BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00001436
         (2231 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]       731   0.0  
ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein...   711   0.0  
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein...   709   0.0  
gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao...   687   0.0  
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...   685   0.0  
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta...   682   0.0  
gb|EXB82802.1| RNA polymerase-associated protein RTF1-like prote...   679   0.0  
gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus...   679   0.0  
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein...   678   0.0  
gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus pe...   669   0.0  
ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein...   667   0.0  
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein...   664   0.0  
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop...   647   0.0  
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein...   645   0.0  
ref|XP_002316628.2| plus-3 domain-containing family protein [Pop...   645   0.0  
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr...   630   e-178
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein...   630   e-178
ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein...   625   e-176
ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis th...   603   e-170
gb|AAM10312.1| At1g61040/T7P1_17 [Arabidopsis thaliana]               603   e-170

>gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]
          Length = 643

 Score =  731 bits (1887), Expect = 0.0
 Identities = 396/617 (64%), Positives = 447/617 (72%), Gaps = 2/617 (0%)
 Frame = +1

Query: 157  MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 336
            MADLEKLLLEAAGRTTT                                    Y  RKPS
Sbjct: 1    MADLEKLLLEAAGRTTTSERNRPPSRRRRKHSNSDGGSDSRNDDSDGDHH---YSQRKPS 57

Query: 337  GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQLTE 516
             SQVPLKKR DPTDRDD RSSQ+G                +GSDLYKDE+DREKL++LTE
Sbjct: 58   SSQVPLKKRFDPTDRDD-RSSQDGDEINSNHERDSDNDT-IGSDLYKDEEDREKLSKLTE 115

Query: 517  LEREMILEARATKRSDRDLHEKFKKRKGQDRKGSPPKAHTRNM-RSKAERAGALDELVKX 693
            LEREMILE RATK SDRDL EK KKRKG D+K SP KAHTR+  RSKAERAGALDELVK 
Sbjct: 116  LEREMILEGRATKISDRDLTEKLKKRKGHDKKLSPAKAHTRSSTRSKAERAGALDELVKR 175

Query: 694  XXXXXXXXXXXX-YSPVKRRSFTAATLXXXXXXXXXXXXXXXXXXXXXXMADSDDDKMAS 870
                         YSPVKRRSFTAATL                      + DSD+DK  S
Sbjct: 176  RRDAVKGGTTRSRYSPVKRRSFTAATLSSPSHSDSRSQSGEGESTGDGGIGDSDEDKTQS 235

Query: 871  ESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCVVRNVD 1050
            +S VPTF+DIKEIT++RSKL KWFMEPFFDELI+GCFV+VGIGKSRSG +YRLCVVRNVD
Sbjct: 236  QSNVPTFDDIKEITVQRSKLLKWFMEPFFDELIIGCFVKVGIGKSRSGNVYRLCVVRNVD 295

Query: 1051 ASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAMISDSLPLKEEFDQWVREVERNGGH 1230
            +SDP R Y  +N+ THKYL++VWG+ESSAARWQM MIS+  P +EEFD W +EVER GG+
Sbjct: 296  SSDPSRAYDFENRKTHKYLSLVWGSESSAARWQMKMISNEAPKREEFDLWFKEVERTGGN 355

Query: 1231 MPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRRALEIAKE 1410
            MPT+QEV EK+EA+++ N FVYSAATVKQM+QEKKSAT +P+NVA EKDRLRRA+E+A+E
Sbjct: 356  MPTRQEVSEKREALQRINRFVYSAATVKQMVQEKKSATHKPINVALEKDRLRRAMEVARE 415

Query: 1411 NDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAEMNRRNRVENFKNASELKPVNTSLKA 1590
            NDD  E++ I+ +L ELE+SR+V EKDSKA KLAEMN +NR  NFKNASE+KPVNTSLKA
Sbjct: 416  NDDHDEMKEIQRKLSELESSRKVPEKDSKAAKLAEMNSKNRKANFKNASEMKPVNTSLKA 475

Query: 1591 GEAGYDPFSRRWTRSRNYYVANASGAEVVGNGDAIAALPGSNXXXXXXXXXXXXXXXXKL 1770
            GE GYDPFSRRWTRSRNYYV+NA+      NG A  A   +                 KL
Sbjct: 476  GEVGYDPFSRRWTRSRNYYVSNAATGIGEANGSANVASVAAT-----AAALEAAAGAGKL 530

Query: 1771 VDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 1950
            VDT+APVDQGTESNLLH+FELPISLA LQ+ GGPQGAQAG MARKQ IEA YGVKVPEND
Sbjct: 531  VDTNAPVDQGTESNLLHDFELPISLAALQRLGGPQGAQAGLMARKQWIEANYGVKVPEND 590

Query: 1951 GRRHALTLTVSDYKRRR 2001
            GRRHALTLTVSDYKRRR
Sbjct: 591  GRRHALTLTVSDYKRRR 607


>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1
            [Solanum lycopersicum] gi|460374083|ref|XP_004232841.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform 2 [Solanum lycopersicum]
          Length = 645

 Score =  711 bits (1836), Expect = 0.0
 Identities = 395/645 (61%), Positives = 447/645 (69%), Gaps = 29/645 (4%)
 Frame = +1

Query: 163  DLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPSGS 342
            +L  LLLEAAGRT T                                    Y  RK SGS
Sbjct: 4    ELTDLLLEAAGRTNTGGRNRPPHSSKRHHKSSYSDDGSDSRDDDSDDGR-GYSGRKLSGS 62

Query: 343  QVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQLTELE 522
            QVPLKKRLDP +RDDD SS  G                +GSDLYKD+DDR+KLAQ+TELE
Sbjct: 63   QVPLKKRLDPQERDDDHSSH-GEGNDGDGYGNESDDDSIGSDLYKDDDDRQKLAQMTELE 121

Query: 523  REMILEARATKRSDRDLHEKFKKRKGQDRKGSPPKAHTRNMRSK-------AERAGALDE 681
            REMIL  RA K+SDR LH+K  K + Q RK S P +H+R MRS        A+R  AL+E
Sbjct: 122  REMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADRDDALNE 181

Query: 682  L--------------VKXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXXXXXXXXX 819
            +               K             YSP+KRRSFTAA+L                
Sbjct: 182  IRAKRARQQQDPEGQFKLRDAARKGSGSRGYSPIKRRSFTAASLGSSPTRGESDSHSNEG 241

Query: 820  XXXXXX-MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGI 996
                   M DSDDDK + ES++PTFEDIKEI+IRRSKLAKWFMEPFFDELIVGCFVRVGI
Sbjct: 242  DSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGI 301

Query: 997  GKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAMISDSLP 1176
            G+SRSGPIYRLCVVRNVDASDP+RQYKL+NKTT K+LNVVWGNE+SAARWQMAMISDS P
Sbjct: 302  GRSRSGPIYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMISDSPP 361

Query: 1177 LKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKSATWRPL 1356
            L++EFDQWVREVER+GG MP+KQ+VLEKKEAI+K+N+FVYSA TVKQMLQ+KKSATWRPL
Sbjct: 362  LRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRPL 421

Query: 1357 NVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAEMNRRNRV 1536
            NVAAEKDRLRR +E+AK  +DE EV+RIK+RL+ELE SR+VQEKD KA +LAEMNR+NRV
Sbjct: 422  NVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELEDSRKVQEKDDKARRLAEMNRKNRV 481

Query: 1537 ENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAEVVGNGDAIAALPGS- 1713
            ENFKNASEL+PVN  LKAGEAGYDPFSRRWTRS NY+   AS  E      A+AA   + 
Sbjct: 482  ENFKNASELRPVNQLLKAGEAGYDPFSRRWTRSTNYFAKGASNGEAAA-AAALAAEDNNG 540

Query: 1714 ------NXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQ 1875
                                   KLVDT+APVDQGTESN LH+F+LPISLAVLQKFGG Q
Sbjct: 541  AGGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDFDLPISLAVLQKFGGSQ 600

Query: 1876 GAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 2010
            G QAGFMARKQ+IEA  G  VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 601  GGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 645


>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
            tuberosum]
          Length = 652

 Score =  709 bits (1831), Expect = 0.0
 Identities = 393/651 (60%), Positives = 448/651 (68%), Gaps = 35/651 (5%)
 Frame = +1

