BLASTX nr result
ID: Rehmannia22_contig00000902
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00000902
(1096 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK29467.1| polyprotein-like [Solanum chilense] 178 4e-42
gb|AAD23679.1| putative retroelement pol polyprotein [Arabidopsi... 171 5e-40
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 170 8e-40
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 164 6e-38
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 162 3e-37
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera] 160 6e-37
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 156 1e-35
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 156 2e-35
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 154 6e-35
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera] 150 1e-33
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 144 8e-32
dbj|BAA97536.1| retroelement pol polyprotein-like [Arabidopsis t... 142 3e-31
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi... 142 3e-31
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera] 139 3e-30
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 138 3e-30
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 138 3e-30
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 138 4e-30
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 137 8e-30
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 136 2e-29
emb|CAN71583.1| hypothetical protein VITISV_043292 [Vitis vinifera] 136 2e-29
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 178 bits (451), Expect = 4e-42
Identities = 125/384 (32%), Positives = 178/384 (46%), Gaps = 21/384 (5%)
Frame = -3
Query: 1091 EIDEYAYSSIILNLSDSVLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXLD 912
E+DE A S+I L+L+D V+ + SA +W KLE LY +L + +D
Sbjct: 55 ELDEKAASAIRLHLTDDVVNNIVDEESACGIWTKLENLYMSKTLTNKLYLKKQLYTLHMD 114
Query: 911 LNKEIDENLDVFTKLIQDIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKYGRDTITLD 732
+L+V LI + G K ++ IVLLN++P SY + + I +G+D+I L
Sbjct: 115 EGTNFLSHLNVLNGLITQLANLGVKIEEEDKRIVLLNSLPSSYDTLSTTILHGKDSIQLK 174
Query: 731 TVVNGLKSKELDLKVNRS----------------SXXXXXXXXXXXXXXXXXXXXXXKCY 600
V + L E K + S CY
Sbjct: 175 DVTSALLLNEKMRKKPENHGQVFITESRGRSYQRSSSNYGRSGARGKSKVRSKSKARNCY 234
Query: 599 ECGQSGHYIRECPN-KRGN-QNFKQNEHANMASTSENVPDVFMVY---ENCADVNSVRSN 435
C Q GH+ R+CPN KRG ++ Q N A+ +N DV ++ E C +
Sbjct: 235 NCDQPGHFKRDCPNPKRGKGESSGQKNDDNTAAMVQNNDDVVLLINEEEECMHLAGT--- 291
Query: 434 SVCETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYV 255
E+EW+VD+ ++H TP + LF Y +G+V + N I GIGD+C K + G
Sbjct: 292 ---ESEWVVDTAASYHATPVRDLFCRYVAGDYGNVKMGNTSYSKIAGIGDICFKTNVGCT 348
Query: 254 LTLKNVRHVPDLCSNLISCASLEDDGLEGKWGKGLMKILKGNLVIFKAVKRRNLYVCTAE 75
L LK+VRHVPDL NLIS +L+ DG E + ++ KG LVI K V R LY AE
Sbjct: 349 LVLKDVRHVPDLRMNLISGIALDQDGYENYFANQKWRLTKGALVIAKGVARGTLYRTNAE 408
Query: 74 LESSLQNSVNAVCGSENDKTDLWH 3
+ Q +NA E + DLWH
Sbjct: 409 I---CQGELNA--AHEENSADLWH 427
>gb|AAD23679.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 838
Score = 171 bits (433), Expect = 5e-40
Identities = 111/379 (29%), Positives = 185/379 (48%), Gaps = 21/379 (5%)
Frame = -3
Query: 1076 AYSSIILNLSDSVLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXLDLNKEI 897
A S++IL+L + VLRKV K +A + L++L+ SLP+ + + I
Sbjct: 71 ARSTVILSLGNHVLRKVIKEKTAAGMIRVLDKLFMAKSLPNRIYLKQRLYGYKMSDSMTI 130
Query: 896 DENLDVFTKLIQDIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKYGRDTITLDTVVNG 717
+EN++ F KLI D++ D+ IVLL ++P+ + +K +KYG+ T+ LD +
Sbjct: 131 EENVNDFFKLISDLENVKVSVPDEDQAIVLLMSLPKQFDQLKDTLKYGKTTLALDEITGA 190
Query: 716 LKSKELDLKVNRS----------------SXXXXXXXXXXXXXXXXXXXXXXKCYECGQS 585
++SK L+L + S C+ CG+
Sbjct: 191 IRSKVLELGASGKMLKNSSDALFVQDRGRSEKRDKSSERNKSQSRSKSREKKVCWVCGKE 250
