BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia22_contig00000990
         (787 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar...   253   7e-65
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   251   2e-64
emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera]   247   4e-63
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]   245   1e-62
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...   244   2e-62
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi...   244   2e-62
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]         243   4e-62
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]          243   5e-62
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t...   243   7e-62
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi...   241   2e-61
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi...   241   2e-61
gb|AAD23679.1| putative retroelement pol polyprotein [Arabidopsi...   240   4e-61
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   237   4e-60
emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group]                236   5e-60
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   235   1e-59
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]   235   1e-59
gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposo...   235   1e-59
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           235   1e-59
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        234   2e-59
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...   234   3e-59

>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  253 bits (645), Expect = 7e-65
 Identities = 120/217 (55%), Positives = 163/217 (75%)
 Frame = +1

Query: 4    VPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLKF 183
            VPYS+A+GS+MY M+ TRPD+AY++  +SRYMS PG  HW AVKW++RYLK + +L L F
Sbjct: 1135 VPYSSAVGSIMYAMLGTRPDLAYAICLISRYMSKPGSMHWEAVKWVMRYLKGAQDLNLVF 1194

Query: 184  SKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYVA 363
            +K  +   + GY DSNYA D D R+S + YVFT+ G+ VSWK+ LQ +VA+STTE+EY+A
Sbjct: 1195 TKEKD-FTVTGYCDSNYAADLDRRRSISGYVFTIGGNTVSWKASLQPVVAMSTTEAEYIA 1253

Query: 364  VTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDI 543
            + EA KEA+W+KGL+ ++G  +  V ++ DSQS I L KN V+H+RTKHIDVRF+YIRD+
Sbjct: 1254 LAEAAKEAMWIKGLLQDMGMQQDKVKIWCDSQSAICLSKNSVYHERTKHIDVRFNYIRDV 1313

Query: 544  VAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 654
            V  G V++ KI +  NP D  TKC+PV+KF S L +L
Sbjct: 1314 VESGDVDVLKIHTSRNPVDALTKCIPVNKFKSALGVL 1350


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  251 bits (642), Expect = 2e-64
 Identities = 119/219 (54%), Positives = 165/219 (75%), Gaps = 1/219 (0%)
 Frame = +1

Query: 4    VPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLKF 183
            +PY++ +GSVMY MV +RPD+AY+VS +SRYMS PG  HW AVKWL +YL  + +LGL +
Sbjct: 986  IPYASMVGSVMYTMVCSRPDLAYAVSMISRYMSCPGKPHWQAVKWLFQYLAGTRSLGLVY 1045

Query: 184  SKSAE-GVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYV 360
              +++   +L+G+VD++YA + D RKS T YVFT  G  VSWK+ LQ +VALSTTE+EY+
Sbjct: 1046 GGNSQLETQLQGFVDADYAGNIDTRKSLTGYVFTXFGGAVSWKANLQSVVALSTTEAEYM 1105

Query: 361  AVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRD 540
            A+TEA+KEAIWLKG+  E+   +G VVV+ D+QS I L KN  FH+R+KHIDVR H++RD
Sbjct: 1106 AMTEAVKEAIWLKGITEELAMYRGKVVVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRD 1165

Query: 541  IVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKILN 657
            I+A G + + K+ ++ NP+DM TK L V+KF  CL ++N
Sbjct: 1166 IIAAGEIGVGKVHTKDNPSDMLTKSLNVTKFKHCLNLIN 1204


>emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera]
          Length = 1842

 Score =  247 bits (630), Expect = 4e-63
 Identities = 123/219 (56%), Positives = 159/219 (72%), Gaps = 1/219 (0%)
 Frame = +1

Query: 1    NVPYSNAIGSVMYLMVSTRP-DIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGL 177
            NV  +   G +   ++ TRP DIA+S+S LSR+M+NPG  HW+ VKWLLRY++ S+ +GL
Sbjct: 1624 NVKTAILHGDLEEKILMTRPXDIAHSISVLSRFMANPGREHWNGVKWLLRYVRGSLGVGL 1683

