BLASTX nr result
ID: Rehmannia22_contig00002258
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00002258
(394 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006351799.1| PREDICTED: chlorophyll a-b binding protein C... 131 8e-29
ref|XP_004230588.1| PREDICTED: chlorophyll a-b binding protein C... 130 1e-28
gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotia... 125 4e-27
ref|XP_004300703.1| PREDICTED: chlorophyll a-b binding protein C... 125 8e-27
emb|CBI20065.3| unnamed protein product [Vitis vinifera] 122 5e-26
ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein C... 122 5e-26
gb|ESW31081.1| hypothetical protein PHAVU_002G207500g [Phaseolus... 118 7e-25
ref|XP_003531041.1| PREDICTED: chlorophyll a-b binding protein C... 118 9e-25
gb|ACU23773.1| unknown [Glycine max] 118 9e-25
gb|AFK41475.1| unknown [Lotus japonicus] 116 3e-24
gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr... 115 8e-24
gb|AGV54678.1| chlorophyll A/B binding protein CP24 10A chloropl... 111 9e-23
ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein C... 111 9e-23
ref|NP_001236415.1| uncharacterized protein LOC100527463 [Glycin... 111 9e-23
gb|ACU15016.1| unknown [Glycine max] 111 9e-23
ref|XP_004485563.1| PREDICTED: chlorophyll a-b binding protein C... 110 1e-22
gb|EMJ24688.1| hypothetical protein PRUPE_ppa010195mg [Prunus pe... 110 3e-22
ref|XP_006351797.1| PREDICTED: chlorophyll a-b binding protein C... 109 3e-22
ref|XP_002533515.1| chlorophyll A/B binding protein, putative [R... 107 2e-21
ref|XP_004230586.1| PREDICTED: chlorophyll a-b binding protein C... 105 5e-21
>ref|XP_006351799.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Solanum tuberosum]
Length = 256
Score = 131 bits (330), Expect = 8e-29
Identities = 61/78 (78%), Positives = 70/78 (89%)
Frame = -1
Query: 235 STTSAALVNGLGSAFLTGGKKSQALLSAPIAARGGGAVAPKRLIVVAAAAKKSWIPAVKG 56
+TTSAA++NGL S+FLTGGKKSQALL+AP+AAR GGA PKR IVVAAA KKSW+P V+G
Sbjct: 2 ATTSAAVLNGLSSSFLTGGKKSQALLAAPLAARVGGAATPKRFIVVAAAPKKSWLPGVRG 61
Query: 55 GGNFIDPEWLDGSLPGDY 2
GGN +DPEWLDGSLPGDY
Sbjct: 62 GGNLVDPEWLDGSLPGDY 79
>ref|XP_004230588.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Solanum lycopersicum]
gi|115833|sp|P27524.1|CB4A_SOLLC RecName:
Full=Chlorophyll a-b binding protein CP24 10A,
chloroplastic; Short=CAB-10A; Short=LHCP; Flags:
Precursor gi|170394|gb|AAA34143.1| a-binding protein
[Solanum lycopersicum]
Length = 256
Score = 130 bits (328), Expect = 1e-28
Identities = 61/78 (78%), Positives = 70/78 (89%)
Frame = -1
