833|sp|P27524.1|CB4A_SOLLC RecName:
Full=Chlorophyll a-b binding protein CP24 10A,
chloroplastic; Short=CAB-10A; Short=LHCP; Flags:
Precursor gi|170394|gb|AAA34143.1| a-binding protein
[Solanum lycopersicum]
Length = 256
Score = 102 bits (253), Expect = 7e-20
Identities = 50/77 (64%), Positives = 60/77 (77%)
Frame = -3
Query: 233 SSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXPKRLIVVAAAAKKSWIPAVKG 54
++TSAA++NGL S+FLTGG KSQALL+ PKR V+AAAAKKSWIPAV+G
Sbjct: 2 ATTSAAVLNGLSSSFLTGGNKSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVRG 61
Query: 53 GGNFIDPEWLNGSLPGD 3
GGN +DPEWL+GSLPGD
Sbjct: 62 GGNLVDPEWLDGSLPGD 78
>ref|XP_004300703.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 257
Score = 99.8 bits (247), Expect = 3e-19
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -3
Query: 233 SSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXP-KRLIVVAAAAKKSWIPAVK 57
++T+ A++NGL S FL GGK+SQ+LLS KR +VVAAAAKKSWIPAVK
Sbjct: 2 AATTGAMLNGLNSTFLCGGKRSQSLLSAGAAARVGGSVVAPKRFVVVAAAAKKSWIPAVK 61
Query: 56 GGGNFIDPEWLNGSLPGD 3
GGGNFIDPEWL+GSLPGD
Sbjct: 62 GGGNFIDPEWLDGSLPGD 79
>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
Length = 258
Score = 99.4 bits (246), Expect = 5e-19
Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -3
Query: 239 MASSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXPKRLIVVAAAA-KKSWIPA 63
MA++TS A++NGLGS+FL+GG +SQ LL+ P+RLIVVAAAA KKSWIP
Sbjct: 1 MAAATSGAVLNGLGSSFLSGGSRSQTLLATSIGGKVGVAVSPRRLIVVAAAAPKKSWIPG 60
Query: 62 VKGGGNFIDPEWLNGSLPGD 3
V+GGGN +DPEWL+GSLPGD
Sbjct: 61 VRGGGNLVDPEWLDGSLPGD 80
>ref|XP_003531041.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like isoform 1 [Glycine max]
Length = 258
Score = 99.4 bits (246), Expect = 5e-19
Identities = 52/80 (65%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -3
Query: 239 MASSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXPKRLIV-VAAAAKKSWIPA 63
MA++TS+A++NG GS FL GGK+S ALL+ PKR+IV VAAA KKSWIPA
Sbjct: 1 MAAATSSAVLNGFGSHFLCGGKRSHALLAASIGGKVGASVSPKRVIVAVAAAPKKSWIPA 60
Query: 62 VKGGGNFIDPEWLNGSLPGD 3
VKGGG+FIDPEWL+GSLPGD
Sbjct: 61 VKGGGSFIDPEWLDGSLPGD 80
>gb|ACU23773.1| unknown [Glycine max]
Length = 258
Score = 99.4 bits (246), Expect = 5e-19
Identities = 52/80 (65%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -3
Query: 239 MASSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXPKRLIV-VAAAAKKSWIPA 63
MA++TS+A++NG GS FL GGK+S ALL+ PKR+IV VAAA KKSWIPA
Sbjct: 1 MAAATSSAVLNGFGSHFLCGGKRSHALLAASIGGKVGASVSPKRVIVAVAAAPKKSWIPA 60
Query: 62 VKGGGNFIDPEWLNGSLPGD 3
VKGGG+FIDPEWL+GSLPGD
Sbjct: 61 VKGGGSFIDPEWLDGSLPGD 80
>gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotiana tabacum]
Length = 257
Score = 99.0 bits (245), Expect = 6e-19
Identities = 52/78 (66%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -3
Query: 233 SSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXPKRLIVVAAAA-KKSWIPAVK 57
++TSAA++NGL S+FLTGGK SQALL PKR IV AAAA KKSWIPAVK
Sbjct: 2 ATTSAAVLNGLSSSFLTGGKNSQALLGAPVAARIGGLATPKRCIVAAAAAPKKSWIPAVK 61
Query: 56 GGGNFIDPEWLNGSLPGD 3
GGGN +DPEWL+GSLPGD
Sbjct: 62 GGGNLLDPEWLDGSLPGD 79
>gb|ESW31081.1| hypothetical protein PHAVU_002G207500g [Phaseolus vulgaris]
Length = 258
Score = 98.6 bits (244), Expect = 8e-19
Identities = 53/80 (66%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Frame = -3
Query: 239 MASSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXPKRLIV-VAAAAKKSWIPA 63