Query: 178  KFSKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEY 357
            KF  S EG  + GYVD +YA D D R+STTSY+FTL G  V+WKSQLQ IVALST E EY
Sbjct: 1684 KFGVSKEGASIIGYVDLDYAGDLDKRRSTTSYIFTLFGGPVNWKSQLQSIVALSTXEVEY 1743

Query: 358  VAVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIR 537
            +  T+A+KE +WL+GL+ E+G L   V +FSDSQS IQLCKN VFH+RTKH++VR+H+IR
Sbjct: 1744 ITTTKAMKETLWLQGLVKELGVLNSVVEIFSDSQSTIQLCKNXVFHERTKHVNVRYHFIR 1803

Query: 538  DIVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 654
            +IV+   + LEKI    NP DM TK LPV KF   L ++
Sbjct: 1804 EIVSSRKMKLEKISLADNPIDMATKVLPVRKFXYYLDLV 1842


>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
          Length = 735

 Score =  245 bits (626), Expect = 1e-62
 Identities = 116/218 (53%), Positives = 161/218 (73%), Gaps = 1/218 (0%)
 Frame = +1

Query: 7    PYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLKFS 186
            PY++ +GSVMY MV +RPD+AY+VS + RYMS  G  HW AVKWL +YL  + +LGL + 
Sbjct: 514  PYASMVGSVMYTMVCSRPDLAYAVSMIRRYMSCLGKPHWQAVKWLFQYLAGTRSLGLVYG 573

Query: 187  KSAE-GVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYVA 363
             +++ G +L+G+VD++Y  + D RKS   YVFT+ G  VSWK+ LQ +VALS TE+EY+A
Sbjct: 574  GNSQLGTQLQGFVDADYPGNIDTRKSLIGYVFTVFGGAVSWKANLQSVVALSATEAEYMA 633

Query: 364  VTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDI 543
            +TE +KE IWLKG+I E+   KG VVV+ D+QS I L KN  FH+R+KHIDVR H++RDI
Sbjct: 634  MTEVVKEVIWLKGIIEELAMYKGKVVVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRDI 693

Query: 544  VAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKILN 657
            +A G + + K+P++ NP+DM TK L V+KF  CL ++N
Sbjct: 694  IAVGEIGVGKVPTKDNPSDMLTKSLNVTKFKHCLNLIN 731


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score =  244 bits (624), Expect = 2e-62
 Identities = 118/217 (54%), Positives = 160/217 (73%)
 Frame = +1

Query: 4    VPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLKF 183
            VPY NAIGS+MY M+ +RPD+AY V  +SR+MS P   HW AVKW++RY+K + +  L+F
Sbjct: 1122 VPYPNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKPSKEHWQAVKWVMRYMKGTQDTCLRF 1181

Query: 184  SKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYVA 363
             K  +  +++GY DS+YA D D R+S T +VFT  G+ +SWKS LQ +VALSTTE+EY+A
Sbjct: 1182 KKD-DKFEIRGYCDSDYATDLDRRRSITGFVFTAGGNTISWKSGLQRVVALSTTEAEYMA 1240

Query: 364  VTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDI 543
            + EA+KEAIWL+GL +E+GF +  V V  DSQS I L KN V H+RTKHIDVR+H+IR+ 
Sbjct: 1241 LAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAIALSKNSVHHERTKHIDVRYHFIREK 1300

Query: 544  VAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 654
            +A G + + KI + +NPAD+ TK +PVSK    LK+L
Sbjct: 1301 IADGEIQVVKISTTWNPADIFTKTVPVSKLQEALKLL 1337


>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  244 bits (624), Expect = 2e-62
 Identities = 117/218 (53%), Positives = 163/218 (74%)
 Frame = +1

