BLASTX nr result
ID: Rehmannia22_contig00000767
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia22_contig00000767
(543 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670... 128 1e-27
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 111 1e-22
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 107 2e-21
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 106 3e-21
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 102 6e-20
ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668... 99 6e-19
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 94 3e-17
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661... 92 8e-17
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 88 1e-15
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 81 1e-13
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A... 76 4e-12
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660... 72 1e-10
gb|EEC70571.1| hypothetical protein OsI_01753 [Oryza sativa Indi... 71 2e-10
emb|CAN69470.1| hypothetical protein VITISV_014371 [Vitis vinifera] 71 2e-10
gb|EAZ11749.1| hypothetical protein OsJ_01617 [Oryza sativa Japo... 71 2e-10
gb|AAF79677.1|AC022314_18 F9C16.26 [Arabidopsis thaliana] 70 4e-10
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 68 2e-09
gb|AAF81336.1|AC007767_16 Strong similarity to a putative non-LT... 67 3e-09
ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arab... 67 3e-09
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 67 3e-09
>ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max]
Length = 383
Score = 128 bits (321), Expect = 1e-27
Identities = 68/181 (37%), Positives = 96/181 (53%), Gaps = 4/181 (2%)
Frame = -3
Query: 538 PIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVHGFYLRNQSIWTWNPRKDDST 359
P +EGGLG+ ++ WN ALLS ILW H ++LWVR VH +Y + ++W + DS
Sbjct: 179 PKKEGGLGLFNLKDWNIALLSCILWDLHSKKDSLWVRLVHHYYFKGGNVWDFISSSSDSV 238
Query: 358 LLKRICDIRDELTQKFGSQQAAIDALTPLVNDNGLN----SSKMYDIFRNEGPRHFWHNA 191
+ IRD + K + I+ ++N G N + KMYD R P W +
Sbjct: 239 FIH----IRDIIISK----EENIEVAKLMLNSWGCNEQTLAGKMYDYIRGTRPVVHWSSI 290
Query: 190 IWKQFIPPKFSFCTWLACKDRLSTLDNLSYIDTDPMCKLCKNELETAPHLFFMCTVTNSL 11
IW IP K SF WLA K+RL LD ++++ +C LC NE E+ HLFF C + +
Sbjct: 291 IWNPVIPSKMSFILWLATKNRLLALDRAAFLNKGFLCPLCTNEAESHAHLFFSCRTSLRV 350
Query: 10 W 8
W
Sbjct: 351 W 351
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 111 bits (277), Expect = 1e-22
Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 7/184 (3%)
Frame = -3
Query: 538 PIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVHGFYLRNQSIWTWNPRKDDST 359
P GGL + ++ WNKA + K+LW + LWVRWV+ +Y++ Q+I + S
Sbjct: 856 PKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVRWVNAYYIKRQNIENVTVSSNTSW 915
Query: 358 LLKRICDIRDELTQKFGSQQAAIDALTPLVNDNGLNSSKMYDIFRNEGPRHFWHNAIWKQ 179
+L++I + R+ LT+ G + + N + K Y + + + + N +WK+
Sbjct: 916 ILRKIFESRELLTRTGGWEAVS--------NHMNFSIKKTYKLLQED-----YENVVWKR 962
Query: 178 FI-----PPKFSFCTWLACKDRLSTLDNLS--YIDTDPMCKLCKNELETAPHLFFMCTVT 20