MA +TS A++N GS FL GGK+SQALL+ PKRLIV VAAA KKSWIP+
Sbjct: 1 MAVATSGAVLNRFGSNFLCGGKRSQALLAAGIGAKVGAAVNPKRLIVAVAAAPKKSWIPS 60
Query: 62 VKGGGNFIDPEWLNGSLPGD 3
VKGGGNFIDPEWL+GSLPGD
Sbjct: 61 VKGGGNFIDPEWLDGSLPGD 80
>gb|AFK41475.1| unknown [Lotus japonicus]
Length = 260
Score = 98.6 bits (244), Expect = 8e-19
Identities = 51/80 (63%), Positives = 60/80 (75%), Gaps = 2/80 (2%)
Frame = -3
Query: 236 ASSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXPKRLIVVAAAA--KKSWIPA 63
A++TS A++NGLGS+FL GG +SQ LL+ PKRLIV AAAA KKSWIPA
Sbjct: 3 AAATSGAVLNGLGSSFLCGGNRSQTLLASAAGAKAGAAVSPKRLIVAAAAAAPKKSWIPA 62
Query: 62 VKGGGNFIDPEWLNGSLPGD 3
VKGGGN +DPEWL+GSLPGD
Sbjct: 63 VKGGGNLVDPEWLDGSLPGD 82
>emb|CBI20065.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 97.8 bits (242), Expect = 1e-18
Identities = 49/78 (62%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -3
Query: 233 SSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXP-KRLIVVAAAAKKSWIPAVK 57
++TSAA++NGLGS FLTGGK+SQ+LLS +RLIVVAAA KKSW+P VK
Sbjct: 2 AATSAAVLNGLGSPFLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAAAPKKSWLPGVK 61
Query: 56 GGGNFIDPEWLNGSLPGD 3
GGN +DPEWL+GSLPGD
Sbjct: 62 AGGNLVDPEWLDGSLPGD 79
>ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
[Vitis vinifera] gi|147804704|emb|CAN71620.1|
hypothetical protein VITISV_015544 [Vitis vinifera]
Length = 257
Score = 97.8 bits (242), Expect = 1e-18
Identities = 49/78 (62%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -3
Query: 233 SSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXP-KRLIVVAAAAKKSWIPAVK 57
++TSAA++NGLGS FLTGGK+SQ+LLS +RLIVVAAA KKSW+P VK
Sbjct: 2 AATSAAVLNGLGSPFLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAAAPKKSWLPGVK 61
Query: 56 GGGNFIDPEWLNGSLPGD 3
GGN +DPEWL+GSLPGD
Sbjct: 62 AGGNLVDPEWLDGSLPGD 79
>gb|AGV54678.1| chlorophyll A/B binding protein CP24 10A chloroplastic [Phaseolus
vulgaris] gi|561021646|gb|ESW20417.1| hypothetical
protein PHAVU_006G207300g [Phaseolus vulgaris]
Length = 258
Score = 96.3 bits (238), Expect = 4e-18
Identities = 48/80 (60%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Frame = -3
Query: 239 MASSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXPKRLIVVAAAA-KKSWIPA 63
MA++TS A++NGLGS+FL+GG +SQ LL+ P+RLIVVAAAA KKSW+P
Sbjct: 1 MAAATSGAVLNGLGSSFLSGGSRSQTLLATAIGGKLGVAVSPRRLIVVAAAAPKKSWLPG 60
Query: 62 VKGGGNFIDPEWLNGSLPGD 3
V+ GGN +DPEWL+GSLPGD
Sbjct: 61 VRAGGNLVDPEWLDGSLPGD 80
>ref|XP_004485563.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Cicer arietinum]
Length = 260
Score = 96.3 bits (238), Expect = 4e-18
Identities = 51/82 (62%), Positives = 62/82 (75%), Gaps = 3/82 (3%)
Frame = -3
Query: 239 MASSTSAALVNGLGSAFLTGGKKSQALL--SXXXXXXXXXXXXPKRLIVVAAAA-KKSWI 69
MA++TS A++NGLGS+FL GGK+SQ LL + P+RL+V AAAA KKSWI
Sbjct: 1 MAAATSGAVLNGLGSSFLCGGKRSQTLLLATAIGGKVGAAAVSPRRLVVAAAAAPKKSWI 60
Query: 68 PAVKGGGNFIDPEWLNGSLPGD 3
P V+GGGNFIDPEWL+GSLPGD
Sbjct: 61 PGVRGGGNFIDPEWLDGSLPGD 82
>ref|XP_002533515.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223526625|gb|EEF28871.1| chlorophyll A/B binding
protein, putative [Ricinus communis]
Length = 256
Score = 95.9 bits (237), Expect = 5e-18
Identities = 49/79 (62%), Positives = 58/79 (73%)
Frame = -3
Query: 239 MASSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXPKRLIVVAAAAKKSWIPAV 60
MA++TS A++NGLGS+FL G K+S ALLS K +V+AA KKSWIPAV
Sbjct: 1 MAAATSGAVLNGLGSSFLRGPKRSHALLSAIGANRTASGASTK-FVVMAAQPKKSWIPAV 59