Query: 235 STTSAALVNGLGSAFLTGGKKSQALLSAPIAARGGGAVAPKRLIVVAAAAKKSWIPAVKG 56
+TTSAA++NGL S+FLTGG KSQALL+AP+AAR GGA PKR V+AAAAKKSWIPAV+G
Sbjct: 2 ATTSAAVLNGLSSSFLTGGNKSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVRG 61
Query: 55 GGNFIDPEWLDGSLPGDY 2
GGN +DPEWLDGSLPGDY
Sbjct: 62 GGNLVDPEWLDGSLPGDY 79
>gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotiana tabacum]
Length = 257
Score = 125 bits (315), Expect = 4e-27
Identities = 62/79 (78%), Positives = 68/79 (86%), Gaps = 1/79 (1%)
Frame = -1
Query: 235 STTSAALVNGLGSAFLTGGKKSQALLSAPIAARGGGAVAPKRLIVVAAAA-KKSWIPAVK 59
+TTSAA++NGL S+FLTGGK SQALL AP+AAR GG PKR IV AAAA KKSWIPAVK
Sbjct: 2 ATTSAAVLNGLSSSFLTGGKNSQALLGAPVAARIGGLATPKRCIVAAAAAPKKSWIPAVK 61
Query: 58 GGGNFIDPEWLDGSLPGDY 2
GGGN +DPEWLDGSLPGDY
Sbjct: 62 GGGNLLDPEWLDGSLPGDY 80
>ref|XP_004300703.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 257
Score = 125 bits (313), Expect = 8e-27
Identities = 65/81 (80%), Positives = 69/81 (85%), Gaps = 1/81 (1%)
Frame = -1
Query: 241 MASTTSAALVNGLGSAFLTGGKKSQALLSAPIAAR-GGGAVAPKRLIVVAAAAKKSWIPA 65
MA+TT A L NGL S FL GGK+SQ+LLSA AAR GG VAPKR +VVAAAAKKSWIPA
Sbjct: 1 MAATTGAML-NGLNSTFLCGGKRSQSLLSAGAAARVGGSVVAPKRFVVVAAAAKKSWIPA 59
Query: 64 VKGGGNFIDPEWLDGSLPGDY 2
VKGGGNFIDPEWLDGSLPGDY
Sbjct: 60 VKGGGNFIDPEWLDGSLPGDY 80
>emb|CBI20065.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 122 bits (306), Expect = 5e-26
Identities = 59/79 (74%), Positives = 69/79 (87%), Gaps = 1/79 (1%)
Frame = -1
Query: 235 STTSAALVNGLGSAFLTGGKKSQALLSAPIAARGGGAV-APKRLIVVAAAAKKSWIPAVK 59
+ TSAA++NGLGS FLTGGK+SQ+LLSA +AA+ G AV AP+RLIVVAAA KKSW+P VK
Sbjct: 2 AATSAAVLNGLGSPFLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAAAPKKSWLPGVK 61
Query: 58 GGGNFIDPEWLDGSLPGDY 2
GGN +DPEWLDGSLPGDY
Sbjct: 62 AGGNLVDPEWLDGSLPGDY 80
>ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
[Vitis vinifera] gi|147804704|emb|CAN71620.1|
hypothetical protein VITISV_015544 [Vitis vinifera]
Length = 257
Score = 122 bits (306), Expect = 5e-26
Identities = 59/79 (74%), Positives = 69/79 (87%), Gaps = 1/79 (1%)
Frame = -1
Query: 235 STTSAALVNGLGSAFLTGGKKSQALLSAPIAARGGGAV-APKRLIVVAAAAKKSWIPAVK 59
+ TSAA++NGLGS FLTGGK+SQ+LLSA +AA+ G AV AP+RLIVVAAA KKSW+P VK
Sbjct: 2 AATSAAVLNGLGSPFLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAAAPKKSWLPGVK 61
Query: 58 GGGNFIDPEWLDGSLPGDY 2
GGN +DPEWLDGSLPGDY
Sbjct: 62 AGGNLVDPEWLDGSLPGDY 80
>gb|ESW31081.1| hypothetical protein PHAVU_002G207500g [Phaseolus vulgaris]
Length = 258
Score = 118 bits (296), Expect = 7e-25
