BLASTX nr result
ID: Rehmannia22_contig00002228
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00002228
(1726 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN66743.1| hypothetical protein VITISV_043469 [Vitis vinifera] 53 7e-11
ref|XP_006432011.1| hypothetical protein CICLE_v10003098mg [Citr... 74 3e-10
gb|EOY27458.1| Leucine-rich repeat transmembrane protein kinase ... 48 4e-10
emb|CAN79451.1| hypothetical protein VITISV_001677 [Vitis vinifera] 72 1e-09
gb|EOY18934.1| Uncharacterized protein TCM_043452 [Theobroma cacao] 56 1e-09
gb|EOY05822.1| Uncharacterized protein TCM_020722 [Theobroma cacao] 50 3e-09
gb|EOY01950.1| Uncharacterized protein TCM_011728 [Theobroma cacao] 53 3e-09
gb|EOY07366.1| Adenine nucleotide alpha hydrolases-like superfam... 50 8e-09
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 41 6e-08
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 45 6e-08
emb|CAN79540.1| hypothetical protein VITISV_016973 [Vitis vinifera] 45 8e-08
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera] 41 2e-07
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 63 3e-07
gb|EOX97575.1| Uncharacterized protein TCM_006559 [Theobroma cacao] 41 4e-07
gb|EOY10968.1| Disease resistance family protein / LRR family pr... 44 8e-07
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 44 1e-06
gb|EMJ28363.1| hypothetical protein PRUPE_ppa025366mg [Prunus pe... 61 1e-06
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 41 1e-06
gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subc... 44 2e-06
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 40 2e-06
>emb|CAN66743.1| hypothetical protein VITISV_043469 [Vitis vinifera]
Length = 798
Score = 52.8 bits (125), Expect(2) = 7e-11
Identities = 26/49 (53%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Frame = -2
Query: 1251 LDQLGKVGVKVEEEDKALLLLTSIPDS--YDSLVTTLLYGKDTLDLEHI 1111
+ L ++ VK E++DKAL+ L S+P S Y++LVTTL++GK+TLDLE I
Sbjct: 42 ISDLKQIDVKFEDKDKALMXLNSLPVSSTYENLVTTLMWGKETLDLEEI 90
Score = 42.7 bits (99), Expect(2) = 7e-11
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = -3
Query: 1070 ANQEEGHGYALVA-REMNR*REGFWWWICNQQVRFKDQG-KGVVCYRYHEKDHVKRNCPR 897
AN E G L+A R R R F + N + RF+ + K + CY+ +K H+KR+CP
Sbjct: 103 ANDESSQGEGLMAKRNQERERNKFRSELSNNKSRFESKKIKDIQCYKCGKKGHMKRDCPE 162
Query: 896 RKK 888
+KK
Sbjct: 163 KKK 165
>ref|XP_006432011.1| hypothetical protein CICLE_v10003098mg [Citrus clementina]
gi|557534133|gb|ESR45251.1| hypothetical protein
CICLE_v10003098mg [Citrus clementina]
Length = 182
Score = 73.6 bits (179), Expect = 3e-10
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 46/142 (32%)
Frame = -2
Query: 1398 FKVQQFDGKGNFTPWQ*RVKDLLVQRGLAMALKGKEENLTDMKGAQ-----WANLDQLGK 1234
F++++FDG+ NF WQ +VKD+L+Q GL ALKGK ++ + W L++L +
Sbjct: 12 FEIEKFDGRINFGLWQVQVKDVLIQSGLHKALKGKPSPASNSGSGKTTKELWEKLEKLYR 71
Query: 1233 -----------------------------------------VGVKVEEEDKALLLLTSIP 1177
+GVK+E+ DKAL LL S+P
Sbjct: 72 TKSISNRLYLKERFHTLRMTEGTKIFDHLSVLNGIVLELEAIGVKIEDGDKALRLLWSLP 131
Query: 1176 DSYDSLVTTLLYGKDTLDLEHI 1111
SY L+ TL+YGK+T++LE +
Sbjct: 132 TSYKHLLPTLMYGKETVNLEEV 153
>gb|EOY27458.1| Leucine-rich repeat transmembrane protein kinase [Theobroma cacao]
Length = 1179
