BLASTX nr result
ID: Rehmannia22_contig00000778
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00000778
(435 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX99296.1| Photosystem II reaction center PSB29 protein [The... 90 3e-16
gb|ESW21896.1| hypothetical protein PHAVU_005G108600g [Phaseolus... 89 5e-16
ref|XP_003543363.1| PREDICTED: protein THYLAKOID FORMATION1, chl... 87 2e-15
ref|XP_003540338.1| PREDICTED: protein THYLAKOID FORMATION1, chl... 87 2e-15
ref|NP_001275338.1| protein THYLAKOID FORMATION1, chloroplastic ... 87 2e-15
ref|XP_004293467.1| PREDICTED: protein THYLAKOID FORMATION1, chl... 87 2e-15
gb|ABV24460.1| chloroplast-localized protein [Nicotiana benthami... 87 2e-15
ref|XP_004243305.1| PREDICTED: protein THYLAKOID FORMATION1, chl... 87 3e-15
gb|AFK45541.1| unknown [Medicago truncatula] 87 3e-15
ref|XP_002275686.2| PREDICTED: protein THYLAKOID FORMATION1, chl... 87 3e-15
gb|ACJ84665.1| unknown [Medicago truncatula] gi|388509564|gb|AFK... 87 3e-15
ref|XP_004507227.1| PREDICTED: protein THYLAKOID FORMATION1, chl... 86 7e-15
gb|ACU18621.1| unknown [Glycine max] 85 9e-15
gb|AFK41560.1| unknown [Medicago truncatula] 85 1e-14
gb|ACJ84959.1| unknown [Medicago truncatula] 85 1e-14
ref|XP_004136805.1| PREDICTED: protein THYLAKOID FORMATION 1, ch... 84 1e-14
gb|EMJ16964.1| hypothetical protein PRUPE_ppa009554mg [Prunus pe... 83 3e-14
ref|XP_002517999.1| Protein THYLAKOID FORMATION1, chloroplast pr... 80 3e-13
ref|XP_006841855.1| hypothetical protein AMTR_s00003p00271230 [A... 80 4e-13
ref|XP_006447402.1| hypothetical protein CICLE_v10016098mg [Citr... 79 6e-13
>gb|EOX99296.1| Photosystem II reaction center PSB29 protein [Theobroma cacao]
Length = 298
Score = 90.1 bits (222), Expect = 3e-16
Identities = 55/105 (52%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Frame = +1
Query: 130 MAAVNSVSFAAVTQ-SAYRKFSIPSARNFVVSNSNAVNLRLPXXXXXXXXXXXXXXXXXX 306
MAAV+S+S +A+ Q S RK ++PSAR ++ SN + R
Sbjct: 1 MAAVSSLSLSAIGQTSGDRKVNVPSAR-YLASNFEGLRFRTSVLYHSVGVRGSASASPSV 59
Query: 307 XXX--TATDLPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
ATD+PTVSETKLNFLKAYKRPIPS+YNTVLQELIVQQHL
Sbjct: 60 VHCMCAATDVPTVSETKLNFLKAYKRPIPSVYNTVLQELIVQQHL 104
>gb|ESW21896.1| hypothetical protein PHAVU_005G108600g [Phaseolus vulgaris]
Length = 297
Score = 89.4 bits (220), Expect = 5e-16
Identities = 54/104 (51%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Frame = +1
Query: 130 MAAVNSVSFAAVTQSAYRKFSIPSARNFVVSNSNAVNLR--LPXXXXXXXXXXXXXXXXX 303
MAA+ S+SF+AVT RK S+ F+ S+S+ LR
Sbjct: 1 MAALTSLSFSAVTHCPERKKLTLSSTRFLTSSSDFFGLRTHFSYHHVRLPASNSTSNMVF 60
Query: 304 XXXXTATDLPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
+ TD PTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL
Sbjct: 61 QCMSSVTDAPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 104