Query: 163  DLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPSGS 342
            +L  LLLEAAGRT T                                    Y  RK SGS
Sbjct: 4    ELTDLLLEAAGRTNTGGRNRPPQSSRRHHKSSYSDDGSDSRDDDSDDGR-GYSGRKLSGS 62

Query: 343  QVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQLTELE 522
            QVPLKKRLDP +RDDD SS  G                +GSDLYKD+DDR+KLAQ+TELE
Sbjct: 63   QVPLKKRLDPQERDDDHSSH-GEGNDGDGYGNESDDDSIGSDLYKDDDDRQKLAQMTELE 121

Query: 523  REMILEARATKRSDRDLHEKFKKRKGQDRKGSPPKAHTRNMRSK-------AERAGALDE 681
            REMIL  RA K+SDR LH+K  K + Q RK S P +H+R MRS        A+R  AL+E
Sbjct: 122  REMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADRDDALNE 181

Query: 682  L--------------VKXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXXXXXXXXX 819
            +               K             YSP+KRRSFTAATL                
Sbjct: 182  IRAKRARQQQDPEGQFKLRDAARKGSGGRGYSPIKRRSFTAATLGSSPTRGESDSHSNEG 241

Query: 820  XXXXXX-MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGI 996
                   M DSDDDK + ES++PTFEDIKEI+IRRSKLAKWFMEPFFDELIVGCFVRVGI
Sbjct: 242  DSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGI 301

Query: 997  GKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAMISDSLP 1176
            G+SRSGPIYRLCVVRNVD+SDP+RQYKL+NKTT K+LNVVWGNE+SAARWQMAM+SDS P
Sbjct: 302  GRSRSGPIYRLCVVRNVDSSDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMVSDSPP 361

Query: 1177 LKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKSATWRPL 1356
            L++EFDQWVREVER+GG MP+KQ+VLEKKEAI+K+N+FVYSA TVKQMLQ+KKSATWRPL
Sbjct: 362  LRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRPL 421

Query: 1357 NVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAEMNRRNRV 1536
            NVAAEKDRLRR +E+AK  +DE EV+RIK+RL+EL+ SR+VQEKD KA +LAEMNR+NRV
Sbjct: 422  NVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELDDSRKVQEKDDKARRLAEMNRKNRV 481

Query: 1537 ENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANAS-GAEVVGNGDAIAAL--- 1704
            ENFKNASEL+PVN  LKAG+AGYDPFSRRWTRS NY+   A+  AE   NG+  AA    
Sbjct: 482  ENFKNASELRPVNQLLKAGQAGYDPFSRRWTRSTNYFAKGANEEAEGASNGEVAAAAALA 541

Query: 1705 ---------PGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELPISLAVLQ 1857
                                         KLVDT+APVDQGTESN LH+F+LPISLAVLQ
Sbjct: 542  AEDNNGASGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDFDLPISLAVLQ 601

Query: 1858 KFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 2010
            KFGG QG QAGFMARKQ+IEA  G  VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 602  KFGGSQGGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 652


>gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao]
            gi|508781058|gb|EOY28314.1| PAF1 complex component
            isoform 1 [Theobroma cacao]
          Length = 660

 Score =  687 bits (1772), Expect = 0.0
 Identities = 382/660 (57%), Positives = 441/660 (66%), Gaps = 42/660 (6%)
 Frame = +1

Query: 157  MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 336
            MADLE LLLEAAGRT T                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60

Query: 337  GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXX---VGSDLYKDEDDREKLAQ 507
            GSQVPLKKRLDP +RDDD+ SQE                    VG DLYK+EDDR KLAQ
Sbjct: 61   GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120

Query: 508  LTELEREMILEARATKRSDRDLHEKFKKRKGQDR-----KGSPPKAHTRNMRSKA---ER 663
            +TELERE+IL  RA KR D+   EK + ++  DR     K +PP   +R +RS A   +R
Sbjct: 121  MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180

Query: 664  AGALDELV-----------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXX 792
            A A D+ +                 K              SPVKR+ FTA++L       
Sbjct: 181  AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQSD 240

Query: 793  XXXXXXXXXXXXXXX--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDEL 966
                             M DSDDD+       PTF+DIKEITIRRSKLAKWFMEPFF+EL
Sbjct: 241  SESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPFFEEL 300

Query: 967  IVGCFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARW 1146
            IVGC+VRVGIG+S+SGPIYRLC+VRNVDA++P+R YKL+NKTT+KYLNVVWGNESSAARW
Sbjct: 301  IVGCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARW 360

Query: 1147 QMAMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQ 1326
            QMAMISDS P +EEF Q +RE+ER+GG MP+KQ+VLEKKEA++K  +FVYSAATVKQMLQ
Sbjct: 361  QMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQ 420

Query: 1327 EKKSATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIK 1506
            EKKS + RPLN+AAEKDRLRR LEIA+   DE EV+RIK RL++LEASRQ QEKD+KA++
Sbjct: 421  EKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQEKDAKAVR 480

Query: 1507 LAEMNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAE--VVG 1680
            LAEMNR+NR ENFKNASELKPVNT LKAGEAGYDPFSRRWTRSRNYYVA   GA+   V 
Sbjct: 481  LAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGADAAAVA 540

Query: 1681 NGDAIAALPGSN----------XXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFE 1830
            NGD I  +   N                          KLVDTSAPVD+GTESN+LH+FE
Sbjct: 541  NGDRIGVIASGNGNDARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNMLHDFE 600

Query: 1831 LPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 2010
            +PISL  LQ+FGGPQGA AGFMARKQ+IEA  G +VPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601  IPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRGLL 660


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED:
            RNA polymerase-associated protein RTF1 homolog isoform X2
            [Glycine max]
          Length = 656

 Score =  685 bits (1767), Expect = 0.0
 Identities = 386/660 (58%), Positives = 449/660 (68%), Gaps = 42/660 (6%)
 Frame = +1

Query: 157  MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 336
            MADLE LLLEAAGRT T                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPSSRRRHDGAYSDGGSDSRDEDSDDELNYASRKPS 60

Query: 337  GSQVPLKKRLDPTDRDDDRSSQE--GXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQL 510
            GSQVPLKKRLDPT+RDDD  SQE                   +G DLYKDEDDR KL+++
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 511  TELEREMILEARATKRSDRDLHEKF--KKRKGQ---DRKGSPPKAHTRNMRSKAERAG-- 669
            TEL+REMIL  RATK+ D++L  K   K+ KG+    RK SPP + +R MR+ A  A   
Sbjct: 121  TELQREMILSDRATKKDDKNLLGKIASKREKGKVAVPRKQSPPMSSSR-MRASARSADRS 179

Query: 670  ----ALDELV------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXXX 801
                AL+EL             +             +SP KR+ FT+ +L          
Sbjct: 180  AKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSLSSSSHSESES 239

Query: 802  XXXXXXXXXXXX--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVG 975
                          + DSDDD+  + S+ P+F+D+KEITIRRSKLAKWFMEPFF+ELIVG
Sbjct: 240  RSHSDDEGSTGDGGIVDSDDDRALAGSEGPSFQDVKEITIRRSKLAKWFMEPFFEELIVG 299

Query: 976  CFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMA 1155
            CFVRVGIG+S++GPIYRLC+V+NVDAS+PDRQYKL+NKTT+KYLNVVWGNESSAARWQMA
Sbjct: 300  CFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMA 359

Query: 1156 MISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKK 1335
            M+SDS PL+EEF QWV+EV+R+GG MP+KQ+VLEKK+AI+K  +FVYSAATVKQMLQEKK
Sbjct: 360  MVSDSAPLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKK 419

Query: 1336 SATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAE 1515
            SA+ RPLNVAAEKDRLRR LEIA+   DE EV+RIK+RL ELEASRQ ++KD+KA+KLAE
Sbjct: 420  SASTRPLNVAAEKDRLRRELEIAQSKYDEAEVERIKTRLLELEASRQAKQKDAKALKLAE 479

Query: 1516 MNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVA-------------- 1653
            MNR+NR ENFKNASE+KPVNT LKAGEAGYDPFSRRWTRSRNYY A              
Sbjct: 480  MNRKNRFENFKNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNSVN 539

