BLASTX nr result
ID: Rehmannia22_contig00001655
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00001655
(402 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006347313.1| PREDICTED: ribosome-binding factor PSRP1, ch... 89 8e-16
gb|ACV83721.1| chloroplast ribosomal protein [Solanum tuberosum] 88 1e-15
ref|NP_001233834.1| chloroplast-specific ribosomal protein [Sola... 88 1e-15
gb|EPS59457.1| hypothetical protein M569_15350, partial [Genlise... 72 8e-11
gb|EOY23705.1| Plastid-specific 30S ribosomal protein 1 [Theobro... 71 2e-10
ref|XP_006493202.1| PREDICTED: ribosome-binding factor PSRP1, ch... 69 5e-10
ref|XP_006441240.1| hypothetical protein CICLE_v10021260mg [Citr... 69 5e-10
ref|XP_006376595.1| hypothetical protein POPTR_0012s00590g [Popu... 68 1e-09
ref|XP_006376594.1| hypothetical protein POPTR_0012s00590g [Popu... 68 1e-09
ref|XP_002317839.1| 30S ribosomal family protein [Populus tricho... 68 1e-09
ref|XP_006394705.1| hypothetical protein EUTSA_v10004495mg [Eutr... 67 2e-09
gb|EXB78385.1| 30S ribosomal protein 1 [Morus notabilis] 67 3e-09
ref|XP_006288304.1| hypothetical protein CARUB_v10001549mg [Caps... 66 4e-09
ref|XP_004307913.1| PREDICTED: ribosome-binding factor PSRP1, ch... 66 4e-09
ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, ch... 65 7e-09
ref|XP_002872116.1| hypothetical protein ARALYDRAFT_489312 [Arab... 65 9e-09
ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloropl... 65 9e-09
ref|NP_001241953.1| uncharacterized protein LOC100784915 [Glycin... 64 2e-08
ref|XP_003526761.1| PREDICTED: ribosome-binding factor PSRP1, ch... 64 2e-08
dbj|BAB11201.1| unnamed protein product [Arabidopsis thaliana] 64 2e-08
>ref|XP_006347313.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Solanum
tuberosum]
Length = 312
Score = 88.6 bits (218), Expect = 8e-16
Identities = 48/81 (59%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
Frame = -3
Query: 232 NCSNNPGP---FSFSSQKSSFLGLGFKAHEMVVPKRG-IRRSAGVKMSWDGSLSSVKLIL 65
+C P + SS S FL FK +E+ VP R ++ S GV+MSWDG LSSVKLIL
Sbjct: 30 SCPTTASPAFSLTLSSSNSGFLNSAFKKNEINVPVRNRVKNSFGVRMSWDGPLSSVKLIL 89
Query: 64 QGKNLELTPTVKSYVEEKLGK 2
QGKNLELTP VK YVEEKLGK
Sbjct: 90 QGKNLELTPAVKDYVEEKLGK 110
>gb|ACV83721.1| chloroplast ribosomal protein [Solanum tuberosum]
Length = 280
Score = 88.2 bits (217), Expect = 1e-15
Identities = 48/81 (59%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
Frame = -3
Query: 232 NCSNNPGP---FSFSSQKSSFLGLGFKAHEMVVPKRG-IRRSAGVKMSWDGSLSSVKLIL 65
+C P + SS S FL FK +E+ VP R ++ S GV+MSWDG LSSVKLIL
Sbjct: 2 SCPTTASPAFSLTLSSSNSGFLNSAFKKNEINVPVRNRVKXSFGVRMSWDGPLSSVKLIL 61
Query: 64 QGKNLELTPTVKSYVEEKLGK 2
QGKNLELTP VK YVEEKLGK
Sbjct: 62 QGKNLELTPAVKDYVEEKLGK 82
>ref|NP_001233834.1| chloroplast-specific ribosomal protein [Solanum lycopersicum]
gi|51457950|gb|AAU03364.1| chloroplast-specific
ribosomal protein [Solanum lycopersicum]
Length = 311
Score = 87.8 bits (216), Expect = 1e-15
Identities = 56/118 (47%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
Frame = -3
Query: 343 MATLFAAPTMQKSFNYQLHVXXXXXXXXXXXXXXSKPNCSNNPGP---FSFSSQKSSFLG 173
MATL +P++ +F + LH +C P + SS S FL