I PK F WLA +RL+T + +S D P+CK+C NE+ET HLFF C +
Sbjct: 963 LICNNKATPKSQFILWLAMLNRLATAERVSRWNRDVSPLCKMCGNEIETIQHLFFNCIYS 1022
Query: 19 NSLW 8
+W
Sbjct: 1023 KEIW 1026
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 107 bits (266), Expect = 2e-21
Identities = 58/179 (32%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Frame = -3
Query: 538 PIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVHGFYLRNQSIWTWNPRKDDST 359
P +EGGLG+R + N+ K++W+ T +LWVRW+ + L++ + W+ + +
Sbjct: 395 PKQEGGLGLRSLKEMNEVSCLKLIWRIVSHTNSLWVRWIEQYLLKHDTFWSVQTTTNMDS 454
Query: 358 LLKRICDIRDELTQKFGSQQAAIDALTPLVNDNGLNSSKMYDIFRNEGPRHFWHNAIWKQ 179
+L R DE KF ++ ++ RN WH IW
Sbjct: 455 VLWR--GRNDEYMPKFSTRDT-------------------WNQTRNTSTPVTWHMGIWFA 493
Query: 178 FIPPKFSFCTWLACKDRLSTLDNLSYID--TDPMCKLCKNELETAPHLFFMCTVTNSLW 8
PKFSFC WLA ++RLST D + + P C LC N +ET HLFF C T +W
Sbjct: 494 HATPKFSFCAWLAVQNRLSTGDKMLQWNRRLSPTCVLCNNNIETRNHLFFSCCYTAEIW 552
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 106 bits (265), Expect = 3e-21
Identities = 59/176 (33%), Positives = 89/176 (50%), Gaps = 3/176 (1%)
Frame = -3
Query: 526 GGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVHGFYLRNQSIWTWNPRKDDSTLLKR 347
GGL I D+ WNKA L K+LW ++LWV+W+ +Y++ + + DS ++K
Sbjct: 243 GGLNIIDIDIWNKANLMKLLWNLSSKEDSLWVKWIQAYYVKRSELMHIEMKNTDSWIMKA 302
Query: 346 ICDIRDELTQKFGSQQAAIDALTPLVNDNGLNSSKMYDIFRNEGPRHFWHNAIWKQFIPP 167
I R++L + ID + L+ +N K+Y ++ G R W N ++ P
Sbjct: 303 ILKQREDLEK--------IDNMEELMIRGSINMGKLYRKLQDCGQRKEWKNLLYGNTARP 354
Query: 166 KFSFCTWLACKDRLSTLDNL---SYIDTDPMCKLCKNELETAPHLFFMCTVTNSLW 8
+ +F WLAC RLST D L ID D C C E E+ HLFF+C + +W
Sbjct: 355 RANFILWLACHGRLSTKDRLCKYGMID-DKSCCFCSEE-ESMNHLFFVCDNSKRVW 408
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 102 bits (254), Expect = 6e-20
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 2/181 (1%)
Frame = -3
Query: 538 PIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVHGFYLRNQSIWTWNPRKDDST 359
P GG + ++ WN+A + K+LW + LWVRW+H +Y++ Q I T N +
Sbjct: 853 PKSRGGWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHSYYIKRQDILTVNISNQTTW 912
Query: 358 LLKRICDIRDELTQKFGSQQAAIDALTPLVNDNGLNSSKMYDIFRNEGPRHFWHNAIWKQ 179
+L++I RD L+ I + + + K Y G R W I
Sbjct: 913 ILRKIVKARDHLSN--------IGDWDEICIGDKFSMKKAYKKISENGERVRWRRLICNN 964
Query: 178 FIPPKFSFCTWLACKDRLSTLDNLSY--IDTDPMCKLCKNELETAPHLFFMCTVTNSLWC 5
+ PK F W+ +RL T+D +S + D +LC+N+ ET HLFF C+ + +W
Sbjct: 965 YATPKSKFILWMMLHERLPTVDRISRWGVQCDLNYRLCRNDGETIQHLFFSCSYSAGVWS 1024
Query: 4 R 2
+
Sbjct: 1025 K 1025
>ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668530 [Glycine max]
Length = 477
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/139 (33%), Positives = 75/139 (53%)
Frame = -3
Query: 424 VHGFYLRNQSIWTWNPRKDDSTLLKRICDIRDELTQKFGSQQAAIDALTPLVNDNGLNSS 245
VH Y + ++W + DS L+K+I IRD +T K + +AA L ++ L +
Sbjct: 242 VHHNYFKGGNVWDFISSASDSVLIKKIIHIRDIITIKEDNVEAAKQTLNSWNSNEQLLAG 301
Query: 244 KMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYIDTDPMCKLCKN 65
K YD R P W++ +W IP K SF WLA K+ L TLD ++++ +C LC+