Query: 1654 -NASGAEVVGNGDAIAALPGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFE 1830
             N +GA   G G  + A  G                  KLVDTSAPVDQGTESN+LHNFE
Sbjct: 540  GNVAGAGSNGTGAPVTAEAG---MVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFE 596

Query: 1831 LPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 2010
            LPISLA+LQKFGG QGAQAGFMARKQ+IEA  G +V ENDGRRHALTLTVSDYKRRRGLL
Sbjct: 597  LPISLALLQKFGGAQGAQAGFMARKQKIEATVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
            gi|223541691|gb|EEF43239.1| RNA polymerase-associated
            protein RTF1, putative [Ricinus communis]
          Length = 660

 Score =  682 bits (1760), Expect = 0.0
 Identities = 375/661 (56%), Positives = 446/661 (67%), Gaps = 43/661 (6%)
 Frame = +1

Query: 157  MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 336
            MADLE LLLEAAGRT T                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60

Query: 337  GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXX---VGSDLYKDEDDREKLAQ 507
            GSQVPLKKRLDPT+RDDD+ SQ+                    VG DLYK+EDDR KLAQ
Sbjct: 61   GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKLAQ 120

Query: 508  LTELEREMILEARATKRSDRDLHEKFKKRKGQDR-----KGSPPKAHTRNMRSKA---ER 663
            ++ELEREMIL  RA K+ D++L E+ + ++  +R     K +PP   +R +R+ A   +R
Sbjct: 121  MSELEREMILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSARSADR 180

Query: 664  AGALDELV-----------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXX 792
            A A D+ +                 K             +SP+KR+ FT+A+L       
Sbjct: 181  AAAKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASLSSSSSES 240

Query: 793  XXXXXXXXXXXXXXX-MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELI 969
                            MADSDDD     S+ PTF+DI+EITIRRSKLAKWFMEP+F+ELI
Sbjct: 241  ESRSHSEDEGSTGDGGMADSDDDGEPG-SQGPTFDDIREITIRRSKLAKWFMEPWFEELI 299

Query: 970  VGCFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQ 1149
            VGCFVRVGIG+S+SGPIYRLC+VRNVDA+DPDR YKL+NKTT+KYLNV+WGNESSAARWQ
Sbjct: 300  VGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQ 359

Query: 1150 MAMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQE 1329
            MAMISDS P ++E+ QWVREVER+GG MPTKQ++LEKKEAI+K+N+FVYSAATVKQMLQE
Sbjct: 360  MAMISDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATVKQMLQE 419

Query: 1330 KKSATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKL 1509
            KKSA+ RPLNVAAEKDRLRR LE+A+   D+ EV+RI++R++ELEASRQ Q KD+KAI+L
Sbjct: 420  KKSASSRPLNVAAEKDRLRRELEVAQSKQDDAEVERIRARIQELEASRQTQGKDAKAIRL 479

Query: 1510 AEMNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAE------ 1671
            AEMNR+NR ENF+NASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYV+  +G +      
Sbjct: 480  AEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPAGGDAAAATN 539

Query: 1672 --------VVGNGDAIAALPGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNF 1827
                    V    ++ A +                    KLVDT+APVDQGTESN LHNF
Sbjct: 540  NEASGTVAVANKTESAAGVSAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHNF 599

Query: 1828 ELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGL 2007
            ELPISL  LQKFGG QGAQAGFMARKQ+IEA  G +V END +RH LTLTVSDYKRRRGL
Sbjct: 600  ELPISLTALQKFGGAQGAQAGFMARKQRIEATIGCRVSENDEKRHVLTLTVSDYKRRRGL 659

Query: 2008 L 2010
            L
Sbjct: 660  L 660


>gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus notabilis]
          Length = 658

 Score =  679 bits (1752), Expect = 0.0
 Identities = 376/658 (57%), Positives = 442/658 (67%), Gaps = 40/658 (6%)
 Frame = +1

Query: 157  MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 336
            MA+LE LLLEAAGRT +                                    Y NRKPS
Sbjct: 1    MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60

Query: 337  GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQLTE 516
            GSQVPLKKRLDPT+ DDD+ S+E                 VGSDLYKD+DDR KLA++TE
Sbjct: 61   GSQVPLKKRLDPTEMDDDQGSEEEGDDDRGSDREGDSESDVGSDLYKDDDDRRKLAEMTE 120

Query: 517  LEREMILEARATKRSDRDLHEKFKKR---KG---QDRKGSP-PKAHTRNMRSKAERAGAL 675
            L+REMIL  RA+K+ D++L EK + +   KG   Q RK +P P +  R+    A+RA A 
Sbjct: 121  LQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKETPLPSSRVRSSARSADRAAAK 180

Query: 676  DELV-----------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXXXX 804
            D+ +                 K                 KR+S+TA +L           
Sbjct: 181  DDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSDSESE 240

Query: 805  XXXXXXXXXXX--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGC 978
                         M DSDD++    S+  TF+DIKE+T+RRSKLAKW MEPFF+ELIVGC
Sbjct: 241  SQSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEELIVGC 300

Query: 979  FVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAM 1158
            FVRVGIG+S+SGPIYRLC+VRNVDAS+PDRQYKLDNK THKYLNVVWGNE+SAARWQMAM
Sbjct: 301  FVRVGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAARWQMAM 360

Query: 1159 ISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKS 1338
            +SDS+P +EEF QWVREVER+GG MPTK ++L+KKE+IKK N+FVYSAATVKQMLQEKKS
Sbjct: 361  VSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQMLQEKKS 420

Query: 1339 ATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAEM 1518
            A+ RPLN+A EKDRLRR LE+A+  +DE EV RIK+RL+ELEASR+ ++ D+KAI+LAEM
Sbjct: 421  ASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQTDAKAIRLAEM 480

Query: 1519 NRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANA------SGAEVVG 1680
            NR+NRVENFKNASELKPVNT LKAGEAGYDPFSRRWTRSRNYYV         SGA    
Sbjct: 481  NRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDSGANAGN 540

Query: 1681 NGDAIAA--------LPGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELP 1836
            NG +  A        +                    KLVDT+APVDQGT SN+LHNFELP
Sbjct: 541  NGASTDAENNGRHGIVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNMLHNFELP 600

Query: 1837 ISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 2010
            ISL+VLQKFGGPQGAQAGFMARKQ+IEA  G +VPENDGRRHALTL+V DYKRRRGLL
Sbjct: 601  ISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRRGLL 658


>gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
          Length = 654

 Score =  679 bits (1752), Expect = 0.0
 Identities = 383/658 (58%), Positives = 449/658 (68%), Gaps = 40/658 (6%)
 Frame = +1

Query: 157  MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 336
            MADLE LLLEAAGRT T                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 337  GSQVPLKKRLDPTDRDDDRSSQE---GXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQ 507
            GSQVPLKKRLDP++RDDD  SQE                    +G DLYKDEDDR KL++
Sbjct: 61   GSQVPLKKRLDPSERDDDLGSQEEADDDDGHSDHDGDSSDESNIGDDLYKDEDDRRKLSE 120

Query: 508  LTELEREMILEARATKRSDRDLHEKF--KKRKGQ---DRKGSPPKAHTRNMRSKAERAG- 669
            +TEL+REMIL  RATK+ D++L  K   K+ KG+    RK SPP + +R MR+ A  A  
Sbjct: 121  MTELQREMILSDRATKKDDKNLLGKIASKREKGKVSVPRKQSPPMSSSR-MRASARSADR 179

Query: 670  -----ALDELV------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXX 798
                 AL+EL             +             +SP KR+ FT+ +L         
Sbjct: 180  SAKNDALNELRAKRLKQQDPEAHRKLREASRNAGPRHFSPPKRKPFTSTSLSSSSHSESE 239

Query: 799  XXXXXXXXXXXXX--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIV 972
                           + DSDDD+  + S+ P+F+DIKEITIRRSKLAKWFMEPFF+ELIV
Sbjct: 240  SRSHSDDEGSTGDGGIGDSDDDRALTGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIV 299

Query: 973  GCFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQM 1152
            GCFVRVGIG+S++GPIYRLC+V+NVDAS+PDRQYKL+NKTT+KYLNVVWGNESSAARWQM
Sbjct: 300  GCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQM 359