Sbjct: 1 MATLSLSPSVGTTF-HSLH-------SYPNGSSSYSSSCPATASPALSLTLSSTNSRFLN 52
Query: 172 LGFKAHEMVVPKRG-IRRSAGVKMSWDGSLSSVKLILQGKNLELTPTVKSYVEEKLGK 2
FK +E+ VP R + +S GV+MSWDG LSSVKLILQGKNLELTP VK YVEEKLGK
Sbjct: 53 SAFKMNEINVPVRNRVTKSFGVRMSWDGPLSSVKLILQGKNLELTPAVKDYVEEKLGK 110
>gb|EPS59457.1| hypothetical protein M569_15350, partial [Genlisea aurea]
Length = 216
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = -3
Query: 124 RSAGVKMSWDGSLSSVKLILQGKNLELTPTVKSYVEEKLGK 2
R +G++MSWDG LSSVKLILQGKN EL+PTVK+YVEEKLGK
Sbjct: 1 RCSGIRMSWDGPLSSVKLILQGKNFELSPTVKNYVEEKLGK 41
>gb|EOY23705.1| Plastid-specific 30S ribosomal protein 1 [Theobroma cacao]
Length = 320
Score = 70.9 bits (172), Expect = 2e-10
Identities = 43/71 (60%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Frame = -3
Query: 205 SFSSQKSSFL---GLGFKAHEMVVPKRGIRRSAGVKMSWDGSLSSVKLILQGKNLELTPT 35
S S KSSFL G FK E P++ S V+MSWDG LSSVKLI+QGKNLELT T
Sbjct: 46 SLPSYKSSFLNPIGNSFKDIE-TEPRKSRVCSLTVRMSWDGPLSSVKLIIQGKNLELTDT 104
Query: 34 VKSYVEEKLGK 2
VK +VEEK+GK
Sbjct: 105 VKQHVEEKVGK 115
>ref|XP_006493202.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic-like
[Citrus sinensis]
Length = 319
Score = 69.3 bits (168), Expect = 5e-10
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = -3
Query: 196 SQKSSFLGLGFKAHEMVVPKRGIRRSAGVKMSWDGSLSSVKLILQGKNLELTPTVKSYVE 17
S SSF G FK ++ P + + V+MSWDG LSSVKLI+QGKNLELT TVK++VE
Sbjct: 61 SYNSSFFG-PFKQITVMRPTKVHTKPLPVRMSWDGPLSSVKLIIQGKNLELTDTVKNHVE 119
Query: 16 EKLGK 2
EK+GK
Sbjct: 120 EKVGK 124
>ref|XP_006441240.1| hypothetical protein CICLE_v10021260mg [Citrus clementina]
gi|557543502|gb|ESR54480.1| hypothetical protein
CICLE_v10021260mg [Citrus clementina]
Length = 313
Score = 69.3 bits (168), Expect = 5e-10
Identities = 38/65 (58%), Positives = 47/65 (72%)
Frame = -3
Query: 196 SQKSSFLGLGFKAHEMVVPKRGIRRSAGVKMSWDGSLSSVKLILQGKNLELTPTVKSYVE 17
S SSF G FK ++ P + + V+MSWDG LSSVKLI+QGKNLELT TVK++VE
Sbjct: 55 SYNSSFFG-PFKQITVMRPTKVHTKPLPVRMSWDGPLSSVKLIIQGKNLELTDTVKNHVE 113
Query: 16 EKLGK 2
EK+GK
Sbjct: 114 EKVGK 118
>ref|XP_006376595.1| hypothetical protein POPTR_0012s00590g [Populus trichocarpa]
gi|550326079|gb|ERP54392.1| hypothetical protein
POPTR_0012s00590g [Populus trichocarpa]
Length = 232
Score = 67.8 bits (164), Expect = 1e-09
Identities = 40/68 (58%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Frame = -3
Query: 199 SSQKSSFLGLGFKAHEMVVPKRGIRRSAG--VKMSWDGSLSSVKLILQGKNLELTPTVKS 26
SS KSSFLG E+ R G VKMSWDG L SVKLI+QGKNLELT TVK
Sbjct: 44 SSLKSSFLGKNMSFIELGRTARTPLTHGGCSVKMSWDGPLHSVKLIIQGKNLELTDTVKR 103
Query: 25 YVEEKLGK 2
+VE+K+GK
Sbjct: 104 HVEDKVGK 111
>ref|XP_006376594.1| hypothetical protein POPTR_0012s00590g [Populus trichocarpa]
gi|550326078|gb|ERP54391.1| hypothetical protein
POPTR_0012s00590g [Populus trichocarpa]
Length = 242
Score = 67.8 bits (164), Expect = 1e-09
Identities = 40/68 (58%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Frame = -3
Query: 199 SSQKSSFLGLGFKAHEMVVPKRGIRRSAG--VKMSWDGSLSSVKLILQGKNLELTPTVKS 26
SS KSSFLG E+ R G VKMSWDG L SVKLI+QGKNLELT TVK
Sbjct: 44 SSLKSSFLGKNMSFIELGRTARTPLTHGGCSVKMSWDGPLHSVKLIIQGKNLELTDTVKR 103
Query: 25 YVEEKLGK 2
+VE+K+GK
Sbjct: 104 HVEDKVGK 111