Sbjct: 302 KAYDYIRGVKPAVNWNSVVWNPAIPSKMSFILWLATKNHLLTLDRAAFLNKGLLCPLCRT 361
Query: 64 ELETAPHLFFMCTVTNSLW 8
+ ++ HLFF C ++ +W
Sbjct: 362 KAKSHAHLFFSCRISLQVW 380
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 93.6 bits (231), Expect = 3e-17
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 2/179 (1%)
Frame = -3
Query: 538 PIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVHGFYLRNQSIWTWNPRKDDST 359
P GGL I ++ WNK + K+LW ++ LW++W+H +Y+R QSIW+ +K S
Sbjct: 681 PKINGGLNIINLAIWNKISILKLLWNVCNKSDNLWIKWLHTYYIRGQSIWSMVLKKSHSW 740
Query: 358 LLKRICDIRDELTQKFGSQQAAIDALTPLVNDNGLNSSKMYDIFRNEGPRHFWHNAIWKQ 179
++ + +R L Q Q + K+Y E + W +
Sbjct: 741 IMSSMMKLRPLLLQYQSRMQ------------DVFKMKKIYLALFEESEKMSWRTLMCNN 788
Query: 178 FIPPKFSFCTWLACKDRLSTLDNLSY--IDTDPMCKLCKNELETAPHLFFMCTVTNSLW 8
P+ FC W AC RL++ D L ++ D C C + +E+ HLFF C ++W
Sbjct: 789 LARPRALFCLWQACHFRLASKDRLIKFGLNVDANCAFC-SSMESHEHLFFGCIELKTIW 846
>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
Length = 947
Score = 92.0 bits (227), Expect = 8e-17
Identities = 57/183 (31%), Positives = 78/183 (42%), Gaps = 6/183 (3%)
Frame = -3
Query: 538 PIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVHGFYLRNQSIWTWNPRKDDST 359
P +GGL I ++ WN + LW + + LWV+W+H Y++N S+ + S
Sbjct: 681 PKGQGGLNIFNLKVWNHITVLNCLWNLCKKVDNLWVKWIHAHYIKNSSVMNTMVTNNFSW 740
Query: 358 LLKRICDIRDELTQKFGSQQAAIDALTP----LVNDNGLNSSKMYDIFRNEGPRHFWHNA 191
+LK + SQ+ I L P L+N K YD E R W
Sbjct: 741 VLKNVL-----------SQREYIHTLQPVWDELLNSERFKMKKAYDKMM-EADRVHWSGL 788
Query: 190 IWKQFIPPKFSFCTWLACKDRLSTLDNLSYID--TDPMCKLCKNELETAPHLFFMCTVTN 17
+ K P+ TWLAC RL T D L TD + LCK ET H+ F C V
Sbjct: 789 MRKNCARPRAIHTTWLACHGRLGTKDRLVRFGMITDKIWSLCKEVEETQNHILFSCKVAT 848
Query: 16 SLW 8
+W
Sbjct: 849 DIW 851
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 87.8 bits (216), Expect = 1e-15
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 10/189 (5%)
Frame = -3
Query: 538 PIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVHGFYLRN--QSIWTWNPRKDD 365
P EGGLG+R + NK K++W+ +LWV W+ +R +++ + R
Sbjct: 1123 PKSEGGLGLRSLVDANKICCFKLIWRLVSAKHSLWVNWIQNNLIRTVAEALSSHRRRSHR 1182
Query: 364 STLLKRICDIRDELTQKFGSQQAAIDALTPLVNDNG------LNSSKMYDIFRNEGPRHF 203
+L DI +EL +K + + L G S +++ R +G
Sbjct: 1183 DDILN---DIEEEL-EKLLCRGICTEQDRSLCRSIGGQFKAKFFSPEIWHQIREQGLVKQ 1238
Query: 202 WHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYID--TDPMCKLCKNELETAPHLFFMC 29
WH AIW PKF+F +WLA DRL+T D ++ + +C LC E+ HLFF C
Sbjct: 1239 WHKAIWFSGATPKFTFISWLAAHDRLTTGDKMASWNRGISSVCVLCNISAESRDHLFFSC 1298
Query: 28 TVTNSLWCR 2
++ +W R
Sbjct: 1299 NFSSHIWDR 1307
>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
Length = 514
Score = 81.3 bits (199), Expect = 1e-13
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 3/180 (1%)
Frame = -3
Query: 538 PIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVHGFYLRNQSIWTWNPRKDDST 359
P GGL + ++ WN + K LW + LWV+W+H ++L+ ++ + + + +
Sbjct: 342 PARCGGLNLINLELWNVTAMLKCLWNICSKEDNLWVKWIHAYFLKGDNVMSATIKSNSTW 401