Query: 584 GHYIREC-----PNKRGNQNFKQNEHANMASTSENVPDVFMVYENCADVNSVRSNSVCET 420
GH+ ++C NK+GN N ++ E +N+ + + + + E+ AD N +
Sbjct: 251 GHFKKQCYVWKEKNKKGN-NSEKGESSNVIGQAADAAALAVREESNAD------NQEVDN 303
Query: 419 EWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKN 240
EW++D+GC+FHMTP + F + E G V +ANQ I GIG + ++ D + LKN
Sbjct: 304 EWIMDTGCSFHMTPRRDWFVEFDESQTGRVKMANQTYSEIKGIGSIRIQNDDNTTVLLKN 363
Query: 239 VRHVPDLCSNLISCASLEDDGLEGKWGKGLMKILKGNLVIFKAVKRRNLYVCTAELESSL 60
VR+VP + NLIS +LED G + G +K++KG + + K K LY+ + +
Sbjct: 364 VRYVPSMSKNLISMGTLEDQGCWFQSKAGTLKVVKGCMTLLKGKKVGTLYLLQGVVVTGN 423
Query: 59 QNSVNAVCGSENDKTDLWH 3
N+V S D++ +WH
Sbjct: 424 ANAVT----SSKDESKIWH 438
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 170 bits (431), Expect = 8e-40
Identities = 119/384 (30%), Positives = 177/384 (46%), Gaps = 21/384 (5%)
Frame = -3
Query: 1091 EIDEYAYSSIILNLSDSVLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXLD 912
++DE A S+I L+LSD V+ + +A+ +W +LE LY +L + +
Sbjct: 54 DLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMS 113
Query: 911 LNKEIDENLDVFTKLIQDIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKYGRDTITLD 732
+L+VF LI + G K ++ I+LLN++P SY ++ + I +G+ TI L
Sbjct: 114 EGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELK 173
Query: 731 TVVNGLKSKELDLKVNRS----------------SXXXXXXXXXXXXXXXXXXXXXXKCY 600
V + L E K + S CY
Sbjct: 174 DVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCY 233
Query: 599 ECGQSGHYIRECPNKR---GNQNFKQNEH--ANMASTSENVPDVFMVYENCADVNSVRSN 435
C Q GH+ R+CPN R G + ++N+ A M ++NV E C ++
Sbjct: 234 NCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGP--- 290
Query: 434 SVCETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYV 255
E+EW+VD+ + H TP + LF Y G+V + N I GIGD+C+K + G
Sbjct: 291 ---ESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCT 347
Query: 254 LTLKNVRHVPDLCSNLISCASLEDDGLEGKWGKGLMKILKGNLVIFKAVKRRNLYVCTAE 75
L LK+VRHVPDL NLIS +L+ DG E + ++ KG+LVI K V R LY AE
Sbjct: 348 LVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAE 407
Query: 74 LESSLQNSVNAVCGSENDKTDLWH 3
+ Q +NA + DLWH
Sbjct: 408 I---CQGELNA--AQDEISVDLWH 426
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 164 bits (415), Expect = 6e-38
Identities = 109/377 (28%), Positives = 175/377 (46%), Gaps = 19/377 (5%)
Frame = -3
Query: 1076 AYSSIILNLSDSVLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXLDLNKEI 897
A + I LN++D VLRK+ +A WE L+ L+ SLP + NK+I
Sbjct: 49 AKNVIFLNVADKVLRKIELCKTAAEAWETLDRLFMIRSLPHRVYTQLSFYTFKMQENKKI 108
Query: 896 DENLDVFTKLIQDIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKYG--RDTITLDTVV 723
DEN+D F K++ D+ D+ I+LL+++P Y + +KY R+ + LD V+
Sbjct: 109 DENIDDFLKIVADLNHLQIDVTDEVQAILLLSSLPARYDGLVETMKYSNSREKLRLDDVM 168
Query: 722 NGLKSKELDLKVNR-------------SSXXXXXXXXXXXXXXXXXXXXXXKCYECGQSG 582
+ KE +L N C+ CG+ G
Sbjct: 169 VAARDKERELSQNNRPVVEGHFARGRPDGKNNNQGNKGKNRSRSKSADGKRVCWICGKEG 228
Query: 581 HYIREC----PNKRGNQNFKQNEHANMASTSENVPDVFMVYENCADVNSVRSNSVCETEW 414
H+ ++C + Q N +++A ++E ++ D V ++S+ EW
Sbjct: 229 HFKKQCYKWIERNKSKQQGSDNGESSLAKSTEAFNPAMVLL--ATDETLVVTDSIAN-EW 285
Query: 413 LVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVR 234
++D+GC+FHMTP K F ++KE+ G V + N + GIG + ++ G + L +VR
Sbjct: 286 VLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGSIKIRNSDGSQVILTDVR 345
Query: 233 HVPDLCSNLISCASLEDDGLEGKWGKGLMKILKGNLVIFKAVKRRNLYVCTAELESSLQN 54
++P++ NLIS +LED G K G++KI+KG I K KR LY+ E +
Sbjct: 346 YMPNMTRNLISLGTLEDRGCWFKSQDGILKIVKGCSTILKGQKRDTLYILDGVTEEGESH 405
Query: 53 SVNAVCGSENDKTDLWH 3
S V D+T LWH
Sbjct: 406 SSAEV----KDETALWH 418
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 162 bits (409), Expect = 3e-37
Identities = 98/274 (35%), Positives = 141/274 (51%)
Frame = -3
Query: 908 NKEIDENLDVFTKLIQDIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKYGRDTITLDT 729