>ref|XP_003543363.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
[Glycine max]
Length = 297
Score = 87.4 bits (215), Expect = 2e-15
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
Frame = +1
Query: 130 MAAVNSVSFAAVTQSAYRKFSIPSARNFVVSNSNAVNLR--LPXXXXXXXXXXXXXXXXX 303
MAA+ S+SF+AVT + RK ++ S R F+ S+S R
Sbjct: 1 MAALTSLSFSAVTHCSERKVTLSSTR-FLASSSELFGFRTDFSYHYVGVRASNSASKMVV 59
Query: 304 XXXXTATDLP-TVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
+ATD+P TVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL
Sbjct: 60 QCMSSATDVPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 104
>ref|XP_003540338.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
[Glycine max]
Length = 297
Score = 87.4 bits (215), Expect = 2e-15
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
Frame = +1
Query: 130 MAAVNSVSFAAVTQSAYRKFSIPSARNFVVSNSNAVNLR--LPXXXXXXXXXXXXXXXXX 303
MAA+ S+SF+AVT + RK ++ S R F+ S+S R
Sbjct: 1 MAALTSLSFSAVTHCSERKVTLSSTR-FLASSSEIFGFRTDFSYHYVGVRASNSPSKMVV 59
Query: 304 XXXXTATDLP-TVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
+ATD+P TVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL
Sbjct: 60 QCMSSATDVPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 104
>ref|NP_001275338.1| protein THYLAKOID FORMATION1, chloroplastic [Solanum tuberosum]
gi|75140959|sp|Q7XAB8.1|THF1_SOLTU RecName: Full=Protein
THYLAKOID FORMATION1, chloroplastic; Flags: Precursor
gi|33469614|gb|AAQ19850.1| light-regulated
chloroplast-localized protein [Solanum tuberosum]
Length = 293
Score = 87.4 bits (215), Expect = 2e-15
Identities = 53/108 (49%), Positives = 67/108 (62%), Gaps = 6/108 (5%)
Frame = +1
Query: 130 MAAVNSVSFAAVTQSAYRKFSIPSARNFVVS------NSNAVNLRLPXXXXXXXXXXXXX 291
MAAV SVSF+A+TQSA RK S+ S+R+ + ++VN+R
Sbjct: 1 MAAVTSVSFSAITQSAERKSSVSSSRSIDTFRFRSNFSFDSVNVR--------SSNSTSR 52
Query: 292 XXXXXXXXTATDLPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
+A DLPTV++TKL FL AYKRPIP++YNTVLQELIVQQHL
Sbjct: 53 FVVHCTSSSAADLPTVADTKLKFLTAYKRPIPTVYNTVLQELIVQQHL 100
>ref|XP_004293467.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 292
Score = 87.0 bits (214), Expect = 2e-15
Identities = 52/104 (50%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
Frame = +1
Query: 130 MAAVNSVSFAAVTQSAYRKFSIPSARNFVVSNSNAVNLR--LPXXXXXXXXXXXXXXXXX 303
MAAV S+SF+A+TQS++ PSARN + SNS+++ R
Sbjct: 1 MAAVTSLSFSALTQSSF-----PSARN-LGSNSDSLRFRTSFSLHYGGFRSSSSSPRLVV 54
Query: 304 XXXXTATDLPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
++++LPTV++TKLNFLKAYKRPIPS+YN+VLQELIVQQHL
Sbjct: 55 HCMSSSSELPTVADTKLNFLKAYKRPIPSVYNSVLQELIVQQHL 98
>gb|ABV24460.1| chloroplast-localized protein [Nicotiana benthamiana]
Length = 295
Score = 87.0 bits (214), Expect = 2e-15
Identities = 55/116 (47%), Positives = 67/116 (57%), Gaps = 14/116 (12%)
Frame = +1
Query: 130 MAAVNSVSFAAVTQSAYRKFSIPSARN--------------FVVSNSNAVNLRLPXXXXX 267