Query: 358 LLKRICDIRDELTQKFGSQQAAIDALTPLVNDNGLNSSKMYDIFRNEGPRHFWHNAIWKQ 179
+LK + R ++ Q I+ ++ + ++Y + + W +
Sbjct: 402 ILKSVMKQRPQVN---NLQLVWIE----MLRKRKFSMKQVYMELVEDHNKIDWFRLLRYN 454
Query: 178 FIPPKFSFCTWLACKDRLST---LDNLSYIDTDPMCKLCKNELETAPHLFFMCTVTNSLW 8
P+ + WLAC++RL+T L N++ I +C LCK + E HL F C VT ++W
Sbjct: 455 RARPRANVTLWLACQNRLATKTRLKNMNMIQCS-LCSLCKEQDEDLDHLMFSCRVTKAIW 513
>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 316
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/75 (46%), Positives = 47/75 (62%)
Frame = -3
Query: 538 PIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVHGFYLRNQSIWTWNPRKDDST 359
P +EGGLG+ ++ WN ALLS ILW FH ++L VRWVH +Y R W +N +S
Sbjct: 224 PKQEGGLGLFNLKDWNLALLSHILWDFHCKKDSLRVRWVHHYYFRRSDEWNYNISSSNSV 283
Query: 358 LLKRICDIRDELTQK 314
L+K+I IRD + K
Sbjct: 284 LIKKIIQIRDFIISK 298
>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
Length = 303
Score = 71.6 bits (174), Expect = 1e-10
Identities = 39/105 (37%), Positives = 55/105 (52%)
Frame = -3
Query: 538 PIEEGGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVHGFYLRNQSIWTWNPRKDDST 359
P EGGLG+ ++ WN ALLS ILW FH ++L WVH +Y R +W +N S
Sbjct: 191 PKREGGLGLFNLKDWNLALLSCILWDFHCKKDSL---WVHHYYFRRSDVWNYNTSSSYSV 247
Query: 358 LLKRICDIRDELTQKFGSQQAAIDALTPLVNDNGLNSSKMYDIFR 224
L+K+I IRD + K S + A + + L K+Y+ R
Sbjct: 248 LIKKIIQIRDFIISKELSTEEAKKRIQSWRTNGQLLVGKVYEYIR 292
>gb|EEC70571.1| hypothetical protein OsI_01753 [Oryza sativa Indica Group]
Length = 395
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/94 (39%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = -3
Query: 283 LTPLVNDNGLNSSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNL- 107
L+PL L + +Y HN IWK PPKF F WL KDRL T NL
Sbjct: 204 LSPLSQQGDLTTRGIYHTLLPPSETDPVHNFIWKNASPPKFKFFAWLLSKDRLPTAKNLF 263
Query: 106 -SYIDTDPMCKLCKNELETAPHLFFMCTVTNSLW 8
I P C +C+ ET+ HLFFMC + W
Sbjct: 264 TKIILQSPQCAICQTGEETSNHLFFMCPFATAFW 297
>emb|CAN69470.1| hypothetical protein VITISV_014371 [Vitis vinifera]
Length = 492
Score = 70.9 bits (172), Expect = 2e-10
Identities = 54/184 (29%), Positives = 77/184 (41%), Gaps = 9/184 (4%)
Frame = -3
Query: 532 EEGGLGIRDVYAWNKALLSKILWKFHQGTETLW----VRWVHGFYLRNQSIWTWNPRKDD 365
+EGGLGIR + +NKAL K LW+F E+LW RWV + ++ +W R +
Sbjct: 185 KEGGLGIRSLATFNKALHGKWLWRFANENESLWKQIIFRWVAEAWEEDEGGDSWGLRFNR 244
Query: 364 STLLKRICDIRDELTQ--KFGSQQAAIDALTPLVNDNGLNSSK-MYDIFRNEGPRHFWHN 194
+ ++ L++ ++ D N NG K Y F + F
Sbjct: 245 HLNDWEVGEVESLLSKLHPLTIRRGVEDLFRWKENKNGTFFVKSFYSSFSRDTKPPFPAR 304
Query: 193 AIWKQFIPPKFSFCTWLACKDRLSTLDNLSYI--DTDPMCKLCKNELETAPHLFFMCTVT 20
IW ++P + SF W A R+ T D L C LCK + ET HL C
Sbjct: 305 TIWTPWVPIRASFFGWEAAWSRVLTTDRLKRFGWSIPNKCFLCKYKEETTNHLLLFCNKA 364
Query: 19 NSLW 8
LW
Sbjct: 365 RMLW 368
>gb|EAZ11749.1| hypothetical protein OsJ_01617 [Oryza sativa Japonica Group]
Length = 267
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/94 (39%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = -3
Query: 283 LTPLVNDNGLNSSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNL- 107