Query: 1    NVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLK 180
            ++PYS+A+GS+MY M+ TRPD+AY V  +SRYMS P   HW  VKW+LRY+K S+   L+
Sbjct: 1112 SIPYSSAVGSIMYAMIGTRPDLAYPVGIISRYMSQPAREHWLGVKWVLRYIKGSLGTKLQ 1171

Query: 181  FSKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYV 360
            + +S++  K+ GY D+++A  +D R+S T  VFTL GS +SWKS  Q +VALSTTE+EY+
Sbjct: 1172 YKRSSD-FKVVGYCDADHAACKDRRRSITGLVFTLGGSTISWKSGQQRVVALSTTEAEYM 1230

Query: 361  AVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRD 540
            ++TEA+KEA+W+KGL+ E G+ +  V +F DSQS I L KN V H+RTKHIDVR+ YIRD
Sbjct: 1231 SLTEAVKEAVWMKGLLKEFGYEQKSVEIFCDSQSAIALSKNNVHHERTKHIDVRYQYIRD 1290

Query: 541  IVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 654
            I+A G  ++ KI +E NPAD+ TK +PV+KF + L +L
Sbjct: 1291 IIANGDGDVVKIDTEKNPADIFTKIVPVNKFQAALTLL 1328


>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1363

 Score =  243 bits (621), Expect = 4e-62
 Identities = 117/218 (53%), Positives = 162/218 (74%)
 Frame = +1

Query: 1    NVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLK 180
            +VPYS+A+GS+MY M+ TRPD+AY V  +SR+MS P   HW  VKW+LRY+K +V+  L 
Sbjct: 1142 SVPYSSAVGSIMYAMIGTRPDLAYPVGVVSRFMSQPAKEHWLGVKWVLRYIKGTVDTRLC 1201

Query: 181  FSKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYV 360
            + ++++   + GY D++YA D D R+S T  VFTL G+ +SWKS LQ +VA S+TE EY+
Sbjct: 1202 YKRNSD-FSICGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRVVAQSSTECEYM 1260

Query: 361  AVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRD 540
            ++TEA+KEAIWLKGL+ + G+ + +V +F DSQS I L KN V H+RTKHIDV+FH+IR+
Sbjct: 1261 SLTEAVKEAIWLKGLLKDFGYEQKNVEIFCDSQSAIALSKNNVHHERTKHIDVKFHFIRE 1320

Query: 541  IVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 654
            I+A G V + KI +E NPAD+ TK LPV+KF + L  L
Sbjct: 1321 IIADGKVEVSKISTEKNPADIFTKVLPVNKFQTALDFL 1358


>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
          Length = 297

 Score =  243 bits (620), Expect = 5e-62
 Identities = 117/217 (53%), Positives = 163/217 (75%)
 Frame = +1

Query: 4   VPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLKF 183
           VPY++ +GS++Y MV TRPDI+ +VS +SRYM NPG + W AVKW+LRYL  +V++GL F
Sbjct: 76  VPYASVVGSLIYAMVCTRPDISQAVSMVSRYMHNPGKSQWLAVKWILRYLYGTVDVGLLF 135

Query: 184 SKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYVA 363
            K+  G +  GY DS++A D D ++ST+ YVFTL G  VSW+S LQ  +ALSTTE+EY+A
Sbjct: 136 KKNC-GQQCVGYCDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAEYIA 194

Query: 364 VTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDI 543
            TEA+KEAIWLKGL+ ++G ++ ++ VF D+QS I L KN  +H RTKHIDV++HY+R+I
Sbjct: 195 ATEAVKEAIWLKGLLGDLGVIQENIAVFCDNQSAIFLAKNQTYHARTKHIDVKYHYVREI 254

Query: 544 VAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 654
           +  G V L+KI ++ NP+DM TK +   KF  CLK++
Sbjct: 255 IEGGDVLLKKIDTKDNPSDMLTKVVSEVKFQHCLKLI 291


>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
            retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
            reverse transcriptase [Arabidopsis thaliana]
          Length = 587