Score = 48.1 bits (113), Expect(2) = 4e-10
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = -1
Query: 667 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLIS 572
G+ VVKIKM DGV R+L G+AYVPKMR NLIS
Sbjct: 1075 GLEVVKIKMFDGVVRSLDGMAYVPKMRKNLIS 1106
Score = 44.7 bits (104), Expect(2) = 4e-10
Identities = 29/71 (40%), Positives = 39/71 (54%)
Frame = -2
Query: 855 GDSCGSWRYLTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTC 676
GD C LT+S +D +S W L+S H+ ++D FDLLQ AG L G+ S
Sbjct: 1017 GDDCD---VLTISENMDANSY--WYLNSASATHICYQKDCFDLLQEGVAGNLTLGNKSIV 1071
Query: 675 RIMGLEW*KSK 643
++MGLE K K
Sbjct: 1072 KVMGLEVVKIK 1082
>emb|CAN79451.1| hypothetical protein VITISV_001677 [Vitis vinifera]
Length = 805
Score = 71.6 bits (174), Expect = 1e-09
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 38/133 (28%)
Frame = -2
Query: 1386 QFDGKGNFTPWQ*RVKDLLVQRGLAMALKGKEE---NLTDMKGAQW-------------- 1258
+FDG GNF W RVKDLLVQ+G+ AL K+ N D K +
Sbjct: 8 KFDGYGNFGLWXRRVKDLLVQQGMVKALYKKQPKRMNNMDWKDLEXKXAAIIXLCLADDX 67
Query: 1257 -----------ANLDQLGK--------VGVKVEEEDKALLLLTSIPDS--YDSLVTTLLY 1141
+NL ++GK + +K E+EDKAL+LL +P S Y++LVTTL++
Sbjct: 68 MYHVMDEESLSSNLVEIGKSIISDLKRIDMKFEDEDKALMLLNXLPASSMYENLVTTLMW 127
Query: 1140 GKDTLDLEHI*KH 1102
K+TLDLE I H
Sbjct: 128 RKETLDLEEITNH 140
>gb|EOY18934.1| Uncharacterized protein TCM_043452 [Theobroma cacao]
Length = 166
Score = 55.8 bits (133), Expect(2) = 1e-09
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = -1
Query: 667 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLIS 572
GIGVVKIKM DGV R+LGGVAYVPKMR NLIS
Sbjct: 47 GIGVVKIKMFDGVVRSLGGVAYVPKMRKNLIS 78
Score = 35.4 bits (80), Expect(2) = 1e-09
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -2
Query: 786 WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRIMGL 661
W LDS H+ ++D FDLLQ G L G+ S ++MG+
Sbjct: 7 WYLDSASATHICYQKDCFDLLQEVVVGNLTLGNKSIVKVMGI 48
>gb|EOY05822.1| Uncharacterized protein TCM_020722 [Theobroma cacao]
Length = 218
Score = 50.1 bits (118), Expect(2) = 3e-09
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = -1
Query: 667 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLIS 572
G+ VVKIKM DGV +LGGVAYVPKMR NLIS
Sbjct: 89 GLAVVKIKMFDGVVLSLGGVAYVPKMRKNLIS 120
Score = 40.0 bits (92), Expect(2) = 3e-09
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = -2
Query: 828 LTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRIMGL 661
LT+S +D + W LDS H+ ++D FDLLQ AG L G+ S ++MGL
Sbjct: 37 LTISEDMDANFD--WYLDSASATHICYQKDCFDLLQEGMAGNLTLGNKSIVKVMGL 90
>gb|EOY01950.1| Uncharacterized protein TCM_011728 [Theobroma cacao]
Length = 176
Score = 52.8 bits (125), Expect(2) = 3e-09
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -1
Query: 667 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLIS 572
GI VVKIKM DGV R+LGGVAYVPKMR NLIS
Sbjct: 47 GIRVVKIKMFDGVVRSLGGVAYVPKMRKNLIS 78
Score = 37.4 bits (85), Expect(2) = 3e-09
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = -2
Query: 786 WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRIMGLEW*KSK 643
W LDS H+ ++D FDLLQ AG L G+ S ++MG+ K K
Sbjct: 7 WYLDSASATHICYQKDCFDLLQEGVAGNLTLGNKSIVKVMGIRVVKIK 54
>gb|EOY07366.1| Adenine nucleotide alpha hydrolases-like superfamily protein
[Theobroma cacao]