Identities = 61/81 (75%), Positives = 67/81 (82%), Gaps = 1/81 (1%)
Frame = -1
Query: 241 MASTTSAALVNGLGSAFLTGGKKSQALLSAPIAARGGGAVAPKRLIV-VAAAAKKSWIPA 65
MA TS A++N GS FL GGK+SQALL+A I A+ G AV PKRLIV VAAA KKSWIP+
Sbjct: 1 MAVATSGAVLNRFGSNFLCGGKRSQALLAAGIGAKVGAAVNPKRLIVAVAAAPKKSWIPS 60
Query: 64 VKGGGNFIDPEWLDGSLPGDY 2
VKGGGNFIDPEWLDGSLPGDY
Sbjct: 61 VKGGGNFIDPEWLDGSLPGDY 81
>ref|XP_003531041.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like isoform 1 [Glycine max]
Length = 258
Score = 118 bits (295), Expect = 9e-25
Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 1/81 (1%)
Frame = -1
Query: 241 MASTTSAALVNGLGSAFLTGGKKSQALLSAPIAARGGGAVAPKRLIV-VAAAAKKSWIPA 65
MA+ TS+A++NG GS FL GGK+S ALL+A I + G +V+PKR+IV VAAA KKSWIPA
Sbjct: 1 MAAATSSAVLNGFGSHFLCGGKRSHALLAASIGGKVGASVSPKRVIVAVAAAPKKSWIPA 60
Query: 64 VKGGGNFIDPEWLDGSLPGDY 2
VKGGG+FIDPEWLDGSLPGDY
Sbjct: 61 VKGGGSFIDPEWLDGSLPGDY 81
>gb|ACU23773.1| unknown [Glycine max]
Length = 258
Score = 118 bits (295), Expect = 9e-25
Identities = 58/81 (71%), Positives = 69/81 (85%), Gaps = 1/81 (1%)
Frame = -1
Query: 241 MASTTSAALVNGLGSAFLTGGKKSQALLSAPIAARGGGAVAPKRLIV-VAAAAKKSWIPA 65
MA+ TS+A++NG GS FL GGK+S ALL+A I + G +V+PKR+IV VAAA KKSWIPA
Sbjct: 1 MAAATSSAVLNGFGSHFLCGGKRSHALLAASIGGKVGASVSPKRVIVAVAAAPKKSWIPA 60
Query: 64 VKGGGNFIDPEWLDGSLPGDY 2
VKGGG+FIDPEWLDGSLPGDY
Sbjct: 61 VKGGGSFIDPEWLDGSLPGDY 81
>gb|AFK41475.1| unknown [Lotus japonicus]
Length = 260
Score = 116 bits (291), Expect = 3e-24
Identities = 56/81 (69%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -1
Query: 238 ASTTSAALVNGLGSAFLTGGKKSQALLSAPIAARGGGAVAPKRLIVVAAAA--KKSWIPA 65
A+ TS A++NGLGS+FL GG +SQ LL++ A+ G AV+PKRLIV AAAA KKSWIPA
Sbjct: 3 AAATSGAVLNGLGSSFLCGGNRSQTLLASAAGAKAGAAVSPKRLIVAAAAAAPKKSWIPA 62
Query: 64 VKGGGNFIDPEWLDGSLPGDY 2
VKGGGN +DPEWLDGSLPGD+
Sbjct: 63 VKGGGNLVDPEWLDGSLPGDF 83
>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
Length = 258
Score = 115 bits (287), Expect = 8e-24
Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
Frame = -1
Query: 241 MASTTSAALVNGLGSAFLTGGKKSQALLSAPIAARGGGAVAPKRLIVVAAAA-KKSWIPA 65
MA+ TS A++NGLGS+FL+GG +SQ LL+ I + G AV+P+RLIVVAAAA KKSWIP
Sbjct: 1 MAAATSGAVLNGLGSSFLSGGSRSQTLLATSIGGKVGVAVSPRRLIVVAAAAPKKSWIPG 60
Query: 64 VKGGGNFIDPEWLDGSLPGDY 2
V+GGGN +DPEWLDGSLPGD+
Sbjct: 61 VRGGGNLVDPEWLDGSLPGDF 81
>gb|AGV54678.1| chlorophyll A/B binding protein CP24 10A chloroplastic [Phaseolus
vulgaris] gi|561021646|gb|ESW20417.1| hypothetical
protein PHAVU_006G207300g [Phaseolus vulgaris]
