BLASTX nr result
ID: Rehmannia22_contig00001027
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00001027
(780 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, ... 187 3e-45
gb|EPS61062.1| hypothetical protein M569_13739, partial [Genlise... 186 1e-44
ref|XP_004247753.1| PREDICTED: 50S ribosomal protein L28, chloro... 179 7e-43
ref|XP_006354458.1| PREDICTED: 50S ribosomal protein L28, chloro... 176 8e-42
emb|CBI23685.3| unnamed protein product [Vitis vinifera] 174 2e-41
ref|XP_002285387.1| PREDICTED: 50S ribosomal protein L28, chloro... 174 2e-41
gb|EOY06128.1| Ribosomal L28 family [Theobroma cacao] 174 3e-41
ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloro... 172 1e-40
ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloro... 172 2e-40
ref|XP_006420294.1| hypothetical protein CICLE_v10006136mg [Citr... 168 2e-39
ref|XP_002315574.2| hypothetical protein POPTR_0010s07920g [Popu... 167 5e-39
gb|ABK95755.1| unknown [Populus trichocarpa] 167 5e-39
gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides] 166 6e-39
ref|XP_006489673.1| PREDICTED: 50S ribosomal protein L28, chloro... 164 2e-38
ref|XP_002892218.1| 50S ribosomal protein L28, chloroplast [Arab... 160 3e-37
ref|XP_002528814.1| 50S ribosomal protein L28, chloroplast precu... 159 1e-36
ref|XP_002312590.2| hypothetical protein POPTR_0008s16970g [Popu... 157 3e-36
ref|XP_004296393.1| PREDICTED: 50S ribosomal protein L28, chloro... 157 5e-36
gb|AFK44373.1| unknown [Medicago truncatula] 156 7e-36
ref|NP_565765.1| 50S ribosomal protein L28 [Arabidopsis thaliana... 156 9e-36
>sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, chloroplastic; AltName:
Full=CL28; Flags: Precursor gi|279656|pir||R5NT28
ribosomal protein L28 precursor, chloroplast - tobacco
gi|189096147|pdb|3BBO|Y Chain Y, Homology Model For The
Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em
Map Of The 70s Chlororibosome gi|20016|emb|CAA48211.1|
ribosomal protein CL28 [Nicotiana tabacum]
Length = 151
Score = 187 bits (475), Expect = 3e-45
Identities = 93/111 (83%), Positives = 101/111 (90%)
Frame = +3
Query: 228 VASQLSGIKISTTHFQKIAPLPISAPLRPSLQPVARRICPFTGKKSNKANKVSHSNHKTI 407
V SQLSG+KIS+THF + P+S P +PSLQPVARRICPFTGKKSN+ANKVSHSNHKT
Sbjct: 41 VTSQLSGLKISSTHFIS-SSAPLSVPFKPSLQPVARRICPFTGKKSNRANKVSHSNHKTK 99
Query: 408 RRQFVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
+ QFVNLQYK+IWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK
Sbjct: 100 KLQFVNLQYKRIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 150
>gb|EPS61062.1| hypothetical protein M569_13739, partial [Genlisea aurea]
Length = 115
Score = 186 bits (471), Expect = 1e-44
Identities = 90/111 (81%), Positives = 99/111 (89%)
Frame = +3
Query: 228 VASQLSGIKISTTHFQKIAPLPISAPLRPSLQPVARRICPFTGKKSNKANKVSHSNHKTI 407
++SQ G+KIS + + KI+PL S+P RP LQPVARR CPFTGKK NKAN+VSHSNHKT
Sbjct: 4 ISSQFGGLKISLSRYPKISPLRDSSPSRPCLQPVARRTCPFTGKKPNKANRVSHSNHKTT 63
Query: 408 RRQFVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
RRQFVNLQYK+IWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK
Sbjct: 64 RRQFVNLQYKRIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 114
