BLASTX nr result
ID: Rehmannia22_contig00001828
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00001828
(2083 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAF64710.1| putative transposase [Ipomoea tricolor] 59 3e-14
gb|ABD32456.2| Nucleic acid-binding, OB-fold [Medicago truncatula] 46 9e-11
ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding sub... 38 1e-08
ref|XP_003609678.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 36 1e-07
ref|XP_003614174.1| hypothetical protein MTR_5g045850 [Medicago ... 45 3e-07
ref|XP_003598569.1| hypothetical protein MTR_3g015660 [Medicago ... 42 4e-07
ref|XP_004503835.1| PREDICTED: uncharacterized protein LOC101511... 41 6e-07
ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding sub... 36 4e-06
>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
Length = 517
Score = 58.5 bits (140), Expect(3) = 3e-14
Identities = 31/90 (34%), Positives = 50/90 (55%)
Frame = -3
Query: 1973 QGERIHATIRKMHMEQYKKMLNEGRIYAIRDFLVTNQMDKYKTCVTKYKIMFHGKTHMFE 1794
+G +H I K +E+Y ML G++Y+IR+FLV + YKT KY + F+ KT + E
Sbjct: 50 EGTVLHVNIPKEFVEKYSAMLKIGQVYSIRNFLVISNFYTYKTSPHKYMLKFYYKTVVRE 109
Query: 1793 LFDKNFPKFMYVFKDFTELLDVTKVDDSLL 1704
L D FP M+ + ++L +++ L
Sbjct: 110 LKDIVFPSHMFRLQPLSQLKQKIDINEKEL 139
Score = 43.1 bits (100), Expect(3) = 3e-14
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = -3
Query: 1424 RVTCTLWEDYVDTILPYLEEHSREPFVIIIQMCRAKVYRGNFEFIKIIEHFSV 1266
++ CT+W+D+V + P+ + ++P +I++Q CR KV + IK+ F V
Sbjct: 176 QIKCTVWDDHVSKLEPFYQSTKQDPVIILLQFCRVKVDLSTGD-IKVCSSFDV 227
Score = 25.0 bits (53), Expect(3) = 3e-14
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 1618 DIIGRVVMMQSAETKQVEGRATRFM 1544
D+IG VV + + + K + G+ATR +
Sbjct: 141 DLIGMVVEINTPQDKVIAGKATRLI 165
>gb|ABD32456.2| Nucleic acid-binding, OB-fold [Medicago truncatula]
Length = 327
Score = 46.2 bits (108), Expect(4) = 9e-11
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = -3
Query: 1997 IYVNLNIL--QGERIHATIRKMHMEQYKKMLNEGRIYAIRDFLVTNQMDKYKTCVTKYKI 1824
I++N+ ++ +G RIHAT RK + +++ M+ EG Y + + +V YK K+K+
Sbjct: 41 IFMNMLLVDEKGGRIHATARKDLVAKFRSMVQEGGTYQLENAIVDFNESPYKVTSHKHKL 100
Query: 1823 MFHGKTHMFELFDKNFPKFMYVFKDFTELLDVT 1725
+ ++ P ++ FK F E+L T
Sbjct: 101 SMMHNSTFTKVHSLAIPMNVFEFKPFNEILSST 133
Score = 43.5 bits (101), Expect(4) = 9e-11
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = -3
Query: 1430 NNRVTCTLWEDYVDTILPYLEEHSRE-PFVIIIQMCRAKVYRG 1305
NNR+ C+LW ++VD I+ + H + P ++I+Q C+ ++Y G
Sbjct: 173 NNRLHCSLWGEHVDKIVTFFGNHDNDTPTILILQFCKTRMYLG 215
Score = 23.5 bits (49), Expect(4) = 9e-11
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 1246 FFKHLQHLGEVKVSNTYHVTKLIVDVEEEAIKEYKRR 1136
F K +LG + V+N ++ TKLI++ + + Y R
Sbjct: 207 FCKTRMYLGVMGVANAFNGTKLILNGDLPDVAVYMTR 243
Score = 20.8 bits (42), Expect(4) = 9e-11
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 1621 TDIIGRVVMMQSAETKQVEGRATR 1550
TD+IG V+ + + +GR +R
Sbjct: 139 TDVIGHVIERGNIRETEKDGRKSR 162
>ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355484558|gb|AES65761.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 549
Score = 38.1 bits (87), Expect(3) = 1e-08
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -1
Query: 757 FWICGTIISFV--GDWWYLSCPHCPKKLKEAGEKLYCFGCDKFPENGNLRYL 608
F + GT+ V DWWY SC C KK+ + +C C+K N RY+
Sbjct: 289 FAVFGTVNVIVDDSDWWYTSCVVCNKKVYPDEKMYFCSKCNKHVLNVTPRYM 340
Score = 35.4 bits (80), Expect(3) = 1e-08
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = -1
Query: 319 NGQDIPDDIASLIDTQAFFKVQVKGDQLKHYDRSLTVLKLTKNPELIKKF 170
+ ++P DI ++++ FKV+ Y++S V ++T +P L++KF
Sbjct: 381 DASEVPKDILAMVEKSYLFKVETNLGSSTMYEKSYRVKRVTADPVLVEKF 430
Score = 34.3 bits (77), Expect(3) = 1e-08
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = -3
Query: 527 RYKLEIQVVDNTGNVPLLLWDRDCEKLIGKPCA 429
RY ++++VVD+T + +L+DRD +L K CA
Sbjct: 338 RYMIKMRVVDHTDSATFVLFDRDAAELFKKTCA 370
>ref|XP_003609678.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355510733|gb|AES91875.1| ATP-dependent DNA helicase
PIF1 [Medicago truncatula]
Length = 893
Score = 36.2 bits (82), Expect(3) = 1e-07
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 757 FWICGTIISFV--GDWWYLSCPHCPKKLKEAGEKLYCFGCDKF 635
F + GT+ V DWWY SC C KK+ + +C C+K+
Sbjct: 265 FAVFGTVNVIVDDSDWWYTSCVVCNKKVYPDEKMYFCSKCNKY 307
Score = 34.7 bits (78), Expect(3) = 1e-07
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = -1
Query: 310 DIPDDIASLIDTQAFFKVQVKGDQLKHYDRSLTVLKLTKNPELIKKF 170
++P DI ++++ FKV+ Y++S V ++T +P L++KF
Sbjct: 347 EVPKDILAMVEKSYLFKVETNLGSSTMYEKSYWVKRVTADPVLVEKF 393
Score = 33.5 bits (75), Expect(3) = 1e-07
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 521 KLEIQVVDNTGNVPLLLWDRDCEKLIGKPCAILRSEHMDV 402
K I+VVD+T + +L+DRD +L K CA + +DV
Sbjct: 306 KYMIKVVDHTDSATFVLFDRDAAELFKKTCADMIESRIDV 345
>ref|XP_003614174.1| hypothetical protein MTR_5g045850 [Medicago truncatula]
gi|355515509|gb|AES97132.1| hypothetical protein
MTR_5g045850 [Medicago truncatula]
Length = 309
Score = 45.4 bits (106), Expect(3) = 3e-07
Identities = 25/91 (27%), Positives = 42/91 (46%)
Frame = -3
Query: 1997 IYVNLNILQGERIHATIRKMHMEQYKKMLNEGRIYAIRDFLVTNQMDKYKTCVTKYKIMF 1818
I++ L G IHAT RK + +++ M+ EG Y + + +V YK K+K+
Sbjct: 27 IWLMKRFLHGGHIHATARKDLVAKFRSMVQEGGTYQLENAIVGFNESPYKVTSHKHKLSM 86
Query: 1817 HGKTHMFELFDKNFPKFMYVFKDFTELLDVT 1725
+ + P ++ FK F E+L T
Sbjct: 87 MHNSTFTNVHSPAIPMNVFYFKPFNEILSST 117
Score = 37.0 bits (84), Expect(3) = 3e-07
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -3
Query: 1430 NNRVTCTLWEDYVDTILPYLEEHSRE-PFVIIIQMC 1326
NNR+ C+LW ++VD I+ + H + P V+I+Q C
Sbjct: 157 NNRLHCSLWGEHVDKIVTFFCNHDNDTPTVLILQFC 192
Score = 20.4 bits (41), Expect(3) = 3e-07
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 1621 TDIIGRVVMMQSAETKQVEGRATR 1550
TD+IG V+ + +GR +R
Sbjct: 123 TDVIGHVIERGDIRETEKDGRKSR 146
>ref|XP_003598569.1| hypothetical protein MTR_3g015660 [Medicago truncatula]
gi|355487617|gb|AES68820.1| hypothetical protein