>ref|XP_002317839.1| 30S ribosomal family protein [Populus trichocarpa]
gi|222858512|gb|EEE96059.1| 30S ribosomal family protein
[Populus trichocarpa]
Length = 306
Score = 67.8 bits (164), Expect = 1e-09
Identities = 40/68 (58%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Frame = -3
Query: 199 SSQKSSFLGLGFKAHEMVVPKRGIRRSAG--VKMSWDGSLSSVKLILQGKNLELTPTVKS 26
SS KSSFLG E+ R G VKMSWDG L SVKLI+QGKNLELT TVK
Sbjct: 44 SSLKSSFLGKNMSFIELGRTARTPLTHGGCSVKMSWDGPLHSVKLIIQGKNLELTDTVKR 103
Query: 25 YVEEKLGK 2
+VE+K+GK
Sbjct: 104 HVEDKVGK 111
>ref|XP_006394705.1| hypothetical protein EUTSA_v10004495mg [Eutrema salsugineum]
gi|557091344|gb|ESQ31991.1| hypothetical protein
EUTSA_v10004495mg [Eutrema salsugineum]
Length = 352
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = -3
Query: 139 KRGIRRSAGVKMSWDGSLSSVKLILQGKNLELTPTVKSYVEEKLGK 2
K G RRS VKMSWDG L+SVKLI+QGKNLEL+ +K +VEEK+GK
Sbjct: 106 KLGRRRSLAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGK 151
>gb|EXB78385.1| 30S ribosomal protein 1 [Morus notabilis]
Length = 334
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/76 (51%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Frame = -3
Query: 217 PGPFSFSSQKSSFLG---LGFKAHEMVVPKRGIRRS-AGVKMSWDGSLSSVKLILQGKNL 50
P S +S+ S+FL + ++P+ R + V+MSWDG LSSVKLI+QGKNL
Sbjct: 45 PQILSLTSKSSTFLNPCKILKTVSVEIMPRNKCRGNFRSVRMSWDGPLSSVKLIIQGKNL 104
Query: 49 ELTPTVKSYVEEKLGK 2
ELT TVKS+VEEK+GK
Sbjct: 105 ELTETVKSHVEEKVGK 120
>ref|XP_006288304.1| hypothetical protein CARUB_v10001549mg [Capsella rubella]
gi|482557010|gb|EOA21202.1| hypothetical protein
CARUB_v10001549mg [Capsella rubella]
Length = 306
Score = 66.2 bits (160), Expect = 4e-09
Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Frame = -3
Query: 190 KSSFLG-LGFKAHEMVVPKRGIRRSAGVKMSWDGSLSSVKLILQGKNLELTPTVKSYVEE 14
+S FLG +G+ V P + S+ VKMSWDG L+SVKLI+QGKNLEL+ +K +VEE
Sbjct: 45 RSDFLGYMGYDDRRQVRPG-SCKSSSAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEE 103
Query: 13 KLGK 2
K+GK
Sbjct: 104 KVGK 107
>ref|XP_004307913.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 279
Score = 66.2 bits (160), Expect = 4e-09
Identities = 37/72 (51%), Positives = 45/72 (62%)
Frame = -3
Query: 217 PGPFSFSSQKSSFLGLGFKAHEMVVPKRGIRRSAGVKMSWDGSLSSVKLILQGKNLELTP 38
P SS S+FL + + R + GVKMSWDG LSSVKLI+QGK+LELT
Sbjct: 16 PQSSKLSSDFSNFLNPCQNLRPISISIRPRSKEHGVKMSWDGPLSSVKLIIQGKHLELTE 75
Query: 37 TVKSYVEEKLGK 2
VK +VEEK+GK
Sbjct: 76 PVKKHVEEKVGK 87
>ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, chloroplast precursor,
putative [Ricinus communis] gi|223536311|gb|EEF37962.1|
Plastid-specific 30S ribosomal protein 1, chloroplast
precursor, putative [Ricinus communis]
Length = 311
Score = 65.5 bits (158), Expect = 7e-09
Identities = 46/74 (62%), Positives = 52/74 (70%), Gaps = 6/74 (8%)
Frame = -3
Query: 205 SFS-SQKSSFL-----GLGFKAHEMVVPKRGIRRSAGVKMSWDGSLSSVKLILQGKNLEL 44
SFS S K+SFL G K E KRG RRSA V+MSW+G LSSVKLI QGKNLEL
Sbjct: 45 SFSLSSKTSFLNPLKLGSNVKYFEN---KRG-RRSA-VRMSWEGPLSSVKLITQGKNLEL 99
Query: 43 TPTVKSYVEEKLGK 2
T TVK +VE+K+GK
Sbjct: 100 TDTVKKHVEDKVGK 113
>ref|XP_002872116.1| hypothetical protein ARALYDRAFT_489312 [Arabidopsis lyrata subsp.