>ref|XP_004247753.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Solanum
lycopersicum]
Length = 149
Score = 179 bits (455), Expect = 7e-43
Identities = 98/153 (64%), Positives = 112/153 (73%), Gaps = 3/153 (1%)
Frame = +3
Query: 111 MATITATL---GPVMAGVALAKSQNFXXXXXXXXXXXXXXXXVASQLSGIKISTTHFQKI 281
MATITA + GPV+ G ++ V SQLSGIKIS+TH
Sbjct: 1 MATITAGISLRGPVVGGY---RTFAVTKRALPKVKFSSELSFVTSQLSGIKISSTHLS-- 55
Query: 282 APLPISAPLRPSLQPVARRICPFTGKKSNKANKVSHSNHKTIRRQFVNLQYKKIWWEAGK 461
+P +S P + +LQPVARR+CPFTGKKSN+ANKVSHSNHKT + QFVNLQYK+IWWE GK
Sbjct: 56 SPASLSVPFKTALQPVARRVCPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIWWEEGK 115
Query: 462 RYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
R+VKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK
Sbjct: 116 RFVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 148
>ref|XP_006354458.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Solanum
tuberosum]
Length = 149
Score = 176 bits (446), Expect = 8e-42
Identities = 97/152 (63%), Positives = 113/152 (74%), Gaps = 2/152 (1%)
Frame = +3
Query: 111 MATITATLGPVMAGVALAKSQNFXXXXXXXXXXXXXXXX--VASQLSGIKISTTHFQKIA 284
MATITA G + G A++ ++ F + SQLSGIKIS+T+ +
Sbjct: 1 MATITA--GISLRGPAVSGNRTFAVTKRALPKLKLSSELSFLTSQLSGIKISSTNLS--S 56
Query: 285 PLPISAPLRPSLQPVARRICPFTGKKSNKANKVSHSNHKTIRRQFVNLQYKKIWWEAGKR 464
P +S P + +LQPVARRICPFTGKKSN+ANKVSHSNHKT + QFVNLQYK+IWWE GKR
Sbjct: 57 PASLSVPFKTALQPVARRICPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIWWEEGKR 116
Query: 465 YVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
+VKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK
Sbjct: 117 FVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 148
>emb|CBI23685.3| unnamed protein product [Vitis vinifera]
Length = 118
Score = 174 bits (442), Expect = 2e-41
Identities = 89/111 (80%), Positives = 95/111 (85%)
Frame = +3
Query: 228 VASQLSGIKISTTHFQKIAPLPISAPLRPSLQPVARRICPFTGKKSNKANKVSHSNHKTI 407
V SQ GIKIS TH Q P+P SAPL L+PVARR+CPFTGKK+NKANKVS SNHKT
Sbjct: 8 VTSQFGGIKISCTHLQLPNPIP-SAPLTLPLRPVARRVCPFTGKKANKANKVSFSNHKTK 66
Query: 408 RRQFVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
+ QFVNLQYKKIWWEAGKRYVKLRLSTKA+KTIEKNGLDAVAKKAGIDL K
Sbjct: 67 KLQFVNLQYKKIWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 117
>ref|XP_002285387.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Vitis
vinifera]
Length = 146
Score = 174 bits (442), Expect = 2e-41
Identities = 89/111 (80%), Positives = 95/111 (85%)
Frame = +3
Query: 228 VASQLSGIKISTTHFQKIAPLPISAPLRPSLQPVARRICPFTGKKSNKANKVSHSNHKTI 407
V SQ GIKIS TH Q P+P SAPL L+PVARR+CPFTGKK+NKANKVS SNHKT
Sbjct: 36 VTSQFGGIKISCTHLQLPNPIP-SAPLTLPLRPVARRVCPFTGKKANKANKVSFSNHKTK 94
Query: 408 RRQFVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
+ QFVNLQYKKIWWEAGKRYVKLRLSTKA+KTIEKNGLDAVAKKAGIDL K
Sbjct: 95 KLQFVNLQYKKIWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 145
>gb|EOY06128.1| Ribosomal L28 family [Theobroma cacao]
Length = 144
Score = 174 bits (441), Expect = 3e-41
Identities = 88/112 (78%), Positives = 99/112 (88%), Gaps = 1/112 (0%)
Frame = +3