 Score =  243 bits (619), Expect = 7e-62
 Identities = 115/217 (52%), Positives = 162/217 (74%)
 Frame = +1

Query: 4    VPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLKF 183
            VPY++A+GS+MY M+ TRPD+AY +  +SRYM+ PG  HW AVKW+LRY++ S +L L F
Sbjct: 366  VPYASAVGSIMYAMIGTRPDLAYDICLVSRYMARPGSIHWEAVKWILRYMRGSQDLNLVF 425

Query: 184  SKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYVA 363
            +K  E  ++ GY DS+YA D D R+S + YVFT+ G+ VSWK+ LQ + ALSTTE+E++A
Sbjct: 426  TKEKE-FRVTGYCDSDYAADLDRRRSVSGYVFTVGGNTVSWKANLQSVTALSTTEAEFMA 484

Query: 364  VTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDI 543
            +TEA KEA+W+KGL+ ++G  +  V ++ DSQS I L KN   H+RTKHIDVR+++IRD+
Sbjct: 485  LTEAAKEALWIKGLMKDLGLEQDKVTLWCDSQSAICLSKNSTHHERTKHIDVRYNFIRDV 544

Query: 544  VAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 654
            V  G V++ KI +  NPAD  TK +PV+KF S L++L
Sbjct: 545  VEAGDVDVLKIHTSRNPADALTKSIPVNKFQSALELL 581


>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score =  241 bits (615), Expect = 2e-61
 Identities = 116/217 (53%), Positives = 160/217 (73%)
 Frame = +1

Query: 4    VPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLKF 183
            VPY+N IGS+MY M+ TRPD+AYS+  +SR+MS P   HW AVKW+LRY++ +    L F
Sbjct: 1115 VPYANTIGSIMYSMIGTRPDLAYSLGVISRFMSKPLKDHWQAVKWVLRYMRGTEKKKLCF 1174

Query: 184  SKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYVA 363
             K  E   L+GY DS+Y ++ D R+S T YVFT+ G+ +SWKS+LQ +VA+S+TE+EY+A
Sbjct: 1175 RKQ-EDFLLRGYCDSDYGSNFDTRRSITGYVFTVGGNTISWKSKLQKVVAISSTEAEYMA 1233

Query: 364  VTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDI 543
            +TEA+KEA+WLKG  +E+G  +  V V SDSQS I L KN V H+RTKHID+R H+IRDI
Sbjct: 1234 LTEAVKEALWLKGFAAELGHSQDYVEVHSDSQSAITLAKNSVHHERTKHIDIRLHFIRDI 1293

Query: 544  VAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 654
            +  GL+ + KI +E NPA++ TK +P++KF   L +L
Sbjct: 1294 ICAGLIKVVKIATECNPANIFTKTVPLAKFEGALNML 1330


>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  241 bits (615), Expect = 2e-61
 Identities = 118/218 (54%), Positives = 160/218 (73%)
 Frame = +1

Query: 1    NVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLK 180
            +VPYS+A+GS+MY M+ TRPD+AY V  +SR+MS P   HW  VKW+LRY+K ++   L 
Sbjct: 1135 SVPYSSAVGSIMYAMLGTRPDLAYPVGIISRFMSQPIKEHWLGVKWVLRYIKGTLKTRLC 1194

Query: 181  FSKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYV 360
            + KS+    + GY D++YA D D R+S T  VFTL G+ +SWKS LQ +VA STTESEY+
Sbjct: 1195 YKKSSS-FSIVGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRVVAQSTTESEYM 1253

Query: 361  AVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRD 540
            ++TEA+KEAIWLKGL+ + G+ +  V +F DSQS I L KN V H+RTKHIDV++H+IR+
Sbjct: 1254 SLTEAVKEAIWLKGLLKDFGYEQKSVEIFCDSQSAIALSKNNVHHERTKHIDVKYHFIRE 1313