Length = 258
Score = 111 bits (278), Expect = 9e-23
Identities = 53/81 (65%), Positives = 67/81 (82%), Gaps = 1/81 (1%)
Frame = -1
Query: 241 MASTTSAALVNGLGSAFLTGGKKSQALLSAPIAARGGGAVAPKRLIVVAAAA-KKSWIPA 65
MA+ TS A++NGLGS+FL+GG +SQ LL+ I + G AV+P+RLIVVAAAA KKSW+P
Sbjct: 1 MAAATSGAVLNGLGSSFLSGGSRSQTLLATAIGGKLGVAVSPRRLIVVAAAAPKKSWLPG 60
Query: 64 VKGGGNFIDPEWLDGSLPGDY 2
V+ GGN +DPEWLDGSLPGD+
Sbjct: 61 VRAGGNLVDPEWLDGSLPGDF 81
>ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
[Glycine max]
Length = 261
Score = 111 bits (278), Expect = 9e-23
Identities = 55/84 (65%), Positives = 68/84 (80%), Gaps = 4/84 (4%)
Frame = -1
Query: 241 MASTTSAALVNGLGSAFLTGGKKSQALLSAPIAARGGGA---VAPKRLIVVAAAA-KKSW 74
MA+ TS A++NGLGS+FL+GG +SQ LL+ I + G A V+P+RLIVVAAAA KKSW
Sbjct: 1 MAAATSGAVLNGLGSSFLSGGNRSQTLLATAIGGKVGAAAVTVSPRRLIVVAAAAPKKSW 60
Query: 73 IPAVKGGGNFIDPEWLDGSLPGDY 2
+P V+GGGN +DPEWLDGSLPGDY
Sbjct: 61 LPGVRGGGNLVDPEWLDGSLPGDY 84
>ref|NP_001236415.1| uncharacterized protein LOC100527463 [Glycine max]
gi|255632410|gb|ACU16555.1| unknown [Glycine max]
Length = 259
Score = 111 bits (278), Expect = 9e-23
Identities = 55/83 (66%), Positives = 67/83 (80%), Gaps = 3/83 (3%)
Frame = -1
Query: 241 MASTTSAALVNGLGSAFLTGGKKSQALLSAPIAARGGGAVA--PKRLIVVAAAA-KKSWI 71
MA+ TS A++NGLGS+FL+GG +SQ LL+ I + G AV P+RLIVVAAAA KKSW+
Sbjct: 1 MAAATSGAVLNGLGSSFLSGGNRSQTLLATAIGGKVGAAVTVNPRRLIVVAAAAPKKSWL 60
Query: 70 PAVKGGGNFIDPEWLDGSLPGDY 2
P V+GGGN +DPEWLDGSLPGDY
Sbjct: 61 PGVRGGGNLVDPEWLDGSLPGDY 83
>gb|ACU15016.1| unknown [Glycine max]
Length = 247
Score = 111 bits (278), Expect = 9e-23
Identities = 55/84 (65%), Positives = 68/84 (80%), Gaps = 4/84 (4%)
Frame = -1
Query: 241 MASTTSAALVNGLGSAFLTGGKKSQALLSAPIAARGGGA---VAPKRLIVVAAAA-KKSW 74
MA+ TS A++NGLGS+FL+GG +SQ LL+ I + G A V+P+RLIVVAAAA KKSW
Sbjct: 1 MAAATSGAVLNGLGSSFLSGGNRSQTLLATAIGGKVGAAAVTVSPRRLIVVAAAAPKKSW 60
Query: 73 IPAVKGGGNFIDPEWLDGSLPGDY 2
+P V+GGGN +DPEWLDGSLPGDY
Sbjct: 61 LPGVRGGGNLVDPEWLDGSLPGDY 84
>ref|XP_004485563.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Cicer arietinum]
Length = 260
Score = 110 bits (276), Expect = 1e-22
Identities = 56/83 (67%), Positives = 66/83 (79%), Gaps = 3/83 (3%)
Frame = -1
Query: 241 MASTTSAALVNGLGSAFLTGGKKSQALLSAPIAAR--GGGAVAPKRLIVVAAAA-KKSWI 71
MA+ TS A++NGLGS+FL GGK+SQ LL A G AV+P+RL+V AAAA KKSWI
Sbjct: 1 MAAATSGAVLNGLGSSFLCGGKRSQTLLLATAIGGKVGAAAVSPRRLVVAAAAAPKKSWI 60
Query: 70 PAVKGGGNFIDPEWLDGSLPGDY 2
P V+GGGNFIDPEWLDGSLPGD+
Sbjct: 61 PGVRGGGNFIDPEWLDGSLPGDF 83