Length = 434
Score = 49.7 bits (117), Expect(2) = 8e-09
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = -1
Query: 667 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLIS 572
G+ VVKIKM DGV R+LGGVAYVPKM NLIS
Sbjct: 305 GLVVVKIKMFDGVVRSLGGVAYVPKMHKNLIS 336
Score = 38.9 bits (89), Expect(2) = 8e-09
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -2
Query: 855 GDSCGSWRYLTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTC 676
GD+C LT+S +D +S W LD H+ +++ FDLLQ G L G+ S
Sbjct: 247 GDNCD---VLTISENMDANSD--WYLDFASATHICYQKNCFDLLQEGVTGNLTLGNKSIV 301
Query: 675 RIMGL 661
++MGL
Sbjct: 302 KVMGL 306
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 41.2 bits (95), Expect(3) = 6e-08
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = -2
Query: 792 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRIMGL 661
D WILDSGC H+ RD+F Q G+++ G+ + C+ +G+
Sbjct: 223 DEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGI 266
Score = 36.6 bits (83), Expect(3) = 6e-08
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = -1
Query: 667 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLIS 572
GIG +K++ DG R L V YVPK++ NLIS
Sbjct: 265 GIGSIKLRNHDGSTRILRDVRYVPKLKKNLIS 296
Score = 26.9 bits (58), Expect(3) = 6e-08
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = -3
Query: 968 KDQGKGVV---CYRYHEKDHVKRNCPRRKK 888
K +G+ V C HEK H K++CP+ +K
Sbjct: 160 KSKGRAVAKDECAFCHEKGHWKKDCPKLQK 189
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 44.7 bits (104), Expect(2) = 6e-08
Identities = 49/217 (22%), Positives = 80/217 (36%), Gaps = 6/217 (2%)
Frame = -2
Query: 1293 EENLTDMKGAQWANLDQLGKVGVKVEEEDKALLLLTSIPDSYDSLVTTLLYG------KD 1132
+E++ D A + L + VK +EED L+LL S+P SY + T+LY K+
Sbjct: 114 DESVMDHLSAFKEIVADLESMEVKHDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKE 173
Query: 1131 TLDLEHI*KHRCCPINXXXXXXXXXGTWICFGCSGNESVTGGILVVDL*SAGQIQGPGKG 952
D H + + + G T + + + G Q P G
Sbjct: 174 VYDALHAKEKMKKMVPSEGSNSQAESLVVGVGNRRRTQTTNQEIKAQVATVGD-QSPEAG 232
Query: 951 CCMLSLSREGSRQKKLSSEKEG**R*RWRW*CGDSCGSWRYLTVSTRIDTSSRD*WILDS 772
E + ++ EK S L V+ + D WILD+
Sbjct: 233 -----KKEEEGKAAVVTDEK-----------------SDAELLVAYVGCAQTSDQWILDT 270
Query: 771 GCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRIMGL 661
C H+ RD+F + + G + GD + C + G+
Sbjct: 271 ACTYHMCPNRDWFATYETVQGGTVLMGDDTPCEVAGI 307
Score = 40.8 bits (94), Expect(2) = 6e-08
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -1
Query: 667 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWC 566
GIG V+IKM DG RTL V ++P ++ +LIS+C
Sbjct: 306 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISFC 339
>emb|CAN79540.1| hypothetical protein VITISV_016973 [Vitis vinifera]
Length = 699
Score = 45.4 bits (106), Expect(2) = 8e-08
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = -2
Query: 852 DSCGSWRYLTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCR 673
D G +L VS +D WILDSGC H+ RD+F + GI+ G+ +C+
Sbjct: 89 DEYGYGEHLVVSDGDSKPYKD-WILDSGCTFHMCPNRDWFSTNETXSKGIVLMGNNVSCK 147
Query: 672 IMGL 661
I G+
Sbjct: 148 ITGI 151
Score = 39.7 bits (91), Expect(2) = 8e-08
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = -1
Query: 667 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLI 575
GIG V+IKM DG RTLG V ++P ++ NLI