Query: 541  IVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 654
            I++ G V + KI +E NPAD+ TK L VSKF + L +L
Sbjct: 1314 IISDGTVEVLKISTEKNPADIFTKVLAVSKFQAALNLL 1351


>gb|AAD23679.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 838

 Score =  240 bits (613), Expect = 4e-61
 Identities = 115/218 (52%), Positives = 161/218 (73%)
 Frame = +1

Query: 1    NVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLK 180
            ++PY+NA+GS+MY M+ +RPD+A+ V  +SR+MS P + HW  VKW+LRY+K S++  L+
Sbjct: 617  SIPYANAVGSIMYSMIGSRPDLAHPVGVISRFMSKPLMNHWLGVKWVLRYIKGSIDSRLQ 676

Query: 181  FSKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYV 360
            + +  + V + GY DS+++ DRD  +STT Y FT+ G+ VSW+S LQ +VALS+TE+EY+
Sbjct: 677  YKREGDFV-VTGYCDSDHSGDRDRSRSTTGYTFTVGGNIVSWRSCLQPVVALSSTEAEYI 735

Query: 361  AVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRD 540
            A+TEA KEA WLK L++E+GF +G V +  DSQS I L KN V H+RTKHI  RFHYIRD
Sbjct: 736  ALTEAAKEAYWLKDLMNELGFKQGAVDIHCDSQSAIALAKNAVHHERTKHIQRRFHYIRD 795

Query: 541  IVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 654
             +  G V + KI +  NP+D+ TK +PV+KFLS LK L
Sbjct: 796  AITDGEVKVLKISTVHNPSDIFTKVVPVNKFLSALKKL 833


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  237 bits (604), Expect = 4e-60
 Identities = 112/217 (51%), Positives = 161/217 (74%)
 Frame = +1

Query: 4    VPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLKF 183
            VPYS+A+GS+MY MV +RPD++Y++S +SRYMSNPG  HW AV+W+ RYL+ +    LKF
Sbjct: 1115 VPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGTTYSCLKF 1174

Query: 184  SKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYVA 363
             ++ +G  L GYVDS+YA D D R+S T YVFT+    VSW++ LQ +VALSTTE+EY+A
Sbjct: 1175 GRTDKG--LIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMA 1232

Query: 364  VTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDI 543
            + EA KE IWLKGL +E+  ++  + +  DSQS I L K+ +FH+RTKHID+++H++RD+
Sbjct: 1233 ICEACKELIWLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDV 1292

Query: 544  VAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 654
            + +G + + KI +  NPADM TK +PV+KF  C  ++
Sbjct: 1293 IEEGKLKVCKISTHDNPADMMTKPIPVAKFELCSSLV 1329


>emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group]
          Length = 293

 Score =  236 bits (603), Expect = 5e-60
 Identities = 112/217 (51%), Positives = 162/217 (74%)
 Frame = +1

Query: 4   VPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLKF 183
           VPYS+A+GS+MY MV +RPD+++++S +SRYM+NPG  HW A+ W+ RYL+ + +  LKF
Sbjct: 75  VPYSSAVGSLMYAMVCSRPDLSHAMSLVSRYMTNPGKEHWKAIHWIFRYLRGTTDACLKF 134

Query: 184 SKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYVA 363
            ++ +G  L GYVDS++A D D R+S T YVFT+    VSWK+ LQ IVA STTE+EY+A
Sbjct: 135 GRTDKG--LVGYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQPIVAQSTTEAEYMA 192

Query: 364 VTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDI 543
           + EA KE++WLKGL +E+  +   + +F DSQS I L K+ +FH+RTKHID+++HY+RD+
Sbjct: 193 IAEACKESVWLKGLFAELCGVDSCINLFCDSQSAICLTKDQMFHERTKHIDIKYHYVRDV 252

Query: 544 VAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 654
           VA+G + + KI +  NPADM TK +PV+KF  C  ++
Sbjct: 253 VAQGKLKVCKISTHDNPADMMTKPVPVAKFELCSSLV 289