Query: 228 VASQLSGIKISTTHFQKIAPL-PISAPLRPSLQPVARRICPFTGKKSNKANKVSHSNHKT 404
V SQLSG+KIS + +AP+ PISAP P+L+PVARR+CPFTGKK+NKANKVS SNHKT
Sbjct: 33 VTSQLSGVKISY-NIPDLAPIKPISAPFTPALRPVARRVCPFTGKKANKANKVSFSNHKT 91
Query: 405 IRRQFVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
+ QFVNLQYKK+WWEAGKRYVKLRLSTKA+KTIEKNGLDAVAKKAGIDL K
Sbjct: 92 KKLQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 143
>ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cucumis
sativus]
Length = 150
Score = 172 bits (436), Expect = 1e-40
Identities = 89/112 (79%), Positives = 98/112 (87%), Gaps = 1/112 (0%)
Frame = +3
Query: 228 VASQLSGIKISTTHFQKIAPLPIS-APLRPSLQPVARRICPFTGKKSNKANKVSHSNHKT 404
+ SQLSGI+IS+ H I+P IS APLRPSLQPVARRICPFTGKK+NK N VS SNHKT
Sbjct: 39 LTSQLSGIRISSNH-SLISPASISTAPLRPSLQPVARRICPFTGKKANKKNLVSFSNHKT 97
Query: 405 IRRQFVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
+ QFVNLQYKK+WWEAGKR+VKLRLSTKA+KTIEKNGLDAVAKKAGIDL K
Sbjct: 98 KKLQFVNLQYKKVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 149
>ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cucumis
sativus]
Length = 150
Score = 172 bits (435), Expect = 2e-40
Identities = 89/112 (79%), Positives = 98/112 (87%), Gaps = 1/112 (0%)
Frame = +3
Query: 228 VASQLSGIKISTTHFQKIAPLPIS-APLRPSLQPVARRICPFTGKKSNKANKVSHSNHKT 404
+ SQLSGI+IS+ H I+P IS APLRPSLQPVARRICPFTGKK+NK N VS SNHKT
Sbjct: 39 LTSQLSGIRISSNH-SLISPSSISTAPLRPSLQPVARRICPFTGKKANKKNLVSFSNHKT 97
Query: 405 IRRQFVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
+ QFVNLQYKK+WWEAGKR+VKLRLSTKA+KTIEKNGLDAVAKKAGIDL K
Sbjct: 98 KKLQFVNLQYKKVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 149
>ref|XP_006420294.1| hypothetical protein CICLE_v10006136mg [Citrus clementina]
gi|557522167|gb|ESR33534.1| hypothetical protein
CICLE_v10006136mg [Citrus clementina]
Length = 154
Score = 168 bits (426), Expect = 2e-39
Identities = 88/112 (78%), Positives = 94/112 (83%), Gaps = 1/112 (0%)
Frame = +3
Query: 228 VASQLSGIKISTTHFQKIAPLPISAPLRPSLQP-VARRICPFTGKKSNKANKVSHSNHKT 404
V SQLSGIKIS + P+ S P P LQP VARR+CPFTGKKSNKANKVS SNHKT
Sbjct: 43 VTSQLSGIKISYSLPDVATPIS-SRPFAPGLQPIVARRVCPFTGKKSNKANKVSFSNHKT 101
Query: 405 IRRQFVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
+RQFVNLQYKK+WWEAGKRYVKLRLSTKA+KTIEKNGLDAVAKKAGIDL K
Sbjct: 102 TKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 153
>ref|XP_002315574.2| hypothetical protein POPTR_0010s07920g [Populus trichocarpa]
gi|550329333|gb|EEF01745.2| hypothetical protein
POPTR_0010s07920g [Populus trichocarpa]
Length = 153
Score = 167 bits (422), Expect = 5e-39
Identities = 86/112 (76%), Positives = 95/112 (84%), Gaps = 1/112 (0%)
Frame = +3
Query: 228 VASQLSGIKISTTHFQKIAPLPISAPLRPSLQPV-ARRICPFTGKKSNKANKVSHSNHKT 404
V SQLSGI+IS P P+SAP P+LQPV ARRICPFTGKK+N+ANKVS SNHKT
Sbjct: 46 VTSQLSGIRISYN-----PPKPLSAPFSPALQPVIARRICPFTGKKANRANKVSFSNHKT 100
Query: 405 IRRQFVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
+ QFVNLQYK++WWEAGKRYVKLRLSTKA+KTIEKNGLDAVAKKAGIDL K
Sbjct: 101 KKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 152
>gb|ABK95755.1| unknown [Populus trichocarpa]
Length = 150
