BLASTX nr result

ID: Rehmannia22_contig00000995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00000995
         (645 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001078114.1| RING/U-box domain-containing protein [Arabid...    57   4e-06
ref|XP_003553548.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...    57   4e-06
ref|XP_003521387.1| PREDICTED: uncharacterized protein LOC100783...    57   4e-06
ref|NP_001030648.2| RING/U-box domain-containing protein [Arabid...    57   4e-06
gb|AAM65991.1| unknown [Arabidopsis thaliana]                          57   4e-06
ref|NP_566281.1| RING/U-box domain-containing protein [Arabidops...    57   4e-06
ref|XP_004974977.1| PREDICTED: uncharacterized protein LOC101774...    57   5e-06
ref|XP_004974976.1| PREDICTED: uncharacterized protein LOC101774...    57   5e-06

>ref|NP_001078114.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|222423602|dbj|BAH19770.1| AT3G06330 [Arabidopsis
           thaliana] gi|332640856|gb|AEE74377.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 363

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
 Frame = +3

Query: 159 QIPEEEAICDMCYSLVFLLQEDIDLLRTSCGCKSSL--IHESCAPESLKKEDGK-CSVCE 329
           +IPEEEA+C +C  +     E+ + L+  C CK  L  +HE+CA +    +  + C VC 
Sbjct: 210 EIPEEEAVCRICLDVC----EEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCR 265

Query: 330 QLIQCIPVTLSRTSTHN 380
           Q++Q +PVTL R  T N
Sbjct: 266 QVVQNLPVTLVRVPTPN 282


>ref|XP_003553548.1| PREDICTED: E3 ubiquitin-protein ligase MARCH7-like [Glycine max]
          Length = 450

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
 Frame = +3

Query: 132 ENGDGECIGQIPEEEAICDMCYSLVFLLQEDIDLLRTSCGCKS--SLIHESCAPESLK-K 302
           EN DGE    IPEEEA+C +C   +  L E  D L+  C CK   +L H+ CA +    K
Sbjct: 230 ENEDGE---DIPEEEAVCRIC---LIELGEGSDTLKMECSCKGELALAHQECAVKWFSIK 283

Query: 303 EDGKCSVCEQLIQCIPVTLSR 365
            +  C VC+Q +Q +PVTL R
Sbjct: 284 GNRTCDVCKQEVQNLPVTLLR 304


>ref|XP_003521387.1| PREDICTED: uncharacterized protein LOC100783117 [Glycine max]
          Length = 438

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
 Frame = +3

Query: 132 ENGDGECIGQIPEEEAICDMCYSLVFLLQEDIDLLRTSCGCKS--SLIHESCAPESLK-K 302
           EN DGE    IPEEEA+C +C   +  L E  D L+  C CK   +L H+ CA +    K
Sbjct: 218 ENEDGE---DIPEEEAVCRIC---LIELGEGSDTLKMECSCKGELALAHQECAVKWFSIK 271

Query: 303 EDGKCSVCEQLIQCIPVTLSR 365
            +  C VC+Q +Q +PVTL R
Sbjct: 272 GNRTCDVCKQEVQNLPVTLLR 292


>ref|NP_001030648.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|332640855|gb|AEE74376.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 257

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
 Frame = +3

Query: 159 QIPEEEAICDMCYSLVFLLQEDIDLLRTSCGCKSSL--IHESCAPESLKKEDGK-CSVCE 329
           +IPEEEA+C +C  +     E+ + L+  C CK  L  +HE+CA +    +  + C VC 
Sbjct: 41  EIPEEEAVCRICLDVC----EEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCR 96

Query: 330 QLIQCIPVTLSRTSTHN 380
           Q++Q +PVTL R  T N
Sbjct: 97  QVVQNLPVTLVRVPTPN 113


>gb|AAM65991.1| unknown [Arabidopsis thaliana]
          Length = 424

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
 Frame = +3

Query: 159 QIPEEEAICDMCYSLVFLLQEDIDLLRTSCGCKSSL--IHESCAPESLKKEDGK-CSVCE 329
           +IPEEEA+C +C  +     E+ + L+  C CK  L  +HE+CA +    +  + C VC 
Sbjct: 208 EIPEEEAVCRICLDVC----EEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCR 263

Query: 330 QLIQCIPVTLSRTSTHN 380
           Q++Q +PVTL R  T N
Sbjct: 264 QVVQNLPVTLVRVPTPN 280


>ref|NP_566281.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|6437553|gb|AAF08580.1|AC011623_13 unknown protein
           [Arabidopsis thaliana]
           gi|16226607|gb|AAL16212.1|AF428443_1 AT3g06330/F24P17_21
           [Arabidopsis thaliana] gi|22137116|gb|AAM91403.1|
           At3g06330/F24P17_21 [Arabidopsis thaliana]
           gi|70905077|gb|AAZ14064.1| At3g06330 [Arabidopsis
           thaliana] gi|332640854|gb|AEE74375.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 426

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
 Frame = +3

Query: 159 QIPEEEAICDMCYSLVFLLQEDIDLLRTSCGCKSSL--IHESCAPESLKKEDGK-CSVCE 329
           +IPEEEA+C +C  +     E+ + L+  C CK  L  +HE+CA +    +  + C VC 
Sbjct: 210 EIPEEEAVCRICLDVC----EEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCR 265

Query: 330 QLIQCIPVTLSRTSTHN 380
           Q++Q +PVTL R  T N
Sbjct: 266 QVVQNLPVTLVRVPTPN 282


>ref|XP_004974977.1| PREDICTED: uncharacterized protein LOC101774528 isoform X2 [Setaria
           italica]
          Length = 476

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
 Frame = +3

Query: 129 SENGDGECIGQ-IPEEEAICDMCYSLVFLLQEDIDLLRTSCGCKS--SLIHESCAPESLK 299
           SE+G GE  G+ IPEEEA+C +C   +  L E  D L+  C CK   +L H+ CA +   
Sbjct: 202 SESGVGEDDGEDIPEEEAVCRIC---MVELSEGNDTLKLECSCKGELALAHKDCAMKWFS 258

Query: 300 -KEDGKCSVCEQLIQCIPVTLSRTST 374
            K    C VC+Q +Q +PVTL R  +
Sbjct: 259 IKGTRTCEVCKQDVQNLPVTLLRVQS 284


>ref|XP_004974976.1| PREDICTED: uncharacterized protein LOC101774528 isoform X1 [Setaria
           italica]
          Length = 487

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
 Frame = +3

Query: 129 SENGDGECIGQ-IPEEEAICDMCYSLVFLLQEDIDLLRTSCGCKS--SLIHESCAPESLK 299
           SE+G GE  G+ IPEEEA+C +C   +  L E  D L+  C CK   +L H+ CA +   
Sbjct: 213 SESGVGEDDGEDIPEEEAVCRIC---MVELSEGNDTLKLECSCKGELALAHKDCAMKWFS 269

Query: 300 -KEDGKCSVCEQLIQCIPVTLSRTST 374
            K    C VC+Q +Q +PVTL R  +
Sbjct: 270 IKGTRTCEVCKQDVQNLPVTLLRVQS 295


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