Query: 1153 AMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEK 1332
            AM+SDS PL+EEF QWV+EV+R+GG MPTKQ+VLEKK+AI+K  +FVYSAATVKQMLQEK
Sbjct: 360  AMVSDSAPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAATVKQMLQEK 419

Query: 1333 KSATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLA 1512
            KSA+ RPLNVAAEKDRLRR LEIA+   DE EV RIK+RL+ELEASR  ++KD+KA+KLA
Sbjct: 420  KSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVDRIKARLQELEASRHAKQKDAKALKLA 479

Query: 1513 EMNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAEVVGNG-- 1686
            EMNR+NR ENFKNASELKPVNT LKAGEAGYDPFSRRWTRSRNYY    + A   GN   
Sbjct: 480  EMNRKNRFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYTGEKAAA---GNNSV 536

Query: 1687 DAIAALPGSN----------XXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELP 1836
            + I A PG+N                          KLVDTSAPVDQGTESN+LHNFELP
Sbjct: 537  NGIVAGPGTNSTGAPVTAEAGLVATAAALEAAADAGKLVDTSAPVDQGTESNMLHNFELP 596

Query: 1837 ISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 2010
            ISLA+LQK+GG QGAQAGFMARKQ+IE+  G +V ENDGRRH+LTL+VSDYKRRRGLL
Sbjct: 597  ISLALLQKYGGAQGAQAGFMARKQRIESTVGFRVLENDGRRHSLTLSVSDYKRRRGLL 654


>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
            max]
          Length = 656

 Score =  678 bits (1750), Expect = 0.0
 Identities = 382/657 (58%), Positives = 447/657 (68%), Gaps = 39/657 (5%)
 Frame = +1

Query: 157  MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 336
            MADLE LLLEAAGRT T                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 337  GSQVPLKKRLDPTDRDDDRSSQE--GXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQL 510
            GSQVPLKKRLDPT+RDDD  SQE                   +G DLYKDEDDR KL+++
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 511  TELEREMILEARATKRSDRDLHEKF--KKRKGQ---DRKGSPPKAHTRNMRSKAERAG-- 669
            TEL+REMIL  RATK+ D++L  K   K+ KG+    RK SPP + +R MR+ A  A   
Sbjct: 121  TELQREMILSDRATKKDDKNLLGKIASKREKGKAAAPRKQSPPMSSSR-MRASARSADRS 179

Query: 670  ----ALDELV------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXXX 801
                AL+EL             +             +SP KR++FT+ +L          
Sbjct: 180  AKNDALNELRAKRLKQQDPEAHRRLREASRNAGPRHFSPPKRKTFTSTSLSSSSHSESES 239

Query: 802  XXXXXXXXXXXX--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVG 975
                          +ADSDDD+  + S+ P+F+DIKEITIRRSKLAKWFMEPFF+ELIVG
Sbjct: 240  RSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVG 299

Query: 976  CFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMA 1155
            CFVRVGIG+S++GPIYRLC+V+NVDAS+PDRQYKL+NKTT+KYLNVVWGNESSAARWQMA
Sbjct: 300  CFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMA 359

Query: 1156 MISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKK 1335
            M+SDS P++EEF QWV+EV+ +GG MP+KQ+VLEKK+AI+K  +FVYSAATVKQMLQEKK
Sbjct: 360  MVSDSAPMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKK 419

Query: 1336 SATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAE 1515
            SA+ RPLNVAAEKDRLRR LEIA+   DE EV+RIK+RL+ELEASRQ ++KD+KA+KLAE
Sbjct: 420  SASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALKLAE 479

Query: 1516 MNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAEVVGNG--D 1689
            MNR+NR ENFKNASELKPVN  LKAGEAGYDPFSRRWTRSRNYY A        GN   +
Sbjct: 480  MNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNIVN 539

Query: 1690 AIAALPGSN----------XXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELPI 1839
               A  GSN                          KLVDTSAPVDQGTESN+LHNFELPI
Sbjct: 540  GNVAGAGSNATGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFELPI 599

Query: 1840 SLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 2010
            SLA+LQK+GG  GAQAGFMARKQ+IE+  G +V ENDGRRHALTLTVSDYKRRRGLL
Sbjct: 600  SLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


>gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
          Length = 646

 Score =  669 bits (1727), Expect = 0.0
 Identities = 371/654 (56%), Positives = 438/654 (66%), Gaps = 36/654 (5%)
 Frame = +1

Query: 157  MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 336
            MADLE LLLEAAGRT++                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTSSAGKSRHSHSSSRRRRGGSYSDGGSDSRGDDSDDGRGYASRKPS 60

Query: 337  GSQVPLKKRLDPTDRDDDRSSQE--GXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQL 510
            G+QVPLKKRLDPT+ DD++ SQE                   VGSDLYKDEDDR KLA++
Sbjct: 61   GTQVPLKKRLDPTEMDDEQGSQEEGDYNDSGSDRGGDSNESDVGSDLYKDEDDRRKLAEM 120

Query: 511  TELEREMILEARATKRSDRDLHEKFKKRKGQDRKGSPPKAHTRNMRSKAERAGALDELV- 687
            +EL+RE+IL  RA K+ D+ L EKF+ +K        P +  R+    A+RA A D+ + 
Sbjct: 121  SELQRELILSDRAQKKDDKSLKEKFRPKK---ETPPLPSSRVRSSARSADRAAAKDDALN 177

Query: 688  ----------------KXXXXXXXXXXXXXYSPVKRRSFTAA--TLXXXXXXXXXXXXXX 813
                            K             +S + R+SFTA   +               
Sbjct: 178  ELRAKRLKQQDPEAHRKLRDASRGSSGSRSFSHMTRKSFTAVGRSSSSQSDSDSRSHSED 237

Query: 814  XXXXXXXXMADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVG 993
                    M DSDD++    S+  TF+DIKEITIRRSKLAKW MEPFF+ELIVGCFVRVG
Sbjct: 238  DGSTGEDPMMDSDDER----SEGLTFDDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVG 293

Query: 994  IGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAMISDSL 1173
            IG+S+SGPIYRLC+VRNVDASDPDR+YKL+NKTTHKYLNVVWGNE+SAARWQMAMISDS 
Sbjct: 294  IGRSKSGPIYRLCMVRNVDASDPDRKYKLENKTTHKYLNVVWGNENSAARWQMAMISDSA 353

Query: 1174 PLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKSATWRP 1353
            PL+EEF QWVREVER+GG +P+KQ+VLEKKEAIKK N+FVYSAATVKQM++EKKSA+ RP
Sbjct: 354  PLEEEFKQWVREVERSGGRLPSKQDVLEKKEAIKKINTFVYSAATVKQMIEEKKSASSRP 413

Query: 1354 LNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAEMNRRNR 1533
            LN+A EKDRLRR LE+A+   D+ EV+RIK+RL++LEA RQ Q KDSKA++LAEMNR+NR
Sbjct: 414  LNIALEKDRLRRELEVAQSKHDDAEVERIKTRLQQLEARRQSQGKDSKAVRLAEMNRKNR 473

Query: 1534 VENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYV---------------ANASGA 1668
            VENFKNASELKPV T LKAGEAGYDPFSRRWTRSRNYYV               A+ + A
Sbjct: 474  VENFKNASELKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQKGEAEAIVDADGALA 533

Query: 1669 EVVGNGDAIAALPGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELPISLA 1848
            ++  NG A+     +                 KL+DTSAPVD GTESNL+HNFELPISLA
Sbjct: 534  DIESNGTAVVGAVRAG-MAATAAALEAAAGAGKLIDTSAPVDFGTESNLMHNFELPISLA 592

Query: 1849 VLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 2010
             LQKFGGPQGAQ GF+ARKQ+IEA  G +VPENDGRRHALTLTVSDYKRR GLL
Sbjct: 593  TLQKFGGPQGAQEGFLARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRMGLL 646


>ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Cicer arietinum] gi|502142571|ref|XP_004505023.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Cicer arietinum]
          Length = 658

 Score =  667 bits (1721), Expect = 0.0
 Identities = 377/659 (57%), Positives = 443/659 (67%), Gaps = 41/659 (6%)
 Frame = +1

Query: 157  MADLEKLLLEAAGRTT-TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKP 333
            MADLE LLLEAAGRT                                       YP+RKP
Sbjct: 1    MADLENLLLEAAGRTGGAAGRNRHSIPPSRRRRDGSYSDGGSDSRDDDSDDELNYPSRKP 60