+K ID+ LD F KL+ D++ K D+ I+LLN++P+S K +KYG+D IT D
Sbjct: 27 SKPIDDALDEFNKLVLDLESLDIKVEDEDKAIILLNSLPKSLKHFKETLKYGKDDITFDD 86
Query: 728 VVNGLKSKELDLKVNRSSXXXXXXXXXXXXXXXXXXXXXXKCYECGQSGHYIRECPNKRG 549
V N L +K LD+K S KCY C + G R CP+++
Sbjct: 87 VQNALNAKVLDMK--SSDKTNGGKSRSKSKSKGKKDYRNVKCYHCNKIGQIRRICPDRQ- 143
Query: 548 NQNFKQNEHANMASTSENVPDVFMVYENCADVNSVRSNSVCETEWLVDSGCTFHMTPFKR 369
Q E ++ + D + + +V ++R N E EW++DSGCT+HM P +
Sbjct: 144 -----QEEKTQAQGSAAIIDDGY----DSTEVLTIRLNPNHE-EWVLDSGCTYHMCPRRD 193
Query: 368 LFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRHVPDLCSNLISCASL 189
FS+Y+EV G + L N CN+VGIG + + G TLK VRHVPDL NLIS +L
Sbjct: 194 WFSSYQEVNGGKLLLGNNMSCNVVGIGTMAINMHDGKTRTLKEVRHVPDLKRNLISLGTL 253
Query: 188 EDDGLEGKWGKGLMKILKGNLVIFKAVKRRNLYV 87
+ G K G + I K +V+ K KR L++
Sbjct: 254 DKSGYNFKAKNGKLTISKXAMVVMKGQKRNGLHI 287
>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
Length = 894
Score = 160 bits (406), Expect = 6e-37
Identities = 109/342 (31%), Positives = 167/342 (48%), Gaps = 15/342 (4%)
Frame = -3
Query: 1094 VEIDEYAYSSIILNLSDSVLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXL 915
+E+ E A+ +IIL+L D+ LR+V K SA L KLE LY SL + +
Sbjct: 53 IELLEKAHGAIILSLGDTXLREVAKAKSAAKLLLKLESLYMTKSLANRLHKXIKLYTFKM 112
Query: 914 DLNKEIDENLDVFTKLIQDIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKYGRDTITL 735
+ I+E+LD F K+I D+K ++ I+LL ++ SY+++K AI YGRD +T
Sbjct: 113 TPSMSIEEHLDHFNKIILDLKNIDIAVSNEDKAILLLTSLDASYTNMKEAIMYGRDILTF 172
Query: 734 DTVVNGLKSKELD------------LKVNRSSXXXXXXXXXXXXXXXXXXXXXXKCYECG 591
D V + L ++EL L + S KC+ C
Sbjct: 173 DEVQSILHARELHKQEESKEELGEGLNIRGKSKKREKKKGNNSKSRSKSKTKKFKCFICH 232
Query: 590 QSGHYIRECPNKRGNQNFKQNEHANMASTSENVPDVFMV---YENCADVNSVRSNSVCET 420
+ GH+ ++CP+ R N K + N D M+ Y+N +N +S
Sbjct: 233 KEGHFKKDCPDMRQNTXKK----------TMNEGDATMILDGYDNAGVLNVAEVDS--GK 280
Query: 419 EWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKN 240
EW++DSGC+FHM P K F ++KE G V L N K C I+G G V +K G L++
Sbjct: 281 EWILDSGCSFHMCPIKAWFEDFKEANGGHVLLGNNKHCKILGTGTVKIKHYDGIERVLED 340
Query: 239 VRHVPDLCSNLISCASLEDDGLEGKWGKGLMKILKGNLVIFK 114
+R++P+L NLIS L+ G K +++ +G+L + K
Sbjct: 341 IRYIPELKMNLISLGMLDKLGYTFKSEPNSLRVARGSLTVMK 382
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 156 bits (395), Expect = 1e-35
Identities = 119/387 (30%), Positives = 181/387 (46%), Gaps = 24/387 (6%)
Frame = -3
Query: 1091 EIDEYAYSSIILNLSDSVLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXLD 912
+I A+S++IL+L DS+LR++ + +A +W K+E L + SL +
Sbjct: 56 QIQNRAHSTLILSLGDSILREISEEKTALGIWNKVETLCMKKSLAHRLFLKKRLYTFSMR 115
Query: 911 LNKEIDENLDVFTKLIQDIKLTGDKNI---DDYTPIVLLNAIPESYSDVKSAIKYGRDTI 741
I +++D F K+I D++ G +N+ D+ LL+++P+SY + YGR T+
Sbjct: 116 EGVTIQDHIDTFNKIILDLE--GVENVKICDEDKAFFLLSSLPKSYEGFVDTMLYGRTTL 173
Query: 740 TLDTVVNGLKSKELDL-----------------KVNRSSXXXXXXXXXXXXXXXXXXXXX 612
TL+ V L SKE+ K
Sbjct: 174 TLEDVKASLSSKEIQKNCELETSNGEGLMARTEKKKDQKNKNQGKGHGKNQETADKKKKK 233
Query: 611 XKCYECGQSGHYIRECPNKRGNQNFKQNEHANMASTSENVPDVFMVYENCADVNSVRSNS 432
KC+ C + GHYIR+C K+ ++ Q + + A S++ D + AD+ V SNS
Sbjct: 234 RKCFYCRKEGHYIRDCFEKKKKES--QEKSGDAAVASDDGSDGYQ----SADL-LVASNS 286
Query: 431 VCETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGI----GDVCLKFDS 264
+ +W++DSGC+FH+ P K LF Y+ V G V + N CNIVGI CL
Sbjct: 287 NTKGQWVIDSGCSFHLCPEKTLFYKYEAVDGGRVLMGNNNVCNIVGIWFCKRSRCL---M 343
Query: 263 GYVLTLKNVRHVPDLCSNLISCASLEDDGLEGKWGKGLMKILKGNLVIFKAVKRRNLYVC 84
+ +L VRH P L NLIS L+ G K G +++ KG ++ K V LYV
Sbjct: 344 ELLRSLHEVRHAPRLKRNLISLGMLDSLGYFFKSRIGGLEVRKGTEIVMKGVNENGLYVL 403
Query: 83 TAELESSLQNSVNAVCGSENDKTDLWH 3
+Q V+AV SE D+T LWH
Sbjct: 404 QGS-SVPVQEGVSAV--SEEDRTKLWH 427
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 156 bits (394), Expect = 2e-35