Score = 167 bits (422), Expect = 5e-39
Identities = 86/112 (76%), Positives = 95/112 (84%), Gaps = 1/112 (0%)
Frame = +3
Query: 228 VASQLSGIKISTTHFQKIAPLPISAPLRPSLQPV-ARRICPFTGKKSNKANKVSHSNHKT 404
V SQLSGI+IS P P+SAP P+LQPV ARRICPFTGKK+N+ANKVS SNHKT
Sbjct: 43 VTSQLSGIRISYN-----PPKPLSAPFSPALQPVIARRICPFTGKKANRANKVSFSNHKT 97
Query: 405 IRRQFVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
+ QFVNLQYK++WWEAGKRYVKLRLSTKA+KTIEKNGLDAVAKKAGIDL K
Sbjct: 98 KKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 149
>gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 153
Score = 166 bits (421), Expect = 6e-39
Identities = 86/112 (76%), Positives = 95/112 (84%), Gaps = 1/112 (0%)
Frame = +3
Query: 228 VASQLSGIKISTTHFQKIAPLPISAPLRPSLQPV-ARRICPFTGKKSNKANKVSHSNHKT 404
V SQLSGI+IS P P+SAP P+LQPV ARRICPFTGKK+N+ANKVS SNHKT
Sbjct: 46 VTSQLSGIRISYN-----PPEPLSAPFSPALQPVIARRICPFTGKKANRANKVSFSNHKT 100
Query: 405 IRRQFVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
+ QFVNLQYK++WWEAGKRYVKLRLSTKA+KTIEKNGLDAVAKKAGIDL K
Sbjct: 101 KKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 152
>ref|XP_006489673.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Citrus
sinensis]
Length = 154
Score = 164 bits (416), Expect = 2e-38
Identities = 87/112 (77%), Positives = 92/112 (82%), Gaps = 1/112 (0%)
Frame = +3
Query: 228 VASQLSGIKISTTHFQKIAPLPISAPLRPSLQP-VARRICPFTGKKSNKANKVSHSNHKT 404
V SQLSGIKIS P+ S P P LQP VARR+CPFTGKKSNKANKVS SNHKT
Sbjct: 43 VTSQLSGIKISYRLPDVATPIS-SRPFAPGLQPIVARRVCPFTGKKSNKANKVSFSNHKT 101
Query: 405 IRRQFVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
+RQFVNLQYKK+WWEAGKRYVKLRLSTKA+KTIEKNGLDAVAKKA IDL K
Sbjct: 102 TKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKARIDLRK 153
>ref|XP_002892218.1| 50S ribosomal protein L28, chloroplast [Arabidopsis lyrata subsp.
lyrata] gi|297338060|gb|EFH68477.1| 50S ribosomal
protein L28, chloroplast [Arabidopsis lyrata subsp.
lyrata]
Length = 137
Score = 160 bits (406), Expect = 3e-37
Identities = 85/112 (75%), Positives = 95/112 (84%), Gaps = 1/112 (0%)
Frame = +3
Query: 228 VASQLSGIKISTTHFQKIAPLPISAPLRPSLQP-VARRICPFTGKKSNKANKVSHSNHKT 404
+ SQLSG++IS H A I+ P PSLQP VARRICPFTGKK+N+ANKVS SNHKT
Sbjct: 27 LTSQLSGVRIS--HGYSDAINRITLPSVPSLQPIVARRICPFTGKKANRANKVSFSNHKT 84
Query: 405 IRRQFVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
+ QFVNLQYKK+WWEAGKR+VKLRLSTKA+KTIEKNGLDAVAKKAGIDLSK
Sbjct: 85 KKLQFVNLQYKKVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLSK 136
>ref|XP_002528814.1| 50S ribosomal protein L28, chloroplast precursor, putative [Ricinus
communis] gi|223531726|gb|EEF33548.1| 50S ribosomal
protein L28, chloroplast precursor, putative [Ricinus
communis]
Length = 143
Score = 159 bits (402), Expect = 1e-36
Identities = 87/113 (76%), Positives = 93/113 (82%), Gaps = 2/113 (1%)
Frame = +3
Query: 228 VASQLSGIKISTTHFQKIAPLP-ISAPLRPSLQP-VARRICPFTGKKSNKANKVSHSNHK 401
V SQLSGIKIS LP +S P P LQ VARR+CPFTGKK+N+ANKVS SNHK
Sbjct: 37 VTSQLSGIKISYN-------LPYLSNPTTPPLQSIVARRVCPFTGKKANRANKVSFSNHK 89
Query: 402 TIRRQFVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