Query: 334  SGSQVPLKKRLDPTDRDDDRSSQE---GXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLA 504
            SGSQVPLKKRLDPT+RDDD  SQE                    +G DLYKDEDDR KL+
Sbjct: 61   SGSQVPLKKRLDPTERDDDLGSQEEADDDDGRSDREGDSSDESNIGDDLYKDEDDRRKLS 120

Query: 505  QLTELEREMILEARATKRSDRDLHEKF--KKRKGQ---DRKGSPPKAHTRNMRSKAERAG 669
            +++EL+REMIL  RA+K+ D+ L  K   K+ KG+     K SPP + +R MR+ A  A 
Sbjct: 121  EMSELQREMILSDRASKKDDKSLLGKIASKREKGKAIMTGKQSPPLSSSR-MRASARSAD 179

Query: 670  ------ALDELV------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXX 795
                  AL+EL             +             +SP KR+SFT+A L        
Sbjct: 180  RSAKNVALNELRAKRLKQQDPEARRRLREASRNSGPRRFSPPKRKSFTSANLSSSSHSDS 239

Query: 796  XXXXXXXXXXXXXX--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELI 969
                            +ADSDDD+  S S+ P+F+DIKEITIRRSKLAKWFMEPFF+ELI
Sbjct: 240  DSRSHSDDEGSTGDGGIADSDDDRALSGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELI 299

Query: 970  VGCFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQ 1149
            VGCFVRVGIG+S++GPIYRLC+V+NVD+SDPDRQYKL+N+TTHKYLNVVWGNESSAARWQ
Sbjct: 300  VGCFVRVGIGRSKTGPIYRLCMVKNVDSSDPDRQYKLENRTTHKYLNVVWGNESSAARWQ 359

Query: 1150 MAMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQE 1329
            MAM+SDS PL+EEF QWV+EVER+GG MPTKQ+VLEKK+AI+K  +FVYSA TVKQMLQE
Sbjct: 360  MAMVSDSFPLEEEFKQWVKEVERSGGRMPTKQDVLEKKQAIQKIITFVYSADTVKQMLQE 419

Query: 1330 KKSATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKL 1509
            KKS++ RPLNVAAEKDRLRR +EIA+  +DE EV+RIK+R++ELEASR  + KD+KA+KL
Sbjct: 420  KKSSSSRPLNVAAEKDRLRREMEIAQSKNDEAEVERIKTRVQELEASRHAKVKDAKALKL 479

Query: 1510 AEMNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVA----------NA 1659
            AEMNR+NR ENFKNASEL+PVN  LKAGEAGYDPFSRRWTRSRNYYVA          N 
Sbjct: 480  AEMNRKNRFENFKNASELRPVNIGLKAGEAGYDPFSRRWTRSRNYYVAKPGEKAAARKNT 539

Query: 1660 SGAEVVGNGDAIAALP--GSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFEL 1833
            +   V   G  I  +P    +                KLVDTSAPVDQGTESN LHNFEL
Sbjct: 540  TNVLVADAGSNITGVPVTAESGVVATAAALEAAADAGKLVDTSAPVDQGTESNFLHNFEL 599

Query: 1834 PISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 2010
            PISLA+L K+GG QGAQAGFMARKQ++EA  G +V ENDGRRH LTL+V DYKRRRGLL
Sbjct: 600  PISLALLHKYGGAQGAQAGFMARKQRMEATVGFRVSENDGRRHVLTLSVGDYKRRRGLL 658


>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
            sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA
            polymerase-associated protein RTF1 homolog [Cucumis
            sativus]
          Length = 660

 Score =  664 bits (1714), Expect = 0.0
 Identities = 371/661 (56%), Positives = 440/661 (66%), Gaps = 43/661 (6%)
 Frame = +1

Query: 157  MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 336
            MADLE LLLEAAGRT                                      Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60

Query: 337  GSQVPLKKRLDPTDRDDDRSSQE---GXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQ 507
            GSQVPLKKRLDPT+RDDD  SQE                    VG DLYKD+DDR KLA 
Sbjct: 61   GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 508  LTELEREMILEARATKRSDRDLHEKFKKR--KGQD---RKGSPP--KAHTRNMRSKAERA 666
            ++EL+REMIL  RA+K++D+ L+E  + +  KG+    RK +PP   +  R+    A+RA
Sbjct: 121  MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180

Query: 667  GALDELV-----------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXX 795
             A D+ +                 K             +SP KR+ FTA +L        
Sbjct: 181  AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 796  XXXXXXXXXXXXXX--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELI 969
                            M DSDD++    S  PTFEDIKE+TIRRSKLAKW MEPFF+ELI
Sbjct: 241  ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300

Query: 970  VGCFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQ 1149
            VGCFVRVGIG+SRSGPIYRLC+VRNVDA++PDRQYKL+NK THKYLNV+WGNE+SAARWQ
Sbjct: 301  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360

Query: 1150 MAMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQE 1329
            MAM+SDS PL++E+ QWV+EVER GG M +KQ++LEKKEAI+K N+FVYSAATVKQMLQ+
Sbjct: 361  MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420

Query: 1330 KKSATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKL 1509
            KKSA+ RPLN+AAEKDRLRR +++A   +DE EV+RIK+RL++LEASR++Q KD+KAI+L
Sbjct: 421  KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480

Query: 1510 AEMNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANA----SGAEVV 1677
            AEMNR+NRVENFKNASEL+P+   LKAGEAGYDPFSRRWTRSRNYYV+NA      AE  
Sbjct: 481  AEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAA 539

Query: 1678 GNGDAI----------AALPGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNF 1827
            GN D +          A                      KLVDT+APVD GTESN LHNF
Sbjct: 540  GNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNF 599

Query: 1828 ELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGL 2007
            ELPISLA+LQKFGG  GAQAGF+ARKQ+IEA  G +VPENDGRRHALTLTVSDYKRRRGL
Sbjct: 600  ELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGL 659

Query: 2008 L 2010
            L
Sbjct: 660  L 660


>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|222848649|gb|EEE86196.1| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 662

 Score =  647 bits (1668), Expect = 0.0
 Identities = 359/663 (54%), Positives = 438/663 (66%), Gaps = 45/663 (6%)
 Frame = +1

Query: 157  MADLEKLLLEAAGRT-TTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKP 333
            MADLE LLLEAAGRT  +                                    Y NRKP
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSILPSRRRKREGSYSDGGSDSRDDDSDDDRGYANRKP 60

Query: 334  SGSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXX---VGSDLYKDEDDREKLA 504
            SGSQVPLKKRL+  +RD +  SQ+                    +G DLYKDEDDR+KLA
Sbjct: 61   SGSQVPLKKRLETNERDGEEGSQDEGDYDGGGSDREGGSSDESDIGDDLYKDEDDRKKLA 120

Query: 505  QLTELEREMILEARATKRSDRDLHEKFKKRKGQD-----RKGSPPKAHTRNMRSKA---E 660
            Q++EL+RE+IL  RA K+ D+ L EK + ++  D     RK +PP   +R +RS A   +
Sbjct: 121  QMSELDRELILADRADKKGDKHLTEKIRLKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180

Query: 661  RAGALDELV-----------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXX 789
            RA A D+ +                 K             +S VK+ +FT+A+L      
Sbjct: 181  RAAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASLSSSSSE 240

Query: 790  XXXXXXXXXXXXXXXX-MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDEL 966
                             MADSD+D +   SK PT+EDIKEITIRR+KLAKWFMEP+F+EL
Sbjct: 241  SGSRSHSEDEGSTGDGGMADSDED-VEPGSKGPTYEDIKEITIRRTKLAKWFMEPWFEEL 299

Query: 967  IVGCFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARW 1146
            I+GCFVRVGIG+S+SGP+YRLC+VRNVDA++PD+ YKL+NK+T+KYLNV WG ++SAARW
Sbjct: 300  IIGCFVRVGIGRSKSGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADTSAARW 359

Query: 1147 QMAMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQ 1326
            QMAM+SDS P +EE+ QWVREVE  GG +P+KQ++LEKKEAI+K+N+FVYSAATVKQMLQ
Sbjct: 360  QMAMVSDSGPTEEEYKQWVREVECGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQMLQ 419