Identities = 110/386 (28%), Positives = 184/386 (47%), Gaps = 32/386 (8%)
Frame = -3
Query: 1064 IILNLSDSVLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXLDLNKEIDENL 885
I L+LS+++L++V K +A ALW KLE++ L S L ++ + ++L
Sbjct: 4 IHLHLSNNILQEVLKEKTATALWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDESVMDHL 63
Query: 884 DVFTKLIQDIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKYGRDTITLDTVVNGLKSK 705
F +++ D++ K ++ ++LL ++P SY++ + I Y RDT+TL V + L +K
Sbjct: 64 STFKEIVADLESMEIKYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLQEVYDALHAK 123
Query: 704 ELDLKV---------------------NRSSXXXXXXXXXXXXXXXXXXXXXXKCYECGQ 588
E K+ + C C +
Sbjct: 124 EKMKKMVPSEGSNSQPESLVVRGRQQEKNTDNKSRDKSSSGYRGRSKSRGRYKSCKYCKR 183
Query: 587 SGHYIREC---PNK---RGNQN--FKQNEHANMASTSENVPD--VFMVYENCADVNSVRS 438
GH I +C NK +GN KQ E A ++N PD + + Y C +
Sbjct: 184 GGHDISDCWKLQNKEKHKGNYKPKGKQEEQGKAAVATDNKPDAELLVAYAGCVQTSD--- 240
Query: 437 NSVCETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGY 258
EWL+D+GCT+HM P + F+ Y+ V G+V + + C + G+G + +K G
Sbjct: 241 ------EWLLDTGCTYHMCPNRDWFTTYEPVQGGNVLMGDNTPCKVAGVGTIQIKMFDGC 294
Query: 257 VLTLKNVRHVPDLCSNLISCASLEDDGLEGKWGKGLMKILKGNLVIFKA-VKRRNLYVCT 81
+ TL +VRH+P L NLIS ++L+ G G G++K+ KG+LV+ KA +K +LY
Sbjct: 295 IRTLSDVRHIPSLKRNLISLSTLDRKGYRYSGGDGILKVTKGSLVVMKADIKNADLYHLQ 354
Query: 80 AELESSLQNSVNAVCGSENDKTDLWH 3
+++ +V AV S ++ +DLWH
Sbjct: 355 G---TTIVGNVAAVTDSLSN-SDLWH 376
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 154 bits (389), Expect = 6e-35
Identities = 110/378 (29%), Positives = 180/378 (47%), Gaps = 16/378 (4%)
Frame = -3
Query: 1088 IDEYAYSSIILNLSDSVLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXLDL 909
++E A+S+I+L L+D V+ +V +A LW KLE LY SL + +
Sbjct: 52 LEEKAHSTIMLCLADDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAE 111
Query: 908 NKEIDENLDVFTKLIQDIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKYGRDTITLDT 729
++ E+L+ L+ +++ K D+ ++LL ++P S+ + + G+DT++L+
Sbjct: 112 GTQLREHLEQLNTLLLELRNIDVKIEDEDAALILLVSLPMSFENFVQSFIVGKDTVSLEE 171
Query: 728 VVNGLKSKELDLKVN------------RSSXXXXXXXXXXXXXXXXXXXXXXKCYECGQS 585
V + L S+EL K N SS C C +
Sbjct: 172 VRSALHSRELRHKANGTSTDIQPSGLFTSSRKGRKNGGKKNKPMSKGAKPDDVCNYCKEK 231
Query: 584 GHYIRECPNKRGNQNFKQNEHANMASTSENVP-DVFMVYENCADVNSVRSNSVCETEWLV 408
GH+ +CP K+ Q+ KQ+ A +A N D+ +V AD ++ S+ W++
Sbjct: 232 GHWKFDCPKKK-KQSEKQSVSAAVAEEDTNSEEDIALV----ADEHTHHSDV-----WVL 281
Query: 407 DSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRHV 228
DSG ++H+ P + F+ Y++V GS+S+AN C +VG G + ++ G TL VRHV
Sbjct: 282 DSGASYHICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHV 341
Query: 227 PDLCSNLISCASLEDDGLEGKWGKGLMKILKGNLVIFKAVKRRNLYVCTAELESSLQNSV 48
P + NLIS + L+ G G++++ KG+ +I K V R LY L+ S
Sbjct: 342 PLMTKNLISLSLLDSKGFSWSGKDGVLRVWKGSNLILKGVMRGTLYF----LQGSTVTGS 397
Query: 47 NAVCGSE---NDKTDLWH 3
V SE D T LWH
Sbjct: 398 AHVASSEFHQKDMTKLWH 415
>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
Length = 344
Score = 150 bits (378), Expect = 1e-33
Identities = 100/345 (28%), Positives = 160/345 (46%), Gaps = 14/345 (4%)
Frame = -3
Query: 1082 EYAYSSIILNLSDSVLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXLDLNK 903
E A+ +I+L L + VLR++ + LW KLE L+ SL + + +
Sbjct: 11 EKAHRAILLCLGNKVLREIAEEDITAKLWLKLESLHMTKSLKNRLYLKKRLHTLQMKESM 70
Query: 902 EIDENLDVFTKLIQDIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKYGRDTITLDTVV 723
I ++ + F K I D++ K + I L+ ++P SY + YGR T+ + V
Sbjct: 71 SIKDHFNEFNKTIXDLRNIDVKVNYEDQAIFLMCSLPNSYEHFVDIMMYGRGTLFIKDVR 130
Query: 722 NGLKSKELDLKVNRSSXXXXXXXXXXXXXXXXXXXXXXK-----------CYECGQSGHY 576
L S+EL V +S C++C + GHY
Sbjct: 131 VALNSRELKKMVFKSRKYDSGEGLVARGRTRKKNNGRRGRSRSKSRGNNKCFKCKKEGHY 190
Query: 575 IRECPNKRGNQNFKQNEH---ANMASTSENVPDVFMVYENCADVNSVRSNSVCETEWLVD 405
++ P+++G +N K+N + A A + N DV +V +D EW++D