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  235 bits (600), Expect = 1e-59
 Identities = 111/217 (51%), Positives = 160/217 (73%)
 Frame = +1

Query: 4    VPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLKF 183
            VPYS+A+GS+MY MV +RPD++Y++S +SRYMSNPG  HW  V+W+ RYL+ +    LKF
Sbjct: 1115 VPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRVVQWIFRYLRGTTYSCLKF 1174

Query: 184  SKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYVA 363
             ++ +G  L GYVDS+YA D D R+S T YVFT+    VSW++ LQ +VALSTTE+EY+A
Sbjct: 1175 GRTDKG--LIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMA 1232

Query: 364  VTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDI 543
            + EA KE IWLKGL +E+  ++  + +  DSQS I L K+ +FH+RTKHID+++H++RD+
Sbjct: 1233 ICEACKELIWLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDV 1292

Query: 544  VAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 654
            + +G + + KI +  NPADM TK +PV+KF  C  ++
Sbjct: 1293 IEEGKLKVCKISTHDNPADMMTKPIPVAKFELCSSLV 1329


>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
          Length = 777

 Score =  235 bits (600), Expect = 1e-59
 Identities = 117/218 (53%), Positives = 149/218 (68%)
 Frame = +1

Query: 1    NVPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLK 180
            +VPY+NAI ++M+                   M+NPG  HW+ V WLLRY++ S+ +GLK
Sbjct: 569  SVPYANAIRALMF-------------------MANPGREHWNGVTWLLRYVRGSLGVGLK 609

Query: 181  FSKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYV 360
            F  S EG  + GYVDS+Y  D D R STT Y+FTL G  VSWKSQLQ IVALSTT++EY+
Sbjct: 610  FGSSKEGDGITGYVDSDYVGDLDKRXSTTGYIFTLFGGPVSWKSQLQSIVALSTTKAEYI 669

Query: 361  AVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRD 540
            A TEA+KEA+WL+GL+ E+  L   V +F DSQS IQLC NP FH RTKHIDVR+H+IR+
Sbjct: 670  AATEAMKEALWLQGLVKELXVLNSVVEIFLDSQSAIQLCNNPXFHXRTKHIDVRYHFIRE 729

Query: 541  IVAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 654
             ++ G + LEKI    NPADM TK LPV+KF   L ++
Sbjct: 730  TISSGAMKLEKISXVDNPADMATKVLPVTKFKYSLDLV 767


>gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
            notabilis]
          Length = 1822

 Score =  235 bits (599), Expect = 1e-59
 Identities = 112/204 (54%), Positives = 157/204 (76%), Gaps = 1/204 (0%)
 Frame = +1

Query: 4    VPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLKF 183
            +PY++A+ S+MY MV TR ++AYS S +SR+MSN G  HW AVKW+    + + N+GL +
Sbjct: 462  IPYASAVDSLMYAMVCTRLNLAYSASLVSRFMSNSGKEHWEAVKWV----QGASNVGLLY 517

Query: 184  SKSA-EGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYV 360
             +   +G KL+GYVD+++A D D R+S + Y+FTL G  VSWK+QLQ +VALSTTE+EY+
Sbjct: 518  KRMRNDGEKLRGYVDADFAGDLDKRRSLSGYIFTLFGCTVSWKAQLQLVVALSTTEAEYI 577

Query: 361  AVTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRD 540
            A TE +KEA+WLKGLI E+G ++ +V VF D+QS I L KN +F+DRTKHID++ H+IRD
Sbjct: 578  AATEGVKEAMWLKGLIGELGIVQDEVEVFCDNQSSILLTKNQMFYDRTKHIDIKLHFIRD 637

Query: 541  IVAKGLVNLEKIPSEFNPADMGTK 612
            I+++G V LEKI ++ NPADMGT+
Sbjct: 638  IISRGTVTLEKIHTDDNPADMGTR 661


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  235 bits (599), Expect = 1e-59
 Identities = 111/217 (51%), Positives = 161/217 (74%)
 Frame = +1