Query: 1327 EKKSATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIK 1506
            EKKSA+ RPLNVAAEKDRLRR LEIA+   DE EV+RI +R++ELEASR  + KD+KAI+
Sbjct: 420  EKKSASSRPLNVAAEKDRLRRELEIAQSKHDEAEVERINARIEELEASRHAKVKDAKAIR 479

Query: 1507 LAEMNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAE----- 1671
            LAEMNR+NRVENF+NASE+KPVNT LKAGEAGYDPFSRRWTRSRNYYV+  + A+     
Sbjct: 480  LAEMNRKNRVENFRNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPAEADDPVAT 539

Query: 1672 ----------VVGNGDAIAALPGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLH 1821
                      V  +   +A +                    KLVDTSAPVDQGTESN +H
Sbjct: 540  KISEANETVAVAASNQVVAGVMSEAGVAATEAALEAAADAGKLVDTSAPVDQGTESNTMH 599

Query: 1822 NFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRR 2001
            +FEL ISL  LQ+FGGPQGAQAGFMARKQ+IEA  G +VPENDGRRHALTLTV DYKRRR
Sbjct: 600  SFELEISLIALQEFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVGDYKRRR 659

Query: 2002 GLL 2010
            GLL
Sbjct: 660  GLL 662


>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
            vesca subsp. vesca]
          Length = 657

 Score =  645 bits (1665), Expect = 0.0
 Identities = 367/662 (55%), Positives = 435/662 (65%), Gaps = 44/662 (6%)
 Frame = +1

Query: 157  MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 336
            MADL+ LLLEAAGRT++                                    Y +RKPS
Sbjct: 1    MADLDDLLLEAAGRTSSGRKSRHSHSSSKRRRDDSYSDGGSDSRGDDSDDGRGYASRKPS 60

Query: 337  GSQVPLKKRLDPTDRDDDRSSQE--GXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQL 510
            GSQVPLKKRLDP++  D+  SQ+                   VGSDLYKDE+DR KLA++
Sbjct: 61   GSQVPLKKRLDPSEVGDEHDSQDEGDYNDSGSDRGGESNESDVGSDLYKDENDRRKLAEM 120

Query: 511  TELEREMILEARATKRSDRDLHEKFKKR--KG---QDRKGSPP--KAHTRNMRSKAERAG 669
            +EL+RE+IL  RA K+ D+ L EKF+ +  KG   Q RK +PP   +  R+    A+RA 
Sbjct: 121  SELQRELILSDRAQKKDDKSLKEKFRPKWDKGKATQSRKVTPPLPSSRVRSSARSADRAA 180

Query: 670  ALDELV-----------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXX 798
            A D+ +                 K             +S   ++SF+A            
Sbjct: 181  AKDDALNELRAKRLKQQDPEAHRKLRDVSRGSVGSKNFSHTIKKSFSAVRRSSSSQSDSE 240

Query: 799  XXXXXXXXXXXXXMADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGC 978
                          A   DD+  ++    TFEDIKEITIRRS+LAKW MEPFF+ELIVGC
Sbjct: 241  SRSHSDDDGSSADDAIDSDDERGNQGL--TFEDIKEITIRRSRLAKWLMEPFFEELIVGC 298

Query: 979  FVRVGIGKSRSG-PIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMA 1155
             VRVGIGK++SG PIYRLC V NVD+SDPDRQYKL+NKTTHKYLNVVWGNE+SAARWQMA
Sbjct: 299  CVRVGIGKTKSGRPIYRLCSVCNVDSSDPDRQYKLENKTTHKYLNVVWGNENSAARWQMA 358

Query: 1156 MISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKK 1335
            M+SDSLPL+EE+DQWVREVE+NGG +P+K++VLEKKEAIKKTN+FVYSA TVKQM+QEKK
Sbjct: 359  MVSDSLPLEEEYDQWVREVEKNGGRLPSKEDVLEKKEAIKKTNTFVYSAKTVKQMIQEKK 418

Query: 1336 SATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAE 1515
            SA+ RPLN+A EKDRLRR LEIA+   D+ EV+RIK+RL++LEA +Q Q KDSKA++LAE
Sbjct: 419  SASSRPLNIALEKDRLRRELEIAQSKHDDAEVERIKARLEQLEARQQSQGKDSKAVRLAE 478

Query: 1516 MNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYV-----------ANAS 1662
            MNR+NRV+NFKNAS LKPV T LKAGEAGYDPFSRRWTRSRNYYV           ANA 
Sbjct: 479  MNRKNRVDNFKNASGLKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPDEQKDDAEANAV 538

Query: 1663 GAEVV------GNGDAIAALPGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHN 1824
             AE +      G G  +A   G                  KL+DT APVDQGT SN LHN
Sbjct: 539  AAESLAEVETNGTGGVVAVRAG---LEATAAALEAAAGAGKLIDTMAPVDQGTSSNPLHN 595

Query: 1825 FELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRG 2004
            FELPISLA LQKFGGPQGAQ GFMARKQ+IEA  GV+VPE+DGRRHALTL+VSDYKRRRG
Sbjct: 596  FELPISLATLQKFGGPQGAQEGFMARKQRIEATVGVRVPEDDGRRHALTLSVSDYKRRRG 655

Query: 2005 LL 2010
            LL
Sbjct: 656  LL 657


>ref|XP_002316628.2| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|550327599|gb|EEE97240.2| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 664

 Score =  645 bits (1664), Expect = 0.0
 Identities = 359/665 (53%), Positives = 436/665 (65%), Gaps = 47/665 (7%)
 Frame = +1

Query: 157  MADLEKLLLEAAGRT-TTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKP 333
            MADLE LLLEAAGRT  +                                    Y +RKP
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSLPPSRRRKQEGSYSDGGSDSRDDGSDDDRGYASRKP 60

Query: 334  SGSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXX---VGSDLYKDEDDREKLA 504
            SGSQVPLKKRL+  +RDD+  SQE                    +G DLYKDEDDR+KLA
Sbjct: 61   SGSQVPLKKRLETNERDDEGGSQEEGDYDDGGSDREGESSDGSDIGDDLYKDEDDRQKLA 120

Query: 505  QLTELEREMILEARATKRSDRDLHEKFKKRKGQD-----RKGSPPKAHTRNMRSKA---E 660
            Q++EL+RE+IL  RA K+ D+ L EK + ++  D     RK +PP   +R +RS A   +
Sbjct: 121  QMSELDRELILADRADKKGDKHLTEKIRSKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180

Query: 661  RAGALDELV-----------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXX 789
            RA A D+ +                 K             ++ VK+ +FT+A L      
Sbjct: 181  RAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSAGSRGFAQVKKNNFTSARLSSSSSE 240

Query: 790  XXXXXXXXXXXXXXXX---MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFD 960
                               MADSD+D     S+ PT+EDIKEITIRR+KLAKWFMEP+F+
Sbjct: 241  SESGSRSHSEDEGSTGDGGMADSDEDGDPG-SRGPTYEDIKEITIRRTKLAKWFMEPWFE 299

Query: 961  ELIVGCFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAA 1140
            ELI+GCFVRVGIG+S++GP+YRLC+VRNVDA++PD+ YKL+NK+T+KYLNV WG +SSAA
Sbjct: 300  ELIIGCFVRVGIGRSKTGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADSSAA 359

Query: 1141 RWQMAMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQM 1320
            RWQMAM+SDS P +EE+ QWVRE ER GG +P+KQ++LEKKEAI+K+N+FVYSAATVKQM
Sbjct: 360  RWQMAMVSDSAPTEEEYKQWVREAERGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQM 419

Query: 1321 LQEKKSATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKA 1500
            LQEKKSA+ RPLNVAAEKDRLRR LEIA+   DE EV+RI++R+ ELEASRQ + KD+KA
Sbjct: 420  LQEKKSASSRPLNVAAEKDRLRRELEIAQSRHDEAEVERIEARILELEASRQAKVKDAKA 479

Query: 1501 IKLAEMNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASG----- 1665
            ++LAEMNR+NRVENF+NASELKP+NT LKAGEAGYDPFSRRWTRSRNYYV+N +G     
Sbjct: 480  LRLAEMNRKNRVENFRNASELKPINTGLKAGEAGYDPFSRRWTRSRNYYVSNPAGGDDAV 539