Sbjct: 150 GIGTVRIKMFDGFVRTLGDVXHIPDLKRNLI 180
>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
Length = 894
Score = 40.8 bits (94), Expect(3) = 2e-07
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = -1
Query: 667 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLIS 572
G G VKIK DG++R L + Y+P+++MNLIS
Sbjct: 322 GTGTVKIKHYDGIERVLEDIRYIPELKMNLIS 353
Score = 34.7 bits (78), Expect(3) = 2e-07
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 786 WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRIMG 664
WILDSGC H+ + +F+ + G + G+ C+I+G
Sbjct: 282 WILDSGCSFHMCPIKAWFEDFKEANGGHVLLGNNKHCKILG 322
Score = 27.3 bits (59), Expect(3) = 2e-07
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 986 NQQVRFKDQGKGVVCYRYHEKDHVKRNCP 900
N + R K + K C+ H++ H K++CP
Sbjct: 214 NSKSRSKSKTKKFKCFICHKEGHFKKDCP 242
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 63.2 bits (152), Expect = 3e-07
Identities = 27/47 (57%), Positives = 39/47 (82%)
Frame = -2
Query: 1251 LDQLGKVGVKVEEEDKALLLLTSIPDSYDSLVTTLLYGKDTLDLEHI 1111
+ QL +GVK+EEEDKA+LLL S+P SYD+L TT+L+GK T++L+ +
Sbjct: 129 ITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDV 175
>gb|EOX97575.1| Uncharacterized protein TCM_006559 [Theobroma cacao]
Length = 266
Score = 41.2 bits (95), Expect(3) = 4e-07
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = -1
Query: 667 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLIS 572
G+ VVKIKM D V R LGG+AYV +MR NLIS
Sbjct: 138 GLRVVKIKMFDRVVRFLGGMAYVLEMRKNLIS 169
Score = 35.0 bits (79), Expect(3) = 4e-07
Identities = 26/71 (36%), Positives = 35/71 (49%)
Frame = -2
Query: 855 GDSCGSWRYLTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTC 676
GD C LT+S +D +S LD H+Y ++D FDL Q A L G+ S
Sbjct: 80 GDDCD---VLTISKNMDANSD--LYLDFASATHIYYQKDCFDLPQEGVAENLTLGNKSIM 134
Query: 675 RIMGLEW*KSK 643
++MGL K K
Sbjct: 135 KVMGLRVVKIK 145
Score = 25.8 bits (55), Expect(3) = 4e-07
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -3
Query: 968 KDQGKGVVCYRYHEKDHVKRNCPRRK 891
K + V C++ H+KR+CP ++
Sbjct: 39 KSRSNNVQCFQCKRYGHIKRDCPTKE 64
>gb|EOY10968.1| Disease resistance family protein / LRR family protein, putative
[Theobroma cacao]
Length = 1163
Score = 43.9 bits (102), Expect(2) = 8e-07
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -1
Query: 667 GIGVVKIKMGDGVDRTLGGVAYVPKMR 587
G+GVVKIKM DGV +LGGVAYVPKM+
Sbjct: 47 GLGVVKIKMFDGVVCSLGGVAYVPKMQ 73
Score = 37.7 bits (86), Expect(2) = 8e-07
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = -2
Query: 810 IDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRIMGL 661
+DT+S W LDS H+ ++D FDLLQ G L G+ S ++MGL
Sbjct: 1 MDTNSN--WCLDSASTTHICYQKDCFDLLQEWVVGNLTLGNKSIVKVMGL 48
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 43.5 bits (101), Expect(3) = 1e-06
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 786 WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRIMGL 661
W+LDSGC H+ RRD+F Q G L G+ +C ++G+
Sbjct: 178 WVLDSGCTYHMCPRRDWFSSYQEVNGGKLLLGNNMSCNVVGI 219
Score = 34.7 bits (78), Expect(3) = 1e-06
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -1
Query: 667 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLIS 572
GIG + I M DG RTL V +VP ++ NLIS
Sbjct: 218 GIGTMAINMHDGKTRTLKEVRHVPDLKRNLIS 249