Sbjct: 191 VKNXPDRKGKEN-KRNYNSGDATFAKENSNTTDVLLVXVTNSD-----------DEWILD 238
Query: 404 SGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRHVP 225
SGC++HM+P FS Y+ + G V + N+ C +VGI + +K G + TL NVRHVP
Sbjct: 239 SGCSYHMSPNGDWFSTYQPIDGGKVLMGNKVACKVVGIHXIQIKMHGGIIRTLTNVRHVP 298
Query: 224 DLCSNLISCASLEDDGLEGKWGKGLMKILKGNLVIFKAVKRRNLY 90
L NLI +L+ +G K G G++++ KG LV+ K LY
Sbjct: 299 KLNKNLIFLRTLDSNGCIYKAGGGVLRVSKGGLVVMNGKKINGLY 343
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 144 bits (362), Expect = 8e-32
Identities = 106/395 (26%), Positives = 181/395 (45%), Gaps = 34/395 (8%)
Frame = -3
Query: 1085 DEYAYSSIILNLSDSVLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXLDLN 906
D A S I L+LS+++L++V K +A LW KLE++ L S L +
Sbjct: 90 DRKAMSYIHLHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDD 149
Query: 905 KEIDENLDVFTKLIQDIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKYGRDTITLDTV 726
+ ++L F +++ D++ K ++ ++LL ++P SY++ + I Y DT+ L V
Sbjct: 150 GSVMDHLSTFKEIVADLESIEVKYDEEDLGLILLCSLPSSYANFRDTILYSHDTLILKEV 209
Query: 725 VNGLKSKELDLKV---------------------NRSSXXXXXXXXXXXXXXXXXXXXXX 609
+ L +KE K+ +
Sbjct: 210 YDALHAKEKMKKMVPSEGSNSQAEGLVVRGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYK 269
Query: 608 KCYECGQSGHYIREC-----PNKRGNQNF---KQNEHANMASTSENVPD--VFMVYENCA 459
C C + GH I EC +KR + K+ E A ++ D + + Y CA
Sbjct: 270 SCKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCA 329
Query: 458 DVNSVRSNSVCETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVC 279
+ +W++D+ T+HM P + F+ Y+ + G+V + + C + GIG V
Sbjct: 330 QTSD---------QWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQ 380
Query: 278 LKFDSGYVLTLKNVRHVPDLCSNLISCASLEDDGLEGKWGKGLMKILKGNLVIFKA-VKR 102
+K GY+ TL +VRH+P+L +LIS +L+ G + G G++K+ KG+LV+ KA +K
Sbjct: 381 IKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKS 440
Query: 101 RNLYVCTAELESSLQNSVNAVCG--SENDKTDLWH 3
NLY +++ +V AV S +D T+LWH
Sbjct: 441 ANLYHLRG---TTILGNVAAVSDSLSNSDATNLWH 472
>dbj|BAA97536.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1338
Score = 142 bits (357), Expect = 3e-31
Identities = 97/366 (26%), Positives = 169/366 (46%), Gaps = 18/366 (4%)
Frame = -3
Query: 1091 EIDEYAYSSIILNLSDSVLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXLD 912
E + A S IIL+++D++LR++ +A + L++LY L S +
Sbjct: 83 EKENKARSVIILSVADNILRRIRTEETAAGMISVLDKLYLSDPLSSRISLKRKLFEFKMS 142
Query: 911 LNKEIDENLDVFTKLIQDIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKYGRDTITLD 732
NK ++EN++ F ++++D++ D+ +LL ++P +K ++ Y + +TL
Sbjct: 143 ENKAVEENIEDFFRIVEDLEKLDVYVSDEDKAFMLLLSLPRKLEQLKYSLDYCEEPLTLG 202
Query: 731 TVVNGLKSKELD----------------LKVNRSSXXXXXXXXXXXXXXXXXXXXXXKCY 600
V+ + KEL+ L+ S C+
Sbjct: 203 RVMTAIYKKELEVAQIERQTEEEEKRLSLRERERSDYREEQAKGKEKVRSEAREKKGPCW 262
Query: 599 ECGQSGHYIRECPNKRGNQNFKQNEHANMASTSENVP--DVFMVYENCADVNSVRSNSVC 426
CGQ GH EC ++ N++ K++ +S V VFMV E A R++
Sbjct: 263 RCGQKGHVKTECFQEKKNKSRKKSVRYEESSAQSIVSGGSVFMVSEAAA-----RASKGS 317
Query: 425 ETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTL 246
EW+ D+GCT HM+ K F + G+VS+AN + GIG V + D G + L
Sbjct: 318 SEEWICDTGCTSHMSSRKEWFEDLVFSESGNVSMANDTTLQVKGIGSVRILNDDGTTVLL 377
Query: 245 KNVRHVPDLCSNLISCASLEDDGLEGKWGKGLMKILKGNLVIFKAVKRRNLYVCTAELES 66
NV ++P + NLIS +LE+ G K G++K++KG + + KA K LY+ + +
Sbjct: 378 TNVMYIPGMSKNLISLGTLENKGCWFKSKNGILKVIKGCITLMKAEKVGTLYMLKGKAVT 437
Query: 65 SLQNSV 48
+ + +V
Sbjct: 438 ARRRAV 443
>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 142 bits (357), Expect = 3e-31
Identities = 104/376 (27%), Positives = 180/376 (47%), Gaps = 18/376 (4%)
Frame = -3
Query: 1076 AYSSIILNLSDSVLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXLDLNKEI 897
A S+I+L+++D VLRK+ K SA A+ L++LY +LP+ + N I
Sbjct: 74 ARSAIVLSVTDRVLRKIKKEQSAAAMLGVLDKLYMSKALPNRIYQKQKLYSFKMSENLSI 133
Query: 896 DENLDVFTKLIQDIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKY--GRDTITLDTVV 723
+ N+D F ++I D++ T D+ I+LL ++P+ + ++ +KY GR T++LD VV
Sbjct: 134 EGNIDEFLRIIADLENTNVLVSDEDQAILLLMSLPKPFDQLRDTLKYGLGRVTLSLDEVV 193
Query: 722 NGLKSKELDLKVNRSSXXXXXXXXXXXXXXXXXXXXXXKCYECGQS-GHYIRECPNKRGN 546
+ SKEL+L N+ S GQ+ G +++E RG
Sbjct: 194 AAIYSKELELGSNKKSIK-------------------------GQAEGLFVKEKTETRGR 228
Query: 545 QNFKQNEHANMASTSEN--------VPDVFMVYENCADVNSVRSNSV-------CETEWL 411
+ N + N S S++ + N ++ N + + E EW+
Sbjct: 229 TEQRGNNNNNKKSRSKSRSKKGCWICGESSNGSSNYSEANGLYVSEALSSTDIHLEDEWV 288
Query: 410 VDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRH 231
+D+GC++HMT + F + E GSV + N+ + GIG + +K ++G V+ L NVR+
Sbjct: 289 MDTGCSYHMTYKREWFEDLNEDAGGSVRMGNKTVSKVRGIGTIRVKNEAGMVVRLTNVRY 348
Query: 230 VPDLCSNLISCASLEDDGLEGKWGKGLMKILKGNLVIFKAVKRRNLYVCTAELESSLQNS 51
+P++ NL+S + E G K G + I+ G+ V+ + LY+ + + S
Sbjct: 349 IPEMDRNLLSLGTFEKSGYSFKLENGTLSIIAGDSVLLTVRRCYTLYL--LQWRPVTEES 406
Query: 50 VNAVCGSENDKTDLWH 3
++ V D T LWH
Sbjct: 407 LSVV--KRQDDTILWH 420
>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
Length = 950
Score = 139 bits (349), Expect = 3e-30
Identities = 103/383 (26%), Positives = 184/383 (48%), Gaps = 20/383 (5%)
Frame = -3
Query: 1091 EIDEYAYSSIILNLSDSVLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXLD 912
E+ A+S+I+L+L+D VLR+V +A LW K E Y + SL + +
Sbjct: 54 EVVSRAHSAILLSLADEVLREVADETTAVGLWRKFESKYQKKSLTNRLYQKRQLHTLKMS 113
Query: 911 LNKEIDENLDVFTKLIQDIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKYGRDTITLD 732
++ ++L+ F ++I D+ G K ++ ++LL ++P SY + + YGR++I+ +
Sbjct: 114 EGMQVRDHLNNFNRIILDLNGVGVKVEEEDQAMILLCSLPSSYENFVDTMMYGRBSISXN 173
Query: 731 TVVNGLKSKELDLKVNRSSXXXXXXXXXXXXXXXXXXXXXXK------------CYECGQ 588
V + L+SKEL V+ S + C+ +
Sbjct: 174 DVKDALQSKELQKLVSGSEEGSVETGLTVSRGRSMERNGGGRSKSXSKSKAAMRCFHXKE 233
Query: 587 SGHYIRECPNKRGNQNFKQNEHANMASTSENVPDVFMVYEN-CADVNSVRSNSVCETEWL 411
GH+ + CP ++ N +A + ++ E DV +V ++S E+ W+
Sbjct: 234 KGHFRKNCPQRQKGIGXGSNGNAQVVVAQKDSEKQDSSDEGEGGDVLTVSTSSSAES-WI 292
Query: 410 VDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRH 231
+D+G ++HM + LF+ +KE +GSV L + + + G G V +K G V TL N +
Sbjct: 293 LDTGASYHMAYSRDLFTTFKE-WNGSVKLGDDGELGVKGSGSVQIKMYDGLVRTL-NAWY 350
Query: 230 VPDLCSNLISCASLEDDGLEGKWGKGLMKILKGNLVIFKAVKRRNLYVC-------TAEL 72
VP L NLIS +L+ +G G++++ KG LV+ K + +Y TA +
Sbjct: 351 VPGLRKNLISVGTLDKNGYTFSGSGGVLRVSKGALVVMKGRLQHGIYTLMGSSVLGTAAV 410
Query: 71 ESSLQNSVNAVCGSENDKTDLWH 3
SS+ ++++V +N T+LWH
Sbjct: 411 SSSM--AIDSVEKKDN-CTELWH 430
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 138 bits (348), Expect = 3e-30
Identities = 105/386 (27%), Positives = 172/386 (44%), Gaps = 23/386 (5%)
Frame = -3
Query: 1091 EIDEYAYSSIILNLSDSVLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXLD 912
E+D+ A +++ L ++DSVL + + +AK +W+ L +LY SL + +
Sbjct: 49 EMDDNAVANLHLAMADSVLSSIAEKKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRMG 108
Query: 911 LNKEIDENLDVFTKLIQDIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKYGR--DTIT 738
+ + ++++ L + + K ++ +LL ++P+SY + I DT+
Sbjct: 109 ESTSVTDHINTLNTLFSQLTASDFKIAENERAELLLQSLPDSYDQLIINITNNNITDTLH 168
Query: 737 LDTVVNGLKSKELDLKVNRS-----------------SXXXXXXXXXXXXXXXXXXXXXX 609
D V + +E K S
Sbjct: 169 FDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRRKKNI 228
Query: 608 KCYECGQSGHYIRECPN--KRGNQNFKQNEHAN-MASTSENVPDVFMVYENCADVNSVRS 438
KCY CG GH +EC N K G +N + + +ASTS+ D ++Y A S +
Sbjct: 229 KCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSD---DGEILYSEAA--TSSKG 283
Query: 437 NSVCETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGY 258
W++DSG T+HMTP + F +Y+ + GSV + N I G+G + LK G
Sbjct: 284 ERRLNDVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGT 343