Query: 1666 ----------AEVVGNGDAIAALPGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNL 1815
                      A V  +   +A     +                KLVDTSAPVDQGTESN 
Sbjct: 540  AASNSEANDTAAVADSDHVVAGAMSESGVAATAAALDAAADAGKLVDTSAPVDQGTESNT 599

Query: 1816 LHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKR 1995
            +HNFEL ISL  LQKF GPQGA AGFMARKQ+IEA  G +V ENDGRRHALTLTV DYKR
Sbjct: 600  MHNFELEISLIALQKFRGPQGAHAGFMARKQRIEANVGCQVRENDGRRHALTLTVGDYKR 659

Query: 1996 RRGLL 2010
            RRGLL
Sbjct: 660  RRGLL 664


>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
            gi|557524836|gb|ESR36142.1| hypothetical protein
            CICLE_v10028000mg [Citrus clementina]
          Length = 643

 Score =  630 bits (1626), Expect = e-178
 Identities = 360/655 (54%), Positives = 427/655 (65%), Gaps = 37/655 (5%)
 Frame = +1

Query: 157  MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 336
            MADLE LLLEAAGRT +                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNR--GYGSRKPS 58

Query: 337  GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQLTE 516
            GSQVPLKKRLDP +RDDD+ SQE                        +E D +   Q+TE
Sbjct: 59   GSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDS--------SNESDDDNHGQMTE 110

Query: 517  LEREMILEARATKRSDRDLHEKFKKRKGQ----DRKGSPPKAHTRNMR---SKAERAGAL 675
            LEREM++  R  K+ D++L +KF+ R+ +      K +PP   +R+ R     A+RA A 
Sbjct: 111  LEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAK 170

Query: 676  DELV-----------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXXXX 804
            D+ +                 +              SPVKR++FT A L           
Sbjct: 171  DDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESR 230

Query: 805  XXXXXXXXXXX--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGC 978
                         MADSDDD      + PT++DIKEITIRRSKLAKWFMEPFF+ELIVGC
Sbjct: 231  SHSDDEGSTGDGGMADSDDDGAPGSGR-PTYDDIKEITIRRSKLAKWFMEPFFEELIVGC 289

Query: 979  FVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAM 1158
            FVRVGIG+S++GPIYRLC+VRNVDA++PDR YKL+N+TT KYLNV WGNESSAARWQMAM
Sbjct: 290  FVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAM 349

Query: 1159 ISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKS 1338
            +SDS PL+EEF QW+REVERNGG MP+KQ+VLEKKE+I+K N+FVYSAATVKQMLQEKKS
Sbjct: 350  VSDSPPLEEEFKQWLREVERNGGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKS 409

Query: 1339 ATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAEM 1518
            A+ RPLNVAAEKDRLRR LE+A+   D+ +++RIK RL+ELEASR  + KD+KAI+LAEM
Sbjct: 410  ASSRPLNVAAEKDRLRRELEVAQSRHDDVDMERIKKRLQELEASRDSKVKDAKAIRLAEM 469

Query: 1519 NRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAEVV--GNGDA 1692
            NR+NRVENFKNASELK VNTSLKAGEAGYDPFSRRWTRSRNYY++   G EV    NGD 
Sbjct: 470  NRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISK-PGEEVTAEANGDK 528

Query: 1693 IAALPGSN---------XXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELPISL 1845
                 G+N                         KLVDT+AP+D GTESN+LH+FEL ISL
Sbjct: 529  NGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISL 588

Query: 1846 AVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 2010
              L+KFGGPQG  AGFMARKQ+IEA  G +VPENDGRRHALTLTV DYKRRRGLL
Sbjct: 589  NALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Citrus sinensis] gi|568867309|ref|XP_006486981.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Citrus sinensis]
          Length = 643

 Score =  630 bits (1625), Expect = e-178
 Identities = 360/655 (54%), Positives = 427/655 (65%), Gaps = 37/655 (5%)
 Frame = +1

Query: 157  MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 336
            MADLE LLLEAAGRT +                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNR--GYGSRKPS 58

Query: 337  GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQLTE 516
            GSQVPLKKRLDPT+RDDD+ SQE                        +E D +   Q+TE
Sbjct: 59   GSQVPLKKRLDPTERDDDQGSQEEGDYDGGASEHEGDS--------SNESDDDNHGQMTE 110

Query: 517  LEREMILEARATKRSDRDLHEKFKKRKGQ----DRKGSPPKAHTRNMR---SKAERAGAL 675
            LEREM++  R  K+ D++L +KF+ R+ +      K +PP   +R+ R     A+RA A 
Sbjct: 111  LEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAK 170

Query: 676  DELV-----------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXXXX 804
            D+ +                 +              SPVKR++FT A L           
Sbjct: 171  DDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESR 230

Query: 805  XXXXXXXXXXX--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGC 978
                         MADSDDD      + PT++DIKEITIRRSKLAKWFMEPFF+ELIVGC
Sbjct: 231  SHSDDEGSTGDGGMADSDDDGAPGSGR-PTYDDIKEITIRRSKLAKWFMEPFFEELIVGC 289

Query: 979  FVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAM 1158
            FVRVGIG+S++GPIYRLC+VRNVDA++PDR YKL+N+TT KYLNV WGNESSAARWQMAM
Sbjct: 290  FVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAM 349

Query: 1159 ISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKS 1338
            +SDS PL+EEF QW+REVERN G MP+KQ+VLEKK++I+K N+FVYSAATVKQMLQEKKS
Sbjct: 350  VSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKDSIQKINTFVYSAATVKQMLQEKKS 409

Query: 1339 ATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAEM 1518
            A+ RPLNVAAEKDRLRR LE+A+   DE +++RIK RL+ELEASR  + KD+KAI+LAEM
Sbjct: 410  ASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEM 469

Query: 1519 NRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAEVV--GNGDA 1692
            NR+NRVENFKNASELK VNTSLKAGEAGYDPFSRRWTRSRNYY++   G EV    NGD 
Sbjct: 470  NRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISK-PGEEVTAEANGDK 528

Query: 1693 IAALPGSN---------XXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELPISL 1845
                 G+N                         KLVDT+AP+D GTESN+LH+FEL ISL
Sbjct: 529  NGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISL 588

Query: 1846 AVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 2010
              L+KFGGPQG  AGFMARKQ+IEA  G +VPENDGRRHALTLTV DYKRRRGLL
Sbjct: 589  NALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Cicer arietinum] gi|502110282|ref|XP_004493843.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Cicer arietinum]
          Length = 653

 Score =  625 bits (1613), Expect = e-176
 Identities = 357/659 (54%), Positives = 425/659 (64%), Gaps = 41/659 (6%)
 Frame = +1

Query: 157  MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 336
            MADLEKLLLEAAGR                                       Y  RKPS
Sbjct: 1    MADLEKLLLEAAGRNI---HSLTPSRRKRRGEFLDGGSDSGDDDSDDDGDDHGYRGRKPS 57

Query: 337  GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQLTE 516
             +QVPLKKR + + +DDD S   G                VG DLYKDEDDR+KL+++TE
Sbjct: 58   ATQVPLKKRFETSGKDDDVS---GDDDGSDREGDSSEDSDVGDDLYKDEDDRQKLSEMTE 114

Query: 517  LEREMILEARATKRSDRDLHEKF--KKRKGQ----DRKGSPP--------KAHTRNMRSK 654
            L+REMIL  RA+K+ D+D   K   K+ KG      R+ SPP        +A  R+    
Sbjct: 115  LQREMILSDRASKKDDKDFLGKIASKREKGAKATLSRRESPPPPLLSSRVRASARSADRS 174

Query: 655  AERAGALDEL-----------VKXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXXX 801
            A + GAL+EL            K                +K + F +  L          
Sbjct: 175  AAKDGALNELRAKRLKQLDPEAKLKLKEGSKSGGRGLFSLKGKPFASTGLSSSSHSDSDS 234

Query: 802  XXXXXXXXXXXX--MADSDDDKMASES--KVPTFEDIKEITIRRSKLAKWFMEPFFDELI 969
                          + DSDDD++ + S  +VP+FEDIKEITIRRSKLAKWFMEPFF+ELI
Sbjct: 235  RSRSDDEGSNGDGGIIDSDDDRIMTGSGFEVPSFEDIKEITIRRSKLAKWFMEPFFEELI 294