>gb|EMJ24688.1| hypothetical protein PRUPE_ppa010195mg [Prunus persica]
Length = 259
Score = 110 bits (274), Expect = 3e-22
Identities = 61/83 (73%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
Frame = -1
Query: 241 MASTTSAALVNGLGSAFLTGGKKSQALLSAPIAAR--GGGAVAPKRLIVVAAAA-KKSWI 71
MA+TT A L NGL S FL GGK+SQALLSA GGG APKR IVVAAAA KKSWI
Sbjct: 1 MAATTGAVL-NGLNSPFLCGGKRSQALLSAGFGTTRVGGGPAAPKRFIVVAAAAPKKSWI 59
Query: 70 PAVKGGGNFIDPEWLDGSLPGDY 2
PAVK NFIDPEWLDGSLPGDY
Sbjct: 60 PAVKASNNFIDPEWLDGSLPGDY 82
>ref|XP_006351797.1| PREDICTED: chlorophyll a-b binding protein CP24 10B,
chloroplastic-like [Solanum tuberosum]
Length = 256
Score = 109 bits (273), Expect = 3e-22
Identities = 54/82 (65%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
Frame = -1
Query: 241 MASTTSAALVNGLGSAFLTGGKKSQALLSAPIAARGGGAVAPKRLIVVAAAA--KKSWIP 68
M +T++AA++NGL S+FLTGGKK+QALL AP+ AR PKR IV AAA KKSWIP
Sbjct: 1 MTTTSAAAVLNGLSSSFLTGGKKTQALLGAPVTAR---VATPKRFIVAAAAVAPKKSWIP 57
Query: 67 AVKGGGNFIDPEWLDGSLPGDY 2
VK GGN +DPEWLDGSLPGD+
Sbjct: 58 GVKAGGNLVDPEWLDGSLPGDF 79
>ref|XP_002533515.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223526625|gb|EEF28871.1| chlorophyll A/B binding
protein, putative [Ricinus communis]
Length = 256
Score = 107 bits (266), Expect = 2e-21
Identities = 54/80 (67%), Positives = 63/80 (78%)
Frame = -1
Query: 241 MASTTSAALVNGLGSAFLTGGKKSQALLSAPIAARGGGAVAPKRLIVVAAAAKKSWIPAV 62
MA+ TS A++NGLGS+FL G K+S ALLSA I A + A + +V+AA KKSWIPAV
Sbjct: 1 MAAATSGAVLNGLGSSFLRGPKRSHALLSA-IGANRTASGASTKFVVMAAQPKKSWIPAV 59
Query: 61 KGGGNFIDPEWLDGSLPGDY 2
KGGGNFIDPEWLDGSLPGDY
Sbjct: 60 KGGGNFIDPEWLDGSLPGDY 79
>ref|XP_004230586.1| PREDICTED: chlorophyll a-b binding protein CP24 10B,
chloroplastic-like isoform 1 [Solanum lycopersicum]
gi|460369474|ref|XP_004230587.1| PREDICTED: chlorophyll
a-b binding protein CP24 10B, chloroplastic-like isoform
2 [Solanum lycopersicum]
gi|115834|sp|P27525.1|CB4B_SOLLC RecName:
Full=Chlorophyll a-b binding protein CP24 10B,
chloroplastic; Short=CAB-10B; Short=LHCP; Flags:
Precursor gi|170400|gb|AAA34146.1| chlorophyll b-binding
protein [Solanum lycopersicum]
Length = 256
Score = 105 bits (263), Expect = 5e-21
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Frame = -1
Query: 241 MASTTSAALVNGLGSAFLTGGKKSQALLSAPIAARGGGAVAPKRLIVVAAAA--KKSWIP 68
M +T++ A++NGL S+FLTGGKK+QALL A + AR PKR +V AAA KKSWIP
Sbjct: 1 MTTTSATAVLNGLSSSFLTGGKKTQALLGAHVTAR---VTTPKRFVVAAAAVAPKKSWIP 57
Query: 67 AVKGGGNFIDPEWLDGSLPGDY 2
AVK GGN +DPEWLDGSLPGD+
Sbjct: 58 AVKSGGNLVDPEWLDGSLPGDF 79