MTR_3g015660 [Medicago truncatula]
Length = 284
Score = 42.0 bits (97), Expect(4) = 4e-07
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -3
Query: 1430 NNRVTCTLWEDYVDTILPYLEEHSRE-PFVIIIQMCRAKVYRG 1305
NNR+ C+LW ++ D I+ + H + P ++I+Q C+ ++Y G
Sbjct: 172 NNRLHCSLWGEHADKIVTFFGNHDNDTPTILILQFCKTRMYLG 214
Score = 38.5 bits (88), Expect(4) = 4e-07
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = -3
Query: 1997 IYVNLNIL--QGERIHATIRKMHMEQYKKMLNEGRIYAIRDFLVTNQMDKYKTCVTKYKI 1824
I++N+ ++ +G HAT RK + +++ M+ EG Y + + +V YK K+K+
Sbjct: 40 IFMNMLLVDEKGGCFHATARKDLVAKFRSMVQEGGTYQLENAIVGFNESPYKVTSHKHKL 99
Query: 1823 MFHGKTHMFELFDKNFPKFMYVFKDFTELLDVT 1725
+ ++ P ++ FK F +L T
Sbjct: 100 SMMHTSTFTKVHSPAIPMNVFEFKPFNGILSST 132
Score = 20.4 bits (41), Expect(4) = 4e-07
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 1621 TDIIGRVVMMQSAETKQVEGRATR 1550
TD+IG V+ + +GR +R
Sbjct: 138 TDVIGHVIERGDIRETEKDGRKSR 161
Score = 20.4 bits (41), Expect(4) = 4e-07
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 1246 FFKHLQHLGEVKVSNTYHVTKLIVD 1172
F K +LG + V++ ++ TKLI++
Sbjct: 206 FCKTRMYLGVMGVADAFNGTKLILN 230
>ref|XP_004503835.1| PREDICTED: uncharacterized protein LOC101511049 [Cicer arietinum]
Length = 351
Score = 41.2 bits (95), Expect(3) = 6e-07
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = -1
Query: 322 PNGQDIPDDIASLIDTQAFFKVQVKGDQLKHYDRSLTVLKLTKNPELIKKF 170
P +P +I L++ Q FK++ K D ++++S V KL + ++IKKF
Sbjct: 238 PQSDTVPKEIGDLVEKQFLFKIEAKNDVNSNFEKSFRVKKLCGDLDIIKKF 288
Score = 30.8 bits (68), Expect(3) = 6e-07
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 527 RYKLEIQVVDNTGNVPLLLWDRDCEKLIGKPCAILRSE 414
RY+++++VVD+T + +++D D L K C L E
Sbjct: 196 RYRIKVRVVDDTDSATFVIFDHDGISLTNKSCLNLLHE 233
Score = 29.6 bits (65), Expect(3) = 6e-07
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 724 GDWWYLSCPHCPKKLKEAGEKLYCFGCDKF 635
GDWWY +C C K + ++ +C C K+
Sbjct: 161 GDWWYGACV-CNKGVVIESKRFFCSKCKKY 189
>ref|XP_003637946.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|358347930|ref|XP_003638003.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355503881|gb|AES85084.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355503938|gb|AES85141.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 566
Score = 35.8 bits (81), Expect(3) = 4e-06
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 319 NGQDIPDDIASLIDTQAFFKVQVKGDQLKHYDRSLTVLKLTKNPELIKKFA 167
N D P D+ S + + FKV+V L H R+ V + T ++I +FA
Sbjct: 378 NSSDYPSDLDSFVGKRMLFKVEVSDGNLLHNWRNYAVKRTTAEEDVINQFA 428
Score = 33.5 bits (75), Expect(3) = 4e-06
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -3
Query: 527 RYKLEIQVVDNTGNVPLLLWDRDCEKLIGK 438
R+KL +QV+DNTG+ +L+DR+ + +
Sbjct: 337 RFKLHVQVMDNTGSTSFILFDRNVSSYVNR 366
Score = 29.3 bits (64), Expect(3) = 4e-06
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 751 ICGTIISFVGDWWYLSCPHCPKKLKEAGEKLYCFGCD 641
ICG + W+Y +C C +++ +LYC C+
Sbjct: 295 ICGIESEY--SWYYQACTKCAGRVRTVAGRLYCGKCN 329