L+PL L + ++Y HN IWK PPKF F WL KDRLST NL
Sbjct: 76 LSPLSQQGDLTTREIYHTLLPPSETDLVHNFIWKNASPPKFKFFAWLLSKDRLSTAKNLF 135
Query: 106 -SYIDTDPMCKLCKNELETAPHLFFMCTVTNSLW 8
I P C + + ET+ HLFFMC + W
Sbjct: 136 TKIILQSPQCAIRQTGEETSNHLFFMCPFATAFW 169
>gb|AAF79677.1|AC022314_18 F9C16.26 [Arabidopsis thaliana]
Length = 1902
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/106 (33%), Positives = 53/106 (50%)
Frame = -3
Query: 526 GGLGIRDVYAWNKALLSKILWKFHQGTETLWVRWVHGFYLRNQSIWTWNPRKDDSTLLKR 347
GGLG+RD+ AWNK L K++W +LWV WV +RN++ W NP S +L+R
Sbjct: 1557 GGLGLRDLVAWNKVLALKLIWMLFTAASSLWVSWVRVNLIRNKNFWYLNPSFSGSWILRR 1616
Query: 346 ICDIRDELTQKFGSQQAAIDALTPLVNDNGLNSSKMYDIFRNEGPR 209
+C +R L + F + DN + + D+ GP+
Sbjct: 1617 LCKLR-TLARPFIVCEVGSGVTANFWLDNWTSHGPLIDLTVPTGPQ 1661
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 67.8 bits (164), Expect = 2e-09
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = -3
Query: 226 RNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYID--TDPMCKLCKNELET 53
R + WH +W PKFSFC WLA ++RLST D + + T C C + +ET
Sbjct: 770 RTSSNQRAWHKGVWFAHATPKFSFCAWLAIRNRLSTGDRMMTWNNGTPTTCVFCSSPMET 829
Query: 52 APHLFFMCTVTNSLW 8
HLFF C ++ +W
Sbjct: 830 RDHLFFQCCYSSEIW 844
>gb|AAF81336.1|AC007767_16 Strong similarity to a putative non-LTR retroelement reverse
transcriptase At2g23880 gi|3738337 from Arabidopsis
thaliana BAC F27L4 gb|AC005170 [Arabidopsis thaliana]
Length = 206
Score = 67.0 bits (162), Expect = 3e-09
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = -3
Query: 226 RNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYID--TDPMCKLCKNELET 53
R + WH +W PKFSFC WLA ++RLS +D + + T C C + +ET
Sbjct: 57 RTSSNQRAWHTGVWFAHATPKFSFCAWLAVRNRLSMVDRMMTWNNGTPTTCVFCSSPMET 116
Query: 52 APHLFFMCTVTNSLW 8
HLFF C ++ +W
Sbjct: 117 RDHLFFQCHYSSEIW 131
>ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arabidopsis lyrata subsp.
lyrata] gi|297311371|gb|EFH41795.1| hypothetical protein
ARALYDRAFT_917542 [Arabidopsis lyrata subsp. lyrata]
Length = 227
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/86 (33%), Positives = 44/86 (51%)
Frame = -3
Query: 265 DNGLNSSKMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYIDTDP 86
D+ S +++ R + WHN++W P++SF WLA KD+LST + +
Sbjct: 60 DSSFTSRHTWNLLRKAKHKVLWHNSVWFPQRVPRYSFIVWLAVKDQLSTGTRMRAWGVEQ 119
Query: 85 MCKLCKNELETAPHLFFMCTVTNSLW 8
C C+ E+ HLFF C T S+W
Sbjct: 120 PCVFCRERDESRDHLFFACPFTYSIW 145
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 66.6 bits (161), Expect = 3e-09
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Frame = -3
Query: 406 RNQSIW-TWNPRKDDSTLLKRICDIRDELTQKFGSQQAAIDALTPL-----VNDNGLNSS 245
RN+++ W+ R+ +++ DI L QK+ ++ + T V ++
Sbjct: 388 RNKTVAEAWSNRRRRKHRTEQLNDIEAALNQKYQTRNLLREDATLWRGKGDVFKTSFSTK 447
Query: 244 KMYDIFRNEGPRHFWHNAIWKQFIPPKFSFCTWLACKDRLSTLDNLSYID--TDPMCKLC 71
++ R + W+ +W PK+ FCTWLA ++RLST + + +D C C
Sbjct: 448 DTWNQVRKKSNEVAWYKGVWFSHSTPKYQFCTWLALRNRLSTGYRMQLWNNGSDVKCTFC 507
Query: 70 KNELETAPHLFFMCTVTNSLW 8
+ET HLFF C+ +++W
Sbjct: 508 STSIETRDHLFFSCSYASAIW 528