Score = 22.3 bits (46), Expect(3) = 1e-06
Identities = 10/40 (25%), Positives = 18/40 (45%)
Frame = -3
Query: 968 KDQGKGVVCYRYHEKDHVKRNCPRRKKXXXXXXXXXDAVI 849
K + V CY ++ ++R CP R++ A+I
Sbjct: 118 KKDYRNVKCYHCNKIGQIRRICPDRQQEEKTQAQGSAAII 157
>gb|EMJ28363.1| hypothetical protein PRUPE_ppa025366mg [Prunus persica]
Length = 191
Score = 61.2 bits (147), Expect = 1e-06
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 30/132 (22%)
Frame = -2
Query: 1416 VAVTNPFKVQQFDGKGNFTPWQ*RVKDLLVQRGLAMALKGKEENLT-DMKGAQWANLD-- 1246
+++ + FKV+QFDG +FT WQ VK ++ + ++ K + D W L+
Sbjct: 3 MSIPSQFKVEQFDGNMSFTIWQRIVKGKDAKQERMVVIREKTWSRDEDSARTLWEKLERL 62
Query: 1245 ---------------------------QLGKVGVKVEEEDKALLLLTSIPDSYDSLVTTL 1147
QL +V VK++EE+K LLLTS+P+ YD ++TT+
Sbjct: 63 YLNKSLNTKLNLKQDLYKLKMNEGLLNQLARVDVKIKEENKTFLLLTSLPNLYDRVLTTM 122
Query: 1146 LYGKDTLDLEHI 1111
Y K TL +E +
Sbjct: 123 FYDKYTLKMEDV 134
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 41.2 bits (95), Expect(2) = 1e-06
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 8/202 (3%)
Frame = -2
Query: 1242 LGKVGVKVEEEDKALLLLTSIPDSYDSLVTTLLYGKDTLDLEHI*KH--RCCPINXXXXX 1069
L KVG K+++ED A++LL S+P + TT+++ K+ + L + ++ +
Sbjct: 106 LEKVGAKMDDEDTAVMLLHSLPPLFKHFKTTMIF-KELITLSKVCENPKSYIRLEREEDS 164
Query: 1068 XXXXGTWICFGCSGNESVTGGILVVDL*SAGQIQGPGK--GCCMLSLSREGSRQKKLSSE 895
G ++ G GG S + +G GK GC + R K E
Sbjct: 165 SQARGLYVRGKERGRSRNRGGGFQGRGMSKSKGKGKGKKDGCFIYGSPDHWKRNCKQWKE 224
Query: 894 KE----G**R*RWRW*CGDSCGSWRYLTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDL 727
K+ G G + L +ST W LD+ C H + RD+FD
Sbjct: 225 KKAQMSGESSQLANVVIGYNDEDGELLAISTSSGAPRH--WTLDTACTFHTCAHRDWFDT 282
Query: 726 LQLQRAGILFSGDGSTCRIMGL 661
+ + G+ S RIMG+
Sbjct: 283 YKEGNTRSVLMGNDSPSRIMGI 304
Score = 39.7 bits (91), Expect(2) = 1e-06
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -1
Query: 667 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLIS 572
GIG+VKI+M DG+ R LG V + P + NLIS
Sbjct: 303 GIGMVKIRMHDGIVRALGNVRHTPGLNRNLIS 334
>gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 415
Score = 43.9 bits (102), Expect(2) = 2e-06
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = -2
Query: 843 GSWRYLTVSTRIDTSSRD*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRIMG 664
GS LTVS D S + W+LDS HV S+R++F + G+++ GDG++ R++G
Sbjct: 260 GSHEILTVS---DEMSGEAWMLDSASSYHVTSKREWFSSYKSGDFGVVYLGDGTSYRVVG 316
Query: 663 L 661
+
Sbjct: 317 V 317
Score = 36.6 bits (83), Expect(2) = 2e-06
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 968 KDQGKGVVCYRYHEKDHVKRNCPRRKK 888
K + KG CY+ HE H++RNCP KK
Sbjct: 216 KSKEKGARCYKCHEFGHIRRNCPLLKK 242
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 40.4 bits (93), Expect(2) = 2e-06
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -2
Query: 792 D*WILDSGCIMHVYSRRDYFDLLQLQRAGILFSGDGSTCRIMGL 661
D WILD+ C H+ RD+F ++ + G + GD + C + G+
Sbjct: 283 DQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGI 326
Score = 39.7 bits (91), Expect(2) = 2e-06
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = -1
Query: 667 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWC 566
GIG V+IKM DG RTL V ++P ++ +LIS C
Sbjct: 325 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLC 358