Query: 257 VLTLKNVRHVPDLCSNLISCASLEDDGLEGKWGKGLMKILKGNLVIFKAVK-RRNLYVCT 81
V ++ VRHV L NL+S L+D G + G++K++KGNLV+ KA K NLY+
Sbjct: 344 VRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLL 403
Query: 80 AELESSLQNSVNAVCGSENDKTDLWH 3
+ SV A S+ + T +WH
Sbjct: 404 GDTLQEADASVAA--SSQEETTMMWH 427
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 138 bits (348), Expect = 3e-30
Identities = 105/386 (27%), Positives = 172/386 (44%), Gaps = 23/386 (5%)
Frame = -3
Query: 1091 EIDEYAYSSIILNLSDSVLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXLD 912
E+D+ A +++ L ++DSVL + + +AK +W+ L +LY SL + +
Sbjct: 49 EMDDNAVANLHLAMADSVLSSIAEKKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRMG 108
Query: 911 LNKEIDENLDVFTKLIQDIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKYGR--DTIT 738
+ + ++++ L + + K ++ +LL ++P+SY + I DT+
Sbjct: 109 ESTSVTDHINTLNTLFSQLTASDFKIAENERAELLLQSLPDSYDQLIINITNNNIADTLH 168
Query: 737 LDTVVNGLKSKELDLKVNRS-----------------SXXXXXXXXXXXXXXXXXXXXXX 609
D V + +E K S
Sbjct: 169 FDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRRKKNI 228
Query: 608 KCYECGQSGHYIRECPN--KRGNQNFKQNEHAN-MASTSENVPDVFMVYENCADVNSVRS 438
KCY CG GH +EC N K G +N + + +ASTS+ D ++Y A S +
Sbjct: 229 KCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSD---DGEILYSEAA--TSSKG 283
Query: 437 NSVCETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGY 258
W++DSG T+HMTP + F +Y+ + GSV + N I G+G + LK G
Sbjct: 284 ERRLNDVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGT 343
Query: 257 VLTLKNVRHVPDLCSNLISCASLEDDGLEGKWGKGLMKILKGNLVIFKAVK-RRNLYVCT 81
V ++ VRHV L NL+S L+D G + G++K++KGNLV+ KA K NLY+
Sbjct: 344 VRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLL 403
Query: 80 AELESSLQNSVNAVCGSENDKTDLWH 3
+ SV A S+ + T +WH
Sbjct: 404 GDTLQEADASVAA--ASQEETTMMWH 427
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 138 bits (347), Expect = 4e-30
Identities = 99/383 (25%), Positives = 163/383 (42%), Gaps = 20/383 (5%)
Frame = -3
Query: 1091 EIDEYAYSSIILNLSDSVLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXLD 912
E+D+ A +++ L ++DSVL + + +AK +W+ L +LY SL + +
Sbjct: 49 EMDDNAVANLHLAMADSVLSSIAEKKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLRMG 108
Query: 911 LNKEIDENLDVFTKLIQDIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKYGR--DTIT 738
+ + ++++ L + + K ++ +LL ++P+SY + I DT+
Sbjct: 109 ESTSVTDHINTLNTLFSQLTASDFKIAENERAELLLQSLPDSYDQLIINITNNNIADTLH 168
Query: 737 LDTVVNGLKSKELDLKVNRS-----------------SXXXXXXXXXXXXXXXXXXXXXX 609
D V + +E K S
Sbjct: 169 FDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRRKNNI 228
Query: 608 KCYECGQSGHYIRECPNKRGNQNFKQNEHANMASTSENVPDVFMVYENCADVNSVRSNSV 429
KCY CG GH +EC N + N + + D ++Y A S
Sbjct: 229 KCYGCGMKGHVKKECWNNKKNGEKNSEATTSQGCVASTSDDGEILYSEAA--TSSEGERQ 286
Query: 428 CETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGYVLT 249
W++DSG T+HMTP + F +Y+ + GSV + N I G+G + LK G V
Sbjct: 287 LNDVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRK 346
Query: 248 LKNVRHVPDLCSNLISCASLEDDGLEGKWGKGLMKILKGNLVIFKAVK-RRNLYVCTAEL 72
++ VRHV L NL+S L+D G + G++K++KGNLV+ KA K NLY+ +
Sbjct: 347 IQGVRHVKGLKKNLLSVGQLDDLGCKIHSESGILKVVKGNLVVMKAEKITSNLYMLLGDT 406
Query: 71 ESSLQNSVNAVCGSENDKTDLWH 3
SV A S+ + T +WH
Sbjct: 407 LQEADASVAA--ASQEETTMMWH 427
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 137 bits (345), Expect = 8e-30
Identities = 105/386 (27%), Positives = 171/386 (44%), Gaps = 23/386 (5%)
Frame = -3
Query: 1091 EIDEYAYSSIILNLSDSVLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXLD 912
E+D+ A +++ L ++DSVL + + +AK +W+ L +LY SL + +
Sbjct: 49 EMDDNAVANLHLAMADSVLSSIAEKKTAKEIWDTLIKLYEVKSLHNRIFLKRRLYTLQMG 108
Query: 911 LNKEIDENLDVFTKLIQDIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKYGR--DTIT 738
+ + ++++ L + + K + +LL ++P+SY + I DT+
Sbjct: 109 ESTSVTDHINTLNTLFSQLTASDFKIAKNERAELLLQSLPDSYDQLIINITNNNIADTLH 168