MAAV SVSF+A+ QSA RK S+ +R+ F V +SN+ R
Sbjct: 1 MAAVTSVSFSAIAQSAERKSSVSPSRSVDTFRFRSNVSFDCFNVRSSNSSFSR------- 53
Query: 268 XXXXXXXXXXXXXXXXTATDLPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
+TDLPTV+ETK+NFLKAYKRPIP++YNTVLQELIVQQHL
Sbjct: 54 -------STSRFVVHCMSTDLPTVAETKMNFLKAYKRPIPTVYNTVLQELIVQQHL 102
>ref|XP_004243305.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
[Solanum lycopersicum]
Length = 293
Score = 86.7 bits (213), Expect = 3e-15
Identities = 52/108 (48%), Positives = 67/108 (62%), Gaps = 6/108 (5%)
Frame = +1
Query: 130 MAAVNSVSFAAVTQSAYRKFSIPSARNFVVS------NSNAVNLRLPXXXXXXXXXXXXX 291
MAAV SVSF+A+TQSA RK S+ S+R+ + ++VN+R
Sbjct: 1 MAAVTSVSFSAITQSAERKSSVSSSRSIDTFRFRSNFSFDSVNVR--------SSNSTSR 52
Query: 292 XXXXXXXXTATDLPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
+A DLPTV++TK+ FL AYKRPIP++YNTVLQELIVQQHL
Sbjct: 53 FVVHCTSSSAADLPTVADTKMKFLTAYKRPIPTVYNTVLQELIVQQHL 100
>gb|AFK45541.1| unknown [Medicago truncatula]
Length = 303
Score = 86.7 bits (213), Expect = 3e-15
Identities = 54/106 (50%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Frame = +1
Query: 130 MAAV-NSVSFAAVTQSAYRKFSIPSARNFVVSNSNAVNLRLPXXXXXXXXXXXXXXXXXX 306
MAAV +S SF+ +TQS+ RK + S+ F S+S+AV R
Sbjct: 1 MAAVTSSFSFSTLTQSSQRKLTTLSSTRFFGSDSDAVRFRFSISLRYVGVVRTSNFVSKL 60
Query: 307 XXX---TATDLPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
+ +D PTVSETKLNFLKAYKRPIPSIYN+VLQELIVQQHL
Sbjct: 61 VVRCSSSVSDPPTVSETKLNFLKAYKRPIPSIYNSVLQELIVQQHL 106
>ref|XP_002275686.2| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Vitis
vinifera]
Length = 299
Score = 86.7 bits (213), Expect = 3e-15
Identities = 52/110 (47%), Positives = 66/110 (60%), Gaps = 8/110 (7%)
Frame = +1
Query: 130 MAAVNSVSFAAVTQSAYRKFSIPSARNFVVS--------NSNAVNLRLPXXXXXXXXXXX 285
MAAV S+SF+A+ QS+ RK +P+ R+F + N AV +R
Sbjct: 1 MAAVTSLSFSALGQSSERKVPVPTTRSFASAFEAFRFRANFYAVGVR-------SSSSSS 53
Query: 286 XXXXXXXXXXTATDLPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
+ TD+PTVSETK+NFLK YKRPIPSIYNT+LQEL+VQQHL
Sbjct: 54 SSRMVVQCMSSVTDVPTVSETKMNFLKNYKRPIPSIYNTLLQELMVQQHL 103
>gb|ACJ84665.1| unknown [Medicago truncatula] gi|388509564|gb|AFK42848.1| unknown
[Medicago truncatula]
Length = 219
Score = 86.7 bits (213), Expect = 3e-15
Identities = 54/106 (50%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Frame = +1
Query: 130 MAAV-NSVSFAAVTQSAYRKFSIPSARNFVVSNSNAVNLRLPXXXXXXXXXXXXXXXXXX 306
MAAV +S SF+ +TQS+ RK + S+ F S+S+AV R
Sbjct: 1 MAAVTSSFSFSTLTQSSQRKLTTLSSTRFFGSDSDAVRFRFSISLRYVGVVRTSNFVSKL 60
Query: 307 XXX---TATDLPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
+ +D PTVSETKLNFLKAYKRPIPSIYN+VLQELIVQQHL
Sbjct: 61 VVRCSSSVSDPPTVSETKLNFLKAYKRPIPSIYNSVLQELIVQQHL 106
>ref|XP_004507227.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like [Cicer
arietinum]
Length = 302