Query: 970  VGCFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQ 1149
            VGCFVRVGIG+S++GPIYRLC+V+NVDASDPDRQYKLDNKTT+KYLNVVWGNE+SAARWQ
Sbjct: 295  VGCFVRVGIGRSKTGPIYRLCMVKNVDASDPDRQYKLDNKTTYKYLNVVWGNETSAARWQ 354

Query: 1150 MAMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQE 1329
            MAM+SDS PL+EEF QWV+EVER+GG M  K +V+EK +AI+K NSFVYSAATVKQM++E
Sbjct: 355  MAMVSDSPPLEEEFKQWVKEVERSGGRMLMKLDVMEKNQAIQKINSFVYSAATVKQMIEE 414

Query: 1330 KKSATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKL 1509
            KKS + RPLNVAAEKDRL+R LEIA+   D  EV++IK+RL+ELEASR+ Q KD+KA++L
Sbjct: 415  KKSNSRRPLNVAAEKDRLKRQLEIAESKKDAAEVEKIKTRLQELEASRKTQAKDAKALRL 474

Query: 1510 AEMNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAEVVGN-- 1683
            +EMNR+NR ENFKNASELKPVN  LKAGEAGYDPFSRRWTRSRNYY A  +     GN  
Sbjct: 475  SEMNRKNRFENFKNASELKPVNKGLKAGEAGYDPFSRRWTRSRNYYNAKQAEEAAAGNNS 534

Query: 1684 -GDAI---------AALPGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFEL 1833
             G A+         A + G                  KLVDT APVDQGTESN LHNFEL
Sbjct: 535  SGGAVGDRGSNGVGATVAGEAGVVATAEALEAAADAGKLVDTRAPVDQGTESNFLHNFEL 594

Query: 1834 PISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 2010
            PISL +LQKFGG QG  AGF+A+KQ+IE + G +VPENDG+ H LTLTVSDYKRRRGLL
Sbjct: 595  PISLTILQKFGGAQGVHAGFIAKKQRIEEIVGFRVPENDGKSHMLTLTVSDYKRRRGLL 653


>ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis thaliana]
            gi|12323334|gb|AAG51642.1|AC018908_8 unknown protein;
            78902-80833 [Arabidopsis thaliana]
            gi|332195649|gb|AEE33770.1| Paf1C-like transcription
            factor [Arabidopsis thaliana]
          Length = 643

 Score =  603 bits (1556), Expect = e-170
 Identities = 339/651 (52%), Positives = 410/651 (62%), Gaps = 33/651 (5%)
 Frame = +1

Query: 157  MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 336
            M DLE LLLEAAGRT +                                    Y +RKPS
Sbjct: 1    MGDLENLLLEAAGRTNSAGRSRHPPSSRRREGSYSDGSSDSRDDSDEDR---GYASRKPS 57

Query: 337  GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXX--VGSDLYKDEDDREKLAQL 510
            GSQVPLKKRL+  +R+D  +  EG                   G DLYK+E+DR+KLA +
Sbjct: 58   GSQVPLKKRLE-AEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGM 116

Query: 511  TELEREMILEARATKRSDRDLHEKFKKRKGQDR-----KGSPPKAHTRNMRSKA---ERA 666
            TE +REMIL  RA K+ D++  EK + ++  ++     K + P   +R +RS A   +RA
Sbjct: 117  TEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADRA 176

Query: 667  GALDE-----------------LVKXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXX 795
             A D+                 L K             +S  KR+   ++ L        
Sbjct: 177  AAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSDS 236

Query: 796  XXXXXXXXXXXXXXMADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVG 975
                          M DSDDD+    S VPTFED+KE+TIRRSKLAKW MEPFF+ELIVG
Sbjct: 237  DSRSQSDDEGSNGGMLDSDDDR----SDVPTFEDVKEVTIRRSKLAKWLMEPFFEELIVG 292

Query: 976  CFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMA 1155
            CFVRVGIG+S+SGPIYRLC V+NVDA+DPD+ YKL+NKTTHKYLNVVWGNE+SAARWQMA
Sbjct: 293  CFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMA 352

Query: 1156 MISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKK 1335
            MISD  PL+EE+ QW+REVER  G MPTKQ++ EKKEAI++TNSFVYSA TVKQMLQEKK
Sbjct: 353  MISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQEKK 412

Query: 1336 SATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAE 1515
            SA+ RP+NVAAEKDRLR+ LEIA+  +DE  V+RIKS++K+L+ASR  +  D KA+KLAE
Sbjct: 413  SASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALKLAE 472

Query: 1516 MNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAEVVGNGDAI 1695
            MN++NR ENFKNASE+K +  SLKAGEAGYDPFSRRWTRS NYY     G +   N  A+
Sbjct: 473  MNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENEAAV 532

Query: 1696 AALPGSN------XXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELPISLAVLQ 1857
            AA   +N                      KL+DT AP+ QG E N LHNFEL +SL  LQ
Sbjct: 533  AAAVETNGADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNFELSLSLTALQ 592

Query: 1858 KFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 2010
            K+GGPQG Q  FMARKQ  EA  G +V ENDG+RH LTLTVSDYKRRRGLL
Sbjct: 593  KYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 643


>gb|AAM10312.1| At1g61040/T7P1_17 [Arabidopsis thaliana]
          Length = 643

 Score =  603 bits (1556), Expect = e-170
 Identities = 339/651 (52%), Positives = 410/651 (62%), Gaps = 33/651 (5%)
 Frame = +1

Query: 157  MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 336
            M DLE LLLEAAGRT +                                    Y +RKPS
Sbjct: 1    MGDLENLLLEAAGRTNSAGRSSHPPSSRRREGSYSDGSSDSRDDSDEDR---GYASRKPS 57

Query: 337  GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXX--VGSDLYKDEDDREKLAQL 510
            GSQVPLKKRL+  +R+D  +  EG                   G DLYK+E+DR+KLA +
Sbjct: 58   GSQVPLKKRLE-AEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGM 116

Query: 511  TELEREMILEARATKRSDRDLHEKFKKRKGQDR-----KGSPPKAHTRNMRSKA---ERA 666
            TE +REMIL  RA K+ D++  EK + ++  ++     K + P   +R +RS A   +RA
Sbjct: 117  TEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADRA 176

Query: 667  GALDE-----------------LVKXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXX 795
             A D+                 L K             +S  KR+   ++ L        
Sbjct: 177  AAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSDS 236

Query: 796  XXXXXXXXXXXXXXMADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVG 975
                          M DSDDD+    S VPTFED+KE+TIRRSKLAKW MEPFF+ELIVG
Sbjct: 237  DSRSQSDDEGSNGGMLDSDDDR----SDVPTFEDVKEVTIRRSKLAKWLMEPFFEELIVG 292

Query: 976  CFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMA 1155
            CFVRVGIG+S+SGPIYRLC V+NVDA+DPD+ YKL+NKTTHKYLNVVWGNE+SAARWQMA
Sbjct: 293  CFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMA 352

Query: 1156 MISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKK 1335
            MISD  PL+EE+ QW+REVER  G MPTKQ++ EKKEAI++TNSFVYSA TVKQMLQEKK
Sbjct: 353  MISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQEKK 412

Query: 1336 SATWRPLNVAAEKDRLRRALEIAKENDDETEVQRIKSRLKELEASRQVQEKDSKAIKLAE 1515
            SA+ RP+NVAAEKDRLR+ LEIA+  +DE  V+RIKS++K+L+ASR  +  D KA+KLAE
Sbjct: 413  SASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALKLAE 472

Query: 1516 MNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAEVVGNGDAI 1695
            MN++NR ENFKNASE+K +  SLKAGEAGYDPFSRRWTRS NYY     G +   N  A+
Sbjct: 473  MNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENEAAV 532

Query: 1696 AALPGSN------XXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELPISLAVLQ 1857
            AA   +N                      KL+DT AP+ QG E N LHNFEL +SL  LQ
Sbjct: 533  AAAVETNGADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNFELSLSLTALQ 592

Query: 1858 KFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 2010
            K+GGPQG Q  FMARKQ  EA  G +V ENDG+RH LTLTVSDYKRRRGLL
Sbjct: 593  KYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 643