Query: 737 LDTVVNGLKSKELDLKVNRS-----------------SXXXXXXXXXXXXXXXXXXXXXX 609
D V + +E K S
Sbjct: 169 FDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERGPSGSQNHGRSKSRRKKNI 228
Query: 608 KCYECGQSGHYIRECPN--KRGNQNFKQNEHAN-MASTSENVPDVFMVYENCADVNSVRS 438
KCY CG GH +EC N K G +N + + +ASTS+ D ++Y A S +
Sbjct: 229 KCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSD---DGEILYSEAA--TSSKG 283
Query: 437 NSVCETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSVSLANQKQCNIVGIGDVCLKFDSGY 258
W++DSG T+HMTP + F +Y+ + GSV + N I G+G + LK G
Sbjct: 284 ERRLNDVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGT 343
Query: 257 VLTLKNVRHVPDLCSNLISCASLEDDGLEGKWGKGLMKILKGNLVIFKAVK-RRNLYVCT 81
V ++ VRHV L NL+S L+D G + G++K++KGNLV+ KA K NLY+
Sbjct: 344 VRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLL 403
Query: 80 AELESSLQNSVNAVCGSENDKTDLWH 3
+ SV A S+ + T +WH
Sbjct: 404 GDTLQEADASVAA--ASQEETTMMWH 427
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 136 bits (342), Expect = 2e-29
Identities = 104/389 (26%), Positives = 173/389 (44%), Gaps = 28/389 (7%)
Frame = -3
Query: 1085 DEYAYSSIILNLSDSVLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXLDLN 906
D+ A + I L+L + +L++ ++ LW KLE + L S +
Sbjct: 53 DQKALALIQLHLHNDILQECLTEKTSAELWLKLESICMSKDLTSKMQMKMKLFTLKMKEE 112
Query: 905 KEIDENLDVFTKLIQDIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKYGRDTITLDTV 726
+ ++ F K++ D+ K D+ ++LL ++P SY++ + I RD +TL V
Sbjct: 113 DSVITHMAEFKKIVADLVSMEVKYDDEDLGLLLLCSLPNSYANFRDTILLSRDELTLKEV 172
Query: 725 VNGLKSKELDLKV----------------------NRSSXXXXXXXXXXXXXXXXXXXXX 612
+ L++KE +K+ NR+S
Sbjct: 173 YDALQNKE-KMKIMVQNDGSSSSKGEALHVRGRTENRTSNEKNYDRRGRSKSKPPGNKKF 231
Query: 611 XKCYECGQSGHYIRECPN----KRGNQNFKQNEHANMASTSENVPDVFMVYENCADVNSV 444
C C H I EC +R N+ + A+ A++ ++ D +V+ C +
Sbjct: 232 --CVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGDCLVVFAGCVAGHD- 288
Query: 443 RSNSVCETEWLVDSGCTFHMTPFKRLFSNYKEVLHGSV-SLANQKQCNIVGIGDVCLKFD 267
EW++DS C+FH+ + FS+YK V G V + + C IVGIG V +K D
Sbjct: 289 --------EWILDSACSFHICTKRNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTD 340
Query: 266 SGYVLTLKNVRHVPDLCSNLISCASLEDDGLEGKWGKGLMKILKGNLVIFKA-VKRRNLY 90
G TLKNVR++P + NLIS ++L+ +G + G++K+ KG+LV K V LY
Sbjct: 341 DGMTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDVNSAKLY 400
Query: 89 VCTAELESSLQNSVNAVCGSENDKTDLWH 3
V + ++ A+ E KT+LWH
Sbjct: 401 VLRGCTLTGSDSAAAAITNDEPSKTNLWH 429
>emb|CAN71583.1| hypothetical protein VITISV_043292 [Vitis vinifera]
Length = 531
Score = 136 bits (342), Expect = 2e-29
Identities = 99/351 (28%), Positives = 163/351 (46%), Gaps = 5/351 (1%)
Frame = -3
Query: 1040 VLRKVGKLASAKALWEKLEELYTETSLPSXXXXXXXXXXXXLDLNKEIDENLDVFTKLIQ 861
VLRKV + A +W+KLEE+Y SLP+ + K IDE +D FTKL+
Sbjct: 15 VLRKVSREILASTIWKKLEEIYMLKSLPNRIYLKQKFFGFKMHEKKSIDEIIDEFTKLVV 74
Query: 860 DIKLTGDKNIDDYTPIVLLNAIPESYSDVKSAIKYGRDTITLDTVVNGLKSKELDLKVNR 681
D++ K D+ ++LLN++P+ + ++ +KY +D+++L+ VV+ + +K++D++V R
Sbjct: 75 DLESLCVKIEDEDQAVLLLNSLPKVFDQLRDTLKYSKDSLSLEGVVSAIHAKKMDIRVER 134
Query: 680 ----SSXXXXXXXXXXXXXXXXXXXXXXKCYECGQSGHYIRECPNKRGNQNFKQNEHANM 513
SS + + R+C + ++++ +
Sbjct: 135 IGTTSSEGLVVRGRPKKRNNNQKGNHDKSKSKSKSKSKFTRKCFHCHKEGHYREXXDVAI 194
Query: 512 ASTSENVPDVFMVYENCADVNSVRSNSVCETEWLVDSGC-TFHMTPFKRLFSNYKEVLHG 336
A + DV MV + D+ S EW++DSG FHM P K FS Y E+ G
Sbjct: 195 AFEGYDXVDVLMVAKK--DLTS---------EWILDSGXKXFHMCPIKSWFSRYMELKEG 243
Query: 335 SVSLANQKQCNIVGIGDVCLKFDSGYVLTLKNVRHVPDLCSNLISCASLEDDGLEGKWGK 156
V + + C + TL NVR+V DL NLI L+ G K
Sbjct: 244 KVLMGXNEACKVTN--------GMAMERTLTNVRYVLDLKRNLIXMGMLDSMGCTIKIXN 295
Query: 155 GLMKILKGNLVIFKAVKRRNLYVCTAELESSLQNSVNAVCGSENDKTDLWH 3
G +KILKG ++ K +++ LY T + E+ + S+ A + + LWH
Sbjct: 296 GELKILKGAKIVMKGIRKNGLY--TLQGETVVGTSIVATKDGD-EIVKLWH 343