Score = 85.5 bits (210), Expect = 7e-15
Identities = 52/105 (49%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Frame = +1
Query: 130 MAAV-NSVSFAAVTQSAYRKFSIPSARNFVVSNSNAVNLRLPXXXXXXXXXXXXXXXXXX 306
MAAV +S S + +TQS+ RK ++ S+ FV S+S++ RL
Sbjct: 1 MAAVTSSFSLSTLTQSSQRKLTLSSSPRFVNSDSDSFRFRLSFSSHCVGLRASNSVSKMV 60
Query: 307 XXXTAT--DLPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
+++ D PTVSETKLNFL+AYKRPIPSIYN+VLQELIVQQHL
Sbjct: 61 VRCSSSVSDPPTVSETKLNFLEAYKRPIPSIYNSVLQELIVQQHL 105
>gb|ACU18621.1| unknown [Glycine max]
Length = 297
Score = 85.1 bits (209), Expect = 9e-15
Identities = 54/105 (51%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Frame = +1
Query: 130 MAAVNSVSFAAVTQSAYRKFSIPSARNFVVSNSNAVNLR--LPXXXXXXXXXXXXXXXXX 303
MAA+ S+SF+AV + RK ++ S R F+ S+S R
Sbjct: 1 MAALTSLSFSAVIHCSERKVTLSSTR-FLASSSELFGFRTDFSYHYVGVRASNSASKMVV 59
Query: 304 XXXXTATDLP-TVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
+ATD+P TVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL
Sbjct: 60 QCMSSATDVPPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 104
>gb|AFK41560.1| unknown [Medicago truncatula]
Length = 287
Score = 84.7 bits (208), Expect = 1e-14
Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Frame = +1
Query: 130 MAAVNSVSFAAVTQSAYRKFSIPSARNFVVSNSNAVNLRLPXXXXXXXXXXXXXXXXXXX 309
MAA+ S+SF+A +Q + RK ++ S R F+ S+S+ +R
Sbjct: 1 MAALTSLSFSATSQCSQRKSTLSSTR-FLASSSDMFGIRTDSSYHCVGVRVGNSASKMVI 59
Query: 310 XX--TATDLPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
+ TD+P+VSETKLNFLKAYKRPIPSIYN VLQELIVQ HL
Sbjct: 60 QCMSSVTDVPSVSETKLNFLKAYKRPIPSIYNNVLQELIVQHHL 103
>gb|ACJ84959.1| unknown [Medicago truncatula]
Length = 287
Score = 84.7 bits (208), Expect = 1e-14
Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Frame = +1
Query: 130 MAAVNSVSFAAVTQSAYRKFSIPSARNFVVSNSNAVNLRLPXXXXXXXXXXXXXXXXXXX 309
MAA+ S+SF+A +Q + RK ++ S R F+ S+S+ +R
Sbjct: 1 MAALTSLSFSATSQCSQRKSTLSSTR-FLASSSDMFGIRTDSSYHCVGVRVGNSASKMVI 59
Query: 310 XX--TATDLPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
+ TD+P+VSETKLNFLKAYKRPIPSIYN VLQELIVQ HL
Sbjct: 60 QCMSSVTDVPSVSETKLNFLKAYKRPIPSIYNNVLQELIVQHHL 103
>ref|XP_004136805.1| PREDICTED: protein THYLAKOID FORMATION 1, chloroplastic-like
[Cucumis sativus] gi|449493105|ref|XP_004159194.1|
PREDICTED: protein THYLAKOID FORMATION 1,
chloroplastic-like [Cucumis sativus]
Length = 298
Score = 84.3 bits (207), Expect = 1e-14
Identities = 51/104 (49%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Frame = +1
Query: 130 MAAVNSVSFAAVTQSAYRKFSIPSARNFVVSNSNAVNLRLPXXXXXXXXXXXXXXXXXXX 309
MAAVNS+SF+ + Q + R+ +PS+R+ SN + R
Sbjct: 1 MAAVNSISFSTLNQCSDRRLLLPSSRSHS-SNFHGFPFRTSVFTHYSRVRASTFSSRMVI 59
Query: 310 XXTA--TDLPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
+ TD+ TV+ETKLNFLKAYKRPIPSIYNTVLQELIVQQHL
Sbjct: 60 HCMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 103