Query: 4    VPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLKF 183
            VPYS+A+GS+MY MV +RPD++Y++S +SRYMSNPG  HW A++W+ RYL+ +    LKF
Sbjct: 1117 VPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRALQWIFRYLRGTTYSCLKF 1176

Query: 184  SKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYVA 363
             ++ +G  L GYVDS+YA D D R+S T YVFT+    VSW++ LQ +VALSTTE+EY+A
Sbjct: 1177 GRTDKG--LIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMA 1234

Query: 364  VTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDI 543
            + EA KE IWLKGL +E+  ++  + +  DSQS I L K+ +FH+RTKHID+++H++RD+
Sbjct: 1235 ICEACKELIWLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDV 1294

Query: 544  VAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 654
            + +G + + KI +  NPADM TK +PV+KF  C  ++
Sbjct: 1295 IEEGKLKVCKICTHDNPADMMTKPIPVAKFELCSSLV 1331


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  234 bits (598), Expect = 2e-59
 Identities = 113/217 (52%), Positives = 161/217 (74%)
 Frame = +1

Query: 4    VPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLKF 183
            VPYS+A+GS+MY M+ +RPD+++++S +SRYM+NPG  HW  V+W+ RYL  + +  L+F
Sbjct: 963  VPYSSAVGSLMYAMICSRPDLSHALSVVSRYMANPGKEHWKDVQWIFRYLHGTSSACLQF 1022

Query: 184  SKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYVA 363
             +S +G  L GYVDS++A D D R+S T YVFT+ G  VSWK+ LQ  VALSTTE+EY+A
Sbjct: 1023 GRSRDG--LVGYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQATVALSTTEAEYMA 1080

Query: 364  VTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDI 543
            ++EA KEAIWL+GL +E+  +   + +F DSQS I L K+ +FH+RTKHIDVR+H+IR +
Sbjct: 1081 ISEACKEAIWLRGLYTELCGVTSCINIFCDSQSAICLTKDQMFHERTKHIDVRYHFIRGV 1140

Query: 544  VAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 654
            +A+G V + KI +  NPADM TK +P +KF  C  ++
Sbjct: 1141 IAEGDVKVCKISTHDNPADMMTKPVPATKFELCSSLV 1177


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1175

 Score =  234 bits (596), Expect = 3e-59
 Identities = 109/217 (50%), Positives = 161/217 (74%)
 Frame = +1

Query: 4    VPYSNAIGSVMYLMVSTRPDIAYSVSCLSRYMSNPGITHWSAVKWLLRYLKHSVNLGLKF 183
            VPYS+ +GS+MY MV +R D+++++S +SRYM+NPG  HW A++W+ RYL+ + N  LKF
Sbjct: 957  VPYSSVVGSLMYAMVCSRLDLSHAMSLVSRYMANPGKEHWKAIQWIFRYLRDTANACLKF 1016

Query: 184  SKSAEGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHIVALSTTESEYVA 363
             ++ +G  L GYVDS++A D D R+S T YVFT+    VSWK+ L+H+VA STTE+EY+A
Sbjct: 1017 GRTNKG--LIGYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLRHVVAQSTTEAEYMA 1074

Query: 364  VTEALKEAIWLKGLISEIGFLKGDVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDI 543
            + EA KE++WLKGL +E+  +   + +F DSQS I L K+ +FH+RTKHID+++HY+RD+
Sbjct: 1075 IAEACKESVWLKGLFAELCGVYSCINLFCDSQSAICLTKDQMFHERTKHIDIKYHYVRDV 1134

Query: 544  VAKGLVNLEKIPSEFNPADMGTKCLPVSKFLSCLKIL 654
            VA+G + + KI +  NP DM TK +PV+KF  C  ++
Sbjct: 1135 VAQGKLKVCKISTHDNPVDMMTKHVPVAKFELCSSLV 1171