Query: 59 KGGGNFIDPEWLNGSLPGD 3
KGGGNFIDPEWL+GSLPGD
Sbjct: 60 KGGGNFIDPEWLDGSLPGD 78
>ref|XP_006494019.1| PREDICTED: chlorophyll a-b binding protein CP24 10B,
chloroplastic-like [Citrus sinensis]
Length = 253
Score = 94.4 bits (233), Expect = 1e-17
Identities = 47/79 (59%), Positives = 58/79 (73%)
Frame = -3
Query: 239 MASSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXPKRLIVVAAAAKKSWIPAV 60
MA++TS A++NGLGS+F+ GGKKSQALL+ K ++V A KKSWIPAV
Sbjct: 1 MAAATSGAVLNGLGSSFINGGKKSQALLAGTNRVTSSK----KSVVVAALPPKKSWIPAV 56
Query: 59 KGGGNFIDPEWLNGSLPGD 3
KGGGN I+PEWL+GSLPGD
Sbjct: 57 KGGGNLINPEWLDGSLPGD 75
>ref|XP_006423921.1| hypothetical protein CICLE_v10029116mg [Citrus clementina]
gi|557525855|gb|ESR37161.1| hypothetical protein
CICLE_v10029116mg [Citrus clementina]
Length = 253
Score = 94.4 bits (233), Expect = 1e-17
Identities = 47/79 (59%), Positives = 58/79 (73%)
Frame = -3
Query: 239 MASSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXPKRLIVVAAAAKKSWIPAV 60
MA++TS A++NGLGS+F+ GGKKSQALL+ K ++V A KKSWIPAV
Sbjct: 1 MAAATSGAVLNGLGSSFINGGKKSQALLAGTNRVTSSK----KSVVVAALPPKKSWIPAV 56
Query: 59 KGGGNFIDPEWLNGSLPGD 3
KGGGN I+PEWL+GSLPGD
Sbjct: 57 KGGGNLINPEWLDGSLPGD 75
>ref|NP_001236415.1| uncharacterized protein LOC100527463 [Glycine max]
gi|255632410|gb|ACU16555.1| unknown [Glycine max]
Length = 259
Score = 93.6 bits (231), Expect = 2e-17
Identities = 48/82 (58%), Positives = 61/82 (74%), Gaps = 3/82 (3%)
Frame = -3
Query: 239 MASSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXP--KRLIVVAAAA-KKSWI 69
MA++TS A++NGLGS+FL+GG +SQ LL+ +RLIVVAAAA KKSW+
Sbjct: 1 MAAATSGAVLNGLGSSFLSGGNRSQTLLATAIGGKVGAAVTVNPRRLIVVAAAAPKKSWL 60
Query: 68 PAVKGGGNFIDPEWLNGSLPGD 3
P V+GGGN +DPEWL+GSLPGD
Sbjct: 61 PGVRGGGNLVDPEWLDGSLPGD 82
>ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
[Glycine max]
Length = 261
Score = 93.2 bits (230), Expect = 3e-17
Identities = 48/83 (57%), Positives = 61/83 (73%), Gaps = 4/83 (4%)
Frame = -3
Query: 239 MASSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXP---KRLIVVAAAA-KKSW 72
MA++TS A++NGLGS+FL+GG +SQ LL+ +RLIVVAAAA KKSW
Sbjct: 1 MAAATSGAVLNGLGSSFLSGGNRSQTLLATAIGGKVGAAAVTVSPRRLIVVAAAAPKKSW 60
Query: 71 IPAVKGGGNFIDPEWLNGSLPGD 3
+P V+GGGN +DPEWL+GSLPGD
Sbjct: 61 LPGVRGGGNLVDPEWLDGSLPGD 83
>gb|ACU15016.1| unknown [Glycine max]
Length = 247
Score = 93.2 bits (230), Expect = 3e-17
Identities = 48/83 (57%), Positives = 61/83 (73%), Gaps = 4/83 (4%)
Frame = -3
Query: 239 MASSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXP---KRLIVVAAAA-KKSW 72
MA++TS A++NGLGS+FL+GG +SQ LL+ +RLIVVAAAA KKSW
Sbjct: 1 MAAATSGAVLNGLGSSFLSGGNRSQTLLATAIGGKVGAAAVTVSPRRLIVVAAAAPKKSW 60
Query: 71 IPAVKGGGNFIDPEWLNGSLPGD 3
+P V+GGGN +DPEWL+GSLPGD
Sbjct: 61 LPGVRGGGNLVDPEWLDGSLPGD 83
>ref|XP_002298178.1| chlorophyll A-B binding family protein [Populus trichocarpa]
gi|118486723|gb|ABK95197.1| unknown [Populus
trichocarpa] gi|222845436|gb|EEE82983.1| chlorophyll A-B
binding family protein [Populus trichocarpa]
Length = 257
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/78 (57%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = -3
Query: 233 SSTSAALVNGLGSAFLTGGKKSQALLSXXXXXXXXXXXXPKRLIVVAAAA-KKSWIPAVK 57
++T+ A++NGLGS+FL GGK++QALL ++L+VVAAA KKSWIPAVK
Sbjct: 2 AATAGAVLNGLGSSFLCGGKRNQALLGIGASRTGSFPVGTRKLVVVAAAQPKKSWIPAVK 61
Query: 56 GGGNFIDPEWLNGSLPGD 3
GGG+ +DPEWL+GSLPGD
Sbjct: 62 GGGSLVDPEWLDGSLPGD 79