>gb|EMJ16964.1| hypothetical protein PRUPE_ppa009554mg [Prunus persica]
Length = 287
Score = 83.2 bits (204), Expect = 3e-14
Identities = 52/104 (50%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Frame = +1
Query: 130 MAAVNSVSFAAVTQSAYRKFSIPSARNFVVSNSNAVNLRLPXXXXXXXXXXXXXXXXXXX 309
MAAV S+SF+A++Q + RK I S RN NS + LR
Sbjct: 1 MAAVASLSFSALSQCSDRKSVISSTRNLAY-NSEGLRLRTSFSCNNGGVRASSSSSRMMI 59
Query: 310 XXT--ATDLPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
A+ PTV++TKLNFLKAYKRPIPS+YNTVLQELIVQQHL
Sbjct: 60 HCMSGASYAPTVADTKLNFLKAYKRPIPSVYNTVLQELIVQQHL 103
>ref|XP_002517999.1| Protein THYLAKOID FORMATION1, chloroplast precursor, putative
[Ricinus communis] gi|223542981|gb|EEF44517.1| Protein
THYLAKOID FORMATION1, chloroplast precursor, putative
[Ricinus communis]
Length = 299
Score = 80.1 bits (196), Expect = 3e-13
Identities = 54/110 (49%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
Frame = +1
Query: 130 MAAVNSVSFAAVTQSAYRKFSIPS-ARNFVVSNSNAVNLRLPXXXXXXXXXXXXXXXXXX 306
MAAV SVSF+A+ QS + S+ S +R+F +SN + R P
Sbjct: 1 MAAVTSVSFSAIAQSFTERKSVASWSRSF---SSNFDSFRFPVGGFSCHYVGVKASNSSS 57
Query: 307 XXX------TATDLP-TVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
TATD+P TVSETK NFL +YK+PIPSIYNTVLQELIVQQHL
Sbjct: 58 SRMLIHCMSTATDVPPTVSETKFNFLNSYKKPIPSIYNTVLQELIVQQHL 107
>ref|XP_006841855.1| hypothetical protein AMTR_s00003p00271230 [Amborella trichopoda]
gi|548843876|gb|ERN03530.1| hypothetical protein
AMTR_s00003p00271230 [Amborella trichopoda]
Length = 298
Score = 79.7 bits (195), Expect = 4e-13
Identities = 52/113 (46%), Positives = 64/113 (56%), Gaps = 11/113 (9%)
Frame = +1
Query: 130 MAAVNSVSFAAVTQSAYRK-----------FSIPSARNFVVSNSNAVNLRLPXXXXXXXX 276
MAA++S+SFAA T ++ RK F+I R + S VN R
Sbjct: 1 MAAISSLSFAAATPASERKGLCRPTLSNNLFNIEPFRLRSTNGSYLVNAR---------S 51
Query: 277 XXXXXXXXXXXXXTATDLPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
+ATD+PTV+ETK NFL++YKRPIPSIYNTVLQELIVQQHL
Sbjct: 52 IASYSPSIIRCVSSATDVPTVAETKGNFLRSYKRPIPSIYNTVLQELIVQQHL 104
>ref|XP_006447402.1| hypothetical protein CICLE_v10016098mg [Citrus clementina]
gi|568831117|ref|XP_006469826.1| PREDICTED: protein
THYLAKOID FORMATION1, chloroplastic-like [Citrus
sinensis] gi|557550013|gb|ESR60642.1| hypothetical
protein CICLE_v10016098mg [Citrus clementina]
Length = 299
Score = 79.0 bits (193), Expect = 6e-13
Identities = 52/106 (49%), Positives = 64/106 (60%), Gaps = 4/106 (3%)
Frame = +1
Query: 130 MAAVNSVSFAAVTQ-SAYRKFSIPSARNFVVSNSNAVNLR--LPXXXXXXXXXXXXXXXX 300
MA++ SV+F ++ Q S RK ++ S R+ +VSN R L
Sbjct: 1 MASLTSVAFTSIGQTSCQRKVNVSSTRS-LVSNFEGFRFRTSLFCHCVRFRASSSSSRMI 59
Query: 301 XXXXXTATDLP-TVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHL 435
TATD+P TV+ETK+NFLK YKRPIPSIYNTVLQELIVQQHL
Sbjct: 60 IQCMSTATDVPPTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHL 105