T + QFVNLQYKKIWWEAGKRYVKLRLSTKA+KTIEKNGLDAVAKKAGIDLSK
Sbjct: 90 TKKLQFVNLQYKKIWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLSK 142
>ref|XP_002312590.2| hypothetical protein POPTR_0008s16970g [Populus trichocarpa]
gi|550333255|gb|EEE89957.2| hypothetical protein
POPTR_0008s16970g [Populus trichocarpa]
Length = 104
Score = 157 bits (398), Expect = 3e-36
Identities = 79/108 (73%), Positives = 91/108 (84%), Gaps = 1/108 (0%)
Frame = +3
Query: 240 LSGIKISTTHFQKIAPLPISAPLRPSLQP-VARRICPFTGKKSNKANKVSHSNHKTIRRQ 416
+ GI+IS P P++AP P++QP VARRICPFTGKK+N+ANKVS SNHKT + Q
Sbjct: 1 MGGIRISYN-----PPKPLTAPFTPAIQPLVARRICPFTGKKANRANKVSFSNHKTKKLQ 55
Query: 417 FVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
FVNLQYK++WWEAGKRYVKLRLSTKA+KTIEKNGLDAVAKKAGIDL K
Sbjct: 56 FVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 103
>ref|XP_004296393.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 150
Score = 157 bits (396), Expect = 5e-36
Identities = 82/112 (73%), Positives = 92/112 (82%), Gaps = 1/112 (0%)
Frame = +3
Query: 228 VASQLSGIKISTTHFQKIAPLPISAPLRPSLQP-VARRICPFTGKKSNKANKVSHSNHKT 404
V SQLSG+KIS ++ P PI P P LQP VARRICPFTGKK+NKANK+S S HKT
Sbjct: 39 VTSQLSGLKISHDMSSQL-PSPIFTPSLPGLQPIVARRICPFTGKKANKANKISFSAHKT 97
Query: 405 IRRQFVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
+ QFVNLQYK+IWWE GKR++KLRLSTKAIKTIEKNGL+AVAKKAGIDL K
Sbjct: 98 KKLQFVNLQYKRIWWEGGKRFLKLRLSTKAIKTIEKNGLEAVAKKAGIDLRK 149
>gb|AFK44373.1| unknown [Medicago truncatula]
Length = 146
Score = 156 bits (395), Expect = 7e-36
Identities = 78/109 (71%), Positives = 93/109 (85%)
Frame = +3
Query: 234 SQLSGIKISTTHFQKIAPLPISAPLRPSLQPVARRICPFTGKKSNKANKVSHSNHKTIRR 413
SQLSG+KIS+ K+ +++P +P VA+R+CPFTGKKSN+ANKVS SNHKT +
Sbjct: 40 SQLSGLKISSQTSLKLPTPIVASPFQPI---VAKRVCPFTGKKSNRANKVSFSNHKTKKL 96
Query: 414 QFVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
QFVNLQYK++WWEAGKR+VKLRLSTKA+KTIEKNGLDAVAKKAGIDLSK
Sbjct: 97 QFVNLQYKRVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLSK 145
>ref|NP_565765.1| 50S ribosomal protein L28 [Arabidopsis thaliana]
gi|21542433|sp|O22795.2|RK28_ARATH RecName: Full=50S
ribosomal protein L28, chloroplastic; AltName:
Full=CL28; Flags: Precursor gi|18252877|gb|AAL62365.1|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|20196843|gb|AAB80662.2|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|21387067|gb|AAM47937.1|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|21592705|gb|AAM64654.1|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|330253742|gb|AEC08836.1| 50S
ribosomal protein L28 [Arabidopsis thaliana]
Length = 143
Score = 156 bits (394), Expect = 9e-36
Identities = 82/112 (73%), Positives = 93/112 (83%), Gaps = 1/112 (0%)
Frame = +3
Query: 228 VASQLSGIKISTTHFQKIAPLPISAPLRPSLQP-VARRICPFTGKKSNKANKVSHSNHKT 404
+ SQLSG++IS T I IS P P +QP VARRICPFTGKK+N+ANKVS SNHKT
Sbjct: 33 LTSQLSGLRISYTPSDVINR--ISLPSFPGIQPIVARRICPFTGKKANRANKVSFSNHKT 90
Query: 405 IRRQFVNLQYKKIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 560
+ QFVNLQYK++WWEAGKR+VKLRLSTKA+KTIEKNGLDAVAKKAGIDL K
Sbjct: 91 KKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 142