lyrata] gi|297317953|gb|EFH48375.1| hypothetical protein
ARALYDRAFT_489312 [Arabidopsis lyrata subsp. lyrata]
Length = 308
Score = 65.1 bits (157), Expect = 9e-09
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Frame = -3
Query: 190 KSSFLG-LGFKAHEMVVPKRGIRRSAGVKMSWDGSLSSVKLILQGKNLELTPTVKSYVEE 14
+S FLG +G+ V P + S VKMSWDG L+SVKLI+QGKNLEL+ +K +VEE
Sbjct: 45 RSDFLGHIGYDDRRQVRPSC-CKSSLAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEE 103
Query: 13 KLGK 2
K+GK
Sbjct: 104 KVGK 107
>ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloroplastic-like [Vitis
vinifera]
Length = 298
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = -3
Query: 112 VKMSWDGSLSSVKLILQGKNLELTPTVKSYVEEKLGK 2
V+MSWDG LSSVKLILQGKNLELT TV+S+VEEK+GK
Sbjct: 67 VRMSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGK 103
>ref|NP_001241953.1| uncharacterized protein LOC100784915 [Glycine max]
gi|255634767|gb|ACU17745.1| unknown [Glycine max]
Length = 291
Score = 64.3 bits (155), Expect = 2e-08
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Frame = -3
Query: 235 PNCSNNPGPFSFSSQKSSFLG----LGFKAHEMVVPKRGIRRSAGVKMSWDGSLSSVKLI 68
P+ ++ P F + ++FLG L + A +P R S MSWDG LSSVKL
Sbjct: 18 PSSPSSSYPHFFKTLSTTFLGHTVTLKYAATSASIPPR----SLSAHMSWDGPLSSVKLT 73
Query: 67 LQGKNLELTPTVKSYVEEKLGK 2
+QGKNLELT VK +VE+K+GK
Sbjct: 74 IQGKNLELTDAVKQHVEDKVGK 95
>ref|XP_003526761.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Glycine
max]
Length = 291
Score = 63.9 bits (154), Expect = 2e-08
Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Frame = -3
Query: 238 KPNCSNNPGPFSFSSQKSSFLGLGFKAHEMVVP-------KRGIRRSAGVKMSWDGSLSS 80
+P+C P S S+ L F H + + RG RS +MSWDG LSS
Sbjct: 12 RPSCYLPLSPSSSYPHFSNTLSTTFLGHIVTLKYAATSTSNRG--RSLSTRMSWDGPLSS 69
Query: 79 VKLILQGKNLELTPTVKSYVEEKLGK 2
VKLI+QGKNLELT VK +VE+K+GK
Sbjct: 70 VKLIIQGKNLELTDAVKQHVEDKVGK 95
>dbj|BAB11201.1| unnamed protein product [Arabidopsis thaliana]
Length = 365
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Frame = -3
Query: 190 KSSFLG-LGFKAHEMVVPKRGIRRSAGVKMSWDGSLSSVKLILQGKNLELTPTVKSYVEE 14
+S FLG +G++ V R S VKMSWDG L+SVKLI+QGKNLEL+ +K +VEE
Sbjct: 102 RSDFLGQIGYEDRRQVRHSY-CRSSLAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEE 160
Query: 13 KLGK 2
K+GK
Sbjct: 161 KVGK 164